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    Writing aWriting a

    Research ProtocolResearch Protocol

    Henry Parkman, MDHenry Parkman, MDGI SectionGI Section

    Department of MedicineDepartment of Medicine

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    Goals of PresentationGoals of Presentation

    Importance of writing a research protocolImportance of writing a research protocol

    when conducting a research studywhen conducting a research study

    Types of research protocols with differentTypes of research protocols with different

    formatsformats

    Suggestions for writing a research protocolSuggestions for writing a research protocol

    Example of a research protocolExample of a research protocol

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    What is a Research ProtocolWhat is a Research Protocol

    A research protocol is a document that describesA research protocol is a document that describes

    the background, rationale, objectives, design,the background, rationale, objectives, design,methodology, statistical evaluation of the data,methodology, statistical evaluation of the data,

    and organization of a clinical research project.and organization of a clinical research project.

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    Need for Written Research ProtocolNeed for Written Research Protocol

    forces the investigators to clarify their thoughts and to thinkforces the investigators to clarify their thoughts and to think

    about all aspects of the studyabout all aspects of the studystudystudy

    conduct, analysis ofconduct, analysis of

    the datathe data

    guide for a team working on researchguide for a team working on research

    help ensure study ishelp ensure study is

    performed similarly by different people over timeperformed similarly by different people over time

    essential if study involves research on human subjects or onessential if study involves research on human subjects or on

    experimental animals, in order to get institutionexperimental animals, in order to get institutions ethicals ethical

    approvalapproval

    essential component of a research proposal submitted foressential component of a research proposal submitted for

    fundingfunding

    use to start writing a manuscript when study completeduse to start writing a manuscript when study completed

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    Developing a Clinical Research ProtocolDeveloping a Clinical Research Protocol -- 11

    Start with a good questionStart with a good question --

    one for which theone for which the

    answer matters either to other researchers in theanswer matters either to other researchers in the

    field, practicing clinicians, or patientsfield, practicing clinicians, or patients

    Convert the question to a hypothesis by assertingConvert the question to a hypothesis by asserting

    a positiona position

    Construct the protocolConstruct the protocol

    Generate measures of exposure (treatments)Generate measures of exposure (treatments)and outcomeand outcome

    Test the hypothesis by making a comparison inTest the hypothesis by making a comparison in

    two or more groupstwo or more groups

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    Developing a Clinical Research ProtocolDeveloping a Clinical Research Protocol -- 22

    Develop a plan for data collection andDevelop a plan for data collection andmanagementmanagement

    Determine the statistical methods forDetermine the statistical methods foranalysis, consult with statisticiananalysis, consult with statistician

    Estimate the magnitude of expected differenceEstimate the magnitude of expected differencebetween the two groups, as a basis for determiningbetween the two groups, as a basis for determiningsample size (power calculation)sample size (power calculation)

    Assess feasibility of the study:Assess feasibility of the study:

    Can enough people be obtained for the study?Can enough people be obtained for the study?

    Can the outcome events be observed andCan the outcome events be observed andsuitably analyzed?suitably analyzed?

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    Research Protocol FormatResearch Protocol Format Project titleProject title Project summaryProject summary

    Project descriptionProject description

    RationaleRationale

    ObjectivesObjectives

    Subjects to study: Inclusion/Exclusion criteriaSubjects to study: Inclusion/Exclusion criteria

    MethodologyMethodology

    Data management and analysisData management and analysis

    Sample size needed for the studySample size needed for the study

    Ethical considerationsEthical considerations

    Recruitment plans, CompensationRecruitment plans, Compensation

    Risks, Benefits of the studyRisks, Benefits of the study

    Informed Consent, Approvals (IRB)Informed Consent, Approvals (IRB) ReferencesReferences

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    Project TitleProject Title

    Should be descriptive of the study, butShould be descriptive of the study, but

    conciseconcise

    May need to be revised after completion ofMay need to be revised after completion ofthe writing of the protocol to reflect morethe writing of the protocol to reflect more

    closely the sense of the studyclosely the sense of the study

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    Project Summary (Abstract)Project Summary (Abstract)

    The abstract should concisely summarizeThe abstract should concisely summarize

    the elements of the protocolthe elements of the protocol

    The summary should stand on its own, andThe summary should stand on its own, andnot refer the reader to points in the projectnot refer the reader to points in the project

    descriptiondescription

    Although present first in protocol, writtenAlthough present first in protocol, written

    last, being taken from the subsequent partslast, being taken from the subsequent parts

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    Project Rationale (Background and Significance)Project Rationale (Background and Significance)

    Sets the stage for why the research project should beSets the stage for why the research project should be

    done. Cite appropriate references.done. Cite appropriate references.

