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OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core 6/21/2013 OpenClinica Global Conference

OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

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Page 1: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

OpenLogisticaA Sample Tracking Add-on to OpenClinica

Jonathan BabbageClinical & Translational Sciences Institute

Biomedical Research Informatics Core

6/21/2013 OpenClinica Global Conference

Page 2: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Who we are

Tools•Clinical Research

Management Systems

•Document Management

•I2B2

Skills•Development•Data

Management•Study Design

Services•Hourly Rates•Percent Effort•Co-Investigator

Clients•CDC•Ohio National

Guard•Epidemiology•Osteopathic

Medicine•Education

Page 3: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Journey

Homebrew

Page 4: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Where we are going

• Adapting Observational Studies to Clinical Trial standards

• Training investigators on differences– Consistent protocol across subject classes– Strict CRF change standards– Adverse event tracking

• Expanding OpenClinica for study needs– PHI, Granulated permissions, Samples,

etc.

Page 5: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

What do we bring?What do we leave behind?

Page 6: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Sample Profile

Page 7: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Who

Page 8: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

When

Manage All Event Definitions in Study Default Study Logistica

Page 9: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

WhatNew Functionality

Page 10: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

All TogetherConsent Form

Page 11: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Can we print yet?

56YGP1-039338-6Consent FormEnrollmentStudy Name

Page 12: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Barcode Templates

Page 13: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Template Items

56YGP1-039338-6Consent FormEnrollment

Page 14: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Can we print yet?

56YGP1-039338-6Consent FormEnrollmentStudy Name

Page 15: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Barcode Templates

Page 16: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Can we print yet?

56YGP1-039338-6Consent FormEnrollmentStudy Name

Page 17: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Adding Subjects

Page 18: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Creating Samples

Create Samples

Page 19: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Sample Generation

Page 20: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Review

Page 21: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

The Next Question

Page 22: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Sample Sets

Page 23: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Sample Sets

00002

LIMS

Page 24: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Set Logistics

• Create samples• Set collected

date• Define status

• Update status • Set ship date• Notify receiving lab• Lock sample status• Lock set contents

• Update sample to received

• Update set to received

• Import manifest into LIMS

Looking for feedback

search sets, unique set, set operations, outside interfaces

Page 25: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Current• SOAP Access to

necessary OpenClinica Data

• Authentication through existing OpenClinica login

• Two changes JSP pages linking to logistics components

• Additional SOAP services (subject group classes)

Future• Expand set logistics

tools• Default reports• Interface integration• Q1 2014 Source release

Page 26: OpenLogistica A Sample Tracking Add-on to OpenClinica Jonathan Babbage Clinical & Translational Sciences Institute Biomedical Research Informatics Core

Questions/Feedback

[email protected]