40
St. Louis, Missouri, USA ARABIDOPSIS RESEARCH IN 2017 & BEYOND From Basic Discovery to Translation June 19-23 The 28th International Conference on Arabidopsis Research

ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

  • Upload
    others

  • View
    2

  • Download
    0

Embed Size (px)

Citation preview

Page 1: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

St. Louis, Missouri, USA

ARABIDOPSIS R E S E A R C HIN 2017 & BEYOND

From Basic Discovery to Translation 

June 19-23

The 28th International Conference on Arabidopsis Research

Page 2: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource
Page 3: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

CONFERENCE PROGRAM

Hyatt Regency at the Arch

ARABIDOPSISRESEARCHIN 2017 & BEYOND

Page 4: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Organizing Committees and Hosts for the 28th International Conference on Arabidopsis ResearchCo-Chairs

Doris Wagner University of Pennsylvania, USA1,2

Rick Vierstra Washington University in St. Louis, USA1

Lead Organizer

Joanna Friesner University of California, Davis, USA3

Scientific Organizing Committee Members

Sarah Assmann Pennsylvania State University, USA1

Erich Grotewold Ohio State University, USA1

Elizabeth Haswell Washington University, St. Louis, USA1,2

Jose Dinneny Carnegie Institution for Science, USA1

Peter McCourt University of Toronto, Canada1

Roger Innes Indiana University, USA1

Siobhan Brady University of California, Davis, USA - past NAASC1 Member of the North American Arabidopsis Steering Committee 2 Co-chair of the Multinational Arabidopsis Steering Committee 3 Coordinator of the North American Arabidopsis Steering Committee

Local Organizing Committee, Danforth Center, St. Louis, Missouri

Blake Meyers James Carrington Malia Gehan Noah Fahlgren Tam McGuire

Page 5: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

TABLE OF CONTENTSProgram Overview 5

Meeting Sponsors and Exhibitors 7-8

Conference Program 9

Keynote Lectures 17

Workshop Descriptions 18

Posters and Talks: List of Abstracts 21

General Meeting Information 32

• Transportation to Hyatt and Airport (public transit, metro, shuttle, taxi)

• Transportation to the WashU dorms, and from dorms to conference, and dorm contact information

• Registration desk hours at the Hyatt Regency, St. Louis at the Arch

• What is included in your registration• Name badge requirement and separately ticketed

activities• Opening Keynote Lecture and Welcome Reception • Conference Party with live music and dancing• Oral presentation guidelines and loading talks

onto conference laptops• Schedule for speakers to load talks onto

conference laptops

• Poster session and Exhibition hours • Coffee/Teabreakscheduleduringtheconference• Responsibility of the Organizing Committee• Internet access at the conference• Social activities at ICAR 2017 including Danforth

Center Open House and Party• Restaurants/Eateriesat,andnear,theconferencesite• Hyatt business, shipping, printing and photocopying

services• Parking near the Hyatt• Hyatt general information• Campus residence hall lodging at Washington

University, St. Louis (“WashU”)• Childcare option• Emergency Telephone Number- 911

Exhibitor Floor Plan 36

Page 6: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

4

Page 7: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

MONDAY, JUNE 19, 2017

1:30 - 3:00 pm3:30 - 4:30 pm5:00 - 6:00 pm6:30 - 7:30 pm7:30 - 9:30 pm

Early Career Panel and Discussion: “Careers Beyond Academia” Plenary I: Hormone Signaling Plenary II: Biotic InteractionsOfficialOpeningandKeynoteLecture1:SabeehaMerchant Opening Reception

TUESDAY, JUNE 20, 2017

9:00 - 10:30 am11:00 - 12:30 pm

2:00 - 3:30 pm4:00 - 5:30 pm5:45 - 6:45 pm7:00 - 8:00 pm

8:00 - 10:30 pm9:00 - 10:30 pm

Plenary III: Cell and Developmental Biology Plenary IV: Abiotic Interactions Concurrent 1: Epigenetics and Chromatin OR Concurrent 2: Plant Defense and Biotic InteractionsConcurrent 3: Cell and Developmental Biology 1 OR Concurrent 4: Post-Translational RegulationCommunity Organized Workshops 1 Keynote Lecture 2: Mary Lou GuerinotPoster Session 1 and Opening Exhibit Reception (Odd-Numbered Abstracts Present 8:00-9:00 pm)Open browsing of posters and exhibit booths

WEDNESDAY, JUNE 21, 2017

7:00 – 8:00 am9:00 - 11:00 am

11:30 - 12:30 pm12:30 pm - on4:15 - 6:30 pm

6:30 - 10:30 pm

(optionalactivity)“WeedStampede”5KFunRun/Walk;MeetinHyattLobby,7amPlenary V: Modeling, Gene Regulation, Systems, Quantitative, and Computational Biology Plenary VI: Natural Variation, Evolution, and Ecology FreeAfternoon/Evening(PriortooptionalDanforthCenterevents)Danforth Center- ticketed event: “Careers in Industry” panel and networking socialDanforthCenter-ticketedevent:OfficialICAR2017party,dinner,anddancing

THURSDAY, JUNE 22, 2017

9:00 - 10:30 am11:00 - 12:30 pm

2:00 - 3:30 pm4:00 - 5:30 pm5:45 - 6:45 pm7:00 - 8:00 pm8:00 - 9:30 pm9:00 - 9:45 pm

9:45 - 10:30 pm

Plenary VII: Epigenetics and Chromatin Concurrent 5: Cell and Developmental Biology 2 OR Concurrent 6: Translational Biology Concurrent 7: Natural Variation, Ecology, Evolution 1 OR Concurrent 8: Hormone SignalingConcurrent 9: Structural Biology OR Concurrent 10: Abiotic InteractionsCommunity Organized Workshops 2 Keynote Lecture 3: Keiko ToriiPoster Session 2, Exhibit Session (Even-Numbered Abstracts Present 8:00-9:00 pm)Open browsing of posters and exhibit boothsTake down posters and dismantle exhibit booths

FRIDAY, JUNE 23, 2017

9:00 - 10:30 am11:00 - 12:00 pm12:00 - 12:30 pm

Plenary VIII: Novel Approaches Keynote Lecture 4: Sheng Yang HeClosing Remarks, and ICAR 2018 Announcement

PROGRAM OVERVIEW

Throughout this program, the numbers next to abstracts refer to abstract numbers, not page numbers, in the abstract book provided on USB drives. All abstract titles are also listed in the ‘Posters and Talks’ section of this program starting on page 21.

5

Page 8: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource
Page 9: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

GENERAL CONFERENCE SPONSORSICAR 2017 was made possible through the generous support of these groups

GOLD MEETING SPONSORS

DELEGATE BAG SPONSOREXHIBITOR, SPONSOR: ABIOTIC STRESS PLENARY SESSION

CAREERS WORKSHOP, TRAVEL AWARD SPONSOR, EXHIBITOR

CONFERENCE PARTICIPANT SUPPORT

U.S. National Science Foundation

GENERAL MEETING SPONSOR

ORGANIZING COMMITTEE

LOCAL HOST, SITE OF THE CONFERENCE PARTY

Monsanto Women in Science Exchange

7

Page 10: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Agrisera

Arabidopsis Biological Resource Center (ABRC)

ASPB

Berthold Technologies

BioChambers Incorporated

Conviron

Hybrigenics Services

LemnaTec

Monsanto

Nottingham Arabidopsis Stock Centre

PhytoAB Inc.

PhytoTechnology Laboratories

Plant Molecular Biology - Yale University

RIKEN- Center for Sustainable Resource Science

TAIR: The Arabidopsis Information Resource

International Association for Plant Biotechnology

WORKSHOP PARTICIPANT SUPPORT

PROGRAM DONOR

ADVERTISER

The Company of Biologists

www.biologists.com

ADDITIONAL CONFERENCE SPONSORS

CONFERENCE EXHIBITORS

PROGRAM SPONSOR’WEED STAMPEDE’ 5K FUN RUN/WALK SPONSOR

WORKSHOP SPONSOR AND EXHIBITOR

WORKSHOP SPONSOR AND EXHIBITOR

Missouri Transect: Plants, Climate and Community Missouri EPSCoR

8

Page 11: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Posters can be set up starting Monday 12:00 pm/1200 hours;all posters will remain up through Thursday, 10 pm/2200 hours. TheycanalsobepostedTuesdayat8am/0800,andmustbeinplacebyTuesdayat12pm/1200hours(Location:GrandBallroomABCD, 4th floor.) There will be two formal poster sessions, Tuesday and Thursday evenings. At each, half the posters will be presented for the first hour, with poster presenters standing next to their poster to talk with attendees. The second hour of the poster sessions is open time for all attendees to browse posters, and talk to exhibitors. There are also informal poster and exhibitor sessionsduringlunchonTuesdayandThursday;presentersarenot required to stand by posters at lunchtimes. To determine when you should stand next to your poster, find your abstract in this book and note the new abstract number. Abstracts are grouped by topic. Scan the abstract list, starting on page 21, to find your Session and new number. The new number is your poster number (if you are presenting a poster) and it is also your oral presentation number (if applicable.)

ICAR 2017 PROGRAM OVERVIEW - Poster schedule

MONDAY, JUNE 19, 201712-8:30 pm Registration Open Grand Ballroom Coatroom, 4th Floor

12-8:30 pm Poster Set-up Grand Ballroom ABCD, 4th Floor

12-7:30 pm Exhibitor Set-up Grand Ballroom ABCD, 4th Floor

1:30-3 pm Careers Beyond the Academy. Panel Presentation and Discussion* Park View Room, 4th Floor

3-3:30 pm Coffee and Tea Break Grand Foyer, 4th Floor

3:30-4:30 pm Plenary 1: Hormone SignalingSession Chair: Rick Vierstra, NAASC and Washington University in St. Louis

Grand Ballroom EFGH, 4th Floor

3:30-4 pm Abstract #1: Translation regulation of plant hormone responses. Jose M. Alonso, North Carolina State University, USA

4-4:30 pm Abstract #2: Regulation of Auxin Response Factors. Lucia Strader, Washington University in St. Louis, USA

4:30-5 pm Coffee and Tea Break Grand Foyer, 4th Floor

5-6 pm Plenary 2: Biotic InteractionsSession Chair: Roger Innes, NAASC and Indiana University

Grand Ballroom EFGH, 4th Floor

5-5:30 pm Abstract not submitted: Functions of the root microbiota in plant nutrition. Paul Schulze-Lefert, Max Planck Institute for Plant Breeding Research, Cologne, Germany

5:30-6 pm Abstract #3: Structures and processes impacting on the microbial colonisation of plants. Sebastian Schornack, University of Cambridge, Sainsbury Laboratory (SLCU), United Kingdom

6-6:20 pm Break before Conference Welcome and Keynote Lecture 1

6:30-6:45 pm ICAR 2017 WelcomeNAASC ICAR Co-chairs: Doris Wagner, University of Pennsylvania, and Rick Vierstra, Washington University in St. Louis

Grand Ballroom EFGH, 4th Floor

6:45-7:30 pm Keynote Lecture 1. Session Chair: Doris Wagner, ICAR 2017 Co-Chair Abstract #4: A day in the life of Chlamydomonas. Sabeeha Merchant, University of California, Los Angeles, USA

Grand Ballroom EFGH, 4th Floor

7:30-9:30 pm ICAR 2017 Welcome Reception Grand Ballroom ABCD and Foyer, 4th Floor

*ticketed event, ticket purchased in advance at registration website

All posters with ODD numbers will be presented on Tuesday eveningfrom8:00pm/2000-9:00pm/2100 All posters with EVEN numbers will be presented on Thursday eveningfrom8:00pm/2000-9:00pm/2100 The remaining time in the poster sessions can be used to present your poster longer, or go browse other posters and visit exhibit booths.ALL POSTERS MUST BE TAKEN DOWN THURSDAY JUNE 22, NO LATERTHAN10:30PM/2230HOURS. If not removed by 10:30 pm they will be discarded by hotel staff.Note:TheposterandexhibithallopensTuesday-Thursday;8am/0800andclosesatvarioustimes(consultprogram).Open browsing of all posters is encouraged before and after the presentation times, including during lunch on Tuesday and Thursday.

9

Page 12: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

TUESDAY, JUNE 20, 20178 am-12 pm Poster Set-Up Continues to Noon Grand Ballroom ABCD, 4th Fl

8 am-6:30 pm Registration Open Grand Coatroom, 4th Floor

9-10:30 am Plenary 3: Cell and Developmental BiologySession Chair: Elizabeth Haswell, NAASC and Washington University in St. Louis

Grand EFGH, 4th Floor

9-9:30 am Abstract #5: Tending the Microtubule Garden: Pruners, Protectors and Growers. Ram Dixit, Washington University in St. Louis, USA

9:30-10 am Abstract not submitted: Explosive seed dispersal. Angela Hay, MPIPZ, Cologne, Germany

10-10:30 am Abstract #6: Endodermal differentiation - walking the thin line between protection and exchange. Niko Geldner, University of Lausanne, Switzerland

10:30-11 am Coffee and Tea Break Grand Foyer, 4th Floor

11 am-12:30 pm Plenary 4: Abiotic Interactions Session Chair: Jose Dinneny, NAASC and Carnegie Institution for ScienceSESSION GENEROUSLY SPONSORED BY RIKEN BRC (BioResource Center) and CSRS (Center for Sustainable Resource Science)

Grand EFGH, 4th Floor

11-11:30 am Abstract #7: Arabidopsis halleri – a model species to study local adaptation. Ute Kraemer, Ruhr University Bochum, Germany

11:30 am-12 pm Abstract #8: Fire, phosphate, friends, and foes: the evolution of karrikin and strigolactone signaling. David Nelson, University of California, Riverside, USA

12-12:30 pm Abstract not submitted: Temperature Sensing. Philip A. Wigge, University of Cambridge, United Kingdom

12:30-2 pm Lunch with Exhibitors and Informal Poster Browsing Grand ABCD and Foyer, 4th Fl

2-3:30 pm Concurrent Session 1: Epigenetics and ChromatinSession Chair: Francois Roudier, IBENS-RDP, France

Grand E, 4th Floor

2-2:25 pm Abstract # 9: Defining the transcriptional regulatory structure of plant genomes. Roger Deal, Emory University, USA

2:26-2:51 pm Abstract #10: The multiple facets of Polycomb Repressive Complexe 2. François Roudier, IBENS-RDP, France

2:52-3:02 pm Abstract #137: Cis- and trans-determinants of epigenetic silencing by Polycomb Repressive Complex 2 in Arabidopsis. Jun Xiao, University of Pennsylvania, USA

3:03-3:13 pm Abstract #139: Pol IV-dependent siRNAs from maternal somatic tissue are required for seed development. Rebecca Mosher, University of Arizona, USA

3:14-3:24 pm Abstract #146: From Chromatin to RNA: SDG8 regulates H3K36me3 and mRNA processing of gene regulatory networks underlying nutrient responses. Ying Li, Purdue University, USA

3:25-3:27 pm Oral Poster Abstract #136: The plant-specific histone residue Phe41 is important for genome-wide H3.1 distribution. Li Lu, University of Wisconsin, Madison, USA

3:28-3:30 pm Oral Poster Abstract #144: Genome-wide analysis of non-canonical RNA-directed DNA Methylation mechanisms. Kaushik Panda, The Ohio State University, USA

2-3:30 pm Concurrent Session 2: Plant Defense & Biotic InteractionsSession Chair: Silke Robatzek, The Sainsbury Laboratory, United Kingdom

Grand FGH, 4th Floor

2-2:25 pm Abstract not submitted: The plant microbiome at the intersection of metabolism and defence. Cara Haney, The University of British Columbia, Canada

10

Page 13: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

TUESDAY, JUNE 20, 20172:26-2:51 pm Abstract #11: How membrane trafficking regulates immunity. Silke Robatzek, The

Sainsbury Laboratory, United KingdomGrand FGH, 4th Floor

2:52-3:02 pm Abstract #247: Direct and indirect Epigenetic Regulation on plant NLRs expression through a chromatin remodeling protein. Chien Yu Huang, University of California, Riverside, USA

3:03-3:13 pm Abstract #251: Dual impact of elevated temperature on plant defense and bacterial virulence in Arabidopsis. Bethany Huot, Michigan State University, USA

3:14-3:24 pm Abstract #269: Role of Volatile Organic Compounds in Plant Symbiotic and Defense Signaling Pathways. Muthusubramanian Venkateshwaran, University of Wisconsin-Platteville, USA

3:25-3:27 pm Oral Poster Abstract #243: Extracellular vesicles isolated from the apoplast of Arabidopsis leaves carry stress-response proteins and microRNAs. Brian Rutter, Indiana University, USA

3:28-3:30 pm Oral Poster Abstract #260: The mutant increased suppression of TBF1-8 (ist8) offers new insight into posttranscriptional regulation of immune response in Arabidopsis. Paul Zwack, Duke University, USA

3:30-4 pm Coffee and Tea Break Grand Foyer, 4th Floor

4-5:30 pm Concurrent Session 3: Cell & Developmental Biology 1Session Chair: Kimberly L Gallagher, University of Pennsylvania, USA

Grand E, 4th Floor

4-4:25 pm Abstract #12: Closing the deal: Arabidopsis LORELEI is required for pollen tube reception by the female gametophyte. Ravi Palanivelu, University of Arizona, USA

4:26-4:51 pm Abstract #13: Symplastic regulation of root development. Kimberly L Gallagher, University of Pennsylvania, USA

4:52-5:02 pm Abstract #116: Chemical and physical signals in the control of early photomorphogenesis in Arabidopsis. Walia Ankit, The Sainsbury Laboratory, University of Cambridge, United Kingdom

5:03-5:13 pm Abstract #108: Molecular Requirements for MLO-Mediated Communication During Pollen Tube Reception. Daniel Jones, University of Oklahoma, USA

5:14-5:24 pm Abstract #117: PLK1, a receptor-like kinase, is required for root patterning and, in different cell types, localizes to distinct plasma membrane domains. Jaimie Van Norman, University of California, Riverside, USA

5:25-5:27 pm Oral Poster Abstract #84: Remodeling of the FtsZ Ring during Chloroplast Division in Arabidopsis Requires Activation of ARC3 by PARC6 at the Division Site. Cheng Chen, Department of Plant Biology, Michigan State University, USA

5:28-5:30 pm Oral Poster Abstract #94: AMP1 controls SAM integrity by limiting HD-ZIPIII transcription factor activity. Saiqi Yang, Technical University of Munich, Freising, Germany

4-5:30 pm Concurrent Session 4: Post-Translational Regulation Session Chair: Zhiyong Wang, Department of Plant Biology, Carnegie Institution for Science, USA

Grand FGH, 4th Floor

4-4:25 pm Abstract #14: Interplay between phosphorylation and ubiquitination in plant immune signaling. Jacqueline Monaghan, Queen’s University, Canada.

