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Protective Groups in SyntheticOrganic Chemistry
OO
OMeMe
OPMB
XX
OTBS
Lecture Notes
Key Texts
P. J. Kocienski, Protecting Groups (2nd Edition), 1994,Georg Thieme Verlag: Stuttgart, p. 260.
P. J. Kocienski, Protecting Groups (3rd Edition), 2004,Georg Thieme: Stuttgart, p. 679.
T. W. Greene, P. G. M. Wutz, Protective Groups in Organic Synthesis (3rd Edition), 1999,John Wiley and Sons: New York, p. 779.
Key Reviews
Selective Deprotections: T. D. Nelson, R. D. Crouch, Synthesis 1996, 1065.
Protective Groups:Background and General Considerations
"Protection is a principle, not an expedient" Benjamin Disraeli, British Prime Minister, 1845
"Like death and taxes, protecting groups have becomea consecrated obstruction which we cannot elude"
Peter Kocienski, Organic Chemist
Every protecting group adds at least one, if not two steps to a synthesisThey only detract from the overall efficiency and beauty of a route, but, without them,there are certainly transformations which we would not be able to do at all.
Remember:
Protective Groups:Temporary Protection
Temporary protection involves the ideal for protecting groups when they are required:the protection step, desired reaction, and deprotection all occur in the same pot.
MeO
O
OO THF, -40 °C
MeO
O
OOLi
NPh Me
LiNPh Me
MeO
OO
HOLi
Li
aqueouswork-up
Ene Reactions in Total Synthesis:Ene/Retro-Ene Sequence to Protect Indole
P. S. Baran, C. A. Guerrero, E. J. Corey, J. Am. Chem. Soc. 2003, 125, 5628.P. S. Baran, C. A. Guerrero, E. J. Corey, Org. Lett. 2003, 5, 1999.
NH
NAc
Me Me
CO2MeH
N
NN NMe
O
OH
NN NMe
O
O
+
N
NAc
Me Me
CO2MeH
MTAD = N-methyltriazolinedione
NHN
MeN
O
OCH2Cl2,
0 °C,1 min
150 °C,1 min
MTAD
NH
N
HN
NMeMe
OOH
H
Me Me
MTAD,CH2Cl2,
0 °C, 1 h;
Ene reaction
okaramine N
NH
N
N
NMeMe
OO
OHH
HH
Me MeN
N
N
NMeMe
OOH
H
Me Me
NHN
MeN
O
OOH
H
(70%overall
based onr.s.m.)
110 °C,30 min
1O2(O2,
methyleneblue)
RetroEne
reaction
Protective Groups:Background and General Considerations
Tactical considerations to consider for each protecting group selected in a synthesis:
It should be easily and efficiently introduced.
It should be cheap and readily available.
It should be easy to characterize and avoid the introduction of new stereogenic centers.
It should not afford so many spectroscopic signals that it hides key resonances for the substrate.
It should be stable to chromatography.
It should be stable to a wide range of reaction conditions.
It should be removed selectively and efficiently under highly specific conditions.
The by-products of deprotection shoud be easily separated from the substrate.
Protective Groups:Something to be Very Carefully Considered
O
HN N
HO
O HNO
NH
OMeOMe
MeO
O
TBSO
NH
MeO2C
O
Cl
ClOMe
OTBSO
Me
MeN Me
H
O NHDdm
HNO Boc
O
HN N
HO
O HNO
NH
OHOH
HO
O
HO
NH
HO2C
O
Cl
ClOH
OHO
Me
Me
HN Me
H
O NH2
HNO
vancomycin aglycon
(62% overall)Global deprotections
1. HF•py/py, THF, 0→25 °C, 12 h2. AlBr3, EtSH/CH2Cl2 (1:1), 25 °C, 4 h
K. C. Nicolaou and co-workers, Angew. Chem. Int. Ed. 1998, 37, 2708.
Protective Groups:Orthogonal Sets of Protecting Groups
Orthogonal Set = a groups of protecting groups whose removal is accomplished in any order with reagents and conditions that do not affect protecting groups in any other orthogonal set.
