1
PowerPoint Template ©2009 Texas Christian University, Center for Instructional Services. For Educational Use Only. Content is the property of the presenter and their resources. Abstract In chemistry, cyclic compounds of twelve or more members including any hetero-atom are considered macrocycles. Many bioactive natural products containing macrocycles have been isolated and synthesized. Some of the macrocyclic antibiotics that have been found or synthesized are vancomycin, daptomycin, polymyxin, bacitracin A and azithromycin. Construction of macrocycles is usually considered a challenging step in the synthesis. Here, we represent synthesis of different sized macrocycles by connecting two or more cyanuric chloride molecules substituted with various length amino acids to give rings of different sizes. So far, we have been able to synthesize macrocycles of 22, 24, 26, and 28 members by forming of dimers. Our goal to influence that the length of carbon chains has on ring formation as well as the solubility of these molecules. Results and Characterization Future Plans The future plan for this research is to expand the library of homodimer macrocycles to include different sizes and eventually heterodimers. The interior of the ring could recognize guest molecules or metal ions opening the possibility of using these macrocycles to carry medicines. Solubility of these macrocycles has been challenge so far. To enhance the solubility, morpholine could be replaced with hydrophilic groups such as 4-aminopiperdine. After a sufficient amount of unique macrocycles are acquired, the molecules will be put through a high throughput screen to see if they can interfere with protein-protein interactions, thus acting as drugs in their own right. Some of the planned macrocycles are shown below. Background The formation of macrocycles by ring-closure is called macrocyclization. Ring closing reactions do not favor the formation of large rings. Instead, polymers tend to form. Macrocycles have been a topic of research for decades due to their biological activity, topology, and as tests of the limits of synthetic methodology. Some classes of macrocycles are relatively easy to synthesize, while others present challenges. Antibiotics vancomycin, fidaxomicin, nisin, azithromycin, and clarithromycin contain different sized macrocycles. Synthetic Schemes Exploring Cyanuric Chloride Chemistry to Synthesize Macrocycles of Different Sizes Vishal Sharma, Alexander Menke, Eric Simanek Department of Chemistry, Texas Christian University, Fort Worth, TX, 76129, USA Acknowledgements TCU SERC Grant TCU Department of Chemistry and Biochemistry Clarithromycin Vancomycin X = H R= methyl, ethyl Table 1: List of macrocycles synthesized. (X = H) Figure 1: 1 H-NMR of macrocycle (M-2) Figure 2: 1 H-COSY of macrocycle (M-2) Figure 3: X-Ray crystal structure of M-2 Figure 4: Mass spectrum of M-2. Expected; m/z 612.31. Observed; 613.37 vrs_V_51 # 1 RT: 0.01 AV: 1 NL: 7.84E6 T: + c ESI Full ms [250.00-2000.00] 400 600 800 1000 1200 1400 1600 1800 2000 m/z 0 10 20 30 40 50 60 70 80 90 100 613.37 635.51 651.37 307.30 865.24 765.32 326.24 903.37 1898.83 1476.74 1288.23 1622.26 513.20 1147.09 Macrocycles n m Ring Size 1 1 1 22 2 1 2 24 3 1 3 26 4 2 1 24 5 2 2 26 6 2 3 28 X = CH 3 R 1 = isopropyl R 2 = 4-aminopiperdine References: Hamilton-Miller, J. M. Bacteriol. Rev. 1973, 37, 166-196

Vishal Sharma, Alexander Menke, Eric Simanek...Vishal Sharma, Alexander Menke, Eric Simanek Department of Chemistry, Texas Christian University, Fort Worth, TX, 76129, USA Acknowledgements

  • Upload
    others

  • View
    10

  • Download
    0

Embed Size (px)

Citation preview

Page 1: Vishal Sharma, Alexander Menke, Eric Simanek...Vishal Sharma, Alexander Menke, Eric Simanek Department of Chemistry, Texas Christian University, Fort Worth, TX, 76129, USA Acknowledgements

PowerPoint Template ©2009 Texas Christian University, Center for Instructional Services. For Educational Use Only. Content is the property of the presenter and their resources.

AbstractIn chemistry, cyclic compounds of twelve or

more members including any hetero-atom are

considered macrocycles. Many bioactive natural

products containing macrocycles have been

isolated and synthesized. Some of the macrocyclic

antibiotics that have been found or synthesized are

vancomycin, daptomycin, polymyxin, bacitracin A

and azithromycin. Construction of macrocycles is

usually considered a challenging step in the

synthesis. Here, we represent synthesis of different

sized macrocycles by connecting two or more

cyanuric chloride molecules substituted with

various length amino acids to give rings of

different sizes. So far, we have been able to

synthesize macrocycles of 22, 24, 26, and 28

members by forming of dimers. Our goal to

influence that the length of carbon chains has on

ring formation as well as the solubility of these

molecules.

Results and Characterization

Future PlansThe future plan for this research is to expand

the library of homodimer macrocycles to include

different sizes and eventually heterodimers. The

interior of the ring could recognize guest molecules

or metal ions opening the possibility of using these

macrocycles to carry medicines. Solubility of these

macrocycles has been challenge so far. To enhance

the solubility, morpholine could be replaced with

hydrophilic groups such as 4-aminopiperdine. After

a sufficient amount of unique macrocycles are

acquired, the molecules will be put through a high

throughput screen to see if they can interfere with

protein-protein interactions, thus acting as drugs in

their own right.

Some of the planned macrocycles are shown

below.

BackgroundThe formation of macrocycles by ring-closure

is called macrocyclization. Ring closing reactions

do not favor the formation of large rings. Instead,

polymers tend to form. Macrocycles have been a

topic of research for decades due to their biological

activity, topology, and as tests of the limits of

synthetic methodology. Some classes of

macrocycles are relatively easy to synthesize, while

others present challenges. Antibiotics vancomycin,

fidaxomicin, nisin, azithromycin, and

clarithromycin contain different sized macrocycles.

Synthetic Schemes

Exploring Cyanuric Chloride Chemistry to Synthesize Macrocycles of Different Sizes

Vishal Sharma, Alexander Menke, Eric SimanekDepartment of Chemistry, Texas Christian University, Fort Worth, TX, 76129, USA

Acknowledgements• TCU SERC Grant

• TCU Department of Chemistry and Biochemistry

Clarithromycin Vancomycin

X = H R= methyl, ethyl

Table 1: List of macrocycles synthesized. (X = H)

Figure 1: 1H-NMR of macrocycle (M-2)

Figure 2: 1H-COSY of macrocycle

(M-2)

Figure 3: X-Ray crystal structure

of M-2

Figure 4: Mass spectrum of M-2.

Expected; m/z 612.31.

Observed; 613.37

vrs_V_51 #1 RT: 0.01 AV: 1 NL: 7.84E6

T: + c ESI Full ms [250.00-2000.00]

400 600 800 1000 1200 1400 1600 1800 2000

m/z

0

10

20

30

40

50

60

70

80

90

100

Relat

ive A

bund

ance

613.37

635.51

651.37

307.30 865.24

765.32326.24 903.37 1898.831476.741288.23 1622.26513.20 1147.09

Macrocycles n m Ring Size

1 1 1 22

2 1 2 24

3 1 3 26

4 2 1 24

5 2 2 26

6 2 3 28

X = CH3

R1 = isopropyl

R2 = 4-aminopiperdine

References:• Hamilton-Miller, J. M. Bacteriol. Rev. 1973, 37,

166-196