4:26-4:51 pm Abstract #15: Posttranslational mechanisms of sugar responses. Zhiyong Wang, Department of Plant Biology, Carnegie Institution for Science, USA

11

Page 14: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

TUESDAY, JUNE 20, 20174:52-5:02 pm Abstract #283: Disentangling protein degradation mechanisms of plant circadian

clocks. Joshua Gendron, Yale University, USAGrand FGH, 4th Floor

5:03-5:13 pm Abstract #284: The F-Box Protein-Mediated Proteolytic Regulation of Phenylpropanoid Metabolism. Chang-Jun Liu, Brookhaven National Laboratory, USA

5:14-5:24 pm Abstract #294: Mass Spectrometric Dissection of the SUMOylation System in Arabidopsis thaliana. Samuel York, Washington University in St. Louis, USA

5:25-5:27 pm OralPosterAbstract#289:DefiningtheO2/NOresponsiveN-endruledegradomeinArabidopsis. Gunjan Sharma, University of Nottingham, United Kingdom

5:28-5:30 pm Oral Poster Abstract #292: Mechanism of RNS-dependent S-Nitrosation and Denitrosation of Cytoplasmic S-Nitrosoglutathione Reductase (GSNOR) from Arabidopsis thaliana. Patrick Treffon, University of Massachusetts Amherst, USA

5:45-6:45 pm Community-Organized Workshops

1. Communicating your science to peers and beyond. Lead Organizer: Mary Williams, ASPB, with Ruth Bastow, Global Plant Council, and Ivan Baxter, Danforth Center

Park View, 4th Floor

2. Arabidopsis Breakthroughs with Chemistry- new techniques to think outside theboxwithChemistryandChemicalBiology.LeadOrganizer/Chair:RyoungShin,withDavidGifford,Dr.MinamiMatsui,andDirectorKazuoShinozaki;RIKENCenter for Sustainable Resource Science

Mills 3, 4th Floor

7-8 pm Keynote Lecture 2. Session Chair: Rick Vierstra, Washington University in St. Louis Abstract #16: Ionome to Genome: Tales of Gene Discovery. Mary Lou Guerinot, Dartmouth College, USA

Grand EFGH, 4th Floor

8-10:30 pm Exclusive Poster Session I/Exhibit Hall Opening Reception 8 – 9 pm: Odd # abstracts: stand by your poster to present your research9 pm: Odd # abstract presenters may stay at their poster or visit other posters & exhibitors

Grand ABCD and Foyer, 4th Floor

WEDNESDAY, JUNE 21, 20177-8 am Weed Stampede-5K Fun Run/Walk

Gateway Arch Riverfront, next to Hyatt, Sponsored by Nature PlantsMeeting location: Hyatt lobby (7am) or St. Louis Arch (7:10am)

8 am-11:30 am Registration Open Grand Ballroom Coatroom, 4th Floor

9 am-11 am Plenary 5: Modeling, Gene Regulation, Systems/Quantitative/Computational Biology Session Chair: Erich Grotewold, NAASC and the Ohio State University

Grand EFGH, 4th Floor

9-9:30 am Abstract #17: Towards a quantitative understanding of how signals drive cell fate decision-making at the shoot apical meristem. Teva Vernoux, ENS de Lyon, France

9:30-10 am Abstract #18: Hopeful monsters and plant synthetic biology. Jennifer Nemhauser, HHMI Faculty Scholar, University of Washington, USA

10-10:30 am Abstract #23: Systematic discovery of novel eukaryotic transcriptional regulators using non-sequence homology based prediction. Seung Yon (Sue) Rhee, Carnegie Institution for Science, USA

10:30-11 am Abstract #19: Topological features of a gene co-expression network predict patterns of natural diversity in environmental response. David L. Desmarais, Harvard University, USA

11-11:30 am Coffee and Tea Break Grand Foyer, 4th Floor

11:30 am-12:30 pm

Plenary 6: Natural Variation, Evolution and EcologySession Chair: Elizabeth Haswell, NAASC and Washington University in St. Louis

Grand EFGH, 4th Floor

12

Page 15: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

11:30 am-12 pm Abstract #20: Natural Variation Within And Among Species: Integrating Population Genomics and Comparative Genomics of Brassica and Relatives. J. Chris Pires, University of Missouri, USA

Grand EFGH, 4th Floor

12-12:30 pm Abstract #21: Using Natural Variation to Uncover the Genetic Basis of Root Traits in Arabidopsis. Wolfgang Busch, Salk Institute for Biological Studies, USA

12:30 pm - on Lunch on your own/Free Afternoon prior toOptional Conference Party and Open House, Hosted at the Danforth Center

4-10:30 pm Conference Events Hosted by the Danforth Center Danforth Plant Science Center4:15-6:30 pm ‘Careers in Industry’ Panel Discussion (4:15-5:30 pm) followed by Networking Social*

5:15 pm- on Tours (30 minutes) of the Danforth Center by local hosts. Tours have a limited group size,andtimeswillbeassignedinadvance;Toursarerestrictedtoticketholdersofeither the Industry Careers session or the Conference Party *

6:30 - 10:30 pm Official ICAR 2017 Conference Party with Live Music *The party will feature VO5, the famous nine-piece disco dance band, who will be performingliveandinspiringattendeestodance!Wearyourfavorite70’sflashbackclothes (optional) and enjoy the recently-renovated Danforth Center while you relax and party with friends. *ticketed event, ticket purchased in advance at registration website

THURSDAY, JUNE 22, 2017

8 am-6:30 pm Registration Open Grand Coatroom, 4th Floor

9-10:30 am Plenary 7: Epigenetics and Chromatin Session Chair: Doris Wagner, NAASC and University of Pennsylvania

Grand EFGH, 4th Floor

9-9:30 am Abstract #22: Epigenetic regulation of genome expression, environmental and developmental interaction. Xuehua Zhong, University of Wisconsin-Madison, USA

9:30-10 am Abstract #23: Epigenetic inheritance of DNA methylation patterns, Daniel Zilberman, John Innes Centre, Norwich, UK & University of California, Berkeley, USA

10-10:30 am Abstract #24: Insight of histone demethylases targeting in Arabidopsis. Xiaofeng Cao. IGDB, Chinese Academy of Sciences, China

10:30-11 am Coffee and Tea Break Grand Foyer, 4th Floor

11-12:30 pm Concurrent Session 5: Cell and Developmental Biology 2Session Chair: Adrienne Roeder, Cornell University, USA

Grand E, 4th Floor

11-11:03 am Presentation of the Herb Tabor Young Investigator Award by Joseph Jez, Associate Editor of the Journal for Biological Chemistry. Sponsored by JBC.

11:03-11:28 am Abstract not submitted: Tuning a molecular amplifier: molecular mechanisms of cytoskeletal reorganization in higher plants. David Ehrhardt, Carnegie Institution for Science, Stanford, USA

11:29-11:54 am Abstract #25: Spatiotemporal averaging of variable cell growth produces regular Arabidopsis sepals. Adrienne Roeder, Cornell University, USA

11:54 am-12:04 pm

Abstract #78: Rhamnose-containing cell wall polymers suppress helical plant growth independently of microtubule orientation. Adam Saffer, Yale University, USA

12:04-12:14 pm Abstract#77:DirectmetalsensingbytheIRT1transporter/receptororchestratesits degradation by endocytosis and plant metal nutrition. Greg Vert, I2BC, Gif-sur-Yvette, France

12:14-12:24 pm Abstract #102: The genetical origins of the fractal morphologies in cauliflower curds. Eugenio Azpeitia, INRIA, France

12:25-12:27 pm Oral Poster Abstract #76: RCBL: a novel phytochrome signaling component initiates chloroplast biogenesis. Emily Jie-Ning Yang, Duke University, USA

12:28-12:30 pm Oral Poster Abstract #82: Autocrine regulation of stomatal differentiation potential by EPF1 and ERECTA-LIKE1 ligand-receptor signaling. Xingyun Qi, University of Washington

13

Page 16: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

THURSDAY, JUNE 22, 201711-12:30 pm Concurrent Session 6: Translational Biology

Session Chair: Julia Bailey-Serres, University of California, Riverside, USAGrand FGH, 4th Floor

11-11:25 am Abstract #26: Manipulating heterotrimeric G-protein signaling to improve plant yield and stress tolerance. Sona Pandey, Donald Danforth Plant Science Center, St. Louis, MO, USA

11:26-11:51 am Abstract #27: Low oxygen and energy: Multi-scale gene regulatory responses in Arabidopsis and rice. Julia Bailey-Serres, University of California, Riverside, USA

11:52 am-12:02 pm

Abstract #313: Rapidly domesticating the new oilseed crop pennycress (Thlaspi arvense) by translating findings from Arabidopsis research. Michaela McGinn, Illinois State University, USA

12:03-12:13 pm Abstract #315: The Arabidopsis thaliana MYB transcription factor ETC2 confers higher yield and seed size in transgenic soybean (Glycine max). Wusheng Liu, University of Tennessee, Knoxville, USA

12:14-12:24 pm Abstract #318: Targeted phenylalanine in seedling development: coatings to reduce cellular stress (agriculture), and development of nutraceutical extracts (medicine). Katherine Warpeha, University of Illinois at Chicago, USA

12:25-12:27 pm Oral Poster Abstract #321: The origin and evolution of a sex chromosome pair in garden asparagus. Alex Harkess, Donald Danforth Plant Science Center, USA

12:28-12:30 pm Oral Poster Abstract #317: A tightly regulated genetic selection system with signaling-active alleles of phytochrome B. Wei Hu, University of California Davis, USA

12:30-2 pm Lunch with Exhibitors and Informal Poster Browsing Grand ABCD and Foyer, 4th Floor

2-3:30 pm Concurrent Session 7: Natural Variation, Ecology, and EvolutionSession Chair: Daniel Koenig, University of California, Riverside, USA

Grand Ballroom E, 4th Floor

2-2:25 pm Abstract #28: Mechanisms and evolution of imprinting in plants. Mary Gehring, Whitehead Institute for Biomedical Research, USA

2:26-2:51 pm Abstract not submitted: Long-term retention of genetic variation by natural selection. Daniel Koenig, University of California, Riverside, USA

2:52-3:02 pm Abstract #222: Multi-trait genome-wide association mapping reveals the genetic architecture of plant stress resistance. Manus Thoen, University of Chicago, USA

3:03-3:13 pm Abstract #223: The effect of structural variation on crossover positioning in Arabiopsis thaliana. Beth Rowan, University of California, Davis, USA

3:14-3:24 pm Abstract #226: Asymmetric evolution of transcription factor expression and regulation in Arabidopsis thaliana. Nicholas Panchy, Michigan State University, USA

3:25-3:27 pm Oral Poster Abstract #219: The evolution of gene regulatory networks confers stress tolerance within the Brassicaceae. Ying Sun, Stanford University, USA

3:28-3:30 pm Oral Poster Abstract #224: Understanding molecular variation in the RNA polymerase V Ago-binding platform. Joshua Trujillo, University of Arizona, USA

2-3:30 pm Concurrent Session 8: Hormone SignalingSession Chair: Ana Caño Delgado, Centre for Research in Agricultural Genomics (CRAG), Spain

Grand Ballroom FGH, 4th Floor

2-2:25 pm Abstract #29: Hormone metabolism and biased ligand signaling in plants, Jing-Ke Weng, Whitehead Institute and MIT, Cambridge, MA, USA

2:26-2:51 pm Abstract not submitted: Brassinosteroids as Emerging Hormones in Plant Adaptation. Ana Caño Delgado, Centre for Research in Agricultural Genomics (CRAG), Spain

2:52-3:02 pm Abstract #178: Making a spiral: the role of auxin signaling in shaping shoot architecture. Mallorie Taylor-Teeples, University of Washington, USA

3:03-3:13 pm Abstract #181: An Optimized Ribo-seq Library Preparation Method and Analysis Tool for Plants. Serina Mazzoni-Putman, North Carolina State University, USA

14

Page 17: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

THURSDAY, JUNE 22, 20173:14-3:24 pm Abstract #185: Network-Based Discovery of Brassinosteroid Regulation of Plant

Growth and Drought Responses in Arabidopsis. Yanhai Yin, Iowa State University, USA

Grand Ballroom FGH, 4th Floor

3:25-3:27 pm Oral Poster Abstract #191: Brassinosteroid regulation of vascular development: a cell-type-specific transcriptomic approach. Isabel Betegon, CRAG, Spain

3:28-3:30 pm Oral Poster Abstract #194: Identification of auxin pathway components in root system development using GWAS. Takehiko Ogura, GMI-Gregor Mendel Institute, Austria

3:30-4 pm Coffee and Tea Break Grand Foyer, 4th Floor

4-5:30 pm Concurrent Session 9: Structural Biology Session Chair: Michael Hothorn, University of Geneva, Switzerland

Grand Ballroom E, 4th Floor

4-4:20 pm Abstract #30: Molecular Controls in Plant Hormone Signaling. Joseph Jez, Washington University, St. Louis, MO, USA

4:20-4:40 pm Abstract #31: Inositol pyrophosphate signaling molecules control plant phosphate homeostasis by binding to SPX sensor domains. Michael Hothorn, University of Geneva, Switzerland

4:40-4:50 pm Abstract #302: Photosensing and Thermosensing by Phytochrome B Requires both Proximal and Distal Feature within the Dimeric Photoreceptor. Ernest Burgie, Washington University in St. Louis, USA

4:50-5 pm Abstract #303: Mechanistic insights into floral shedding. Julia Santiago, University of Lausanne, Switzerland.

5-5:10 pm Abstract #304: An Arabidopsis MUB E2 Structure Reveals New Regulatory Opportunities in the Ubiquitin System. Brian Downes, St. Louis University, USA

5:10-5:20 pm Abstract #306: Signaling mechanism of UV-B photoreceptor from Arabidopsis. Xiaojing Yang, University of Illinois at Chicago, USA

5:20-5:30 pm Abstract #305: Evolutionary conservation of structure and function in the plant aldehyde dehydrogenase 12 family. David Korasick, University of Missouri-Columbia, USA

4-5:30 pm Concurrent Session 10: Abiotic Interactions Session Chair: Takato Imaizumi, University of Washington, USA

Grand Ballroom FGH, 4th Floor

4-4:25 pm Abstract #32: Chromatin regulation of heat stress memory. Isabel Bäurle, University of Potsdam, Germany

4:26-4:51 pm Abstract #33: Circadian Timing Mechanisms in Seasonal Flowering, Takato Imaizumi, University of Washington, USA

4:52-5:02 pm Abstract #40: The FERONIA receptor-like kinase maintains cell integrity during salt stress through Ca2+ signaling. Jose Dinneny, Carnegie Institution for Science, Department of Plant Biology, USA

5:03-5:13 pm Abstract #42: New Insights into Crosstalk between Copper Homeostasis and Jasmonic Acid Biosynthesis and Its Role in Reproduction of A. thaliana. Jiapei Yan, Cornell University, USA

5:14-5:24 pm Abstract #60: Release of RopGEF-ROP Mediated Down-Regulation of Abscisic Acid Signal Transduction through ABA-Induced Rapid Degradation of RopGEFs. Zixing Li, University of California San Diego, USA

5:25-5:27 pm Oral Poster Abstract #51: Salt stress induces variance in the RNA structurome of Arabidopsis thaliana. David Tack, The Pennsylvania State University, USA

5:28-5:30 pm Oral Poster Abstract #44: Uncovering the cis-regulatory code of response to combined abiotic stress using machine learning. Christina Azodi, Michigan State University, USA

15

Page 18: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

THURSDAY, JUNE 22, 20175:45-6:45 pm Community-Organized Workshops

1. New and Updated Bioinformatics Datasets, Tools and Resource. Organizers: Eva Huala, TAIR and Phoenix Bioinformatics, and Chris Town, Araport and J. Craig Venter Institute.