O
OBz
OAcH
PvO
TESOMe
MeMe
TBDPSO
TBSO
Me
OrthogonalSet #1
OrthogonalSet #2
In practice this concept is incredibly difficult to reduce to practice, but it is a useful framework and organizing principle to think about protecting group regimes for a complex molecule synthesis.
Protective Groups:Orthogonal Sets of Protecting Groups
1. Cleavage by basic solvolysis
RO
O
MeROH
OHRO
O
Me RO
ORO
O
RO
O
Cl Cl
Cl Cl ClCl
1 760 16,000 100,000krel
Protective Groups:Orthogonal Sets of Protecting Groups
1. Cleavage by basic solvolysis
2. Cleavage by acidic hydrolysis
RO
O
MeROH
OHRO
O
Me RO
ORO
O
RO
O
Cl Cl
Cl Cl ClCl
1 760 16,000 100,000krel
OO OHHOH OO
RO OMeR R
Other groups easily cleaved by acid
Protective Groups:Orthogonal Sets of Protecting Groups
3. Cleavage by heavy metals
S
S HgCl2 O
Protective Groups:Orthogonal Sets of Protecting Groups
3. Cleavage by heavy metals
4. Cleavage by fluoride
S
S HgCl2 O
Si
MeMeMe
RO MeMeSi
MeMeMe
RO MeMe
n-Bu4NF F H2OROH
-[t-BuMe2SiF]
Strength of Si-F bond is 810 kJ/mol while Si-O bond is 530 kJ/mol
RO n-Bu4N
n-Bu4N
Protective Groups:Orthogonal Sets of Protecting Groups
5. Reductive Elimination
O
RO O
Troc = trichloroethoxycarbonyl
Zn, AcOHROHCl
Cl Cl
O
RO O ZnCl
Cl Cl
HCl
Cl-
-[CO2]
Protective Groups:Orthogonal Sets of Protecting Groups
5. Reductive Elimination
6. β-elimination
O
RO O
Troc = trichloroethoxycarbonyl
Zn, AcOHROHCl
Cl Cl
O
RO O ZnCl
Cl Cl
HCl
Cl-
O
R2N O
O
R2N O R2NH2-[CO2]
Fmoc = 9-fluorenylmethylcarbamate
+
-[CO2]
Mildbase
Protective Groups:Orthogonal Sets of Protecting Groups
7. Hydrogenolysis
OR H2, Pd/C+ ROH O O
R R
Ph
Other examples of cleavable groups
benzyl ether
Protective Groups:Orthogonal Sets of Protecting Groups
7. Hydrogenolysis
8. Oxidation
OR H2, Pd/C+ ROH O O
R R
Ph
ORDDQ or CAN,
THF/H2O+ ROH
MeO
O
OCN
CNCl
ClOxidation viaSingle-electron
transfer
O
MeO
Other examples of cleavable groups
DDQ
benzyl ether
p-methoxybenzylether
Protective Groups:Orthogonal Sets of Protecting Groups
9. Dissolving Metal Reduction
ORLi/NH3,t-BuOH
+ ROHO
OROnly other protecting group
applicable to these conditions
Protective Groups:Orthogonal Sets of Protecting Groups
9. Dissolving Metal Reduction
10. Transition Metal Catalysis (i.e. Allyl-based protecting groups)
ORLi/NH3,t-BuOH
+ ROHO
OR
RO
Pd,morpholine
or dimedone
Can also use (Ph3P)3RhCl and acid
ROHRO
PdL2
Only other protecting group applicable to these conditions
Protective Groups:Orthogonal Sets of Protecting Groups
11. Light
NO2
OR
hν NO
O
ROH
NO2
O
O
OR
NO2
O
O
R
alcohol PG acid PG
+
Protective Groups:Orthogonal Sets of Protecting Groups
11. Light
12. Enzymes
NO2
OR
hν NO
O
ROH
NO2
O
O
OR
NO2
O
O
R
alcohol PG acid PG
O
O
NHFmocO O OMeAcHN
OAcAcO
AcO
O
O
NHFmocOHAcHN
OAcAcO
AcO
O
O
NHFmocO O OMeAcHN
OHHO
HO
wheat germ lipasepapain
cysteinebuffer
+
Protective Groups:Relay Deprotection
O
SO2Ph
Me
Me
MeOMeO
MeO
Cl
Me
O
SO2Ph
Me
Me
MeOMeO
MeO
SO2Ph
Me1. NaSPh2. mCPBA
NaBH4OH
SO2Ph
Me
Me
MeOMeO
MeOH
Me
Relay deprotection: when a protecting group that is stable under most conditions is transformed chemically into a new, and more labile, protecting group.