    General Format:General Format:

    The condition to be studiedThe condition to be studied

    Treatments currently available, note gaps presentTreatments currently available, note gaps present

    Specific treatment to be studiedSpecific treatment to be studied

    Preliminary data for treatment in the condition to bePreliminary data for treatment in the condition to bestudiedstudied

    Purpose of the studyPurpose of the study

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    Research Objectives (Aims)Research Objectives (Aims)

    Briefly describe the broad objectives and specific aims of thisBriefly describe the broad objectives and specific aims of thisstudy, including the hypotheses. Objectives should be simple,study, including the hypotheses. Objectives should be simple,

    specific, and stated in advance of performing the research.specific, and stated in advance of performing the research.

    E.g., To determineE.g., To determine ..

    After statement of the primary objective, several secondaryAfter statement of the primary objective, several secondary

    objectives may be mentionedobjectives may be mentioned

    List research hypothesesList research hypotheses --

    written as statements of what youwritten as statements of what you

    expectexpect

    Types of Specific AimsTypes of Specific Aims

    Hypothesis aim, based on scientific hypothesis to be testedHypothesis aim, based on scientific hypothesis to be tested

    Exploratory aim seeks to obtain useful data about a specificExploratory aim seeks to obtain useful data about a specific

    questionquestion

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    Study Title:Study Title:

    Use ofUse of SancusoSancuso

    in patients within patients withnausea and/or vomiting fromnausea and/or vomiting from gastroparesisgastroparesis

    The hypotheses to be tested include:The hypotheses to be tested include:

    1)1) SancusoSancuso

    improves symptoms ofimproves symptoms of gastroparesisgastroparesis

    2) Symptoms of nausea and vomiting improve to a2) Symptoms of nausea and vomiting improve to agreater degree than abdominal paingreater degree than abdominal pain

    3) The beneficial response of3) The beneficial response of SancusoSancuso

    is seen inis seen in

    both diabetic and idiopathicboth diabetic and idiopathic gastroparesisgastroparesis

    4) The symptom reduction occurs on the second4) The symptom reduction occurs on the second

    day and continues throughout the treatmentday and continues throughout the treatment

    coursecourse

    HypothesisHypothesis --

    ExampleExample

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    The aim of this study is determine the efficacy ofThe aim of this study is determine the efficacy of SancusoSancuso

    patchpatchin improving symptoms of nausea and vomiting in patients within improving symptoms of nausea and vomiting in patients with

    gastroparesisgastroparesis..

    The specific objectives of this study are:The specific objectives of this study are:

    1) To determine the treatment response of1) To determine the treatment response of SancusoSancuso

    inin

    gastropareticgastroparetic

    patients with nausea and/or vomitingpatients with nausea and/or vomiting --

    TheThe

    percent of patients treated withpercent of patients treated with SancusoSancuso

    that have improvedthat have improved

    symptoms of nausea, vomiting.symptoms of nausea, vomiting.2) To determine which specific symptoms of2) To determine which specific symptoms of gastroparesisgastroparesis

    improveimprove

    nausea, vomiting, early satiety, abdominalnausea, vomiting, early satiety, abdominal

    distension, abdominal paindistension, abdominal pain3) To determine symptomatic responses in both diabetic and3) To determine symptomatic responses in both diabetic and

    idiopathicidiopathic gastroparesisgastroparesis

    4) To determine the time course of symptom improvement with4) To determine the time course of symptom improvement with

    SancusoSancuso

    for symptoms offor symptoms of gastroparesisgastroparesis

    Study AimsStudy Aims --

    ExampleExample

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    Research Design and MethodologyResearch Design and Methodology

    Research DesignResearch Design

    The choice of the design should be explainedThe choice of the design should be explained --

    how it will address studyhow it will address studyobjectivesobjectives

    The research design, methods and procedures should help answer yThe research design, methods and procedures should help answer yourour

    researchresearch question(squestion(s) as written in your study objectives and aims) as written in your study objectives and aims

    Research Subjects or ParticipantsResearch Subjects or Participants

    Inclusion/exclusion criteriaInclusion/exclusion criteria

    In intervention studies, how will subjects be allocated to the tIn intervention studies, how will subjects be allocated to the treatment andreatment and

    comparison groups?comparison groups?

