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Viruses, Viroids, and Prions

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Are Viruses Living or Are Viruses Living or Non-living?Non-living?

Viruses are both and neitherThey have some properties

of life but not othersFor example, viruses can be

killed, even crystallized like table saltHowever, they can’t

maintain a constant internal state (homeostasis).

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What are What are Viruses?Viruses?

A virus is a non-cellular particle made up of genetic material and protein that can invade living cells.

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Viral Viral HistoryHistory

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Discovery of VirusesDiscovery of VirusesBeijerinck (1897)

coined the Latin name “virus” meaning poison

He studied filtered plant juices & found they caused healthy plants to become sick

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Tobacco Mosaic VirusTobacco Mosaic VirusWendell Stanley

(1935) crystallized sap from sick tobacco plants

He discovered viruses were made of nucleic acid and protein

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SmallpoxSmallpoxEdward Jenner

(1796) developed a smallpox vaccine using milder cowpox viruses

Deadly viruses are said to be virulent

Smallpox has been eradicated in the world today

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Viewing VirusesViewing VirusesViruses are Viruses are

smaller than the smaller than the smallest cellsmallest cell

Measured in Measured in nanometersnanometers

Viruses couldn’t Viruses couldn’t be seen until the be seen until the electron microscopeelectron microscope was invented in the was invented in the 2020thth century century

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Size of VirusesSize of Viruses

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Viral Viral StructureStructure

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CharacteristicsCharacteristicsNon living structuresNoncellularContain a protein coat called

the capsidHave a nucleic acid core

containing DNA or RNACapable of reproducing only

when inside a HOST cellcopyright cmassengale

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CharacteristicsCharacteristicsSome viruses are

enclosed in an protective envelopeSome viruses may

have spikes to help attach to the host cellMost viruses infect

only SPECIFIC host cells

CAPSID

ENVELOPE

DNA

SPIKES

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CharacteristicsCharacteristicsViral capsids

(coats) are made of individual protein subunits

Individual subunits are called capsomeres

CAPSOMERES

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CharacteristicsCharacteristicsOutside of host cells,

viruses are inactiveLack ribosomes and

enzymes needed for metabolism

Use the raw materials and enzymes of the host cell to be able to reproduce

EBOLA VIRUS

HIV VIRUS

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CharacteristicsCharacteristicsSome viruses cause

diseaseSmallpox, measles,

mononucleosis, influenza, colds, warts, AIDS, Ebola

Some viruses may cause some cancers like leukemia

Virus-free cells are rare

MEASLES

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Viral ShapesViral ShapesViruses come in a variety

of shapesSome may be helical shape

like the Ebola virusSome may be polyhedral

shapes like the influenza virus

Others have more complex shapes like bacteriophages

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Helical VirusesHelical Viruses

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Polyhedral VirusesPolyhedral Viruses

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Complex VirusesComplex Viruses

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Taxonomy of Taxonomy of VirusesViruses

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Viral TaxonomyViral TaxonomyFamily names end in -viridaeGenus names end in -virus Viral species: A group of viruses

sharing the same genetic information and ecological niche (host). Common names are used for

speciesSubspecies are designated by a

number

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Viral Taxonomy Viral Taxonomy ExamplesExamples

HerpesviridaeHerpesvirusHuman herpes virus 1, HHV 2, HHV 3

RetroviridaeLentivirusHuman Immunodeficiency Virus 1, HIV 2

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Herpes VirusHerpes Virus

SIMPLEX I and II

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AdenovirusAdenovirus

COMMON COLDcopyright cmassengale

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Influenza VirusInfluenza Virus

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Chickenpox VirusChickenpox Virus

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Papillomavirus – Papillomavirus – Warts!Warts!

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RNA or DNA VirusDo or do NOT have an

envelopeCapsid shapeHOST they infect

Used for Virus Used for Virus IdentificationIdentification

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Bacteriophages

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PhagesPhagesViruses that

attack bacteria are called bacteriophage or just phage

T-phages are a specific class of bacteriophages with icosahedral heads, double-stranded DNA, and tails

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T-phagesT-phagesThe most commonly

studied T-phages are T4 and T7

They infect E. coli , an intestinal bacteria

Six small spikes at the base of a contractile tail are used to attach to the host cell

Inject viral DNA into cell

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Escherichia Coli Bacterium

T - EVEN PHAGES ATTACK THIS BACTERIUMcopyright cmassengale

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T-Even Bacteriophages

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Diagram of T-4 Diagram of T-4 BacteriophageBacteriophage

Head with 20 triangular surfaces

Capsid contains DNA

Head & tail fibers made of protein

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RetrovirusesRetroviruses

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Characteristics of Characteristics of RetrovirusesRetroviruses

Contain RNA, not DNAFamily RetroviridaeContain enzyme called

Reverse TranscriptaseWhen a retrovirus infects a

cell, it injects its RNA and reverse transcriptase enzyme into the cytoplasm of that cell

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ENZYME

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RetrovirusesRetrovirusesThe enzyme

reverse transcriptase (or RTase), which causes synthesis of a complementary DNA molecule (cDNA) using virus RNA as a template RTase

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RetrovirusesRetrovirusesHIV, the AIDS

virus, is a retrovirus

Feline Leukemia Virus is also a retrovirus

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Viroids & PrionsViroids & Prions

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ViroidsViroidsSmall, circular

RNA molecules without a protein coat

Infect plantsPotato famine

in IrelandResemble

introns cut out of eukaryotic

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PrionsPrionsPrions are “infectious

proteins” They are normal

body proteins that get converted into an alternate configuration by contact with other prion proteins

They have no DNA or RNA

The main protein involved in human and mammalian prion diseases is called “PrP”

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Prion Prion DiseasesDiseases

Prions form Prions form insoluble insoluble deposits in the braindeposits in the brain

Causes neurons to Causes neurons to rapidly degeneration.rapidly degeneration.

