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Temperature and Precipitaon as Lyme Disease Indicators in Massachuses Introducon Temperature and Precipitaon Data Methods Lyme disease data was obtained from the Massachuses Department of Public Health per a per- sonal communicaon with Dr. Al DeMaria of the Bureau of Infecous Diseases. The data dis- played is Massachuses Lyme disease incidence for 2014 by town/city. Incidence is calculated as new cases per 100,000 residents. Temperature and precipitaon data were retrieved from the Naonal Climac Data Center (NOAA) from the Global Historical Climatology Network. Summer is defined as June, July and August and winter is defined as December, January and February. Total monthly precipitaon is displayed in mm and monthly mean temperature is displayed in degrees Celsius. Data Sources Temperature and precipitaon data were divided into tables according to season and year (ex. summer precipitaon 2012). The staons where these measurements were taken were ploed using XY coordinates onto a base map of Massachuses towns using GCS NAD 1983 and projected to NAD 1983 Massachuses StatePlane. Staons missing temperature or precipitaon measurements were removed. The resulng stra- fied temperature and precipitaon data were then interpolated using IDW to display temperature and precipitaon across Massachuses for each selected me period. Zonal stascs were run on the resulng rasters using the “TOWNS” field from the Massachuses Towns layer to calculate the mean raster value for each town (temperature or precipitaon). The extracted zonal stascs were exported into SPSS with 2014 Lyme disease incidence rate for each town. Towns with no Lyme disease data were removed. Spearman’s correlaon tests were run for each of the 8 categories comparing the weather variables 2014 Lyme disease incidence to see if any of them were correlated with Lyme disease incidence across Massachuses. Results The data were analyzed in SPSS with a Spearman’s correlaon to determine which, if any, of the 2012 or 2013 weather variables may be correlated with Lyme disease incidence in 2014. Based on the resulng outputs in SPSS, summer precipitaon 2012, summer tempera- ture 2012, winter temperature 2012, winter temperature 2013 and winter precipitaon 2013 were correlated with 2014 Lyme disease incidence where significance is p<.01. Summer Precipitaon 2012 p= .010, r 2 =.024 Summer Temperature 2012 p= .000000015, r 2 =.113 Winter Temperature 2012 p = .000000000008256, r 2 =.161 Winter Temperature 2013 p= .000000002, r 2 =.126 Winter Precipitaon 2013 p= .00000000000798, r 2 =.160 Lyme disease is the most common vector-borne disease in the United States, most frequently found in the Northeastern and mid-Atlanc U.S (Subak, 2002). It is caused by the spirochete, Borre- lia burgdorferi, and is transmied in New England and the mid-Atlanc by Ixodes scapularis , com- monly known as the black-legged ck (Shapiro and Gerber, 2000). I. scapularis has a two year life cycle consisng of 3 different stages: larvae, nymph, and adult. Larvae, predominant during the summer months, feed almost exclusively on the white-footed mouse, Peromyscus leucopus , a natural reservoir of B. burgdorferi (Shapiro and Gerber, 2000). Lar- vae are most likely to become infected with B. burgdorferi aſter feeding on P. leucopus. Nymphs emerge the following spring and connue to feed throughout the summer. Humans are most likely to get Lyme disease from nymph cks because of their small size, making it difficult to idenfy and remove the ck before it transmits B. burgdorferi (Tilly et al, 2008). Adult cks emerge in the fall, feed on white-tailed deer and lay their eggs in the spring thus re-starng the 2 year life cycle. Given the mulple vector, reservoir, host and environment interacons needed for Lyme disease to occur, several environmental factors have been examined in relaon to regional or annual Lyme disease variability. Weather variability, such as fluctuaons in precipitaon and temperature, is one proposed factor affecng Lyme disease incidence. Deer ck survival is parcularly influenced by hu- midity, requiring a relave humidity of 90% or higher (Oseld and Brunner, 2015). A study conduct- ed in Illinois found that ck density and infecon rates were associated with total precipitaon (Jones, 2000). In addion to precipitaon being a possible factor, several studies have suggested that temperature might also have an effect on Lyme disease. Cold winters can decrease the white- footed mouse populaon, which could reduce the number of ck larvae that become infected. Subak’s study in several Lyme endemic states found that summer moisture two years prior and win- ter temperature one year prior were significantly correlated with Lyme disease incidence. Based on the evidence from prior studies of temperature and precipitaon as possible indica- tors for Lyme disease variability between states, this spaal analysis was designed to examine these factors as a possible explanaon for town-level variability in Lyme disease incidence across Massa- chuses, a Lyme-endemic state. This analysis examined temperature and precipitaon from summer and winter of 2012 and 2013 in relaon to 2014 Lyme disease incidence by town in Massachuses. While the p values for all 5 of these weather variables are highly significant (where significance is p<.01), the r 2 values, the coefficients of determinaon, are quite small meaning only 2% (summer precipitaon 2012) to 16.1% (winter precipitaon 2013) of the variance in Lyme disease incidence is explained by its relaonship with the above weather variables. These small r 2 values indicate weak correlaon of these weather variables as indicators for Lyme disease incidence. This study has several limitaons. One of the major limitaons of this analysis is the small and uneven number of measurement points from which temperature and precipitaon data were inter- polated. More measurement staons more evenly distributed would increase the accuracy of the in- terpolaon across the state. It is also possible that total precipitaon is not the best measure for moisture in this case and perhaps the Palmer Hydrological Drought Index might be a more specific measurement for future studies. This study examined annual incidence for Lyme disease rather than looking specifically at summer onset cases. It is possible that there might be more of a correlaon between these weather factors and summer onset cases specifically. Conclusions and Limitaons Cartographer: Aislinn Cook Fall 2015 CEE187: Geographical Informaon System Geographic Coordinate System: GCS_North_American_1983 Projected Coordinate System: NAD_1983_StatePlane_Massachuses_Mainland_FIPS_2001