Park View, 4th Floor

2. The ADAPTOMICS workshop on emerging Brassicaceae model species. Lead Organizer:UteKrämer(ADAPTOMICSCoordinator),RuhrUniversityBochum;andMiltos Tsiantis, Max Planck Institute for Plant Breeding Research, Cologne

Mills 3, 4th Floor

3. Overcoming the Imposter Phenomenon in Academic Science – an interactive workshop to combat imposter thoughts. Organizer: Rebecca Mosher, University of Arizona

Mills 6, 4th Floor

7-8 pm Keynote Lecture 3. Session Chair: Doris Wagner, NAASC and University of Pennsylvania Abstract #34: Breaking the silence: Making decisions in the world of uncertainty. Keiko U. Torii, Howard Hughes Medical Institute and Department of Biology, University of Washington, Seattle, USA and Institute of Transformative Biomolecules (WPI-ITbM), Nagoya University, JapanTHIS KEYNOTE LECTURE IS GENEROUSLY SPONSORED BY MONSANTO WOMEN IN SCIENCE EXCHANGE

Grand EFGH, 4th Floor

8-10:30 pm Exclusive Poster Session 2/Exhibit Hall Session 2 Grand ABCD and Foyer, 4th Floor8 - 9 pm Even # abstracts: stand by your poster to present your research

9 - 9:45 pm Even # presenters may stay at their poster or visit other posters & exhibitors

9:30 pm Posters and Exhibitors may begin dismantling

9:45-10:30 pm all posters and exhibitors must be dismantled (posters not removed by 10:30 pm may be discarded)

FRIDAY, JUNE 23, 20177 am-3 pm Luggage Hold Available

Note: Hyatt check-out time is 12 pm/noon. Please ensure you have vacated your room on time to avoid late check-out charges

Park View, 4th Floor

9-10:30 am Plenary 8: Novel ApproachesSession Chair: Roger Innes, NAASC and Indiana University

Grand EFGH, 4th Floor

9-9:30 am Abstract#35:Dynamicregulationofcellulargibberellindistributionsinfluencingplant growth patterning. Alexander M. Jones, Sainsbury Laboratory, Cambridge University, United Kingdom

9:30-10 am Abstract #36: Live-cell imaging of the intracellular dynamics during zygote polarization. Minako Ueda, Nagoya University, Japan

10-10:30 am Abstract not submitted: Editing the Arabidopsis genome. Dan Voytas, University of Minnesota, USA

10:30-11 am Coffee Break (and last chance to check out of your room by noon deadline) Grand Foyer, 4th Floor

11 am - 12 pm Keynote Lecture 4. Session Chair: Roger Innes, NAASC and Indiana UniversityAbstract #37: Toward understanding “disease-climate-microbiome” triangles in the phyllosphere. Sheng Yang He, Michigan State University, USA

12- 12:30 pm Announcement of ICAR 2018, Closing Remarks, Official Closing of ICAR 2017Michael Wrzaczek,UniversityofHelsinki;LeadorganizerofICAR2018Doris Wagner, University of Pennsylvania and Rick Vierstra, Washington University-St.Louis,USA;ICAR2017Co-chairs,MembersoftheNorthAmericanArabidopsis Steering CommitteeICAR 2017 Sponsored and Organized by The North American Arabidopsis Steering Committee

Grand EFGH, 4th Floor

16

Page 19: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

ICAR 2017 KEYNOTE LECTURES19 June 6:30 pm: Keynote Lecture 1: A day in the life of Chlamydomonas and other storiesSabeeha Merchant, UCLA, USATechnological advances in the last decade present enormous opportunities for biologists. We are no longer restricted toahandfulofreference/modelorganismsforaviewoffundamental pathways in plants, animals and microbes with molecular resolution. We can sample the diversity of extant life for a retrospective view of adaptation and evolution, giving us deeper mechanistic understanding of function, and sub-cellular structures and interactions can be visualized with atomic resolution. There is great potential for continued discovery, for expanding our knowledge base, ultimately for improving the quality of life. Three vignettes will be presented: 1) a collaboration with the Niyogi and Pellegrini groups in which we bring a previously uncharacterized organism, Chromochloris zofingiensis, to the status of a model organism with a high quality genome assembly and imaging of intracellular structures, 2) a collaboration with Ralle to visualize intracellular metal stores in Chlamydomonas with high spatial resolution, revealing highly organized structures, and 3) use of DOE user facilities for temporal resolution of macromolecular and wcentral metabolism during the Chlamydomonas cell cycle.

20 June 7:00 pm: Keynote Lecture 2: Ionome to Genome: Tales of Gene Discovery Mary Lou Guerinot, Dartmouth College, USAUnderstanding how seeds, often the edible portion of the plant, obtain and store nutrients is key to developing crops with higher agronomic and nutritional value. Most of our work has been focused on the essential micronutrients iron, manganese and zinc. Combining genetics, high throughput elemental analysis via ICP-MS and high resolution imaging via synchrotron X-ray fluorescence, we have identified and characterized a number of Arabidopsis mutants that have increased tolerance to iron deficient growth conditions and have increased iron accumulation relative to wild type plants. One of these, Ig14, has a similar metal content to wild type when grown on normal soil, but thrives on alkaline soil, accumulating significantly more iron in its shoot and seeds. A triple mutant of three closely related negative regulators of the iron deficiency response has increased tolerance to iron deficient growth conditions and increased iron accumulation without resulting toxicity. We have also uncovered unique patterns of iron and manganese localization in seeds and have now identified the genes responsible for setting up these patterns, allowing us to determine whether the patterns are biologically significant and, ultimately, whether they can be altered in support of biofortification of staple crops. We are also taking similar approaches to determine how arsenic, a non-threshold, Class 1 human carcinogen, accumulates in plants. Rice, a staple food for over half the world’s population, represents a significant dietary source of arsenic. It is imperative that strategies to reduce grain arsenic are developed, and identifying the mechanisms that enable arsenic to reach and accumulate within the rice grain is key to this endeavor.

22 June 7:00 pm: Keynote Lecture 3: Breaking the silence: Making decisions in the world of uncertaintyKeiko Torii, HHMI and University of Washington, USAIt has become evident that plants use a myriad of secreted peptides and small chemicals to coordinate their growth, development, and response to environmental insults. These signals could work for long-distance, a shoot-to-root communication for physiological adjustment, a short-distance paracrine manner, or an autocrine manner to coordinate developmental potential of plant tissue patterning. Owing to the importance of plants for our environment and sustenance, new approaches are needed to further understand and manipulate plant growth and development. To this end, we are forming a cross-disciplinary team of scientists, including synthetic organic chemists, structural chemists, and plant biologists to develop artificial ligands and receptors to probe, understand, and manipulate plant growth and development. I will describe our collaborative effort to move forward, and how our tools provides conclusive evidence for a classic, unresolved question in plant signaling.

23 June 11:00 am: Keynote Lecture 4: “Disease-climate-microbiome” triangles in the phyllosphereSheng Yang He, Michigan State University, USAOne of the most significant challenges of the 21st century is to discover innovative ways of increasing global crop production to meet the demands for food from the growing human population. A major roadblock to global food sufficiency is persistent loss of staple crops to pathogen infections. Greater efforts are needed to accelerate the buildup of a comprehensive knowledge base thatexplainshowplantdiseasesoccur;howplantsdefendagainstmicrobialpathogens;andhowdynamicclimateconditions impact plants, microbes, and their interactions. In 1960, RB Stevens (Plant Pathology, an Advanced Treatise. Vol. 3, Academic Press, New York) formulated the famous “Disease Triangle” concept, proposing that plant disease outbreaks require not only a susceptible plant and a virulent pathogen, but also conducive environmental conditions. For practical reasons, however, most contemporary investigations into plant-pathogen interactions at the molecular level devote little effort to understanding why climatic conditions, such as humidity and temperature, have a profound effect on pathogen virulence and host susceptibility. Moreover, these studies often ignore the potentially pervasive effect a plant’s endogenous microbiome may have on basic plant health and host-pathogen interactions. In this talk, I will give an example of interplays between disease, humidity and microbiota during Pseudomonas syringae infection of Arabidopsis thaliana leaves. Future studies of plant-pathogen interactions should increasingly consider the multi-dimensional nature of “disease-environment-microbiome” interactions that are more reflective of what occur in crop fields and natural ecosystems.

17

Page 20: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

OVERVIEW

MONDAY, JUNE 19: 1:30-3:00 PM

Careers Beyond the Academy. Panel Presentation and Discussion*. Lead Organizers: Joanna Friesner, and UC Davis, and Josh Gendron, Yale University. Room Location: Park View Room

TUESDAY, JUNE 20: 5:45-6:45 PM

1. Communicating your science to peers and beyond. Lead Organizer: Mary Williams, ASPB, with Ruth Bastow, Global Plant Council, and Ivan Baxter, Danforth Center. Room Location: Park View Room

2. Arabidopsis Breakthroughs with Chemistry- new techniques to think outside the box with Chemistry and Chemical Biology.LeadOrganizer/Chair:RyoungShin,withDavidGifford,Dr.MinamiMatsui,andDirectorKazuoShinozaki;RIKENCenterforSustainable Resource Science. Room Location: Mills 3

WEDNESDAY, JUNE 21: 4:15-6:30 PM

Careers in Industry. Panel Discussion and Networking Social* Note off-site location: Danforth Plant Science Center

THURSDAY, JUNE 22: 5:45-6:45 PM

1. New and Updated Bioinformatics Datasets, Tools and Resources. Organizers: Eva Huala, TAIR and Phoenix Bioinformatics, and Chris Town, Araport and J. Craig Venter Institute. Room Location: Park View Room

2. The ADAPTOMICS workshop on emerging Brassicaceae model species. Organized and funded by the German Research Priority Program Evolutionary Solutions to Ecological Challenges: Molecular Mechanisms Underlying Adaptive Traits in the Brassicaceae s.l. (DFG SPP1529). Lead Organizer: Ute Krämer (ADAPTOMICS Coordinator), Ruhr UniversityBochum;andMiltosTsiantis,MaxPlanckInstitutefor Plant Breeding Research, Cologne. Room Location: Mills 3

3. Overcoming the Imposter Phenomenon in Academic Science – an interactive workshop to combat impostor thoughts. Organized by Rebecca Mosher, University of Arizona. Room Location: Mills 6

ICAR 2017 COMMUNITY - Organized WorkshopsWORKSHOP DESCRIPTIONS AND DETAILED PROGRAMS

MONDAY, JUNE 19: 1:30-3:00 PM (1:15 pm refreshments)

Careers beyond the Academy. Panel Presentations and Discussion* Organizers: Joanna Friesner, NAASC and UC Davis, and Josh Gendron, Yale University. Room Location: Park View Room

The majority of people that earn advanced biology degrees will enternon-academiccareers;however,themajorityofbiologycurriculaandtrainingeffortscontinuetofocuson,andpreparestudents for, faculty positions in academia. The aim of this panel discussion is to engage students and postdoctoral scholars in an informative session that will provide them with:• examples of a variety of careers and jobs that could utilize the

skill set and knowledge they have obtained in graduate school or postdoctoral research

• a clear sense of the additional and unique skill set and knowledge needed to be successful in various positions (and that may not have been addressed in their graduate curriculum or postdoctoral experience)

• insights into the day-to-day life of people working in various careers that leverage advanced training in biology

• specificrecommendationsofproactivesteps,whetheritisformal or informal training, or self-assessment, or seeking mentorship, etc., that could help them identify a broader range of possible future careers, and become more competitive and attractive as candidates

• an opportunity to ask panelists questions related to working in diverse careers

PROGRAM:

1:30-1:40pm: Overview/WorkshopObjectives.JoannaFriesner, UC Davis and NAASC

1:40-2:20 pm: Panelists presentations

2:25-2:50pm:QandA/DiscussionwithAudience,Panelists

2:50-3 pm: Wrap-Up, Conclusions, Analysis, Recommendations. Josh Gendron, Yale University

PANELISTS:

1. Mary Williams, ASPB- Working in Science Communication2. Aimee Hood, Monsanto- Regulatory Communications Lead3. Ivan Baxter, Danforth Center- Working at USDA and a private

research institute4. Britney Moss, Whitman College- Working at a PUI (Primarily

Undergraduate Institution)5. José Dinneny, Carnegie Institution for Science, and ASPB

Committee on Science Policy6. Brian Keppler, Technology Specialist, McKee, Voorhees &

Sease, PLC7. Petra Tafelmeyer, Hybrigenics- Industry

*ticketed event, ticket purchased in advance at registration website

18

Page 21: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

TUESDAY, JUNE 20: 5:45-6:45 PM

Workshop 1: Communicating your science to peers and beyond.Organizers:MaryWilliams,ASPB;RuthBastow,GlobalPlant Council, and Ivan Baxter, Danforth Center. Room Location: Park View Room

Writing papers and grant proposals has always been an important part of an academic scientist’s workload, but now more than ever it is crucial for scientists to acquire additional communication skills in order to disseminate the results of their work more broadly. We’ll hear from scientists at various stages of their careers and on various career paths about their approaches to science communication, whether about their own or the work of others. We’ll discuss WHY communication skills are important, how to develop them, how to make the most of social media, as well as the importance of infographics in science communication and tools to help you to create them. We’ll also hear from experts about the strengths and weaknesses of various approaches and platforms (from blogs to YouTube), how organizations and platforms such as GARNet, Global Plant Council, ASPB, and Plantae.orgcansupportyoursciencecommunicationefforts,and how the new journal Plant Direct will promote an open science ethos.5:45 – 5:55 pm: Communication: Is this thing on? Bethany Huot (FounderandDirectorofTheCOM/ThePubClub,MichiganStateUniversity)5:55 – 6:05 pm: Bringing exciting Science to Scientists. Geraint Parry (GARNet Coordinator)6:05 – 6:15 Conveying information in a Twitter-world: utilizing infographics to expand the reach of your research. Erin Sparks (Assistant Professor, University of Delaware)6:15 – 6:25 pm: Using preprints to accelerate your career. Ivan Baxter(PrincipleInvestigator,USDA-ARS/DonaldDanforthPlantScience Center and Editor-in-Chief, Plant Direct)6:25 – 6:35 pm:How professional societies, journals, and Plantae.org can help you get your message out. Ruth Bastow (Executive Director, Global Plant Council) and Mary Williams (Features Editor, The Plant Cell, American Society of Plant Biologists)

6:35 – 6:45 pm: Wrap up and discussion

Workshop 2: Arabidopsis Breakthroughs with Chemistry- new techniques to think outside the box with Chemistry and Chemical Biology. Organizers:RyoungShin,withDavidGifford,Dr.MinamiMatsui,andDirectorKazuoShinozaki;RIKENCenterfor Sustainable Resource Science. Room Location: Mills 3

This workshop will present and discuss the ways chemical and otherpracticalapproacheshelpfindanswerswhichhavenotbeen found for a long time with conventional approaches. RIKEN Center for Sustainable Resource Science (CSRS), workshop organizer, aims to achieve a resource and energy sustainable societybycombininguniqueinterdisciplinaryfieldsofplantscience, chemistry and chemical biology. In the last a few years, RIKEN CSRS has presented successful research outcomes via this interdisciplinary approach. We would like to share our knowhow and that of others using these techniques with the Arabidopsis community on how to make a breakthrough using chemical approaches.Thisworkshopwillconsistof4talksondifferenttopics using Arabidopsis and various chemical approaches.5:45- 6:00 pm. A novel role for methyl cysteinate and cysteine in cesium accumulation and response in Arabidopsis. Ryoung Shin (RIKEN CSRS, Japan)

6:00-6:15 pm. Redox Chemistry and Metabolic Regulation: An Example from Sulfur Metabolism. Joe Jez (Washington University in St. Louis, USA) 6:15-6:30 pm. Using chemical genetics to discover components contributing to plant immunity. Xin Li (Univ. of British Columbia, Canada) 6:30-6:45pm.Decipheringtheendomembranetraffickingnetwork with small molecules. Glenn Hicks (UC Riverside, USA)

THURSDAY, JUNE 22: 5:45-6:45 PM

Workshop 1: New and Updated Bioinformatics Datasets, Tools and Resource. Organizers: Eva Huala, TAIR and Phoenix Bioinformatics, and Chris Town, Araport and J. Craig Venter Institute. Room Location: Park View Room

This workshop includes a series of short talks from several major Arabidopsis data and stock resources, aimed at providing a quick overview of what’s new at each one. Designed for both experienced researchers needing a reminder on what is available and those new to Arabidopsis research, we will aim to bring researchers up to speed on the latest developments, to ensure that everyone is aware of what is available and can take full advantage of the latest tools, data and resources in their work.

5:45 - 5:54 pm: Araport. Chris Town, Vivek Krishnakumar (J. Craig Venter Institute). We will demonstrate how to search, analyze, and download a wide array of data (including the Araport11 annotation integrated with RNA-seq expression, coexpression, physical and genetic interactions, pathways, seed stocks, publications, and more) through the core components ThaleMine and JBrowse. ThaleMine also provides a user-friendly interface for running gene list enrichment analysis, building data queries, exportingdatatables,andsaving/sharingwork.Tofurtherenhance data sharing, discovery and re-use by the community, we are developing simple mechanisms for users to automatically integrate their data sets with Araport simply by providing the appropriateGFForBAMfileandassociatedmetadata.