Protective Groups:Mutual Protection
"Une pierre, deux oiseaux""Zwei Fleigen mit einer Klappe schlagen"
"To kill two birds with one stone"
Me
NCHO
TBSO
HMe
Me
NCO
TBSO
HMe
py•HBr3
pyridine
Br
O HMe
Br
OOHO
HO CO2MeOH
HO HMe
OOHO
HO CO2MeOH Zn,
AcOH(96%)
(96%)
B. M. Trost, M. J. Krische, J. Am. Chem. Soc. 1999, 121, 6131.
Protective Groups:Sometimes Not-So-Innocent Bystanders
O
O
OTs
OTs
NaCN,DMSO80 °C
O
O
OTs CN
OO
NC
Protective Groups:Sometimes Not-So-Innocent Bystanders
O
O
OTs
OTs
NaCN,DMSO80 °C
O
O
OTs CN
OO
NC
O
O Me
MeOO
O Me
MeOBr3B
O
O Me
BrO
Me
O
BBr3 Br
Hydroxyl Protecting Groups:Silyl Ethers
RO SiMe
MeMe RO Si
Et
EtEt RO Si
Me
Met-Bu RO Si
i-Pr
i-Pri-PrRO Si
Ph
Pht-Bu
trimethylsilyl(TMS)
triethylsilyl(TES)
t-butyldimethylsilyl(TBS or TBDMS)
t-butyldiphenylsilyl(TBDPS)
triisopropylsilyl(TIPS)
Hydroxyl Protecting Groups:Silyl Ethers
RO SiMe
MeMe RO Si
Et
EtEt RO Si
Me
Met-Bu RO Si
i-Pr
i-Pri-PrRO Si
Ph
Pht-Bu
trimethylsilyl(TMS)
triethylsilyl(TES)
t-butyldimethylsilyl(TBS or TBDMS)
t-butyldiphenylsilyl(TBDPS)
triisopropylsilyl(TIPS)
Relative Acid Stability1 64 20,000 700,0005,000,000
Relative Base Stability1 10 - 100 20,000 20,000 100,000
(t1/2 in 5% NaOH/MeOH)
(<1 min) (1 min) (> 24 h) (> 24 h) (> 24 h)
(t1/2 in 1% HCl/MeOH)
(<1 min) (<1 min) (<1 min) (255 min) (55 min)
Hydroxyl Protecting Groups:Silyl Ethers
Formation:
R R
OH R3SiCl,imidazole, DMF
R R
OSiR3
or R3SiOTf,2,6-lutidine,
CH2Cl2
Cleavage:
R R
OHFluoride sourceR R
OSiR3
Common Fluoride Sources
HF3HF•NEt3
HF•pyrn-Bu4NF (TBAF)/AcOH
HF•pyr/pyrn-Bu4NF (TBAF)
Hydroxyl Protecting Groups:Silyl Ethers
Selective Monosilylation of Diols is Possible:
NaH (1 eq),THF; TBSCl,
or n-BuLi (1 eq),THF; TBSCl,
HO OH HO OTBS
O
N
O
OH
TESO
MeO
MeOH
ONO
O
O
Me
Me
O OH
OTIPS
O
N
O
OTES
TESO
MeO
MeOH
ONO
O
O
Me
Me
O OH
OTIPS
TESCl,2,6-lutidine,
CH2Cl2,-78 °C(97%)
