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Solving Spectroscopy Problems: Putting it All Together Once you’ve analyzed the mass spectrometry, infrared spectrometry, 1 H‐NMR, and 13 C‐ NMR data, there is no one way to put them together. It’s all about trial and error, but here are a few helpful tips and tricks to help you get on the right track. First, here’s an overview of the information you should have obtained based on your analyses of the data from the 4 methods of spectrometry. Mass Spectrometry‐ molecular formula, DBE Infrared Spectrometry‐ present functional groups 1 H‐NMR‐ backbone structure (C‐H) 13 C‐NMR‐ hydrogens attached to the carbons, confirms functional groups found in IR and implications determined by H‐NMR Key things to remember as you proceed with the puzzle: 1) Keep track of the number atoms in your molecule. Make sure the sum of the atoms in your 1 H‐NMR implications + functional groups from IR spectrum matches the molecular formula obtained from the mass spectrum. 2) Keep track of the DBE count, especially when doing IR analysis. 3) Check that your implications and your final molecule match 1 H‐NMR and 13 C‐ NMR chemical shifts. 4) Check that your final molecule matches the number of signals, splitting pattern, and number of hydrogen atoms as the 1 H‐NMR and 13 C‐NMR data The information from the mass spectrum is pretty straight forward. Use it to keep track of the number of each atom as you proceed with the IR analysis and the 1 H‐NMR spectrum (number of carbons and hydrogens). Here’s a handy table that will help you out with determining the functional group associated with the given carbonyl group: Functional Group IR 1 H‐NMR 13 C‐NMR Aldehyde 2 C‐H peaks: ~2900 and ~2700 cm ‐1 C=O stretch 1740‐1720 cm ‐1 Aldehyde proton 9.5‐ 11 ppm C=O carbon doublet 180‐220 ppm Ketone C=O stretch 1750‐1705 cm ‐1 No characteristic 1 H chemical shift C=O carbon singlet 180‐220 ppm Ester C=O stretch 1750‐1735 cm ‐1 No characteristic 1 H chemical shift C=O carbon singlet 160‐180 ppm Carboxylic acid Broad O‐H stretch 3000‐ 2500 cm ‐1 C=O stretch 1725‐1700 cm ‐1 COOH proton 10‐13 ppm C=O carbon singlet 175‐185 ppm

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Page 1: Solving Spectroscopy Problems: Putting it All Togetherharding/ec_tutorials/tutorial56.pdf · Solving Spectroscopy Problems: Putting it ... O‐H stretch 3000 ... Chemistry 14C Thinkbook

SolvingSpectroscopyProblems:PuttingitAllTogether

Onceyou’veanalyzedthemassspectrometry,infraredspectrometry,1H‐NMR,and13C‐NMRdata,thereisnoonewaytoputthemtogether.It’sallabouttrialanderror,buthereareafewhelpfultipsandtrickstohelpyougetontherighttrack.First,here’sanoverviewoftheinformationyoushouldhaveobtainedbasedonyouranalysesofthedatafromthe4methodsofspectrometry.MassSpectrometry‐molecularformula,DBEInfraredSpectrometry‐presentfunctionalgroups1H‐NMR‐backbonestructure(C‐H)13C‐NMR‐hydrogensattachedtothecarbons,confirmsfunctionalgroupsfoundinIRandimplicationsdeterminedbyH‐NMRKeythingstorememberasyouproceedwiththepuzzle:

1) Keeptrackofthenumberatomsinyourmolecule.Makesurethesumoftheatomsinyour1H‐NMRimplications+functionalgroupsfromIRspectrummatchesthemolecularformulaobtainedfromthemassspectrum.

2) KeeptrackoftheDBEcount,especiallywhendoingIRanalysis.3) Checkthatyourimplicationsandyourfinalmoleculematch1H‐NMRand13C‐

NMRchemicalshifts.4) Checkthatyourfinalmoleculematchesthenumberofsignals,splittingpattern,

andnumberofhydrogenatomsasthe1H‐NMRand13C‐NMRdataTheinformationfromthemassspectrumisprettystraightforward.UseittokeeptrackofthenumberofeachatomasyouproceedwiththeIRanalysisandthe1H‐NMRspectrum(numberofcarbonsandhydrogens).Here’sahandytablethatwillhelpyououtwithdeterminingthefunctionalgroupassociatedwiththegivencarbonylgroup:

