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Macroscopic Reaction Vessel - National University of … · 5 Billion Year Clock. Big Bang of. Evolution. H. 2. O splitting. Oxygenic atmosphere & Ozone layer. Photosynthetic water

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Macroscopic Reaction Vessel

2H2O O2 + 4H+ + 4eSunlight

Organic moleculeof life

+CO2

2H2O 4H+ + 4e CH2OOrganicmolecules

CO2

CO2

O2

O2

Solar Energy

photosynthesis

respiration biomassfood

fossil fuelscombustion

light reactions dark reactions

Biology adopted the perfect solution to the energy problem

Energy

5 Billion Year Clock

Big Bang ofEvolution

H2O splitting

Oxygenic atmosphere&

Ozone layer

Photosynthetic water splitting is“The Engine of Life”

Photosystem II (PSII) is the enzymefound in plants, algae and cyanobacteria

which uses solar energy to split water into molecular

oxygen and reducing equivalents

Plants and Green Algae

0

-1

+1

P680+

P680*Pheo-

PQA

PQB

RedoxscaleeV

P680+ is highly oxidisingEm ~ 1.3eV at pH 7

Tyrz (YZ)

H2O

Red.

Oxid.

Electron transfer in Photosystem II

H+

Water splitting reactionis a four photon process

2H2O + 2PQ O2 + 2PQH2Light (4hv)

PSII

Oxygen emission induced by flashesJoliot & Kok ~1969

+

+

+

2

S-state cycle – Kok & Joliot

dark stable state

Photosystem II (PSII)

Water splitting rapid turnover of D1“a repair process”

From Black Boxto

Atomic Resolution

SPEM

EC X-ray

PSII

1994

1995

1998

2001

2004

Plant PSII

Cyanobacterial PSII

PSII Dimeric Core of T. elongatusDuncan, Nield, Barber (2001) unpublished

46,630 atoms5138 amino acids

X-ray CollaboratorsKristina FerreiraTina IversonKarim MaghlaouiSo Iwata

Joanna KargulJames Murray

Also

19 protein subunits 16 intrinsic + 3 extrinsics35 transmembrane helices57 cofactors

Ferreira et al Science 303(2004)1831-1838Pdf coordinates ref. 1S5L.

Mn4-Ca cluster Mn4-Ca cluster

Per monomer

Comparison of the purple photosynthetic bacterial reaction centre with photosystem II

Bacterial RC D1/D2 PSII monomer

L

M

D1

D2

H

19 subunits4 subunits

Cyt

R. sphaeroides D1 PS IIR. viridis D2

Comparison of bacterial RC and D1/D2 of PSII

Extinsics important for producing 3D crystals

PsbO

P212121

Lumenal view of PSII monomer within the dimer

Side view of cofactors, chlorophylls and carotenoids

14Chls 6Chls 16Chls7 Carotenoidsb

CP43 CP47

14 Chls 16 Chls

13 conserved

CP43 Chls + CP47 Chls

Electron transport cofactors

Active Branch Protective Branch

Non-haem iron and quinonesbicarbonate ligand

PsbE

PsbJ

PsbN

PsbD(D2)

PQ

Diffusion pathway for PQ/PQH2 from the QB pocket to the lipid environment of the membrane

Lumenal view of PSII monomer within the dimer

PQ/PQH2

Electron transport cofactors

Active Branch Protective Branch

“P680” Chlorophylls

Oxygen Evolving CentreAnomalous diffration for Mn (1.89A) and Ca (2.25A)

bicarbonate?

Cubane-like Mn3CaO4 cluster linked to a 4th Mn by a mono-μ-oxo bond

6 + 1 Amino acid ligands5 + 1 D1 protein1 CP43

E

A

BC

D E

Ade

ab

cd

D1 protein

CP43 CP47

Large loops of CP43 and CP47

GGETMRFWD

FFESFPVIL

Water Splitting-Oxygen Evolving Catalytic Site

A344

Is the Ca2+ in the approx right position?Yes it is based on replacement by Sr2+

(Kargul et al 2007 BBA)

Where is Chloride in the OEC?(Murray et al 2008 Energy and Environ.)