TESCl/imid and TESOTf/2,6-lutidine gave bis-silylated product
D. A. Evans, D. M. Fitch, Angew. Chem. Int. Ed. 2000, 39, 2536.
Hydroxyl Protecting Groups:Silyl Ethers
Selective Deprotection of Silyl Ethers is Also Possible:
R. A. Holton and co-workers, J. Am. Chem. Soc. 1994, 116, 1599.
O
OHO
OAcH
BzO
AcOMe
MeMe
HO
ONH
Ph
O
OH
PhO Me
Taxol
O
OBOM
OAcH
O
HOMe
MeMe
O
TBSO
Me
O
O
OBOM
OAcH
O
TESOMe
MeMe
O
TBSO
Me
O
HF•pyr, CH3CN,0 °C, 11 h
(100%)
Hydroxyl Protecting Groups:Silyl Ethers
Selective Deprotection of Silyl Ethers is Also Possible:
E. M. Carreira, J. DuBois, J. Am. Chem. Soc. 1995, 117, 8106.
OOCO2HOH
HO2CHO2C
OHO
O
OAc
Me
zaragozic acid
Me
OO
OH
OAcAcOOAc
MeOTBS
TBSO
OO
OH
OAcAcOOAc
MeOH
TBSOCl2CHCO2H
Hydroxyl Protecting Groups:Esters and Carbonates
RO
O
Me RO
O
RO
O
RO
O
RO
O
RO
ORO
ORO
O
acetate (Ac)
Cl Cl
Cl Cl ClCl
chloroacetate dichloroacetate trichloroacetate
F FF
trifluoroacetateMeMeMe
pivaloate (Pv)OMe
benzoate (Bz) p-methoxybenzoate
Hydroxyl Protecting Groups:Esters and Carbonates
RO
O
Me
RO
O
RO
O
RO
O
RO
ORO
O
RO
O
acetate (Ac)
Cl
ClCl ClCl
dichloroacetatetrichloroacetateF FF
trifluoroacetate
MeMeMe
pivaloate (Pv)OMe
benzoate (Bz)p-methoxybenzoate
In general, the ease with which esters hydrolyze under basic conditions increases withthe acidity of the product acid. Sterics also can play a role (i.e. pivaloate group)
< < <
<
<<<
[most stable]
[least stable]
RO
OCl
chloroacetate
All can hydrolyze under acidic conditions, but typically only when water is present.
Hydroxyl Protecting Groups:Esters and Carbonates
RO
O
OMemethyl carbonate
9-(fluorenylmethyl)carbonate (Fmoc)
allyl carbonate (Alloc)
2,2,2-trichloroacetylcarbonate (Troc)
2-(trimethylsilyl)ethyl carbonate (Teoc)
benzyl carbonate (Cbz)
RO
O
O
RO
O
O
RO
O
OCl ClCl RO
O
O
RO
O
O Me
RO
O
O SiMe3
MeMe
t-butylcarbonate (Boc)[resistant to
nucleophilic attack]
[cleaved by mild base] [cleaved with Zn/HOAc] [cleaved with fluoride][cleaved by
hydrogenolysis]
[cleaved with Pd/Nu]
Hydroxyl Protecting Groups:Esters and Carbonates
General methods for the formation of esters and carbonates:
ROH +O
Cl R'
pyridine,4-DMAP O
RO R'
ROH +O
O R'
pyridine,4-DMAP O
RO R'
O
R'
ROH +O
Cl OR'pyridine O
RO OR'
B. Neises, W. Steglich, Angew. Chem. Int. Ed. Engl. 1978, 17, 522.
Hydroxyl Protecting Groups:Esters and Carbonates
General methods for the formation of esters and carbonates:
ROH +O
Cl R'
pyridine,4-DMAP O
RO R'
ROH +O
O R'
pyridine,4-DMAP O
RO R'
O
R'
ROH +O
Cl OR'pyridine O
RO OR'
N
NMe Me4-DMAP
N
NMe Me
OR
X
Proposed acyltransfer reagent
B. Neises, W. Steglich, Angew. Chem. Int. Ed. Engl. 1978, 17, 522.
Hydroxyl Protecting Groups:Esters and Carbonates
Tricks for selective formation of an ester from diol starting materials:
For a review, see: S. Hanessian, S. David, Tetrahedron, 1985, 41, 643.