FunctionalGroup IR 1H‐NMR 13C‐NMRAldehyde 2C‐Hpeaks:~2900and

~2700cm‐1C=Ostretch1740‐1720cm‐1

Aldehydeproton9.5‐11ppm

C=Ocarbondoublet180‐220ppm

Ketone C=Ostretch1750‐1705cm‐1

Nocharacteristic1Hchemicalshift

C=Ocarbonsinglet180‐220ppm

Ester C=Ostretch1750‐1735cm‐1

Nocharacteristic1Hchemicalshift

C=Ocarbonsinglet160‐180ppm

Carboxylicacid BroadO‐Hstretch3000‐2500cm‐1

C=Ostretch1725‐1700cm‐1

COOHproton10‐13ppm

C=Ocarbonsinglet175‐185ppm

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Amide N‐Hstretch3500‐3300cm‐1(2peaksif1°,1peakif2°,noneif3°)C=Ostretch1690‐1650cm‐1

N‐Hproton5‐9ppm C=Ocarbonsinglet160‐180ppm

Dr.Hardinger’sChemistry14CThinkbook,NinthEditionFirst,listoutallimplications,functionalgroups,andremainingatomsthatyouhavefoundfromtheIR,1H‐NMR,and13C‐NMRdata.Consolidateasmany1H‐NMRimplicationsfromdifferentsignalsaspossible(willbediscussedshortly).Oncethat’ssettled,agoodstartingplaceistodrawoutthefunctionalgroupsfoundintheIRspectrumsuchas: Then,usetrialanderrortoattachtheremainingpieces(1H‐NMRandIRfunctionalgroups).For1H‐NMR,herearesomehintsandpatternsthatoccurfrequently(butnotalways):

Page 3: Solving Spectroscopy Problems: Putting it All Togetherharding/ec_tutorials/tutorial56.pdf · Solving Spectroscopy Problems: Putting it ... O‐H stretch 3000 ... Chemistry 14C Thinkbook

Butfirst,here’satableofthemorecommonimplicationsandtheonesthataremostlikelytomakeuppartofthefinalmolecule(i.e.onethatshowupintheThinkbookandpracticeexams).Itdoesnotshowallpossibleimplications.………theseareoftenoverlooked,butkeeptheseimplicationsinmindwhenthereareoxygens(alcoholsmorespecifically)andnitrogensinthemolecularformulaandwhenalcohols,amines,carbonyls,carboxylicacids,andaldehydesarepresentittheIRspectrum……… theseatomsrepresentthecarbonswiththecorrectnumberofhydrogensindicatedbytheintegrationShift Signal Integration Numberof