5:54 - 6:02 pm: New data and features at TAIR. Eva Huala, Shabari Subramaniam (Phoenix Bioinformatics). With direct funding from the research community, TAIR (www.arabidopsis.org) continues to add new experimental gene function data from research literature. We will present a quick overview of new data and features at TAIR, including our new Gene Family band enabling researcherstomoreeasilyfindorthologsinotherplantsandview them in a phylogenetic tree. We will also demonstrate how to submit your new gene function experimental results to TAIR, where they will have increased impact and visibility to the plant research community.

6:02 - 6:11 pm: The Bio-Analytic Resource for Plant Biology. Nicholas Provart (University of Toronto). We present Genome Canada-funded apps for Araport and others. ePlant, a zoomable user interface for exploring Arabidopsis data across 12 orders of magnitude, from the kilometre scale down to the nanometre scale,encompasses20differentkindsofgenome-widedatacovering gene expression, subcellular localization, 3D molecular structure, chromatin states, and many others. We have created linkages between levels to enable posing questions that are biologicallyrelevant.Wealsopresentthefinalappofthisgrant, the eFP-Seq Browser, for easily exploring RNA-seq data (published or researcher-supplied) both as reads mapped to gene models and as pictographs of summarized expression values.

19

Page 22: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

6:11 - 6:20 pm: 1001 Genomes. Arthur Korte (University of Würzburg). The 1001 Genomes Project was launched 2008 to discover detailed whole-genome sequence variation in differentArabidopsisaccessions.Seedsfromtheseaccessionsare available from the stock centre.As unlimited numbers of plants with identical genotype can be grown and phenotyped, the sequence information can be used directly in association studies. Recently we published the detailed analysis of 1135 genomes, which enables the construction of a comprehensive “genotype-to-phenotypes” map and allows meta-analyses of pleiotropy. We developed various databases and tools ranging from web-applications for GWAS, a phenotype database and tools to identify A. thaliana strains.

6:20 - 6:29 pm: New tools and resources for the Arabidopsis community from the ABRC. R. Keith Slotkin, ABRC team (Ohio State University). Located at The Ohio State University, the Arabidopsis Biological Resource Center (ABRC) serves the plant biology community by distributing Arabidopsis seeds, DNA clones from Arabidopsis and other plant species, as well as teaching and outreach resources. Recent improvements to the ABRC that will be discussed include new seed and DNA clone stocks, new quality control technologies and pipelines, and new teaching and outreach kits. In addition, the ABRC will be providing an update on the development of a new public database platform for all stocks hosted at the ABRC.

6:29-6:37pm:TheNottinghamArabidopsisStockCentre(http://www.arabidopsis.info) - An update. Marcos Castellanos-Uribe, Sean May (University of Nottingham). NASC received 6,875 new stocks in 2016 including 4,452 GABI-Kats, 1,302 SALKs, 236 ecotypes and 885 small donations. Most notable additions to our catalogue include the new Koornneef ecotype lines, CAB and CCA mutants from Prof. Andrew Millar and several SALKSeq stocks from Joe Ecker. Based on customer feedback, we now offertheoptiontoaddphytosanitaryrequeststoanyorderandtodeliverseedstocksbyexpress/courierdeliveryforastandardfee. Search functionality has also been optimised by broadening its scope and publication links have been added to access publication data directly from the stock info page.

6:37 - 6:45 pm: RIKEN BRC. Satoshi Iuchi (RIKEN). RIKEN BioResource Center (BRC) distributes research materials such as seed lines, cDNA clones and cultured cell lines to the internationalscientificcommunity.Wehavestarteddevelopinga systematic web-database that allows user scientists to obtain entire information of materials in RIKEN BRC. In order to make the database useful enough for the scientists, we encourage attendees to provide us any suggestions and comments.

Workshop 2: The ADAPTOMICS workshop on emerging Brassicaceae model species (DFG SPP1529). Lead Organizer: UteKrämer(ADAPTOMICSCoordinator),RuhrUniversityBochum;and Miltos Tsiantis, Max Planck Institute for Plant Breeding Research, Cologne. Room Location: Mills 3

Arabidopsis thaliana is the most developed plant model, whichcontinuestoallowgreatscientificprogressintheplantsciences. The very biology that facilitated the success of Arabidopsis as a model organism, however, implies that highly important research questions cannot be addressed in this species. The German DFG-funded Research Priority Programme 1529 ADAPTOMICS (“Evolutionary Solutions to Ecological

Challenges: Molecular mechanisms underlying adaptive traits intheBrassicaceaes.l.”;www.adaptomics-dfg.de)hasbeenworkingtowardsfillingthisgapoverthepastsixyears.Thegoalofthisresearchprogramistoemploythebenefitsaffordedbygenomics and high-throughput sequencing technologies in ordertoaddresstraitsandscientificquestionsthatcannotbestudied in Arabidopsis alone, while taking maximal advantage of knowledge, tools and resources available for this closely related species. This workshop will showcase the successful development of novel Brassicaceae model species and genome-enabled approaches towards understanding the molecular mechanistic basis, ecological roles and evolutionary history of important phenotypic traits that are not found in A. thaliana. There will be one established speaker from within the ADAPTOMICS consortium (I) and two selected speakers from outside the consortium who are young PIs (II, III).

5:45-6:09 pm: Exploiting Cardamine hirsuta to understand the genetic basis for evolution of plant form. Prof. Dr. Miltos Tsiantis, Director, Max Planck Institute for Plant Breeding Research, Cologne, Germany.

6:09-6:27 pm: The Genomic Basis of Extreme Edaphic Adaptations in Schrenkiella parvula. Dr. Maheshi Dassanayake, Assistant Professor, Louisiana State University, Baton Rouge, LA, USA.

6:27-6:45 pm: Insights from Population Genomics in Natural Populations of Arabidopsis arenosa. Dr. Levi Yant, Project Leader, John Innes Center, Norwich, UK.

Workshop 3: Overcoming the Imposter Phenomenon in Academic Science – an interactive workshop to combat imposter thoughts. Organizer: Rebecca Mosher, University of Arizona. Room Location: Mills 6

Imposter Phenomenon (IP, or Impostor Syndrome) is the persistent feeling that you aren’t as smart as your colleagues, that your success is due to luck rather than your abilities, and that you are an ‘imposter’ who will one day be discovered. IP wasfirstdescribedforhighachievingwomen,butitiscommonamong other underrepresented groups as well as the population as a whole. IP is particularly prevalent among high achievers and inacademicrealms.ThereareanumberofnegativeeffectsofIP,including anxiety, overwork, and avoiding interaction.

One of the most powerful ways to combat IP is to acknowledge it and understand that many people feel this way. This workshop willdescribeIPandthemanywaysitcanmanifest;discusstheimpactsofIPonscientificcareers,andacademicscienceinparticular;andprovidespecificstrategiestorecognizeandcombat imposter thoughts. The workshop is interactive and participants are encouraged to discuss their experiences in small groups or anonymously. Although primarily aimed at those who have experienced imposter thoughts, the workshop will also educate supervisors so that they can be better mentors. Attendees will leave with a clear understanding of Imposter Syndrome, the ability to recognize imposter thoughts in themselvesandothers,andspecificactionstotaketo combat Imposter Syndrome.

20

Page 23: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Posters can be set up starting Monday 12:00 pm/1200 hours;all posters will remain up through Thursday, 10 pm/2200 hours. TheycanalsobepostedTuesdayat8am/0800,andmustbeinplacebyTuesdayat12pm/1200hours(Location:GrandBallroomABCD)

There will be two formal poster sessions: Tuesday and Thursday evenings. At each, half the posters will be presented for the first hour with poster presenters standing next to their poster to talk with attendees. The second hour of the poster sessions is open time for all attendees to browse posters and talk to exhibitors. There are also informal poster and exhibitor sessionsduringlunchonTuesdayandThursday;presentersarenot required to stand by posters at lunchtimes.

To determine when you should stand next to your poster, find your abstract in this book and note the new abstract number. Abstracts are grouped by topic. Scan this abstract list to find your Session and new number. The new number is your poster number (if you are presenting a poster) and is also your oral presentation number (if applicable.)

All posters with ODD numbers will be presented on Tuesday eveningfrom8:00pm/2000-9:00pm/2100

All posters with EVEN numbers will be presented on Thursday eveningfrom8:00pm/2000-9:00pm/2100

The remaining session time can be used to present your poster longer or you may go browse other posters and visit exhibit booths. ALL POSTERS MUST BE TAKEN DOWN THURSDAY JUNE 22, NOLATERTHAN10:30PM/2230HOURS.

If not removed by 10:30 pm they will be discarded by hotel staff. Notes: The poster and exhibit room opens Tuesday, Wednesday andThursday;at8am/0800andclosesatvarioustimes(consultprogram). Open browsing of all posters is encouraged before and after the presentation times, including during lunch on Tuesday and Thursday. Some speakers selected from abstracts chose nottobringaposter;thisisnotedby(No poster) next to their abstract in the list below.Invited Speakers: Abstracts 1 - 37Abiotic Interactions: Abstracts 38 - 70Applied: Biotechnology, Molecular Breeding, Human/Societal Health: Abstracts 71 - 74Cell and Developmental Biology: Abstracts 75 - 133Education and Outreach: Abstract 134Epigenetics and Chromatin: Abstracts 135 - 153Gene Regulation: Abstracts 154 - 174Hormone Signaling: Abstracts 175 - 208Metabolism and Biochemistry: Abstracts 209 - 218Natural Variation, Evolution, Ecology: Abstracts 219 - 227Novel Tools, Techniques and Resources: Abstracts 228 - 233Plant Defense and Biotic interactions: Abstracts 234 - 282

Post-Translational Regulation: Abstracts 283 - 301Structural Biology: Abstract 302 - 306Systems or Synthetic Biology, Bioinformatics, Modeling: Abstracts 307 - 311Translational Biology: Abstracts 312 - 321Late Abstracts: Abstracts 322 - 323

INVITED SPEAKERS: Abstract #1. Translation regulation of plant hormone responses. (Submission 257) Jose Alonso, NCSU, USA Abstract #2. Regulation of Auxin Response Factors (Submission 307) Lucia Strader, Washington University in St. Louis, USAAbstract #3. Structures and processes impacting on the microbial colonisation of plants (Submission 269) Sebastian Schornack, University of Cambridge, Sainsbury Laboratory (SLCU), United KingdomAbstract #4. A day in the life of Chlamydomonas and other stories (Submission 298) Sabeeha Merchant, UCLA, USA Abstract #5. Tending the Microtubule Garden: Pruners, Protectors and Growers (Submission 295) Ram Dixit, Washington University in Saint Louis, USA Abstract #6. Endodermal differentiation - walking the thin line between protection and exchange (Submission 284) Niko Geldner, University of Lausanne, Switzerland Abstract #7. Arabidopsis halleri – a model species to study local adaptation (Submission 293) Ute Krämer, Ruhr University Bochum, Germany Abstract #8. Fire, phosphate, friends, and foes: the evolution of karrikin and strigolactone signaling (Submission 300) David Nelson, University of California, Riverside, USA Abstract #9. Defining the transcriptional regulatory structure of plant genomes (Submission 258) Roger Deal, Emory University, USAAbstract #10. The multiple facets of Polycomb Repressive Complexe 2 (Submission 314) Francois Roudier, FranceAbstract #11. How membrane trafficking regulates immunity (Submission 146) Silke Robatzek, The Sainsbury Laboratory, United KingdomAbstract #12. Closing the deal: Arabidopsis LORELEI is required for pollen tube reception by the female gametophyte (Submission 387) Ravi Panivelu, University of Arizona, USAAbstract #13. Symplastic signaling during root development (Submission 249) Kimberley Gallagher, USAAbstract #14. Interplay between phosphorylation and ubiquitination in plant immune signaling (Submission 299) Jacqueline Monaghan, Queen’s University, CanadaAbstract #15. Post-translational mechanisms of brassinosteroid and sugar responses (Submission 391) Zhiyong Wang, USA

LIST OF ABSTRACTS AND PRESENTERS AND POSTER PRESENTATION SCHEDULE

21

Page 24: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Abstract #16. Ionome to Genome: Tales of Gene Discovery (Submission 390) Mary Lou Guerinot, Dartmouth College, USA Abstract #17. Towards a quantitative understanding of how signals drive cell fate decision-making at the shoot apical meristem (Submission 294) Teva Vernoux, ENS de Lyon, FranceAbstract #18. Hopeful monsters and plant synthetic biology (Submission 274) Jennifer Nemhauser, U Washington, USA Abstract #19. Topological features of a gene co-expression network predict patterns of natural diversity in environmental response (Submission 360) David DesMarais, Harvard University, USA Abstract #20. Natural Variation Within And Among Species: Integrating Population Genomics and Comparative Genomics of Brassica and Relatives (Submission 75) J. Chris Pires, University of Missouri, USA Abstract #21. Using Natural Variation to Uncover the Genetic Basis of Root Traits in Arabidopsis (Submission 289) Wolfgang Busch, Salk Institute, USA Abstract #22. Epigenetic regulation of genome expression, environmental and developmental interaction (Submission 261) Xuehua Zhong, University of Wisconsin-Madison, USAAbstract #23. Epigenetic inheritance of DNA methylation patterns (Submission 354) Daniel Zilberman, UC Berkeley, United KingdomAbstract #24. Insight of histone demethylases targeting in Arabidopsis (Submission 254) Xiaofeng Cao, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, China Abstract #25. Spatiotemporal averaging of variable cell growth produces regular Arabidopsis sepals (Submission 129) Adrienne Roeder, Cornell University, USAAbstract #26. Manipulating heterotrimeric G-protein signaling to improve plant yield and stress tolerance (Submission 287) Sona Pandey, Donald Danforth Plant Science Center, USA Abstract #27. Low oxygen and energy: Multi-scale gene regulatory responses in Arabidopsis and rice (Submission 278) Julia Bailey-Serres, UC Riverside, USAAbstract #28. Mechanisms and evolution of imprinting in plants (Submission 273) Mary Gehring, Whitehead Institute, USA Abstract #29. Hormone metabolism and biased ligand signaling in plants (Submission 313) Jing-Ke Weng, Whitehead Institute and MIT, USA Abstract #30. Molecular Controls in Plant Hormone Signaling (Submission 256) Joe Jez, Washington University in St. Louis, USA Abstract #31. Inositol pyrophosphate signaling molecules control plant phosphate homeostasis by binding to SPX sensor domains (Submission 255) Michael Hothorn, SwitzerlandAbstract #32. Chromatin regulation of heat stress memory (Submission 283) Isabel Bäurle, Universität Potsdam, Germany Abstract #33. Circadian Timing Mechanisms in Seasonal Flowering (Submission 302) Takato Imaizumi, USA

Abstract #34. Breaking the silence: Making decisions in the world of uncertainty (Submission 268) Keiko Torii, HHMI and University of Washington, USAAbstract #35. Dynamic regulation of cellular gibberellin distributions influencing plant growth patterning (Submission 270) Alexander Jones, Sainsbury Laboratory Cambridge University, United KingdomAbstract #36. Live-cell imaging of the intracellular dynamics during zygote polarization (Submission 98) Minako Ueda, Nagoya University, JapanAbstract #37. “Disease-climate-microbiome” triangles in the phyllosphere (Submission 263) Sheng Yang He, Michigan State University, USA

ABIOTIC INTERACTIONS:Abstract #38. Two redox-sensitive bZIP transcription factors modulate the balance between stress tolerance and growth (Submission 46) Yiji Xia, Hong Kong Baptist University, Hong KongAbstract #39. Isolation of Arabidopsis mutants with abnormalities in stomatal response to humidity, light, or CO2 (Submission 52) Keina Monda, Kyushu University, JapanAbstract #40. The FERONIA receptor-like kinase maintains cell integrity during salt stress through Ca2+ signaling (Submission 55) Jose Dinneny, Carnegie Institution for Science, Department of Plant Biology, USAAbstract #41. Mechanism of early light signaling by the carboxy-terminal output module of Arabidopsis phytochrome B (Submission 73) YONGJIAN QIU, University of California, Riverside, USAAbstract #42. New Insights into Crosstalk between Copper Homeostasis and Jasmonic Acid Biosynthesis and Its Role in Reproduction of A. thaliana (Submission 83) Jiapei Yan, Cornell University, USAAbstract #43. Mutational Analysis of Arabidopsis CAMTA3 Activity in response to Low Temperature and Pathogen Infection (Submission 102) Yong Sig Kim, Texas Tech University, USAAbstract #44. Uncovering the cis-regulatory code of plant response to combined abiotic stress using multi-dimensional data integration and machine learning (Submission 108) Christina Azodi, Michigan State University, USAAbstract #45. Novel Epigenetic and Antisense RNA Regulation in Plant Abiotic Stress Adaptation (Submission 127) Motoaki Seki, RIKEN CSRS, JapanAbstract #46. Oligopeptide transporter 3, OPT3, is required for copper homeostasis in Arabidopsis thaliana (Submission 128) Ju-Chen Chia, Cornell University, USAAbstract #47. Trehalose-6-phosphate phosphatase I harbors a novel peroxisomal signal and is implicated in abiotic stress and development (Submission 133) Amr R.A. kataya, University of Stavanger, NorwayAbstract #48. GIGANTEA and ZEITLUPE interactions underlie a molecular basis for temperature compensation in the circadian clock (Submission 137) David Somers, Ohio State University, USA