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Temperature and Precipitation as Lyme Disease Indicators in Massachusetts

Introduction Temperature and Precipitation Data

Methods

Lyme disease data was obtained from the Massachusetts Department of Public Health per a per-

sonal communication with Dr. Al DeMaria of the Bureau of Infectious Diseases. The data dis-

played is Massachusetts Lyme disease incidence for 2014 by town/city. Incidence is calculated as

new cases per 100,000 residents. Temperature and precipitation data were retrieved from the

National Climatic Data Center (NOAA) from the Global Historical Climatology Network. Summer is

defined as June, July and August and winter is defined as December, January and February. Total

monthly precipitation is displayed in mm and monthly mean temperature is displayed in degrees

Celsius.

Data Sources

Temperature and precipitation data were divided into tables according to season and year (ex.

summer precipitation 2012). The stations where these measurements were taken were plotted using

XY coordinates onto a base map of Massachusetts towns using GCS NAD 1983 and projected to NAD

1983 Massachusetts StatePlane.

Stations missing temperature or precipitation measurements were removed. The resulting strati-

fied temperature and precipitation data were then interpolated using IDW to display temperature

and precipitation across Massachusetts for each selected time period. Zonal statistics were run on

the resulting rasters using the “TOWNS” field from the Massachusetts Towns layer to calculate the

mean raster value for each town (temperature or precipitation).

The extracted zonal statistics were exported into SPSS with 2014 Lyme disease incidence rate for

each town. Towns with no Lyme disease data were removed. Spearman’s correlation tests were run

for each of the 8 categories comparing the weather variables 2014 Lyme disease incidence to see if

any of them were correlated with Lyme disease incidence across Massachusetts.

Results

The data were analyzed in SPSS with a

Spearman’s correlation to determine which, if

any, of the 2012 or 2013 weather variables may

be correlated with Lyme disease incidence in

2014. Based on the resulting outputs in SPSS,

summer precipitation 2012, summer tempera-

ture 2012, winter temperature 2012, winter

temperature 2013 and winter precipitation

2013 were correlated with 2014 Lyme disease

incidence where significance is p<.01.

