27 Prokaryotes Abbreviated 20120130

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    Bacteria on the point of a pin

    Chapter 27:Bacteria and Archaea

    1/30, 31/2012

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    26.21. The three domains of life. Branch lengths areproportional to the amount of genetic change in each lineage.Lineages with multi-cellular organisms shown in red

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    Harmful Haemophilus influenza, the bacteria that causes pneumonia

    (shown on human nose cells)

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    27.21. Lyme disease, a bacterial disease transmitted by ticks.([)

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    Bacillus anthracis. Gram stain. The cells have characteristic squared ends.The endospores are ellipsoidal shaped and located centrally in thesporangium. The spores are highly refractile to light and resistant to staining.

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    Without prokaryotesecosystems wouldcollapse!

    54.11

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    55.4 An overview of energy and nutrientdynamics in an ecosystem.

    Decomposition connects all

    trophic levels in an ecosystem

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    If all the bacteria on Earth suddenlydisappeared, which of the following would

    be the most likely direct result?

    A. Human populations would thrive in the absenceof disease.

    B. The Earth's total photosynthesis woulddecline markedly.

    C. The number of organisms on Earth woulddecrease by 10 to 20 percent.

    D. There would be little change in the Earth'secosystems.

    E. Recycling of nutrients would becatastrophically reduced.

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    27.16.

    A simplified

    phylogeny of

    prokaryotes.

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    Table 27.2.

    A comparison of the three

    domains of life

    Antibiotic target

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    27.17 Some Archaea: Thermo-acidophile (heat-acid loving) prokaryotes

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    Some Archaea: Hot springs, home of thermophiles ()

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    Methanogens () in Peat

    and the gut of cows

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    Some Archaea:

    Extreme halophiles

    ()

    Halobacterium:

    32%

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    Common Features of the Domain Bacteria

    May be classified according to their shape (just like Archaea)

    Many are motile using flagella

    No membrane-enclosed organelles (prokaryotic!)

    Peculiar cell wall containing peptidoglycan (a combination ofsugars and polypeptides)

    Smaller and simpler genome (than eukaryotes)

    A sexual or sexual reproduction

    Diversity of nutritional modes

    Often live in close association (symbiosis) with eukaryotes

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    27.2 The most common shapes of prokaryotes

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    Common Features of the DomainBacteria

    May be classified according to their shape

    Many are motile using flagella

    No membrane-enclosed organelles (prokaryotic!)

    Peculiar cell wall containing peptidoglycan (acombination of sugars and polypeptides)

    Smaller and simpler genome (than eukaryotes)

    A sexual or sexual reproduction Diversity of nutritional modes

    Often live in close association (symbiosis) witheukaryotes

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    27.6. Prokaryotic flagellum with the basal apparatus as a motor.

    Taxis/chemotaxis

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    Common Features of the Domain Bacteria

    May be classified according to their shape

    Many are motile using flagella

    No membrane-enclosed organelles (prokaryotic!)

    Peculiar cell wall containing peptidoglycan (acombination of sugars and polypeptides)

    Smaller and simpler genome (than eukaryotes)

    A sexual or sexual reproduction Diversity of nutritional modes

    Often live in close association (symbiosis) witheukaryotes

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    27.7 Specialized membranes of prokaryotes

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    Common Features of the Domain Bacteria

    May be classified according to their shape

    Many are motile using flagella

    No membrane-enclosed organelles (prokaryotic!)

    Peculiar cell wall containing peptidoglycan (acombination of sugars and polypeptides)

    Smaller and simpler genome (than eukaryotes)

    A sexual or sexual reproduction Diversity of nutritional modes

    Often live in close association (symbiosis) witheukaryotes

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    Figure 27.3 Gram-positive and gram-negative bacteria

    Gram staining: Apply crystal violet dye to bacterial smear, treat with

    iodine, rinse with alcohol and counterstain with safranin.

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    Gram-positive and gram-negative bacteria

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    Staphylococcus aureusStreptococcus pneumoniae

    Actinomycete

    Gram Positive

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    Escherichia coliNeisseria gonorrhoeae

    Yersinia pestis

    Gram Negative

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    27.4. Capsule

    The cell wall of may prokaryotes

    is covered with a sticky layer ofpolysaccharides or proteins.

    27.5. Fimbriae

    Hair-like protein appendages

    that allow a prokaryote to

    attach itself to their substrate

    or to each other.

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    Common Features of the Domain Bacteria

    May be classified according to their shape

    Many are motile using flagella

    No membrane-enclosed organelles (prokaryotic!)

    Peculiar cell wall containing peptidoglycan (acombination of sugars and polypeptides)

    Smaller and simpler genome (than eukaryotes)

    A sexual or sexual reproduction Diversity of nutritional modes

    Often live in close association (symbiosis) witheukaryotes

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    27.8. A prokaryotic chromosome and plasmids.