22

Page 25: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Abstract #49. Transcriptional regulation of nitrogen metabolism (Submission 140) Siobhan Brady, UC Davis, USAAbstract #50. Roles of the NUCLEAR FACTOR Y (NF-Y) as positive regulators of light-mediated development (Submission 148) Zachary Myers, University of Oklahoma, USAAbstract #51. Salt stress induces variance in the RNA structurome of Arabidopsis thaliana. (Submission 150) David Tack, The Pennsylvania State University, USAAbstract #52. CRF2 modulates cytokinin levels in response to salt stress (Submission 163) Erika Keshishian, Auburn University, USAAbstract #53. Transcriptome-metabolome co-analysis reveals temperature- and air humidity-related heat components and novel networks in drought-heat scenarios (Submission 167) Anton R. Schaeffner, Helmholtz Zentrum Muenchen, GermanyAbstract #54. Ectopic expression of psNTP9, an apyrase gene from Pisum sativum improves root system architecture and imparts drought tolerance in transgenic Arabidopsis (Submission 168) Roopadarshini Veerappa, University of Texas at Austin, USAAbstract #55. The reds and the blues of the shade avoidance response (Submission 171) Ullas Pedmale, Cold Spring Harbor Laboratory, USAAbstract #56. Molecular mechanism of thermotolerance caused by a mutation in an mTERF (mitochondrial Transcription tERmination Factor) protein (Submission 176) Minsoo Kim, UMass Amherst, USAAbstract #57. Global gene expression analysis using RNA-seq uncovered a new role for SR1/CAMTA3 transcription factor in salt stress (Submission 182) Amira Abdel-Hameed, Colorado State University, USAAbstract #58. Identification and characterization of water sensing mechanisms in plants (Submission 184) Tamara Vellosillo, Carnegie Institution for Science, USAAbstract #59. Walking the dog(ma) in low oxygen: From DNA to RNA to protein synthesis in response to and recovery from hypoxia (Submission 191) Travis Lee, University of California, Riverside, USAAbstract #60. Release of RopGEF-ROP Mediated Down-Regulation of Abscisic Acid Signal Transduction through ABA-Induced Rapid Degradation of RopGEFs (Submission 217) Zixing Li, University of California San Diego, USAAbstract #61. Plasma Membrane Proteomic analysis reveals the role of Arabidopsis DRP1E During Cold Acclimation in Association with Freezing Tolerance Development (Submission 219) Etsuko Watanabe, Iwate University, JapanAbstract #62. Exploring the role of Mediator subunits in Arabidopsis responses to abiotic stresses (Submission 228) Fazeelat Karamat, Umeå University, SwedenAbstract #63. HSP90 and SGT1 regulate temperature-dependent plant growth in Arabidopsis (Submission 251) Renhou Wang, University of California San Diego, USAAbstract #64. Signaling circuitry for ER stress resolution in plants (Submission 267) Cristina Ruberti, MSU, USA

Abstract #65. Pirin1 controls blue light-induced transcription of several genes in early development (Submission 336) Yang Chen, University of Illinois at Chicago, USAAbstract #66. IRE1b links ER stress to autophagy in Arabidopsis by degrading RNAs encoding proteins that negatively regulate autophagy (Submission 340) Steve Howell, Iowa State University, USAAbstract #67. Identification of upstream kinases of VCS under osmotic stress conditions in Arabidopsis (Submission 349) Fumiyuki Soma, The University of Tokyo, JapanAbstract #68. Modulation of Autophagy Impacts Nanoharvesting Yield in A. Thaliana (Submission 356) Timothy Shull, University of Kentucky, USAAbstract #69. Modulation of the Phosphate-Deficient Responses by MicroRNA156 and its Targeted SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3 in Arabidopsis (Submission 357) Chun-Peng Song, Henan University, ChinaAbstract #70. Role of Arabidopsis ABF genes during det1 germination in salt and osmotic stress conditions (Submission 366) Dana Schroeder, University of Manitoba, Canada

APPLIED: BIOTECHNOLOGY, MOLECULAR BREEDING, HUMAN/SOCIETAL HEALTH:Abstract #71. (No poster) A novel role for methyl cysteinate and cysteine in cesium accumulation and response in Arabidopsis (Submission 220) Ryoung Shin, RIKEN Center for Sustainable Resource Science, JapanAbstract #72. Genome-wide identification and expression analysis of CCCH zinc finger family in cotton (Submission 262) Baoshuan Shang, Henan University, ChinaAbstract #73. Effect of parental age on meiotic recombination rates in Arabidopsis (Submission 312) Ramswaroop Saini, Indian Institute of technology Madras, IndiaAbstract #74. The Regulation of GAs Biosynthesis During the Photoperiodic Response in Aspen. (Submission 333) Jose Alfredo Zambrano, Swedish University of Agricultural Sciences, Sweden

CELL AND DEVELOPMENTAL BIOLOGY:Abstract #75. CLAVATA1 controls distinct signaling outputs that buffer shoot stem cell proliferation through a two-step transcriptional compensation loop. (Submission 17) Zachary Nimchuk, University of North Carolina at Chapel Hill, USAAbstract #76. RCBL: a novel phytochrome signaling component initiates chloroplast biogenesis (Submission 28) Emily Jie-Ning Yang, Duke University, USAAbstract #77. (No poster) Direct metal sensing by the IRT1 transporter/receptor orchestrates its degradation by endocytosis and plant metal nutrition (Submission 35) Greg Vert, I2BC, Gif-sur-Yvette, FranceAbstract #78. Rhamnose-containing cell wall polymers suppress helical plant growth independently of microtubule orientation (Submission 40) Adam Saffer, Yale University, USAAbstract #79. Novel Small Peptides in Arabidopsis Root Development Revealed by Super-Resolution Ribosome Profiling (Submission 41) Polly Hsu, Duke University, USA

23

Page 26: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Abstract #80. Genetic Architecture and Molecular Networks of Leaf Thickness in Desert-Adapted Tomato (Solanum pennellii) (Submission 44) Viktoriya Coneva, Donald Danforth Plant Science Center, USAAbstract #81. Identification of novel proteins involved in cytoskeleton-endomembrane crosstalk through forward genetic screens on actin disrupting compounds (Submission 50) Elison Blancaflor, The Samuel Roberts Noble Foundation, USAAbstract #82. Autocrine regulation of stomatal differentiation potential by EPF1 and ERECTA-LIKE1 ligand-receptor signaling (Submission 58) Xingyun Qi, University of Washington, USAAbstract #83. Sucrose is transported from leaves to seeds by SWEETs (Submission 61) Li-Qing Chen, University of Illinois at Urbana-Champaign, USAAbstract #84. Remodeling of the FtsZ Ring during Chloroplast Division in Arabidopsis Requires Activation of ARC3 by PARC6 at the Division Site (Submission 63) Cheng Chen, Department of Plant Biology, Michigan State University, USAAbstract #85. CELLULASE 6 and MANNANASE 7 affect cell differentiation and silique dehiscence in Arabidopsis (Submission 64) Ming Yang, Oklahoma State University, USAAbstract #86. Mechanisms of ribosomal RNA turnover and their role in cellular homeostasis in Arabidopsis (Submission 67) Gustavo MacIntosh, Iowa State University, USAAbstract #87. Identifying regulators of asymmetric protein localization in the stomatal lineage (Submission 72) Yan Gong, Stanford University, USAAbstract #88. Efficient Plastid Transformation in ACC2-Defective Arabidopsis (Submission 74) Pal Maliga, Rutrgers, The State University of New Jersey, USAAbstract #89. PCH1 is essential for phyB nuclear-microdomain formation to regulate photomorphogenesis and light input into the circadian clock (Submission 88) He Huang, Donald Danforth Plant Science Center, USAAbstract #90. The elaborate delivery of UDP-arabinose into the Golgi of plants (Submission 96) Joshua Heazlewood, The University of Melbourne, AustraliaAbstract #91. Regulation of root cell elongation by a transcription factor, which acts under signal of the ROS. (Submission 97) Hironaka Tsukagoshi, Meijo University, JapanAbstract #92. Elucidation of the TOR (target of rapamycin) network by new TOR kinase alleles (Submission 100) Myriam Schaufelberger, University of Zurich, SwitzerlandAbstract #93. LRX1: An extracellular chimeric protein important for cell wall development in Arabidopsis thaliana (Submission 101) Shibu Gupta, University of Zurich, SwitzerlandAbstract #94. AMP1 controls SAM integrity by limiting HD-ZIPIII transcription factor activity (Submission 110) Saiqi Yang, Plant Growth Regulation, Technical University of Munich, Freising, Germany

Abstract #95. IOJAP is Necessary for Plant Development at Low Temperature by Mediating Chloroplast Development in Arabidopsis thaliana. (Submission 111) Thomas Payne, University of Tennessee, USAAbstract #96. Cross-species functional diversity within the PIN auxin efflux protein family (Submission 113) Devin O’Connor, Sainsbury Laboratory Cambridge University, United KingdomAbstract #97. Gene regulatory networks controlling stem cell regulation in the Arabidopsis thaliana root (Submission 114) Natalie Clark, North Carolina State University, USAAbstract #98. Role of Carbonic Anhydrases in Anther Cell Differentiation as Downstream Players of the EMS1 Receptor Kinase (Submission 115) Jian Huang, University of Wisconsin-Milwaukee, USAAbstract #99. The role of receptor kinase ERECTA in Shoot Apical Meristem development (Submission 118) Pawel Kosentka, University of Tennessee-Knoxville, USAAbstract #100. Protein destinations in Arabidopsis, within and between organelles (Submission 136) Harriet Parsons, University of Cambridge, United KingdomAbstract #101. Cis- and trans-factors involved in the targeting of Korrigan 1 (KOR1) to multiple organelles in Arabidopsis (Submission 139) Yukihiro Nagashima, Texas A&M University, USAAbstract #102. The genetical origins of the fractal morphologies in cauliflower curds (Submission 141) Eugenio Azpeitia, INRIA, FranceAbstract #103. Regulation of Arabidopsis flower development by the transcription factor AINTEGUMENTA (Submission 147) Beth Krizek, Univ. of South Carolina, USAAbstract #104. ATG14 guides PI3K complex I to regulate early autophagic events in Arabidopsis (Submission 149) Fen Liu, Washington University in St. Louis, USAAbstract #105. Efficient selection of antibody fragments using phage display and exhaustive yeast two-hybrid screening (Submission 153) Petra Tafelmeyer, Hybrigenics Corp., USAAbstract #106. The Arabidopsis flowering regulator CONSTANS binds DNA in a heterotrimeric complex that is analogous to NF-Y complexes (Submission 158) Ben Holt, University of Oklahoma, USAAbstract #107. Compartmentation of Putrescine biosynthesis in plants (Submission 161) Menaka Ariyaratne, Bowling Green State University, USAAbstract #108. Molecular Requirements for MLO-Mediated Communication During Pollen Tube Reception (Submission 162) Daniel Jones, University of Oklahoma, USAAbstract #109. The role of the shoot apical meristem in vegetative phase change (Submission 164) Jim Fouracre, University of Pennsylvania, USAAbstract #110. Characterizing new Arabidopsis microtubule plus-end tracking proteins (Submission 166) Rachappa Balkunde, Washington University in St. Louis, USA

24

Page 27: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Abstract #111. Branching of the root system is promoted by photosynthesis (Submission 178) Lina Duan, Carnegie Institution for Science, USAAbstract #112. Chloroplast proteolysis in Arabidopsis; functional contributions of ClpP5 and ClpP3 in Clp protease activity (Submission 179) Jui-Yun Liao, Cornell University, USAAbstract #113. SnRK1 phosphorylation of FUSCA3 regulates embryo growth rate, seed yield and plant growth at high temperature in Arabidopsis (Submission 181) Sonia Gazzarrini, University of Toronto, CanadaAbstract #114. An inference approach combines spatial and temporal gene expression data to predict gene regulatory networks in Arabidopsis stem cells (Submission 192) Ross Sozzani, NCSU, USAAbstract #115. Characterization of the hypergravitropic Arabidopsis mutant gravity persistent signal 5 (gps5) (Submission 227) Darron Luesse, Southern Illinois University Edwardsville, USAAbstract #116. Chemical and physical signals in the control of early photomorphogenesis in Arabidopsis (Submission 229) Ankit Walia, The Sainsbury Laboratory, University of Cambridge, United KingdomAbstract #117. PLK1, a receptor-like kinase, is required for root patterning and, in different cell types, localizes to distinct plasma membrane domains (Submission 238) Jaimie Van Norman, University of California, Riverside, USAAbstract #118. Sorting of tail-anchored proteins to different membranes in chloroplasts (Submission 292) Donna Fernandez, University of Wisconsin-Madison, USAAbstract #119. Synergistic regulation of shoot apical meristem by ERf and CLAVATA signaling pathways (Submission 309) Liang Zhang, University of Tennessee, USAAbstract #120. Evidence of a SERK1-SOBIR1 mediated signaling pathway regulating floral abscission in Arabidopsis (Submission 310) Isaiah Taylor, University of Missouri, USAAbstract #121. Identification of Auxin Co-Receptors that Regulate Transverse Microtubule Patterning in Epidermal Hypocotyl Cells (Submission 319) Jillian True, Indiana University, USAAbstract #122. The Discrete Reproductive Expression Domains of the Arabidopsis MLO Family (Submission 325) Thomas Davis, Purdue University, USAAbstract #123. Investigating the mechanistic role of THRUMIN1 in blue light-induced chloroplast movement (Submission 327) Matthew Dwyer, Indiana University, Bloomington, USAAbstract #124. The Roles of NF-Y and bZip Transcription Factors in Floral Development (Submission 329) Andrew Willoughby, University of Oklahoma, USAAbstract #125. ANTI-SILENCING FUNCTION1 Proteins are required for mitosis in gametogenesis in Arabidopsis. (Submission 332) Yunsook Min, Seoul National university, Korea, Republic of

Abstract #126. Molecular regulation of the cambium: from Arabidopsis research to tree research (Submission 334) Melis Kucukoglu, University of Helsinki, FinlandAbstract #127. In vivo analysis of the receptor kinase ERECTA reveals a specific role for its domain (Submission 346) Michal Maes, Departement of Biology, USAAbstract #128. Role of the SCRM C-Terminal Domain in the Stomata Differentiation Pathway (Submission 347) AARTHI PUTARJUNAN, UNIVERSITY OF WASHINGTON, USAAbstract #129. Phloem sieve element regulates periclinal cell divisions in Arabidopsis root vasculature via mobile transcription factors (Submission 355) Iris Sevilem, University of Helsinki, FinlandAbstract #130. Auxin response factors regulate flower primordia initiation by repressing the pluripotency program (Submission 359) Yuhee Chung, University of Pennsylvania, USAAbstract #131. Understanding the Function of MSL7 and MSL8, Two Mechanosensitive Ion Channels Expressed in the Arabidopsis thaliana Pollen Tube (Submission 370) Yanbing Wang, Washington University in St. Louis, USAAbstract #132. Identification of chloroplast interaction partners of Matrix Attachment Region Binding Protein1 (MFP1) in Arabidopsis thaliana (Submission 375) Sandipty Kayastha, Appalachian State University, USAAbstract #133. Telomerase and Cajal body RNP assembly in Arabidopsis (Submission 389) Mario Izaguirre Sierra, Northern New Mexico College, USA

EDUCATION AND OUTREACH:Abstract #134. Promotion of Urban and Suburban Agriculture Through Basic Research, Education, and Community Outreach Programs (Submission 342) Michael Schläppi, Marquette University, USA

EPIGENETICS AND CHROMATIN:Abstract #135. POWERDRESS interacts with HISTONE DEACETYLASE 9 to promote aging in Arabidopsis (Submission 12) Xiangsong Chen, University of Wisconsin-Madison, USAAbstract #136. The plant-specific histone residue Phe41 is important for genome-wide H3.1 distribution (Submission 24) Li Lu, University of Wisconsin, USAAbstract #137. Cis- and trans-determinants of epigenetic silencing by Polycomb Repressive Complex 2 in Arabidopsis (Submission 30) Jun Xiao, University of Pennsylvania, USAAbstract #138. Genome Elimination in Arabidopsis (Submission 80) Ek Han Tan, University of Maine, USAAbstract #139. Pol IV-dependent siRNAs from maternal somatic tissue are required for seed development (Submission 81) Rebecca Mosher, The University of Arizona, USAAbstract #140. EpiTEome: Simultaneous Detection of Transposable Element Insertion Sites and their DNA Methylation Levels (Submission 106) Josquin Daron, Ohio State University, USA