HydrogensImplications

singlet 123469

123469

CH,OH,NH,C=O,CHO,COOHCH2,CHx2CH3CHx3CH2x2,CHx4CH3x2,CH2x3,CHx6CH3x3,CHx9

Doublet 123469

123469

CHCHCHCH2CHCH3

CHCH2,CHCH3x2CHCH3x3

Triplet 123469

123469

CH2CH,CHCHCHCH2CH2,,CHCH2CHCH2CH3,CHCH3CHCH2CH2x2,CHCH2CHx2CH2CH3x2,CHCH3CHx2CH2CH3x3,CHCH3CHx3

Quartet 123469

123469

CH3CH,CH2CHCHCH3CH2,,CH2CH2CHCH3CH3,CH2CH3CHCH3CH2x2,CH2CH2CHx2CH3CH3x2,CH2CH3CHx2CH3CH3x3,CH2CH3CHx3

Pentet 123469

123469

CH3CHCH,CH2CHCH2CH3CH2CH,,CH2CH2CH2

CH3CH3CH,CH2CH3CH2

CH3CH2CHx2,CH2CH2CH2x2CH3CH3CHx2,CH2CH3CH2x2CH3CH3CHx3,CH2CH3CH2x3

Sextet 12

12

CH3CHCH2,CH2CHCH2

CH3CH2CH2,CH2CH2CH3

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3469

3469

CH3CH3CH2,CH2CH3CH3

CH3CH2CH2x2CH3CH3CH2x2CH3CH3CH2x3

Septet 123469

123469

CH3CHCH3

CH3CH2CH3

CH3CH3CH3

CH3CH2CH3x2CH3CH3CH3x2CH3CH3CH3x3

Multiplet 5 5 C6H5monosubstitutedbenzenering 2

Doublets4 4 C6H4disubstitutedbenzenering

Multipletsand“doubletsofdoublets”areusuallybenzeneringsforourpurposes.ImplicationsoftheformCH3x2or3areoftenpresentinmoleculeswith2or3CH3groupsattachedtothesameatomorshowsymmetryinotherwaysacrossthemolecule. i.e.CH3x2: CH3x3:Oftentimesyoucancoupletogetherimplicationsforseveralsignalsiftheycoincidewitheachother. i.e.atripletCH2CH3andaquartetCH3CH2canbeputtogetherintoonesingle piece:CH2CH3Whenyouneedtoseparateimplicationsfordifferentsignalssothattheydon’tcouple,tryinsertingtheseatoms/moleculesinbetweenthem: O C=O N i.e.CH3CH2CH2CH2CH2 Gives:2triplets,2pentets,1sextet whereas CH3CH2OCH2CH2CH2 Gives:3triplets,1quartet,and1pentetNowlet’sputitalltogetherwithsomepracticeproblems!13C‐NMR,2D‐NMR,andMRIOWL#4.SuggestthestructureforamoleculeofformulaC10H14OwiththefollowingNMRdata.Formula:C10H14O DBE=10–(14/2)+(1/0)+1=4(probablybenzenering)

Page 5: Solving Spectroscopy Problems: Putting it All Togetherharding/ec_tutorials/tutorial56.pdf · Solving Spectroscopy Problems: Putting it ... O‐H stretch 3000 ... Chemistry 14C Thinkbook

1H‐NMR:7.12ppm(doubletofdoublets;integral=2),6.82ppm(doubletofdoublets;integral=2),3.74ppm(singlet;integral=3),2.84ppm(septet;integral=1),and1.21ppm(doublet;integral=6).13C‐NMR:157.9ppm(singlet),141.1ppm(singlet),127.3ppm(doublet),113.9ppm(doublet),55.2ppm(quartet),33.4ppm(doublet),and24.2ppm(quartet)AftercompletionoftheIRandNMRanalyses,youshouldhavethefollowingpieces: 1H‐NMR: C6H4disubstitutedbenzenering CH3singlet CH(CH3)2 CH3CHx2 13C‐NMR: 157.9ppmsinglet–benzeneringC 141.1ppmsinglet–benzeneringC 127.3ppm,113.9ppm–2CHonbenzenering 55.2ppmquartet–CH3(probablydirectlyattached tobenzenering) 33.4ppmdoublet–CH(probablydirectlyattachedto benzenering) 24.2ppmquartet–CH3KEEPTRACKofthenumberofatomsinyourmolecule! C6H4+CH(CH3)2+CH3=C10H14 What’sleft:O

1) startbydrawingthebenzenering:

2) Sincethebenzeneringisisubstiutedthereare2carbonsonitthatcanconnecttothe2remainingpiecesofthepuzzle.These2piecescanbearrangedin3possibleways:

Sincethereare413C‐NMRsignalsattachedtothebenzenering.Onlythepara isomergivesthisarrangementfitsourstructure.

3) Sincewestillhaveanoxygenleft,itcanattachtoeithertheCHortheCH3singlet.Lookatthe1H‐NMRchemicalshiftandyouwillseethattheCH3singlethasthehigherchemicalshift,soitisprobablyattachedtotheoxygen.So,attachtheCH(CH3)2ononepositiononthebenzeneringandtheCH3Oyoujustmadeontheotherposition.

CH(CH3)2 HereI’vematchedtheprotonandcarbonNMRimplicationsbyhighlightingthemwiththesamecolor.Youcanseethat13C‐NMRconfirmsthe1H‐NMRimplications

Page 6: Solving Spectroscopy Problems: Putting it All Togetherharding/ec_tutorials/tutorial56.pdf · Solving Spectroscopy Problems: Putting it ... O‐H stretch 3000 ... Chemistry 14C Thinkbook

Makesuretocheckyouhavealltherequiredatomsandcheckforthecorrect numberofNMRsignalsandthecorrectchemicalshifts. Andthereyouhaveit!Let’stryaharderone:13C‐NMR,2D‐NMR,andMRIPracticeProblem#16:Deducethestructurethatcorrespondstothespectraldata.MassSpectrum:m/z242(M:100%),m/z243(17.87%),andm/z132(0.50%) Solveforformula:C16H18O2