    What are the criteria for discontinuation?What are the criteria for discontinuation?

    InterventionsInterventions

    If an intervention is performed, a description is given of the dIf an intervention is performed, a description is given of the drugs orrugs or

    devices to be used, and whether they are already commercially avdevices to be used, and whether they are already commercially available,ailable,or in phases of developmentor in phases of development

    ObservationsObservations

    What observations will be made, how they will be made, and howWhat observations will be made, how they will be made, and how

    frequently will they be madefrequently will they be made

    Sample size neededSample size needed

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    Data Management and AnalysisData Management and Analysis

    Describe the statistical methods to be used for each studyDescribe the statistical methods to be used for each studyobjectiveobjective

    The protocol should provide information on what types of dataThe protocol should provide information on what types of datawill be obtained and how the data will be managedwill be obtained and how the data will be managed

    Describe plans for data and statistical analyses, including theDescribe plans for data and statistical analyses, including thetiming of interim and subgroup analyses, as appropriatetiming of interim and subgroup analyses, as appropriate

    Describe which subjects will be included in the data analysisDescribe which subjects will be included in the data analysis

    for each of your study objectives (e.g., all participants, allfor each of your study objectives (e.g., all participants, all

    participants dosed, all evaluable participants, etc.)participants dosed, all evaluable participants, etc.)

    What criteria will be used to stop the study, if necessary?What criteria will be used to stop the study, if necessary?

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    Sample SizeSample Size

    The protocol should provide information and justification on theThe protocol should provide information and justification on the

    sample sizesample size

    the number of patients needed to be studiedthe number of patients needed to be studied

    A larger sample size than needed to test the research hypothesisA larger sample size than needed to test the research hypothesis

    increasesincreasesthe cost and duration of the study and will be unethical if it ethe cost and duration of the study and will be unethical if it exposes humanxposes human

    subjects to any potential unnecessary risk without additional besubjects to any potential unnecessary risk without additional benefitnefit

    A smaller sample size than needed can also be unethical if it exA smaller sample size than needed can also be unethical if it exposes humanposes humansubjects to risk with no benefit to scientific knowledgesubjects to risk with no benefit to scientific knowledge

    Calculation of sample size has been made easy by computerCalculation of sample size has been made easy by computer

    software programs. The principles underlying the estimation of tsoftware programs. The principles underlying the estimation of thehesample size should be well understoodsample size should be well understood

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    Ethical considerationsEthical considerations

    Risks, Benefits of the studyRisks, Benefits of the study

    Recruitment plansRecruitment plans

    Compensation for subjects in studyCompensation for subjects in study

    Informed Consent, IBR ApprovalInformed Consent, IBR Approval

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    Getting started on a Research ProtocolGetting started on a Research Protocol

    Read and understand the instructionsRead and understand the instructions

    IRB, pharmaceutical, society, NIH grantIRB, pharmaceutical, society, NIH grant

    submissionsubmission

    Know the time linesKnow the time lines

    Deadline for submissionDeadline for submission

    Know the formatKnow the format

    Electronic/PaperElectronic/Paper

    Notify collaborators in advanceNotify collaborators in advance

    letters, CVletters, CV

    Frequent reviews and critiques by othersFrequent reviews and critiques by others

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    GI Research Project Proposal PresentationsGI Research Project Proposal Presentations

    During the September and October months, our GI ResearchDuring the September and October months, our GI Research

    Conferences are devoted to hearing the projects of the second anConferences are devoted to hearing the projects of the second and thirdd third

    year GI fellows and the GI motility fellowyear GI fellows and the GI motility fellow

    The presentation is 10 minutes long with 5 minutes for questionsThe presentation is 10 minutes long with 5 minutes for questions

    Fellows go over their presentation with their research mentor prFellows go over their presentation with their research mentor prior to theior to the

    presentationpresentation

    General format for the power point slides:General format for the power point slides:

    Title of Project, your name, and name of Research Mentor: 1 slidTitle of Project, your name, and name of Research Mentor: 1 slidee

    Background for project: 1Background for project: 1--2 slides2 slides

    Aims and Hypotheses: 1 slideAims and Hypotheses: 1 slide

    Methods for the project: 1Methods for the project: 1--4 slides4 slides

    What is hoped to be found in the data, importance of project: 1What is hoped to be found in the data, importance of project: 1--22

    slidesslides