25

Page 28: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Abstract #141. ACTIN-RELATED PROTEIN6 PROMOTES THE TRANSCRIPTION OF MIR156A AND MIR156C BY MEDIATING H3K4me3 DEPOSITION (Submission 109) Mingli Xu, University of Pennsylvania, USAAbstract #142. Qua Quine Starch: Insights on gene evolution (Submission 112) Seth O’Conner, Iowa State University, USAAbstract #143. Histone H1 mutations affect genomic imprinting and DNA methylation in Arabidopsis (Submission 124) Qiang Han, Saint Louis University, USAAbstract #144. Genome-wide analysis of non-canonical RNA-directed DNA Methylation mechanisms (Submission 142) Kaushik Panda, The Ohio State University, USAAbstract #145. The Identification and Analysis of Putative Origin Regions in the Arabidopsis genome (Submission 151) Emily Wheeler, NCSU, USAAbstract #146. From Chromatin to RNA: SDG8 regulates H3K36me3 and mRNA processing of gene regulatory networks underlying nutrient responses (Submission 201) Ying Li, Purdue University, USAAbstract #147. The role of Cytosolic Iron-sulfur cluster Assembly pathway in DNA demethylation and gene evolution. (Submission 214) Xiaokang Wang, Peking University, ChinaAbstract #148. Changing cell identity during development; reversal of Polycomb repression (Submission 317) Un-Sa Lee, University of Pennsylvania, USAAbstract #149. Regulatory DNA in A. thaliana can tolerate high levels of sequence divergence (Submission 339) Josh Cuperus, University of Washington, USAAbstract #150. Regulation of Nucleosome Stability and Gene Expression by Arabidopsis ATPase Brahma and the Histone Variant H2A.Z (Submission 362) Shannon Torres, Emory University, USAAbstract #151. Single-Cell Type Profiling of Chromatin Accessibility with INTACT-ATAC-seq Offers Insight into Transcriptional Regulatory Networks (Submission 363) Kelsey Maher, Emory University, USAAbstract #152. Identification of Chromatin Accessibility Changes in Plants During Cell Differentiation and Stress Response (Submission 371) Marko Bajic, Emory University, USAAbstract #153. Identification of accessible chromatin regions and transcriptional regulatory networks for Arabidopsis stem cells and mesophyll cells using ATAC-seq (Submission 372) Paja Sijacic, Emory University, USA

GENE REGULATION:Abstract #154. PPD-KIX, a conserved protein repressor complex regulating leaf growth in dicots (Submission 21) AlexandraBaekelandt,PlantSystemsBiology/UGent,BelgiumAbstract #155. Dynamic regulation of PHYTOCHROME INTERACTING FACTOR 5 (PIF5) by CONSTITUTIVE PHOTOMORPHOGENESIS 1/ SUPPRESSOR OF PHYA (COP1/ SPA) complex in Arabidopsis (Submission 27) Vinh Pham, The University of Texas at Austin, USA

Abstract #156. Mediator complex subunits Med25 and Med16 Promote Papillae Formation on Trichome Cell Walls (Submission 31) Christy Moore, Illinois State University, USAAbstract #157. Regulatory networks during seed development (Submission 57) Ran Tian, University of Kentucky, USAAbstract #158. Role of PCB1, a putative Ca2+-binding protein, in plant defense against the green peach aphid (Submission 71) Devasantosh Mohanty, University of North Texas, USAAbstract #159. Comparative and quantification analyses of RTFL/ DEVIL suppressors (Submission 195) Pin Guo, The University of Tokyo, JapanAbstract #160. A family of putative elongation factors that can promote or inhibit transcription depending on genomic context (Submission 199) Pascal Martin, Indiana University, USAAbstract #161. Analysis of Berberine Bridge Enzyme-like Family Genes Potentially Involved in Leaf Development (Submission 202) Allison Newton, Southern Illinois University - Edwardsville, USAAbstract #162. Rescue study of GGPPS (Submission 203) Toria Trost, Southern Illinois University Edwardsville, USAAbstract #163. Functional Analysis of the WRKY Transcription Factor in Green Algae (Submission 288) Kevin Cox, Texas A&M University, USAAbstract #164. Regulation of growth-defense balance by the JAZ-MYC transcriptional module (Submission 290) Qiang Guo, Michigan State University, USAAbstract #165. Differential spatiotemporal and epigenetic regulation of type I MADS-box gene expression by Polycomb Repressive Complex 2 during early endosperm development in Arabidopsis (Submission 297) Shanshan Zhang, University of Arizona, USAAbstract #166. Posttranscriptional regulation of mitochondrial gene expression in Arabidopsis (Submission 301) Ming-Hsiun Hsieh, Academia Sinica, TaiwanAbstract #167. Small RNA evolution across the Brassicaceae (Submission 304) Aleksandra Beric, Donald Danforth Plant Science Center, USAAbstract #168. Stabilization of AGO4 by single-stranded siRNA in Arabidopsis thaliana (Submission 306) WEN CHEN, University of Arizona, USAAbstract #169. Comprehensive Analysis of RDR-independent Small RNAs in Arabidopsis thaliana (Submission 308) Seth Polydore, The Pennsylvania State University, USAAbstract #170. Histone acetylation regulator CD3 mediates seed germination by enhancing ABI5 expression (Submission 311) Bo Zhao, University of Texas at Austin, USAAbstract #171. NUCLEAR FACTOR Y, subunit A (NF-YA) proteins positively regulate flowering and act through FLOWERING LOCUS T (Submission 322) Chamindika Siriwardana, University of Oklahoma, USAAbstract #172. Expression Analysis of Forked 1 and Forked-Like Genes During Development and in Response to Hormones (Submission 337) Kurtis Clarke, university of Lethbridge, Canada

26

Page 29: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Abstract #173. Transcriptional regulation of the Arabidopsis tricarboxylic acid cycle (Submission 338) Michelle Tang, UC Davis, USAAbstract #174. Cell cycle dependant regulation and function of Argonaute 1 in plants (Submission 351) Adrien Trolet, IBMP-CNRS, France

HORMONE SIGNALING:Abstract #175. RERJ1 – a wound responsive JA dependent early inducible bHLH transcription factor is involved in the rice JA-signaling system together with OsMYC2 and OsJAZ (Submission 10) Ioana Valea, The University of Tokyo, JapanAbstract #176. Abstract withdrawnAbstract #177. Identification and characterization of microRNAs involved in Brassinosteroids signaling in plants (Submission 32) Gunjan Sirohi, Guru Gobind Singh Indraprastha University, Dwarka, New Delhi, IndiaAbstract #178. Making a spiral: the role of auxin signaling in shaping shoot architecture (Submission 43) Mallorie Taylor-Teeples, University of Washington, USAAbstract #179. PLDα1 derived phosphatidic acid bind with RGS1 to modulate heterotrimeric G-protein signaling in Arabidopsis (Submission 60) Swarup Roy Choudhury, Donald Danforth Plant Science Center, USAAbstract #180. Regulation of the turnover of ACC synthases by phytohormones and heterodimerization in Arabidopsis (Submission 62) Gyeong Mee Yoon, Purdue University, USAAbstract #181. An Optimized Ribo-seq Library Preparation Method and Analysis Tool for Plants (Submission 94) Serina Mazzoni-Putman, North Carolina State University, USAAbstract #182. The octadecanoid pathway is required for nectar secretion independent of COI1 in Arabidopsis thaliana (Submission 132) Anthony Schmitt, University of Minnesota, USAAbstract #183. Cytokinin Response Factors are involved in regulating active/inactive pools of cytokinin under stress conditions (Submission 144) Aaron Rashotte, Auburn University, USAAbstract #184. Delegating development: specificity and redundancy of auxin receptors in morphology (Submission 170) Mollye Zahler, University of Washington, USAAbstract #185. (No poster) Network-Based Discovery of Brassinosteroid Regulation of Plant Growth and Drought Responses in Arabidopsis (Submission 173) Yanhai Yin, Iowa State University, USAAbstract #186. Translation Regulator AtGCN2 controls ABA Homeostasis and Stomatal Immunity in Arabidopsis (Submission 185) Xiaoyu Liu, University of Alabama at Birmingham, USAAbstract #187. Towards the Development of Biosensors for identification of endogenous KAI2 ligand (Submission 189) Aashima Khosla, University of California, Riverside, USA

Abstract #188. Using Ethyl methanesulfonate mutagenesis to screen for the suppressor of BES1 in Arabidopsis (Submission 193) Hao Jiang, Iowa State University, USAAbstract #189. Semi-rational design of a biosensor for the direct visualization of auxin (Submission 196) Ole Herud, Max Planck Institute for Developmental Biology, GermanyAbstract #190. The impact of promoter architecture on auxin-mediated transcription (Submission 216) Amy Lanctot, University of Washington, USAAbstract #191. Brassinosteroid regulation of vascular development: a cell-type-specific transcriptomic approach (Submission 222) Isabel Betegon, CRAG, SpainAbstract #192. Arabidopsis WRKY46, WRKY54 and WRKY70 Transcription Factors Are Involved in Brassinosteroid-Regulated Plant Growth and Drought Response (Submission 232) Jiani Chen, Iowa State University, USAAbstract #193. The clathrin adaptor ENTH regulates plasma membrane protein abundance for effective hormone efflux (Submission 236) Erica LaMontagne, University of Missouri, USAAbstract #194. Identification of auxin pathway components in root system development using GWAS (Submission 245) Takehiko Ogura, GMI-Gregor Mendel Institute, AustriaAbstract #195. Auxin-activated ion transport by ABCB4 and PIN2 proteins required for polar auxin transport in Arabidopsis (Submission 253) Edgar Spalding, University of Wisconsin, USAAbstract #196. Chemical genetic dissection of salicylic acid signaling in Arabidopsis thaliana (Submission 303) Vivek Halder, Max Planck Institute for Plant Breeding Research, GermanyAbstract #197. Investigating SMAX1 Degradation in the Karrikin Signaling Pathway (Submission 323) Nicholas Morffy, University of Georgia, USAAbstract #198. Quantitative analysis of ethylene response in Arabidopsis thaliana mutants using infrared imaging (Submission 324) David Bullock, North Carolina State University, USAAbstract #199. Investigating IBA influx (Submission 335) Imani Madison, Washington University in St. Louis, USAAbstract #200. Integrators of agronomically important signaling pathways identified in a systematic Arabidopsis phytohormone network map (Submission 343) Pascal Falter-Braun, Institute of Network Biology (INET) - Helmholtz Zentrum München, GermanyAbstract #201. Cytokinin signaling and misfolded protein accumulation in the model plant, Arabidopsis thaliana (Submission 348) Sumudu Karunadasa, University of Kentucky, USAAbstract #202. The Roles of Auxin and Cytokinin Signaling in the Onset and Maintenance of Cambium Activity in Arabidopsis Root (Submission 352) Tiina Blomster, University of Helsinki, FinlandAbstract #203. Investigating the Role of Protein Multimerization in ARF Transcription Factor Activity (Submission 358) Samantha Powers, Washington University in St. Louis, USA

27

Page 30: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Abstract #204. Investigating the role of oxidized JA in plant growth and defense response (Submission 373) Arati N. Poudel, University of Missouri, Columbia, USAAbstract #205. Cytokinin regulation of a potassium transport module occurs in an a CRF6-dependent manner (Submission 376) Ariel Hughes, Auburn University, USAAbstract #206. Enhancer Screen to Identify IBA Response Mutants Reveals Interaction Between Peroxisomal Metabolic Pathways (Submission 377) Vanessica Jawahir, University of Missouri St. Louis, USAAbstract #207. Modulation of ABA core signaling pathway components expression rely on mRNA stability control and phosphorylation activity (Submission 382) João Guilherme Portugal Vieira, University of Campinas, BrazilAbstract #208. SRFR1, a negative regulator in plant immunity, negatively regulates phosphate starvation response (PSR) by modulating ethylene biosynthesis (Submission 388) Jianbin Su, University of Missouri, USA

METABOLISM AND BIOCHEMISTRY:Abstract #209. Identification and characterization of candidate genes involved in flavonoid biosynthesis and regulation (Submission 135) Nan Jiang, The Ohio State University, USAAbstract #210. Interrogating the biochemical activities underlying cellular GA distribution gradients (Submission 215) Annalisa Rizza, The Sainsbury Laboratory, United KingdomAbstract #211. Spectroscopic and Photochemical Analyses of Recombinantly-Expressed Phytochromes from Arabidopsis (Submission 241) Weiming Hu, Washington University in St. Louis, USAAbstract #212. Regulation of Cell Wall Strength and Salt tolerance by the Arabidopsis MUR4 (Submission 264) Omar Zayed, Purdue University, USAAbstract #213. Arabidopsis Bax inhibitor-1 promote VLCFA synthesis through the interaction with VLCFA-related enzymes (Submission 285) Minoru Nagano, Saitama University, JapanAbstract #214. Control of plant growth by differential light/temperature entrainment of the clock: phase shifts in clock-gene expression and carbohydrate metabolism (Submission 315) Mark van Hoogdalem, Wageningen University, NetherlandsAbstract #215. WithdrawnAbstract #216. Understanding the crosstalk between carbohydrate transport and phosphate use in plants with enhanced phloem partitioning from source to sink (Submission 341) Mearaj Shaikh, University of North texas, USAAbstract #217. Functional Characterization of a New Cytochrome P450 Reductase Gene Relevant to Artemisinin Biosynthesis (Submission 368) Rika Judd, North Carolina State University, USAAbstract #218. The transcription factor bZIP63 modulates starch degradation (Submission 379) Américo José Carvalho Viana, State University os Campinas - Unicamp, Brazil

NATURAL VARIATION, EVOLUTION, ECOLOGY:Abstract #219. The evolution of gene regulatory networks confers stress tolerance within the Brassicaceae (Submission 38) Ying Sun, Stanford, USAAbstract #220. Comparative analysis of distinct responses of Arabidopsis natural variations to N deficiency (Submission 53) Atsushi Mabuchi, Kyushu University, JapanAbstract #221. The Structural Consequences of Polyploidy in Arabidopsis thaliana (Submission 59) Evan Pacey, University of Guelph, CanadaAbstract #222. (No poster) Multi-trait genome-wide association mapping reveals the genetic architecture of plant stress resistance (Submission 87) Manus Thoen, UChicago, USAAbstract #223. The effect of structural variation on crossover positioning in Arabiopsis thaliana (Submission 92) Beth Rowan, University of California, Davis, USAAbstract #224. Understanding molecular variation in the RNA polymerase V Ago-binding platform (Submission 117) Joshua Trujillo, University of Arizona, USAAbstract #225. High- and low-affinity ammonium transporters in Marchantia polymorpha (Submission 131) Nu Wang, University of Minnesota, USAAbstract #226. Asymmetric evolution of transcription factor expression and regulation in Arabidopsis thaliana (Submission 175) Nicholas Panchy, Michigan State University, USAAbstract #227. Exploring the variation of ecophysiological traits within a biparental and genetically diverse population of natural accessions of Setaria (Submission 225) Max Feldman, Donald Danforth Plant Science Center, USA

NOVEL TOOLS, TECHNIQUES AND RESOURCES:Abstract #228. Applications of CRIPSR/Cas9 breeding using flowering stimulation and precision lighting (Submission 33) Juan Matte, Pontificia Universidad Catolica de Chile, ChileAbstract #229. Using phylogeny of proteins to predict signaling partners in plant immunity (Submission 265) Dmitry Lapin, Max-Planck Institute for Plant Breeding, GermanyAbstract #230. Identifying Argonaute-RNA target interactions in vivo through AGO-mediated target covalent modifications (Submission 296) Pedro Costa-Nunes, Donald Danforth Plant Science Center, USAAbstract #231. PlaMoM: a comprehensive database compiles plant mobile macromolecules (Submission 321) Shoudong Zhang, Hong Kong Baptist University, Hong KongAbstract #232. Development of the database for the bio-resources of Arabidopsis at RIKEN BRC (Submission 330) Satoshi Iuchi, RIKEN, JapanAbstract #233. A Comprehensive Ionomics Screen of Arabidopsis thaliana T-DNA Insertion Lines (Submission 386) Jennifer Barrett, Donald Danforth Plant Science Center, USA

28

Page 31: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

PLANT DEFENSE AND BIOTIC INTERACTIONS:Abstract #234. A phenotype and genotype study in Arabidopsis thaliana in response to Turnip mosaic virus in a natural environment. Are metabolic traits markers of the plant response to viral infection? (Submission 42) Bernadette Rubio, INRA, FranceAbstract #235. The EDR1 Protein Kinase Inhibits EDS1 and PAD4 Signaling (Submission 47) Matthew Neubauer, Indiana University, USAAbstract #236. Diverse mechanisms of resistance to Pseudomonas syringae in a thousand natural accessions of Arabidopsis thaliana (Submission 48) Andre Velasquez, Michigan State University, USAAbstract #237. An RNA binding protein altered in phosphorylation state in response to Plant Elicitor Peptides is a negative regulator of plant innate immunity (Submission 49) Keini Dressano, UCSD, USAAbstract #238. Structure - function analysis of Arabidopsis EDS1 immune signalling complexes (Submission 65) Deepak Bhandari, Max Planck Institute for plant breeding research, GermanyAbstract #239. Pathogen Infection and MORC proteins Affect Chromatin Accessibility of Transposable Elements and Expression of Their Proximal Genes in Arabidopsis (Submission 66) Yogendra Bordiya, Texas State University, USAAbstract #240. Role of a WRKY Transcription Factor in Arabidopsis thaliana Interaction with the Green Peach Aphid, Myzus persicae (Submission 70) Monika Patel, University of North Texas, USAAbstract #241. Genetic Dissection of Arabidopsis MAP Kinase Phosphatase 1 (AtMKP1)-dependent PAMP-induced transcriptional responses (Submission 78) Lingyan Jiang, University of Missouri-Columba, USAAbstract #242. RKS1, an atypical kinase involved in quantitative disease resistance against Xanthomonas campestris (Submission 84) Ullrich Dubiella, CNRS-LIPM, FranceAbstract #243. Extracellular vesicles isolated from the apoplast of Arabidopsis leaves carry stress-response proteins and microRNAs (Submission 86) Brian Rutter, Indiana University, USAAbstract #244. Can plants sense mechanical stimuli and activate mechanically triggered immunity? (Submission 89) Debarati Basu, Washington University in St. Louis, USAAbstract #245. A Plant Immune Receptor Detects Pathogen Effectors that Target WRKY Transcription Factors (Submission 90) Zane Duxbury, The Sainsbury Laboratory, United KingdomAbstract #246. Regulation of expression of plant immune receptor gene SNC1 in Arabidopsis (Submission 91) Leiyun Yang, Cornell University, USAAbstract #247. (No poster) Direct and indirect Epigenetic Regulation on plant NLRs expression through a chromatin remodeling protein (Submission 95) Chien Yu Huang, UCR Plant Pathology and Microbiology, USA

