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ORAL PRESENTATION Open Access MDR1 gene polymorphisms and HIV therapeutic response in South Indian population Shruthi Lingaiah 1* , Anita Shet 2 , Arun S Shet 1 , Ujjwal Neogi 1 From 2nd International Science Symposium on HIV and Infectious Diseases (HIV SCIENCE 2014) Chennai, India. 30 January - 1 February 2014 Background Multi drug resistance (MDR1) gene polymorphisms can alter the drug transport function of p-glycoprotein and are often associated with resistance to antiretroviral therapy (ART) in HIV-1 patients. In this study, we investigated the association of single nucleotide polymorphisms in MDR1 gene (exon-21 and exon-26) with responsiveness to ART in HIV-1 patients. Methods Eighty HIV-1 infected drug naive patients who had atleast one viral load <150 copies/mL within six months of therapy and 21 healthy subjects were included. The HIV patients were categorized into viral responders (n=40) and non responders, two consecutive viral load 400 copies/mL after six months of ART (n=40). The genotype analysis of G2677T (GG/GT/TT in exon-21) and C3435T (CC/CT/TT in exon-26) was performed using PCR RFLP. Statistical analysis was carried out using chi-square test in SPSSver16. Results The proportion of CC, CT and TT-genotype among the healthy individuals was found to be 0.09, 0.52 and 0.38 whereas GT and TT-genotype was 0.61 and 0.38 respec- tively (No GG-genotype). Among HIV-1 patients, the dis- tribution of CC, CT and TT-genotype between responders and non responders was (0.15 vs 0.07), (0.37 vs 0.50) and (0.50 vs 0.42) and GG, GT and TT was (0.12 vs 0.05), (0.30 vs 0.55) and (0.57 vs 0.40) respectively. Only the GT-genotype was significantly higher in non responders compared to responders (p=0.023). Conclusion The GT-genotype appears to predict poorer response to ART compared to other genotypes. Further studies could define more clearly the prognostic value of MDR1 gene polymorphisms in determining therapeutic response to ART. Authorsdetails 1 Hematology Research Unit, Division of Molecular Medicine, St Johns Research Institute, Bangalore, India. 2 Division of Public health and Infection Disease Epidemiology, St Johns Research Institute, Bangalore, India. Published: 27 May 2014 doi:10.1186/1471-2334-14-S3-O17 Cite this article as: Lingaiah et al.: MDR1 gene polymorphisms and HIV therapeutic response in South Indian population. BMC Infectious Diseases 2014 14(Suppl 3):O17. Submit your next manuscript to BioMed Central and take full advantage of: Convenient online submission Thorough peer review No space constraints or color figure charges Immediate publication on acceptance Inclusion in PubMed, CAS, Scopus and Google Scholar Research which is freely available for redistribution Submit your manuscript at www.biomedcentral.com/submit * Correspondence: [email protected] 1 Hematology Research Unit, Division of Molecular Medicine, St Johns Research Institute, Bangalore, India Full list of author information is available at the end of the article Lingaiah et al. BMC Infectious Diseases 2014, 14(Suppl 3):O17 http://www.biomedcentral.com/1471-2334/14/S3/O17 © 2014 Lingaiah et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

MDR1 gene polymorphisms and HIV therapeutic response in South Indian population

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Page 1: MDR1 gene polymorphisms and HIV therapeutic response in South Indian population

ORAL PRESENTATION Open Access

MDR1 gene polymorphisms and HIV therapeuticresponse in South Indian populationShruthi Lingaiah1*, Anita Shet2, Arun S Shet1, Ujjwal Neogi1

From 2nd International Science Symposium on HIV and Infectious Diseases (HIV SCIENCE 2014)Chennai, India. 30 January - 1 February 2014

BackgroundMulti drug resistance (MDR1) gene polymorphisms canalter the drug transport function of p-glycoprotein and areoften associated with resistance to antiretroviral therapy(ART) in HIV-1 patients. In this study, we investigated theassociation of single nucleotide polymorphisms in MDR1gene (exon-21 and exon-26) with responsiveness to ARTin HIV-1 patients.

MethodsEighty HIV-1 infected drug naive patients who hadatleast one viral load <150 copies/mL within six monthsof therapy and 21 healthy subjects were included. TheHIV patients were categorized into viral responders(n=40) and non responders, two consecutive viralload ≥400 copies/mL after six months of ART (n=40).The genotype analysis of G2677T (GG/GT/TT in exon-21)and C3435T (CC/CT/TT in exon-26) was performed usingPCR RFLP. Statistical analysis was carried out usingchi-square test in SPSSver16.

ResultsThe proportion of CC, CT and TT-genotype among thehealthy individuals was found to be 0.09, 0.52 and 0.38whereas GT and TT-genotype was 0.61 and 0.38 respec-tively (No GG-genotype). Among HIV-1 patients, the dis-tribution of CC, CT and TT-genotype between respondersand non responders was (0.15 vs 0.07), (0.37 vs 0.50) and(0.50 vs 0.42) and GG, GT and TT was (0.12 vs 0.05),(0.30 vs 0.55) and (0.57 vs 0.40) respectively. Only theGT-genotype was significantly higher in non responderscompared to responders (p=0.023).

ConclusionThe GT-genotype appears to predict poorer response toART compared to other genotypes. Further studies coulddefine more clearly the prognostic value of MDR1 genepolymorphisms in determining therapeutic response toART.

Authors’ details1Hematology Research Unit, Division of Molecular Medicine, St John’sResearch Institute, Bangalore, India. 2Division of Public health and InfectionDisease Epidemiology, St John’s Research Institute, Bangalore, India.

Published: 27 May 2014

doi:10.1186/1471-2334-14-S3-O17Cite this article as: Lingaiah et al.: MDR1 gene polymorphisms and HIVtherapeutic response in South Indian population. BMC Infectious Diseases2014 14(Suppl 3):O17.

Submit your next manuscript to BioMed Centraland take full advantage of:

• Convenient online submission

• Thorough peer review

• No space constraints or color figure charges

• Immediate publication on acceptance

• Inclusion in PubMed, CAS, Scopus and Google Scholar

• Research which is freely available for redistribution

Submit your manuscript at www.biomedcentral.com/submit

* Correspondence: [email protected] Research Unit, Division of Molecular Medicine, St John’sResearch Institute, Bangalore, IndiaFull list of author information is available at the end of the article

Lingaiah et al. BMC Infectious Diseases 2014, 14(Suppl 3):O17http://www.biomedcentral.com/1471-2334/14/S3/O17

© 2014 Lingaiah et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the CreativeCommons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, andreproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.