    A single ring ofDNA surrounding a ruptured E. colicell.

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    Common Features of the Domain Bacteria

    May be classified according to their shape

    Many are motile using flagella

    No membrane-enclosed organelles (prokaryotic!)

    Peculiar cell wall containing peptidoglycan (acombination of sugars and polypeptides)

    Smaller and simpler genome (than eukaryotes)

    A sexual or sexual reproduction Diversity of nutritional modes

    Often live in close association (symbiosis) witheukaryotes

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    Asexualreproduction:

    Fission(see also Fig 12.11)

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    Genetic recombination in prokaryotes

    No meiosis and fertilization, but

    Transformation:

    Uptake and incorporation of foreign DNA from the

    environment

    Conjugation:

    Direct transfer of genes from one prokaryote to

    another

    Transduction:

    Transfer of genes between prokaryotes by viruses

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    27.12. Prokaryotic conjugation.

    Donor cell transfersDNA to recipient.

    j Flagella, fimbriae, pilus

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    27.13. Conjugation: Direct transfer of genes from one prokaryote to another

    (have only been studied in Bacteria)

    The F factor is responsible for producing the mating bridge. It can either

    exist as a plasmid (a small circularDNA molecule with accessory genes)

    or as a segment ofDNA within the bacterial chromosome.

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    27.11. Transduction:

    Transfer of genes between

    prokaryotes by viruses.

    Phages may carry pieces of

    bacterial chromosome from

    one bacterium (donor) to a

    recipient bacterium.

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    Endospores

    27.9. Bacillus anthracis endospore (TEM)

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    Common Features of the Domain Bacteria

    May be classified according to their shape

    Many are motile using flagella

    No membrane-enclosed organelles (prokaryotic!)

    Peculiar cell wall containing peptidoglycan (acombination of sugars and polypeptides)

    Smaller and simpler genome (than eukaryotes)

    A sexual or sexual reproduction Diversity of nutritional modes Taxis/chemotaxis

    Often live in close association (symbiosis) witheukaryotes

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    Prokaryotes can evolve rapidly because of theirshort generation times

    Cooper and Lenski,Michigan State University E coli, 12 populations, 20,000 generations (8 years) of evolution

    Fig. 27.10 Can prokaryotes evolve rapidly in response to environmental change?

    CONCLUSION

    Asexual populations ofE. colicontinued to accumulate beneficial mutations for 20,000

    generations, allowing rapid evolution of improved performance in theirnew environment.

    Low-glucose

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    Table 27.1 MajorNutritionalModes

    - H2S,S-, Fe-comp.,NH3

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    Figure 27.14. One of the most independent organisms on earth:

    Cyanobacteria (in this case Anabaena) or blue-green algae

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    Common Features of the Domain Bacteria

    May be classified according to their shape

    Many are motile using flagella

    No membrane-enclosed organelles (prokaryotic!)

    Peculiar cell wall containing peptidoglycan (acombination of sugars and polypeptides)

    Smaller and simpler genome (than eukaryotes)

    A sexual or sexual reproduction Diversity of nutritional modes

    Often live in close association (symbiosis) witheukaryotes

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    Symbiotic relationships

    Mutualism bothsymbiotic organismsbenefit

    Commensalism onebenefits, the otheris neutral

    Parasitism onebenefits at theexpense of the other

    27.20. Bacterial headlights. Glowing oval below the

    eye of the flashlight fish contains bioluminescent

    bacteria that receive nutrients from the fish. The fishuses the light to attract prey and signal potential mates

    SEM ofEscherichia coli, very common in the lower

    intestine of warm-blooded animals where it produces a

    vitamin and protect against pathogenic bacteria.

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    37.9. The role of bacteria in the nitrogen cycle

    Nitrogen fixing bacteria in root nodules

    (mutualism) and in cyanobacteria (heterocysts)

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    Putting prokaryotes to work in sewage treatment facilities

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    Figure 27.17 (a) Bioremediation of an oil spill, (b) bacteria

    synthesizing biodegradable plastics, and (c) bacteria used to

    produce ethanol from plants.

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    AlexanderFleming18811955

    1928(Penicillin)1938

    :

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    1945

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    , , , ,

    , :

    14%53.7%

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    In which of the following ways are prokaryotes

    more successful on Earth than humans?

    A. Prokaryotes often parasitize humans in many ways.

    B. Prokaryotes are much more numerous than

    humans.

    C. Prokaryotes occupy more diverse habitats than

    humans.

    D. Prokaryotes have survived on Earth for billions ofyears longer than humans have.

    E. All of the above are true.