Abstract #248. A Lipid-Associated Protein MOR1 is a Novel Temperature-dependent Regulator of Plant Immune Responses (Submission 103) Jiapei Yan, Cornell University, USAAbstract #249. Stomatal immunity is cell autonomous and uncoupled from guard cell ABA signalling (Submission 104) Janina Tamborski, The Sainsbury Laboratory, United KingdomAbstract #250. A Systems Biology-aided Investigation of Pathogen-mediated Manipulation of Sugar Metabolism in Arabidopsis (Submission 105) Yali Sun, University of Alabama at Birmingham, USAAbstract #251. Dual impact of elevated temperature on plant defense and bacterial virulence in Arabidopsis (Submission 107) Bethany Huot, Michigan State University, USAAbstract #252. Plasmodesmata at the Intersection of Bacterial Pathogenesis and Plant Immunity (Submission 119) Kyaw Aung, MSU, USAAbstract #253. A Chloroplast/Peroxisome-localized Lipase-like Protein Regulates Arabidopsis Immune Gene Expression and Defense Responses (Submission 120) Chenglong Liu, Texas A&M University, USAAbstract #254. Leaf shedding as a bacterial defense in Arabidopsis cauline leaves (Submission 121) Rahul Patharkar, University of Missouri, USAAbstract #255. Elongator is a key regulator of plant immunity in Arabidopsis (Submission 123) Zhonglin Mou, University of Florida, USAAbstract #256. Transcriptional regulation of the plant immune transcription coactivator NPR1 (Submission 125) Matthew Dommel, University of Florida, USAAbstract #257. A Coin with Two Sides: Probing Non-Pathogenic versus Pathogenic interactions using the Fusarium oxysporum - Arabidopsis thaliana pathosystem (Submission 130) Kathryn Vescio, University of Massachusetts, USAAbstract #258. The TIR protein RBA1 functions as a novel “truncated” NLR-like immune receptor (Submission 152) Marc Nishimura, Colorado State University, USAAbstract #259. Dual negative modulations of PTI signaling by two types of calcium signaling components (Submission 154) You Lu, University of Minnesota, Twin Cities, USAAbstract #260. The mutant increased suppression of TBF1-8 (ist8) offers new insight into posttranscriptional regulation of immune response in Arabidopsis. (Submission 156) Paul Zwack, Duke University, USAAbstract #261. Differential effects of pectin defects on cell wall composition, growth, and immunity (Submission 159) Gerit Bethke, University of Minnesota, USAAbstract #262. A novel function for an orphan gene in mediating pathogen and pest resistance (Submission 165) Ling Li, Mississippi State University, USAAbstract #263. A cytokinin-regulated transcriptional switch between growth and defense (Submission 180) Cris Argueso, colorado state university, USAAbstract #264. BOTRYTIS-INDUCED KINASE1 regulates Arabidopsis resistance against aphids through suppressing cell death (Submission 186) JIAXIN LEI, Texas A&M university, USA

29

Page 32: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Abstract #265. Roles and Programming of ARGONAUTE Proteins during Turnip Crinkle Virus Infection in Arabidopsis (Submission 187) Xingguo Zheng, Donald Danforth Plant Science Center, USAAbstract #266. A novel functional genomics approach reveals previously unrecognized regulators of plant defenses (Submission 188) Jose Pruneda-Paz, UCSD, USAAbstract #267. Examining mobile small RNAs exchanged between the parasitic plant dodder and its host (Submission 235) Nathan Johnson, Penn State University, USAAbstract #268. Novel roles of dynamin-related protein network in flg22-signaling and innate immunity against bacteria (Submission 237) Antje Heese, University of Missouri-Columbia, USAAbstract #269. Role of Volatile Organic Compounds in Plant Symbiotic and Defense Signaling Pathways (Submission 243) Muthusubramanian Venkateshwaran, University of Wisconsin-Platteville, USAAbstract #270. The Arabidopsis alf3-1 mutation causes autoimmunity in the root and identifies a TIR domain protein (Submission 318) Sanda Zolj, Boston University, USAAbstract #271. TSA1 is accelerator of ER body formation upon wound-related stress (Submission 320) KyoungRok Geem, POSTECH, Korea, Republic ofAbstract #272. GhWAK1 interacts with GhLYK5 and promotes chitin induced GhLYK5-GhLYK1 association in cotton defense response (Submission 328) Ping Wang, Texas A&M university, USAAbstract #273. Plant Paralysis: Local pathogen infection suppresses systemic plant growth and leaf movements (Submission 345) Adam Seroka, Michigan State University, USAAbstract #274. The master transcription cofactor NPR1 represses transcription factors to up- and downregulate two immune signals dependent on transcriptional context (Submission 353) Mika Nomoto, Nagoya University, JapanAbstract #275. Defense Compound Production in the Oilseed Crop Camelina sativa (Submission 361) John Celenza, Boston University, USAAbstract #276. Bacteria establish an aqueous living space as a crucial pathogenesis mechanism (Submission 364) Xiufang Xin, Michigan State University, USAAbstract #277. A novel dimeric Medicago defensin MtDef5 confers strong resistance to obligate oomycete biotrophic pathogen Hyaloperonospora arabidopsidis in transgenic Arabidopsis (Submission 365) Kazi Islam, Donald Danforth Center, USAAbstract #278. Re-Locating RPS5 Based Resistance (Submission 369) Sarah Pottinger, Indiana University, USAAbstract #279. Cell-wall-based regulation of stomatal defense in Arabidopsis (Submission 380) yanjuan jiang, MSU, USA

Abstract #280. Interactions of Arabidopsis SRFR1, a negative regulator of effector-triggered immunity, with transcription factors and transcriptional co-repressors (Submission 381) Christopher Garner, University of Missouri, USAAbstract #281. Formation and Pathogen Manipulation of Receptor-Like Kinase Complexes (Submission 383) Timothy Howton, University of Alabama at Birmingham, USAAbstract #282. Exploring a novel role for TCP transcription factors in plant innate immunity (Submission 384) Benjamin Spears, University of Missouri, Columbia, USA

POST-TRANSLATIONAL REGULATION:Abstract #283. (No poster) Disentangling protein degradation mechanisms of plant circadian clocks (Submission 29) Joshua Gendron, Yale University, USAAbstract #284. (No poster) The F-Box Protein-Mediated Proteolytic Regulation of Phenylpropanoid Metabolism (Submission 39) Chang-Jun Liu, Brookhaven National Labortory, USAAbstract #285. Cysteine-rich receptor-like kinases control ROS production and signaling (Submission 45) Michael Wrzaczek, University of Helsinki, FinlandAbstract #286. Multiple Gene Duplication Mechanisms Contributed Differentially to the Expansion of the Ubiquitin and Ubiquitin-Like Protein Modifier Superfamily in Plants (Submission 54) Zhihua Hua, Ohio University, USAAbstract #287. Post-translational regulation of carotenogenic rate-limiting enzyme phytoene synthase comprises proteolysis by Clp protease and stabilization by ORANGE protein (Submission79)LiLi,USDA-ARS/CornellUniversity,USAAbstract #288. F-box decoys reveal the genetic and biochemical roles of plant E3 ubiquitin ligases in plant circadian clock (Submission 82) Chin-Mei Lee, Yale University, USAAbstract #289. Defining the O2/NO responsive N-end rule degradome in Arabidopsis (Submission 85) Gunjan Sharma, University of Nottingham, United KingdomAbstract #290. Thioredoxins as versatile redox regulators of photosynthetic metabolism in fluctuating light environments (Submission 99) Ina Thormählen, Ludwig Maximilians University Munich, GermanyAbstract #291. A plant-specific chaperone required for 26S proteasome assembly (Submission 145) Richard Marshall, Washington University in St. Louis, USAAbstract #292. Mechanism of RNS-dependent S-Nitrosation and Denitrosation of Cytoplasmic S-Nitrosoglutathione Reductase (GSNOR) from Arabidopsis thaliana (Submission 155) Patrick Treffon, University of Massachusetts Amherst, USAAbstract #293. Protein Disaggregase HSP101 Interacts with the 26S Proteasome and Facilitates Protein Degradation. (Submission 157) Fionn McLoughlin, Washington University, USAAbstract #294. Mass Spectrometric Dissection of the SUMOylation System in Arabidopsis thaliana (Submission 160) Samuel York, Washington University in St. Louis, USA

30

Page 33: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Abstract #295. Selective Autophagy of BES1 Mediated by Ubiquitin Receptor DSK2 and E3 Ubiquitin Ligase SINAT2 Balances Plant Growth and Survival (Submission 172) Trevor Nolan, Iowa State University, USAAbstract #296. The interplay between alternative polyadenylation and RNA quality control as a potential mechanism to respond to environmental stress in Arabidopsis (Submission 177) Laura de Lorenzo, University of Kentucky, USAAbstract #297. Light Dependent Degradation of PIF3 via SCFEBF1/2 Promotes the Photomorphogenic Response in Arabidopsis (Submission 207) JIE DONG, Yale University, USAAbstract #298. Protein-protein interaction network and metabolite channeling in plant mitochondrial tricarboxylic acid cycle (Submission 233) Toshihiro Obata, University of Nebraska Lincoln, USAAbstract #299. Regulation of AGO1 homeostasis by the F-box protein FBW2 (Submission 305) Thibaut Hacquard, IBMP-CNRS, FranceAbstract #300. Does the circadian clock regulate ribosomal protein S6 phosphorylation? (Submission 344) Ramya Enganti, University of Tennessee Knoxville, USAAbstract #301. Exploration of regulatory mechanisms underlying ABA-independent SnRK2s activation under osmotic stress conditions (Submission 350) Junro Mogami, The University of Tokyo, Japan

STRUCTURAL BIOLOGY:Abstract #302. Photosensing and Thermosensing by Phytochrome B Requires both Proximal and Distal Feature within the Dimeric Photoreceptor (Submission 143) Ernest Burgie, Washington University in St. Louis, USAAbstract #303. (No poster) Mechanistic insights into floral shedding (Submission 209) Julia Santiago, University of Lausanne, SwitzerlandAbstract #304. An Arabidopsis MUB E2 Structure Reveals New Regulatory Opportunities in the Ubiquitin System (Submission 247) Brian Downes, Saint Louis University, USAAbstract #305. Evolutionary conservation of structure and function in the plant aldehyde dehydrogenase 12 family (Submission 259) David Korasick, University of Missouri-Columbia, USAAbstract #306. Signaling mechanism of UV-B photoreceptor from Arabidopsis (Submission 260) Xiaojing Yang, University of Illinois at Chicago, USA

SYSTEMS OR SYNTHETIC BIOLOGY, BIOINFORMATICS, MODELING:Abstract #307. Assembling the Arabidopsis Mitochondrial DNA Replisome (Submission 126) Stewart Morley, Brigham Young University, USAAbstract #308. Prolines in transit peptides are crucial for efficient translocation of preproteins into chloroplasts (Submission 276) Dong Wook Lee, Pohang University of Science and Technology, Republic of Korea

Abstract #309. Synthetic Approach Reveals Dynamic Auxin Signaling in Arabidopsis and Maize (Submission 374) Britney Moss, Whitman College, USAAbstract #310. Araport: The Arabidopsis Information Portal (Submission 378) Chris Town, J. Craig Venter Institute, USAAbstract #311. Modeling the transcriptional circuit regulating secondary cell wall biosynthesis (Submission 385) Gina Turco, UC Davis, USA

TRANSLATIONAL BIOLOGY:Abstract #312. Effect of higher ploidy levels on plant growth and biomass composition (Submission 22) Sander Corneillie, VIB-UGent, BelgiumAbstract #313. Rapidly domesticating the new oilseed crop pennycress (Thlaspi arvense) by translating findings from Arabidopsis research (Submission 68) Michaela McGinn, Illinois State University, USAAbstract #314. Stress granules-mediated translational control of the plant immunity triggered by salicylic acid (Submission 69) Mian Zhou, Iowa State University, USAAbstract #315. (No poster) The Arabidopsis thaliana MYB transcription factor ETC2 confers higher yield and seed size in transgenic soybean (Glycine max) (Submission 77) Wusheng Liu, University of Tennessee, Knoxville, USAAbstract #316. Phenotyping Solutions for Basic and Applied Research in Plant Biology and Agriculture (Submission 116) Todd DeZwaan, LemnaTec Corporation, USAAbstract #317. A tightly regulated genetic selection system with signaling-active alleles of phytochrome B (Submission 134) Wei Hu, University of California Davis, USAAbstract #318. (No poster) Targeted phenylalanine in seedling development: coatings to reduce cellular stress (agriculture), and development of nutraceutical extracts (medicine) (Submission 138) Kate Warpeha, University of Illinois at Chicago, USAAbstract #319. Abstract withdrawnAbstract #320. Investigating the molecular, physiological, and architectural changes that underlie grafting-induced vigor (Submission 246) Margaret Frank, Donald Danforth Plant Science Center, USAAbstract #321. The origin and evolution of a sex chromosome pair in garden asparagus (Submission 248) Alex Harkess, Donald Danforth Plant Science Center, USA

LATE ABSTRACT SUBMISSIONS:Abstract #322. Expression profile of stress-responsive Arabidopsis thaliana miRNAs and their target genes in response to inoculation with Pectobacterium carotovorum subsp. Carotovorum. A. T. Djami-Tchatchou, Department of Agriculture and Animal Health, University of South Africa, South AfricaAbstract #323. Systematic discovery of novel eukaryotic transcriptional regulators using non-sequence homology based prediction. Seung Y. Rhee, Carnegie Institution for Science, USA

31

Page 34: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Transportation to Hyatt from the St. Louis Airport

Airport shuttle discounts for ICAR 2017 attendees: 20% off tripsbookednolaterthan11:50PMonJune152017.https://gobestexpress.com/reservations?code=ICAR2017

St. Louis Light Rail at the St. Louis Airport: MetroLink is the St. Louis metropolitan region’s light rail system and is operated by Metro as part of a fully integrated regional transportation system. Metrolink Station Terminal 1 is at Exit Door 1, Ticketing Level, east of all ticket counters. Metrolink Station Terminal 2 is at Exit Door 12, through the parking garage. Cost: $2.50 USD eachtrip:http://www.metrostlouis.org/TicketVendingMachinesare located at all MetroLink stations and will accept one, five, ten and twenty dollar bills for any transaction, as well as Visa, MasterCard and Discover.

ClosestMetrostoptotheHyatt/ICAR:Cornerof8th street and Pinestreet.Located0.3miles/0.5km,a6-minutewalk,fromtheHyatt. Address: 315 Chestnut Street.

Taxis at the St. Louis Airport: Approximately $36-$47 each way, to the Hyatt Regency, at the Arch. Address: 315 Chestnut Street.

Passenger Pickup: Terminal: 1 Exit Door 14 to 1 Garage Yellow Level;Terminal:2ExitDoor12.

ADA accessible taxis are available through the following companies: Airport On-Call Taxicabs (see Taxi Booth for information);MetroWestTransport(calltoreserveADAtaxicabat (636) 272-TAXI or visit http://www.metrowesttaxi.net);Formore information regarding Airport Taxis, please visit http://www.stlouislamberttaxi.com

Transportation to the WashU Dorms from the St. Louis Airport, and to/from the Hyatt; Dorm Information

To the dorms from Lambert St. Louis Airport on MetroLink: Board the train at the airport and exit at the Forest Park-DeBaliviere station. Take the next train headed for Shrewsbury Station. Exit the train at the University City-big Bend Station. Then it is an approximately 10-minute walk south on Big Bend Blvd, turning left on Shepley Drive to arrive at Summer Programs & Conferences; Umrath House; 6618 Shepley Drive; Suite 1950;Clayton,MO63105.DormContactInformation:SummerPrograms & Conferences Front Desk: Phone: (1+) 314-935-5015, WashUPoliceDepartmentforafter-hourslockouts/concerns:(+1)314-935-5555. Office Hours: Monday – Friday: 9:00 a.m. – 12:00 a.m. (midnight) Saturday – Sunday: 12:00 p.m. (noon) – 12:00 a.m. (midnight).

TotheHyatt/ConferencefromtheDormsonMetroLink: The travel time from the WashU residence halls is approximately 35minutes.Takean18-20-minutedirectmetro/lightrailtripfrom the University-Big Bend metro station and exit at the 8th and Pine metro station (no transfers needed, $2.50 each way).ExitingonPineSt.walkeastfor0.3miles/6minutes;theHyatt is at the corner of Pine and North 4th Street (address: 315 Chestnut Street, St. Louis, MO 63102)

Dorm:Checkin/outrules:Checkinisavailableatvarioustimes.Participants that need to check in outside daylight hours may need to go to the conference management office (address above) between2:30-midnight(Monday-Friday)andSaturday/Sundaynoon-midnight. After midnight arrivals will go to the campus police department (Lien House on Shepley Drive, across the street from the Summer Programs Office, described above) and they will escort you to your room after calling the on-call student supervisor.