Summer Precipitation 2012 p= .010, r2=.024 Summer Temperature 2012 p= .000000015, r2=.113

Winter Temperature 2012 p = .000000000008256, r2=.161 Winter Temperature 2013 p= .000000002, r2=.126

Winter Precipitation 2013 p= .00000000000798, r2=.160

Lyme disease is the most common vector-borne disease in the United States, most frequently

found in the Northeastern and mid-Atlantic U.S (Subak, 2002). It is caused by the spirochete, Borre-

lia burgdorferi, and is transmitted in New England and the mid-Atlantic by Ixodes scapularis, com-

monly known as the black-legged tick (Shapiro and Gerber, 2000).

I. scapularis has a two year life cycle consisting of 3 different stages: larvae, nymph, and adult.

Larvae, predominant during the summer months, feed almost exclusively on the white-footed

mouse, Peromyscus leucopus, a natural reservoir of B. burgdorferi (Shapiro and Gerber, 2000). Lar-

vae are most likely to become infected with B. burgdorferi after feeding on P. leucopus. Nymphs

emerge the following spring and continue to feed throughout the summer. Humans are most likely

to get Lyme disease from nymph ticks because of their small size, making it difficult to identify and

remove the tick before it transmits B. burgdorferi (Tilly et al, 2008). Adult ticks emerge in the fall,

feed on white-tailed deer and lay their eggs in the spring thus re-starting the 2 year life cycle.

Given the multiple vector, reservoir, host and environment interactions needed for Lyme disease

to occur, several environmental factors have been examined in relation to regional or annual Lyme

disease variability. Weather variability, such as fluctuations in precipitation and temperature, is one

proposed factor affecting Lyme disease incidence. Deer tick survival is particularly influenced by hu-

midity, requiring a relative humidity of 90% or higher (Ostfeld and Brunner, 2015). A study conduct-

ed in Illinois found that tick density and infection rates were associated with total precipitation

(Jones, 2000). In addition to precipitation being a possible factor, several studies have suggested

that temperature might also have an effect on Lyme disease. Cold winters can decrease the white-

footed mouse population, which could reduce the number of tick larvae that become infected.

Subak’s study in several Lyme endemic states found that summer moisture two years prior and win-

ter temperature one year prior were significantly correlated with Lyme disease incidence.

Based on the evidence from prior studies of temperature and precipitation as possible indica-

tors for Lyme disease variability between states, this spatial analysis was designed to examine these

factors as a possible explanation for town-level variability in Lyme disease incidence across Massa-

chusetts, a Lyme-endemic state. This analysis examined temperature and precipitation from summer

and winter of 2012 and 2013 in relation to 2014 Lyme disease incidence by town in Massachusetts.

While the p values for all 5 of these weather variables are highly significant (where significance is

p<.01), the r2 values, the coefficients of determination, are quite small meaning only 2% (summer

precipitation 2012) to 16.1% (winter precipitation 2013) of the variance in Lyme disease incidence is

explained by its relationship with the above weather variables. These small r2 values indicate weak

correlation of these weather variables as indicators for Lyme disease incidence.

This study has several limitations. One of the major limitations of this analysis is the small and

uneven number of measurement points from which temperature and precipitation data were inter-

polated. More measurement stations more evenly distributed would increase the accuracy of the in-

terpolation across the state. It is also possible that total precipitation is not the best measure for

moisture in this case and perhaps the Palmer Hydrological Drought Index might be a more specific

measurement for future studies. This study examined annual incidence for Lyme disease rather than

looking specifically at summer onset cases. It is possible that there might be more of a correlation

between these weather factors and summer onset cases specifically.

Conclusions and Limitations

Cartographer: Aislinn Cook

Fall 2015

CEE187: Geographical Information System

Geographic Coordinate System:

GCS_North_American_1983

Projected Coordinate System:

NAD_1983_StatePlane_Massachusetts_Mainland_FIPS_2001