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Courant 08 Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of Human Bone Models D. Bindel Courant Institute for Mathematical Sciences New York University Biomath Lunch Seminar, 1 Apr 2008

Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

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Page 1: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Finite Element Analysis of Human BoneModels

D. Bindel

Courant Institute for Mathematical SciencesNew York University

Biomath Lunch Seminar, 1 Apr 2008

Page 2: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Outline

1 Bone basics

2 Bone measurement and modeling

3 BoneFEA software

4 Conclusion

Page 3: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Outline

1 Bone basics

2 Bone measurement and modeling

3 BoneFEA software

4 Conclusion

Page 4: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Why study bones?

Osteoporosis: 44M Americans, $17B / year> 55% of over 50 have osteoporosis or low bone mass350K hip fractures / year; over $10B / yearA quarter of hip fracture patients die within a year... and we’re getting older

Page 5: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Bone basics: macrostructure

Page 6: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Bone basics: microstructure

Page 7: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Bone basics: microstructure

Page 8: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Bone basics: trabecular microstructure

Page 9: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Bone basics: trabecular microstructure

(Scans from 23 and 85 year old females)

Page 10: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Bone basics: orientation and remodeling

Page 11: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Why study bones?

... because bone is a fascinating material!

Structurally complicated across length scalesStructure adapts to loads and changes over timeinhomogeneous, anisotropic, asymmetric, oftennonlinear

Page 12: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Outline

1 Bone basics

2 Bone measurement and modeling

3 BoneFEA software

4 Conclusion

Page 13: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Bone measurement

Diagnostic for osteoporosis: T-scores from DXAOrdinary microscopy on extracted coresQCT software: density profile, about 3 mm scaleMicro-CT and micro-MRI: O(10 micron)

Page 14: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Micro-FE bone modeling

One vertebrate = 57M+ elements at 40 microns

Page 15: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Whole bone modeling

Density only weakly predicts strengthWanted: Good effective constitutive relation

Page 16: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Difficulties

Bone is:Variable over time and between individualsInhomogeneous and anisotropicDifferent in tension and compression

Page 17: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Yielding and nonlinearity

Example difficulty:Trabecular network has beam and plate elementsSmall macro strains yield much larger micro strainsSmall-scale geometric nonlinearity a significant effect

Page 18: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Yielding and nonlinearity

Page 19: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

An approach

Micro-CT structure scans for orientationUse orientation indices + density to approximatematerial parametersProceed phenomenologically

Page 20: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Outline

1 Bone basics

2 Bone measurement and modeling

3 BoneFEA software

4 Conclusion

Page 21: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Diagnostic toolchain

Micro-CT scan data from patientInference of material propertiesConstruction of coarse FE model (voxels)Simulation under loadingOutput of stress fields, displacements, etc.

Page 22: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

BoneFEA

Standard displacement-based finite element codeElastic and plastic material models (includinganisotropy and asymmetric yield surfaces)High-level: incremental load control loop,Newton-Krylov solvers with line search for nonlinearsystemsLibrary of (fairly simple) preconditioners; default is atwo-level geometric multigrid preconditioner

Page 23: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Example analysis loop

mesh:rigid(mesh:numnp()-1, {z=’min’},function()return ’uuuuuu’, 0, 0, bound_disp

end)

pc = simple_msm_pc(mesh,20)mesh:set_cg{M=pc, tol=1e-6, max_iter=1000}for j=1,n dobound_disp = 0.2*jmesh:step()mesh:newton{max_iter=6, Rtol=1e-4}

end

Page 24: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Example analyses

Page 25: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Outline

1 Bone basics

2 Bone measurement and modeling

3 BoneFEA software

4 Conclusion

Page 26: Finite Element Analysis of Human Bone Modelsbindel/present/2008-04-courant.pdf · Bone basics Bone measurement and modeling BoneFEA software Conclusion Finite Element Analysis of

Courant 08

Bone basics

Bonemeasurementand modeling

BoneFEAsoftware

Conclusion

Conclusion

Bones are interesting as well as important!Initial BoneFEA work done, in use by ON DiagnosticsPossible follow-up work for diagnostic toolPlenty of interesting research directions