Dorm Check out by 11 am on check out day. For most ICAR attendees this will be Friday June 23. Since the conference program ends after this time, you should pack your belongings and completely leave your room before traveling to the Hyatt that morning.

TherewillbefreeandsecureluggagestorageattheHyatt/Conference site for your belongings during the final sessions on Friday June 23. Note: There is a $200 room charge if you do not vacate by 11 am on check out day and the participant will be denied access to room.

Dorm Contact Information: Summer Programs & Conferences Front Desk: Phone: (1+) 314-935-5015, WashU Police Department forafter-hourslockouts/concerns:(+1)314-935-5555.OfficeHours: Monday – Friday: 9:00 a.m. – 12:00 a.m. (midnight) Saturday – Sunday: 12:00 p.m. (noon) – 12:00 a.m. (midnight).

Registration/Information Desk

Registration desk Open Hours at the Hyatt Regency, St. Louis at the Arch: Grand Ballroom Coatroom, 4th floor:Monday, June 19: 12:00pm- 8:30pmTuesday, June 20: 8:00am - 6:30pmWednesday, June 21: 8:00am - 11:30amThursday, June 22: 8:00am - 6:30pm*Friday June 23: Registration booth is replaced by Luggage Hold: 7:00 am – 3:00 pm (Park View Room)

Your registration fee includes the following

ICAR delegate kit and name badge

Kit includes bag, pen, printed program and USB drive containing the full program and full abstracts

OpeningReception,Coffee/TeaBreaks(7),Lunches(2)

Attendance at Plenary, Concurrent, and Poster sessions

Community-organized workshops on Tuesday and Thursday

Refreshments at Poster sessions (2)

Name Badge and Separate Ticketed Activities

Admissiontoallconferenceactivitiesarebynamebadge;pleasewear your badge at all times, even for ticketed events. There are several activities at ICAR that require separate purchased ticket. These include: June 19: Careers Beyond the Academy Panel (1:30-3pm);June21:WeedStampede-5KFunRun/Walk(7-8am);June21:CareersinIndustryPanelandNetworkingSocialattheDanforthCenter(4:15-6:30pm);June21:OfficialConferenceParty at the Danforth Center (6:30-10:30 pm)

General Information for ICAR 2017

32

Page 35: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Opening Keynote Lecture and Welcome Reception

The Opening Keynote Lecture will be held June 19 from 6:30-7:30 pm in Grand Ballroom Room EFGH. The Conference Welcome Reception will follow in the Grand Foyer from 7:30pm to 9:30pm. Note: the first plenary sessions begin at 3:30 pm in Grand EFGH.

Conference Party with Live Music and Dancing

The banquet is a ticketed event and will be held off-site at the Donald Danforth Plant Science Center on Wednesday June 21: 6:30-10:30 pm. Complimentary tours of the Danforth Center will be available to a limited number of party attendees. Transportation between the Hyatt and the Danforth Center will be provided to paid ticket holders of the party and the pre-party Careers in Industry event.

Oral Presentation Guidelines- for all speakers (invited and selected from abstracts)- Location: Mills 2, 4th Floor Hyatt

Please save your oral presentation onto a USB drive in either .pptx or .ppt format. Presentations must be loaded onto conference-provided laptops prior to the start of your session. You will be provided a USB drive when you register (containing the abstracts and full program) which has additional space for files.Below is a table of prioritized times for speakers to

DAY/TIME FIRST PRIORITY TO LOAD TALKS SECOND PRIORITY TO LOAD TALKSMonday June 19 1-6 pmLocation: Mills 2

Hormone Signaling and Biotic Interactions Plenary SpeakersOpening Keynote Lecture: Sabeeha MerchantTuesday Morning Cell and Developmental Biology and Abiotic Interactions Plenary Speakers

All Tuesday afternoon Concurrent Session Speakers: Epigenetics/Chromatin;PlantDefenseandBioticInteractions;CellandDevelopmentalBiology1;Post-translational RegulationTuesday afternoon Workshop Speakers

Tuesday June 20 8 am- 1 pmLocation: Mills 2

Tuesday Morning Cell and Developmental Biology and Abiotic Interactions Plenary SpeakersAll Tuesday afternoon Concurrent Session Speakers: Epigenetics/Chromatin;PlantDefenseandBioticInteractions;CellandDevelopmentalBiology1;Post-translational RegulationTuesday afternoon Workshop SpeakersSecond Keynote Lecture: Mary Lou Guerinot

Wednesday Morning Modeling, Gene Regulation, Systems, Quantitative, Computational Biology and Natural Variation, Evolution and Ecology Plenary Speakers

Wednesday June 21 8 am- 1 pmLocation: Mills 2

Wednesday Morning Modeling, Gene Regulation, Systems, Quantitative, Computational Biology and Natural Variation, Evolution and Ecology Plenary Speakers

Thursday Morning Epigenetics and Chromatin Plenary SpeakersThursday Morning Concurrent Session Speakers: Cell andDevelopmentalBiology2;TranslationalBiology

Thursday June 22 8 am- 1 pmLocation: Mills 2

Thursday Morning Epigenetics and Chromatin Plenary SpeakersThursday Morning Concurrent Session Speakers: Cell andDevelopmentalBiology2;TranslationalBiologyThursday Afternoon Concurrent Session Speakers: NaturalVariation,Ecology,andEvolution;HormoneSignaling;StructuralBiology;AbioticInteractionsThursday afternoon Workshop SpeakersThird Keynote Lecture: Keiko Torii

Friday Morning Novel Approaches Plenary SpeakersFriday Morning Keynote Lecture: Sheng Yang HeFriday Closing Presentations

load talks. We highly recommend that all Tuesday morning speakers load their talks on Monday (opening day). You will be allowed to load your talk if you come outside of your prioritized timeframe, however, we may ask you to wait to accommodate invited speakers that speak earlier in the program (and are in the prioritized window.)

1. We will have additional laptops in the speaker-ready room if you wish to quickly review your slides, however you will not be able to do significant editing on the shared laptops so that we can accommodate as many people as possible.

2. You must load your talk no later than 1.5 hours prior to your session start time, andideallyseveralhours/1daybefore.

3. Note the speaker ready room hours below carefully. If your sessionisTue/Wed/Thursafternoon(e.g.2or4pm)you must load your talk no later than 1 pm that day.

4. We will be unable to load talks during the sessions as the program is very tight. Therefore, please have your presentations complete when you arrive in St. Louis, particularly if you are speaking on the second day (Tuesday), so your talk can be loaded on Monday.

5. The conference supplies PC laptops and you must load your talk onto the conference PC laptops (as outlined in the table).

33

Page 36: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Conference Exhibition and Poster Sessions - Poster Session and Exhibition Hours

DAY/TIME ACTIVITIES POSTERS PRESENTEDMonday June 19

12:00-7:30 pm: Exhibitor Set Up12:00-8:30 pm: Poster Set Up

TuesdayJune 20

8 am – 12 pm: Poster Set up Continues12:30-2 pm: Lunch with exhibitors, informal poster viewing2 – 8 pm: Posters up for informal viewing

TuesdayJune 208 pm -10:30 pm

8- 9 pm: Exclusive Poster Session 18-10:30 pm: Exhibit Hall Opening Reception8-10:30 pm: Vendor Booths Open

Snacks and drink ticket provided Cash bar available

8-9 pm: Odd-numbered abstracts: presenters stand by their posters. Note your abstract number is not the same as your original submission. Note your new abstract number in the conference program.9 pm: Odd- numbered poster presenters may stay by their poster or browse other posters and visit exhibit booths

WednesdayJune 21 8 am – 12:30 pm: No exhibit or poster session scheduled but open for browsing or informal meetings

ThursdayJune 22

8 am – 12:30 pm: No exhibit or poster session scheduled but open for browsing or informal meetings12:30-2 pm: Lunch with exhibitors and informal poster browsing2 – 8 pm: Posters up for informal browsing

ThursdayJune 228 am- 1 pm

8- 9 pm: Exclusive Poster Session 28-9:30 pm: Vendor Booths OpenSnacks and drink ticket provided Cash bar available9:30 pm -10:30 pm: Poster and Exhibit Booth DismantlingPosters not removed by 10:30 pm will be discarded

8-9 pm: Even-numbered abstracts: presenters stand by their posters. Note your abstract number is not the same as your original submission. Note your new abstract number in the conference program.9 pm: Even-numbered poster presenters may stay by their poster or browse other posters and visit exhibit booths

Coffee/Tea Breaks

Coffee breaks for registered attendees are held in the Grand Foyer:Monday19June:3-3:30pmand4:30-5pm;Tuesday20June:10:30-11amand3:30-4pm;Wednesday21June:11-11:30am;Thursday22June:10:30-11amand3:30-4pm;Friday23June: 10:30-11 am

Responsibility

The Organizing Committee assumes no responsibility for accident, losses, damage, delays, or any modifications to the program arising from unforeseen circumstances. It accepts no responsibility for travel or accommodation arrangements.

The participant acknowledges that he or she has no right to lodge damage claims against the Organizing Committee should the conference proceedings be hindered or prevented by unexpected political or economic events or generally by acts of God, or should the non-appearance of speakers or other reasons necessitate program changes.

Internet Access

Wireless Internet access is complimentary in the Hyatt sleeping rooms for guests of the Hyatt. The organizers will purchase wi-fi for conference attendees throughout the ballroom and the workshop rooms, however the strength of signal, or that all devices may be accommodated (e.g. if attendees have multiple devices), cannot be guaranteed.

Social Activities

Monday June 19: 7:30-9:30 pm: Opening Welcome Reception (drinks,snacks;1ticketincludedineachregistration)

TuesdayJune20:8:00-10:30pm:PosterSessionI/ExhibitHallOpeningReception(drinks,snacks;1ticketincludedineachregistration)

Wednesday June 21: 7:00 - 8:00 am. “Weed Stampede” 5K Fun Run/WalkadjacenttotheHyattattheArch($5ticket)

Wednesday June 21: 5:30 - 6:30 pm. Danforth Center: Social hour with industry members and attendees of ‘Careers in Industry’ panel and discussion (4:15-5:30 pm, $20 ticket, limited tickets available)

Wednesday June 21: 6:30 - 10:30 pm. Danforth Center: Official ICAR 2017 Conference Party; includes food, drinks, optional Danforth Center Tours, live music (VO5 Dance Party). Ticket price ranges from $25-$75 (limited tickets available). Against the backdrop of the gorgeous atrium of the Danforth Plant Science Center, the nine-piece dance band VO5 will be performing a mix of funk, pop, and disco to the likes of the Bee Gees, Abba, Sly & the Family Stone, the Jackson Five, and Earth Wind and Fire. Voted one of the best dance bands in the Midwest, this will be a great time to socialize and enjoy St. Louis’ finest libations.

ThursdayJune22:8:00-9:45pm:PosterSession2/ExhibitHallReception(drinks,snacks;1ticketincludedineachregistration)

34

Page 37: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

RESTAURANTS/EATERIES, PARKING AND SERVICES AT, AND NEAR, THE CONFERENCE

In the HyattBrewhouse Historical Sports Bar (lunch. dinner, open til midnight/12am,HappyHourSunday-Thursday3pm-6pm).Enjoy vibrant nightlife, a huge selection of local brews, and delicious food at our St. Louis sports bar. The Brewhouse features HDTVs, a state-of-the-art sound system, and numerous DIRECTV sports packages and beer on tap making it one of the best sports bars in St. Louis, Missouri. Red Kitchen (breakfast, lunch, and dinner)Starbucks(coffee,lightmeals;alsooutsideHyattat521OliveSt, Millennium Center)Ruth’s Chris Steakhouse (dinner)

Near the Hyatt, within walking distance (note this is only a subset of what may be available)Grocery/diningstore:Culinaria/Schnucks#301.Open6am–9pm.Urban,hybridmarketwithgrocerystoreandrestaurant;fresh foods, non-perishable items and a health and beauty department. On-site pharmacy. Extensive prepared foods area serving breakfast, lunch and dinner. In-house coffee bar and world-class wine and spirits department. 315 North 9th St. (9-minute walk from Hyatt)PaneraBread:Open6am-7pm.Bakery/cafechainservingbreakfast, soups, sandwiches, salads etc., Free WiFi. 116 N 6th St. (4-minute walk from the Hyatt) North 6 Cafe: Open 7 am-3 pm. 701 Market St, Suite 50, breakfast and lunch, and full coffee and espresso bar (8 min walk from Hyatt)Java Plus Cafe: Open 7 am-3 pm. Breakfast, coffee, salads, sandwiches. 211 N Broadway, Suite 150 inside Met Square Building. (4-minute walk from Hyatt) Pharoah’s Donuts: Open 6 am-3 pm. 200 N 7th St. (5-minute walk from Hyatt)Starbucks (inside the Hyatt too): Open 6:30 am – 6 pm. 521 Olive St, Millennium Center (4-minute walk from the Hyatt)Rooster:Open8am–3pm;RoosterisaEuropeanstyle,urban cafe specializing in Crepes, Sandwiches, and Brunch items along with a unique selection of Coffee, Craft Beer and libations. 1104 Locust St. (13 min walk from the Hyatt)Chili Mac’s Diner: Open 5:30 am – 2 pm. Serving early breakfast through lunch, weekdays. 510 Pine St. (3-minute walk from Hyatt)

Hyatt Business Services: Shipping, Printing, PhotocopyAt the FedEx Office and Printer Center at Hyatt Regency St. Louis at The Arch, you’ll find everything you need, including computers with high-speed Internet access, on-demand printer, copier and fax, plus the service and support you need. Take advantage of all ourcapabilities:Largeformatcolorprinting;Signsandbanners;Pre-conventionprintingandfileassistance;Packagereceivingservices-outboundandinboundpackagehandlingfeesapply;24-houraccesstocomputerrental,copying,printingandfaxing;Office supplies.Please Note: Computer, copiers, printers and fax machines are not complimentary, but are accessible using a credit card.Hours & Contact Information: Monday-Friday | 8 a.m.- 6 p.m. Saturday | 9 a.m.- 3 p.m. Sunday | closed. Phone: 314 588 2464

Parking at the Hyatt: Limited parking is available. Self-Parking(US$29/day+tax);ValetParking(US$39/day+tax).Mansion House Garage: Less expensive than Hyatt, and located directlybehinditat330N.4thSt.Rates:7daysaweek.$14/day.PleaseEnteratMansionHouseApartments.Noin/outprivileges,limited oversized parking. Rates subject to change during special events and cannot be billed to guestroom.

Hyatt General Information910spaciousguestrooms;ViewsofSt.LouisGatewayArch,MississippiRiver&downtownSt.Louis;RegencyClubwithexclusiveclubloungeprivileges(foranadditionalcost);Complimentary Wi-Fi Internet AccessBrewhouseHistoricalSportsBar;Starbucks;REDKitchen&Bar;Ruth’sChrisSteakHouse;RoomService24-hrHyattStayFit™GymwithLifeFitnessequipment;Walking&jogging paths nearbyFedEx Office Print and Ship Center with fax, copying, computer rental, printing, and shipping services – Located on the 2nd floorGiftShopinLobby;On-siteEnterpriseRent-A-Car;HyattFastBoard™airlinecheck-in;Dogfriendly($100feeperstayupto7nights)

Childcare

Childcare services are not directly offered by ICAR. A local company is TLC for Kids. If you are interested, you would contact them directly. Contact information: Phone number: +1-314-725-5660. Office Hours (US CST): Mon-Fri (8:00 a.m. - 5:30 p.m.). Saturdays (9 a.m. to noon). An answering machine is checked regularly when the office is closed for last minute needs. Website: https://www.tlcforkids.com/hotel.php. Hotel Information to provide to the service: Hyatt Regency St. Louis at the Arch. Address: 315 Chestnut St. St. Louis, MO, 63102. Hotel phone: 1-314-655-1234

Emergency Telephone NumberEmergency – fire, police, and ambulance: 911

35

Page 38: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource

Poster Abstract Numbers Poster Abstract Numbers

#57

#307 #325

#58 #99 #100 #139 #140 #180 #181 #224 #225 #265 #266

#38 #79 #80 #119 #120 #159 #160 #201 #202 #244 #245 #287

#306 #288

Poster Abstract Numbers Poster Abstract Numbers

8’ 8’ 8’ 8’

8

11’

10’

1

92

103

114

125

136

147

Exhibit Booths

EXIT EXIT EXIT

EXIT EXIT EXIT

8’ 8’ 8’

8’

Exhibit Booths

EXHIBITORS 1. PhytoAB

2. RIKEN

3. ABRC & NASC/ European Stock Centre

4. TAIR

5. Plant Molecular Biology - Yale University

6. ASPB

7. BioChambers Inc.

8. Berthold Technologies

9. Agrisera

10. Conviron

11. LemnaTec

12. PhytoTechnology Laboratories

13. Monsanto

14. Hybrigenics

36

ICAR 2017 EXHIBIT HALL LAYOUT - Grand Ballroom

Page 39: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource
Page 40: ARABIDOPSIS RESEARCHicar2020.arabidopsisresearch.org/uploads/2/7/8/9/... · PhytoTechnology Laboratories Plant Molecular Biology - Yale University RIKEN- Center for Sustainable Resource