HO OBnOH toluene,
110 °C
OBnOSn OBu Bu
AcCl,CH2Cl2
0 °CAcO OBn
OH
Bu2SnO
Hydroxyl Protecting Groups:Esters and Carbonates
Tricks for selective formation of an ester from diol starting materials:
For a review, see: S. Hanessian, S. David, Tetrahedron, 1985, 41, 643.
HO OBnOH toluene,
110 °C
OBnOSn OBu Bu
AcCl,CH2Cl2
0 °CAcO OBn
OH
OMe
HOOBn
OMe
HOOH
Bu2SnO, toluene, Δ; BnBr, n-Bu4NI,
25→110 °C
The sterically least encumbered position is always protected selectively; on sugars, if both positions are secondary and sterics are roughly equal, an equatorial alcohol
will be protected selectively over an axially disposed alcohol.
Bu2SnO
Hydroxyl Protecting Groups:Esters and Carbonates
A. G. Myers and co-workers, J. Am. Chem. Soc. 1998, 120, 5319.D. R. Deardorff and co-workers, Tetrahedron Lett. 1986, 27, 1255.
OMe
Me
O
O
OH
OO
MeMe
OHO
O
OCl
OMe
Me
O
O
OH
OO
MeMe
OHO
OHn-PrNH2
(83%)
Examples of selective deprotection:
Hydroxyl Protecting Groups:Esters and Carbonates
A. G. Myers and co-workers, J. Am. Chem. Soc. 1998, 120, 5319.D. R. Deardorff and co-workers, Tetrahedron Lett. 1986, 27, 1255.
OMe
Me
O
O
OH
OO
MeMe
OHO
O
OCl
OMe
Me
O
O
OH
OO
MeMe
OHO
OHn-PrNH2
OAc
OAc
OH
OAc
O
OAc
acetyl-cholinesterase
(94%)(99% e.e.)
PCC
(83%)
Examples of selective deprotection:
Hydroxyl Protecting Groups:Acetals
RO OMe RO O
O
methoxymethylether (MOM)[cleaved withstrong acid]
benzyloxymethylether (BOM)[cleaved by
hydrogenation]
2,2,2-trichloroethoxymethyl ether
[cleaved with Zn]
OMep-methoxybenzyl
ether (PMBM)[cleaved with DDQ]
RO OCl ClCl
RO SMe
methylthiomethylether (MTM)
[cleaved with HgCl2or AgNO3]
RO
2-(trimethylsilyl)ethoxymethyl ether (SEM)
[cleaved with fluoride]
RO O SiMe3
OROtetrahydropyranyl
ether (THP)[cleaved with mild acid]
Hydroxyl Protecting Groups:Acetals
ORO
Formation of acetals:
ROH + R'OCH2X
i-Pr2NEtor NaH,solvent
RO OR'
ROHO
PPTS orp-TsOH
PPTS = pyridinium p-toluenesulfonate
P. A. Grieco and co-workers, J. Org. Chem. 1977, 42, 3772.
+
Hydroxyl Protecting Groups:Ethers
RO RORO
allyl ether[cleaved with
Pd/Nu]
trityl ether[cleaved bystrong acid]
p-methoxybenzylether (PMB)
[cleaved with DDQ]
RO
OMe
OO
R R
Me Me
OO
R R
benzyl ether (Bn)[cleaved by hydrogenation]
dimethyl acetonide[cleaved with acid]
benzylidene acetal[cleaved by hydrogenation]
Hydroxyl Protecting Groups:Ethers
OO
R R
Me Me
Formation of ethers
ROH + R'XNaH,
solventROR'
Exception is trityl groups; they require Ph3CCl and 4-DMAP at elevated temperatures.
O
Me Me Me Me
MeO OMeor or
OMe
Me
OHOH
R R+ H
Concept applies to any group that can be appended to a diol.Thus, to form a benzylidene acetal, one should use benzaldehyde.
Hydroxyl Protecting Groups:Ethers
What about polyols? Which cyclic ether will be formed selectively?
HOOH
Me
OHO
Me Me
p-TsOH(A:B = 5:1)
OH
Me
OO
MeMe
HOO
Me
O
MeMe
+
A B
In general, simple acetonide formation with 1,2-diols occurs in preference to 1,3-diols.Note, though, that benzylidene acetals display reverse selectivity!