Mad cow diseaseMad cow disease (bovine spongiform (bovine spongiform encephalitis: BSE) is an encephalitis: BSE) is an exampleexample

People in New People in New Guinea used to suffer Guinea used to suffer from from kurukuru, which they , which they got from eating the got from eating the brains of their enemiesbrains of their enemies

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Viral Viral ReplicationReplication

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Viral AttackViral AttackViruses are very specific as to

which species they attackHOST specificHumans rarely share viral

diseases with other animalsEukaryotic viruses usually have

protective envelopes made from the host cell membrane

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5 Steps of Lytic 5 Steps of Lytic CycleCycle

1. Attachment to the cell2. Penetration (injection) of

viral DNA or RNA3. Replication (Biosynthesis) of

new viral proteins and nucleic acids4. Assembly (Maturation) of the

new viruses 5. Release of the new viruses

into the environment (cell lyses)copyright cmassengale

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BacteriophageBacteriophage ReplicationReplication

Bacteriophage inject their nucleic acid

They lyse (break open) the bacterial cell when replication is finished

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Attachment Phage attaches by tail fibers to

host cellPenetration Phage lysozyme opens cell wall,

tail sheath contracts to force tail core and DNA into cellBiosynthesis Production of phage DNA

and proteinsMaturation Assembly of phage particlesRelease Phage lysozyme breaks cell wall

Lytic Cycle ReviewLytic Cycle Review

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Attachment:Phage attaches to host cell.

Penetration:Phage pnetrates host cell and injects its DNA.

Merozoites released into bloodsteam from liver may infect new red blood cells

1

2

3

Bacterial cell wall

Bacterial chromosome

Capsid

DNA

Capsid

SheathTail fiberBase platePinCell wall

Tail

Plasma membrane

Sheath contracted

Tail core

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4 Maturation:Viral components are assembled into virions.

Tail

5 Release:Host cell lyses and new virions are released.

DNA

Capsid

Tail fibers

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One-step Growth One-step Growth CurveCurve

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Viral LatencyViral LatencySome viruses have the ability to

become dormant inside the cellCalled latent virusesThey may remain inactive for

long periods of time (years)Later, they activate to produce

new viruses in response to some external signal

HIV and Herpes viruses are examples

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Lysogenic CycleLysogenic CyclePhage DNA

injected into host cell

Viral DNA joins host DNA forming a prophage

When an activation signal occurs, the phage DNA starts replicating

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Lysogenic CycleLysogenic CycleViral DNA (part of

prophage) may stay inactive in host cell for long periods of time

Replicated during each binary fission

Over time, many cells form containing the prophages

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Viral LatencyViral LatencyOnce a prophage cell is activated, host cell enters the lytic cellNew viruses form a & the cell lyses (bursts)Virus said to be virulent (deadly)

INACTIVE STAGEACTIVESTAGE

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Virulent VirusesVirulent Viruses

HOST CELL

LYSES & DIES

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The Lysogenic CycleThe Lysogenic Cycle

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Latency in Latency in EukaryotesEukaryotesSome eukaryotic

viruses remain dormant for many years in the nervous system tissues

Chickenpox (caused by the virus Varicella zoster) is a childhood infection

It can reappear later in life as shingles, a painful itching rash limited to small areas of the body

SHINGLES

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Latency in EukaryotesLatency in EukaryotesHerpes viruses also

become latent in the nervous system

A herpes infection lasts for a person’s lifetime

Genital herpes (Herpes Simplex 2)

Cold sores or fever blisters (Herpes Simplex1)

SKIN TO SKIN CONTACT

PASSED AT BIRTH TO BABY

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VirulenceVirulence

VIRUS DESTROYING HOST CELLcopyright cmassengale

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Lytic and Lysogenic Lytic and Lysogenic CyclesCycles

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Treatment for Treatment for Viral DiseaseViral Disease

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VaccinesVaccines

An attenuated virus is a weakened, less vigorous virus“Attenuate" refers to procedures that

weaken an agent of disease (heating)A vaccine against a viral disease can be

made from an attenuated, less virulent strain of the virusAttenuated virus is capable of

stimulating an immune response and creating immunity, but not causing illness

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Other Viral TreatmentsOther Viral TreatmentsInterferon are

naturally occurring proteins made by cells to fight viruses

Genetic altering of viruses (attenuated viruses)

Antiviral drugs (AZT)Protease inhibitors –

prevent capsid formation

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