DBE=8IR:alcoholO‐H,aryl/vinylsp2C‐H,alkylsp

3C‐H,benzenering1H‐NMR:7.24‐7.14ppm(multiplet;integral=5),3.62ppm(triplet;integral=1),2.50ppm(singlet;integral=1)1.68ppm(pentet;integral=1),and1.51ppm(triplet;integral=1)13C‐NMR:142.3ppm(singlet),128.4ppm(doublet),128.3ppm(doublet),125.7ppm(doublet),78.5ppm(singlet),62.0ppm(triplet),39.5ppm(triplet),and27.2ppm(triplet)Pieces: 2xC6H5monosubstitutedbenzenering CH3CH2CHorCH2CH2CH2 CH2CH2

2xOH CH2CH2leftovers:O,C

1) Sincethe2benzeneringsareequivalent(samesignal),drawoutthebenzeneringsnexttoeachothersotheycansomehowbeequivalent.

2) Itseemsyoucan’tattachthemwiththeremainingpiecesinbetweenthem,

linkingthemtogetherastheCH2CH2CH2,C,andOcannotformasymmetricchainonitsown.TheleftoverCmustattachthetworings.

3) TheleftoverChas2benzeneringsattached,soithas2morebondstoform.OnecanbetheCH2CH2CH2chain.

(thisonefitsbetterwiththeotherimplications‐CH2CH2)

Putthese3togetherCH2CH2CH2

Page 7: Solving Spectroscopy Problems: Putting it All Togetherharding/ec_tutorials/tutorial56.pdf · Solving Spectroscopy Problems: Putting it ... O‐H stretch 3000 ... Chemistry 14C Thinkbook

4) TheothermustbeanOHasthatisallwehaveleft.

5) TheotherOHmustcapofftheendoftheCH2CH2CH2chaintocompletethemolecule.

Andsince“ThetwoendsofthisCH2CH2CH2piecearenotequivalent”the moleculemustbeconstructedthisway.(Dr.Hardinger’sChemistry14C Thinkbook,NinthEdition) Rememberagaintocheckyourwork‐molecularformula,IRfunctionalgroups, NMRsignals,integrals,andchemicalshifts.References:Dr.Hardinger’sChemistry14CThinkbook,NinthEdition(pgs.217,221‐222,229,233‐235)http://www.google.com/imgres?q=functional+groups+with+carbonyl+group&um=1&hl=en&client=safari&rls=en&biw=1139&bih=680&tbm=isch&tbnid=aOKDVE2NLZKKqM:&imgrefurl=http://chemcases.com/nutra/nutra1b.htm&docid=1MbiE9tMRQOpmM&imgurl=http://chemcases.com/nutra/images/fig1‐06.jpg&w=602&h=721&ei=VgbAT8GgLcWTiQKJuPWZCA&zoom=1http://www.google.com/imgres?q=para+meta+ortho+benzene&um=1&hl=en&client=safari&sa=N&rls=en&biw=1139&bih=680&tbm=isch&tbnid=KArztwsBDmPf3M:&imgrefurl=http://www.chemistry.ccsu.edu/glagovich/teaching/311/content/nomenclature/aromatic/aromatic.html&docid=gnnv_DZHQ3IZsM&imgurl=http://www.chemistry.ccsu.edu/glagovich/teaching/311/content/nomenclature/aromatic/images/sysnameb1.gif&w=575&h=181&ei=JHLAT6GjJuXdiAKXjfHyBw&zoom=1&iact=hc&vpx=294&vpy=193&dur=15&hovh=126&hovw=401&tx=136&ty=95&sig=114357793350899697903&page=1&tbnh=75&tbnw=238&start=0&ndsp=15&ved=1t:429,r:1,s:0,i:75http://www.google.com/imgres?q=benzene&um=1&hl=en&client=safari&rls=en&biw=1139&bih=680&tbm=isch&tbnid=ptp3zroofLsWhM:&imgrefurl=http://bond‐ashleyandlauren.blogspot.com/2011/05/alicylics‐aromatics.html&docid=_seNoTRwc7M1pM&imgurl=http://4.bp.blogspot.com/‐Y6KOQloTUtw/TdyYzb5AC‐I/AAAAAAAAAEw/oHGYdE‐xszc/s1600/71432.gif&w=444&h=500&ei=6XTAT4GVNabhiALm‐Mj8Bw&zoom=1&iact=hc&vpx=127&vpy=324&dur=402&hovh=233&hovw=208&tx=114&ty=166&sig=114357793350899697903&page=1&tbnh=141&tbnw=130&start=0&ndsp=18&ved=1t:429,r:6,s:0,i:137