D. R. Williams, S.-Y. Sit, J. Am. Chem. Soc. 1984, 106, 2949.
Hydroxyl Protecting Groups:Ethers
What about polyols? Which cyclic ether will be formed selectively?
W. R. Roush, J. W. Coe, J. Org. Chem. 1989, 54, 915.
The case of a 1,2,3-polyol
Me
OH
OHHO
Me
OH
OO
MeMe
HO H OO
HMe
MeMe
Thermodynamic productKinetic product
In general, the more substituted acetonide is favored, especially when the substituents on the 5-membered ring are in a trans orientation; in a cis case, the
less substituted acetonide might be favored.
acetoneacid
+
1:5
Hydroxyl Protecting Groups:Ethers
What about polyols? Which cyclic ether will be formed selectively?
W. R. Roush, J. W. Coe, J. Org. Chem. 1989, 54, 915.
The case of a 1,2,3-polyol
Me
OH
OHHO
Me
OH
OO
MeMe
HO H OO
HMe
MeMe
Thermodynamic productKinetic product
In general, the more substituted acetonide is favored, especially when the substituents on the 5-membered ring are in a trans orientation; in a cis case, the
less substituted acetonide might be favored.
OH
OH
OH
OTBSH O
O
HHO
Me Me
OTBS
OH
OOH
OTBS
H
MeMe0% 100%
acetoneacid
acetoneacid
+
+
1:5
Phenol Protecting Groups
OMe O O O
Protecting groups cleaved by base or acid are typically far more labile on phenols than a standard aliphatic alcohol. This property has important implications, as it explains why phenolic methyl ethers can be cleaved, whereas standard methyl ethers are effectively the Rock of Gibralter when it comes to
deprotection (i.e., it ain't coming off)!
OSiR3 O
O
R O
O
OR O ORacetalsphenyl carbonatesphenyl esterssilyl ethers
methyl ether[cleaved with TMSI,
BBr3, or 9-Br-9-BBN]
t-butyl ether[cleaved with
neat TFA]
benzyl ether allyl ether
Phenol Protecting Groups:Methyl Ethers
OMs
HN NHTfaO
O
HO Cl
OPiv
NH
O
OMeOMe
MeO
O
HN
MeHN
O
AlBr3,EtSH, 0 °C
OMs
HN NHTfaO
O
HO Cl
OPiv
NH
O
OHOH
HO
O
HN
MeHN
O
D. A. Evans and co-workers, Angew. Chem. Int. Ed. 1998, 37, 2700.S. L. Schreiber and co-workers, J. Am. Chem. Soc. 1993, 115, 10378.
Phenol Protecting Groups:Methyl Ethers
MeO
MeO O
O HN OCO2Me
OMe
MeH
MeO
H
HO
HO O
O HN OCO2H
OMe
MeH
HO
H
X1 year of hard work
OMs
HN NHTfaO
O
HO Cl
OPiv
NH
O
OMeOMe
MeO
O
HN
MeHN
O
AlBr3,EtSH, 0 °C
OMs
HN NHTfaO
O
HO Cl
OPiv
NH
O
OHOH
HO
O
HN
MeHN
O
D. A. Evans and co-workers, Angew. Chem. Int. Ed. 1998, 37, 2700.S. L. Schreiber and co-workers, J. Am. Chem. Soc. 1993, 115, 10378.
Carbonyl Protecting Groups
R R'
OMeMeO
R R'OO
R R'O O
dimethyl acetal 1,3-dioxane 1,2-dioxolane
All are formed by the action of an acid with the appropriate alcohol
Reactivity order towards forming these protecting groups:
O
= R R'
OO O O
R
R'
R'
OO
=> > > > >>RO
Carbonyl Protecting Groups
Rates of formation:
HO OHMe Me
HO OHHO OH
O
O
RR
O
O
RR
Rates of cleavage:
> >
>
O
O
RR
MeMe O
O
RR
Me O
O
RR
krel 50,000 5,000 1
> >>
M. Ohno and co-workers, Tetrahedron Lett. 1982, 23, 1087.
Carbonyl Protecting Groups
Me
O
OHO OH
p-TsOH
Me
O
O O
(95%)
Carbonyl Protecting Groups
Me
O
OHO OH
p-TsOH
Me
O
O O
(95%)
Me
O
Me
O
O
Me
O
O
HO OH
acid
fumaric acid (pKa = 3.03)phthalic acid (pKa = 2.89)oxalic acid (pKa = 1.23)p-TsOH (pKa < 1.0)
10070800
03020100
+
Carbonyl Protecting Groups
R R'
SMeMeS
R R'SS
R R'S S
dimethyl thioacetal 1,3-dithiane 1,2-dithiolaneR R'
NC OR
cyanohydrin[deprotected with Hg, NBS, IBX]
Carbonyl Protecting Groups
R R'
SMeMeS
R R'SS
R R'S S
dimethyl thioacetal 1,3-dithiane 1,2-dithiolaneR R'
NC OR
cyanohydrin[deprotected with Hg, NBS, IBX]
RSS
R
NC OR base
RSS
R
NC OR R'X
RSS
R
NC OR
R' R'
O Umpolung = formal reversal of thepolarity of a functional group
" "These groups turnaldehydes into nucleophiles
Special uses for these protecting groups:
or or or
Carboxylic Acid Protecting Groups
R OMe R O
O
methyl ester t-butyl ester allyl ester
OMep-methoxybenzyl ester
Me R O
benzyl ester
R
silyl ester[must be TBS, TBDPS,
or TIPS if you wantto purify by chromatography]
O O MeMe O
O
OR
O
O
R OSiR3
R'
OR
OROR
ortho ester
Amine Protecting Groups
R2N
O
OMemethyl carbamate
9-(fluorenylmethyl)carbamate (Fmoc)
allyl carbamate (Alloc)
2,2,2-trichloroacetylcarbamate (Troc)
2-(trimethylsilyl)ethyl carbamate (Teoc)
benzyl carbamate (Cbz)
R2N
O
O
R2N
O
O
R2N
O
OCl ClCl
R2N
O
OR2N
O
O Me
R2N
O
O SiMe3
MeMe
t-butylcarbamate (Boc)[resistant to
nucleophilic attack]
[cleaved by mild base] [cleaved with Zn/HOAc] [cleaved with fluoride]
[cleaved byhydrogenolysis]
[cleaved with Pd]
R2N
R2N
Protecting Groups:Putting it all Together
OTBDPS
OTESOTMS
MeNH
THPO
MeO2C
OTBDPS
MeNBoc
HO
MeO2C
O
1. Boc2O, Et3N, 4-DMAP, CH2Cl2, 25 °C2. AcOH/H2O (19:1), 80 °C
NaHCO3, DMF, 80 °C(83%)
(62% overall)OTBDPS
HOOH
MeNBoc
HO
MeO2C
p-TsCl, n-Bu2SnO,Et3N, CH2Cl2, 25 °C
OTBDPS
TsOOH
MeNBoc
HO
MeO2C
(84%)
T. Fukuyama and co-workers, J. Am. Chem. Soc. 2002, 124, 2137.
Protective Groups:Sometimes They Really Are Not Needed . . .
O
Me
O
HO
TBSO
MeO
MeO
Me
O Me
MeHO
Me
OMe
O
PMP
O
O
OMe
MeO
Me
OMe
Me OTBS
Me
OMe
O
PMP
Me
OHO
OTBS
O
O
O
Me
O
O
O
Me
OH
HO
Me
OMe
HO HO
Me
MeO
MeOHOH
Me
O Me
OMe
Me
Me
OH
O Me
MeHO
Me
OMe
swinholide A
1. O
Cl
Cl
Cl
ClEt3N, toluene,25 °C, 2.5 h;4-DMAP,80 °C, 15 h
2. HF, MeCN, 0 °C, 105 min
(42% overall)Yamaguchi
macrolactonizationand global
deprotection
With protecting group present on the other alcohol,dramatically lower yields observed
I. Paterson and co-workers, J. Am. Chem. Soc. 1994, 116, 9391.