Resolution in the 3.0 t0 3.5 Å region

ASP 170

ALA 344

ASP 342

GLU 189

HIS 332

GLU 333CP43

GLU 354

Mn4

Srr

Mn

Kargul et al (2007) BBA Anomalous diffraction at 0.7Å

Is the Ca2+ in the approx right position?Yes it is based on replacement by Sr2+

(Kargul et al 2007 BBA)

Where is Chloride in the OEC?(Murray et al 2008 Energy and Environ.)

Anomalous difference map forbromide at 0.92 ÅMurray et al 2008

What about channelsat the water oxidation site?

2H2O O2 + 4H+ + 4eLight (4hv)PSII

In Out Out P680+

H+ exit/H2O entry seems tobe across PsbO

P680

His 190OEC

K317

E312

D61E65

H228

D224 D158

e-H+

D158D222D223D224H228E229

H2O

H+

Oxygen channel ?

H+Murray & BarberJ. Struct. Biol.

Possible oxygen channel

Murray & BarberJ. Struct. Biol.

2H2O O2 + 4H+ + 4e

Does the structure help understand the mechanism ofwater splitting?

Diagrammatic representationof the water splitting

centre

With two substrate water molecules bond

Mn4

Ca2+

CaO

O O

MnIV MnIV

O

MnIVMnV

O

OHighly electrophilic oxo (or oxyl radical)

S4

Nucleophilic attackH H Cl

Cu+Fe2+

e-

H+

2e-

O2

Fe4+=O HO-Cu2+

3H+

2H2O 2H2O

Mn5+=O HO-Ca2+

O2e-

3H+

e-

H+

Mn2+ Ca2+

3e-

Cyt oxidase PSII

Y/W

DFT-QM/MM S-State Cycle

H+ , O2

H+ , e-

e-

H+ , e-

H+ , e-

2 H2O

Victor Batista, Gary Brudvigand coworkers (Yale)

Chemically feasible?

Fe1

Fe4Fe2

Fe3

Fe4Sx Ni - cluster

Ni

CO + H2O CO2 + 2H+ + 2e

Carbon monoxide dehydrogenase

CO

OH H

Mishra, Christou et al Chem.Commun 2005

*

*

Imperial Yale

Model based on QM/MM calculations by Basita, Brudvig and colleagues in Yale

Sproviero, Gascon, McEvoy, Brudvig, Batista, (2008) J. Am. Chem. Soc. 130, 3428.

This structure fitted the polarisedEXAFS spectra of Yano et al (2006) Science 314 , 821.

Mn3CaO4-cubane with the 4th Mn linked to the cubane by one of its bridging oxygens

remains a feasible working model

Leonardo’s Dream

Our dream

2H2O

Solar energy

2H2

O2

From Natural

A Q Q B

P 680

O

Mn

Mn

Tyr

Acceptor

N

EtO 2 C

NH

O

NN ON N

N NO OO

Me Me

Me

MnMn

Ru

NN

N

NN

to

Photosynthesis

Artificial

Hammerstrom & StyringU. of Uppsala

Fe

O

BOH

Design of an artificial water splitting system

H

MnIVMnIVMnIVMnV

O

OCa

O

OO

Cl

O

Daniel NoceraMIT

Kanan/Nocera Colbalt/phosphate based electrochemical catalyst

2H2O 2H2

O2

O2

Solar Energy (100,000TW)

EnergyTotal global (14TW)

“If a leaf can do it we can do it”

“Its only chemistry”

One hour of solar =annual global energy consumption

“If a leaf can do it we can do it…even better!It’s just chemistry”

EnergyTotal global

(14TW)

Solar Energy (100,000TW)O2

O2

2H2O 2H2

“Nature is miserably inefficient in converting light to useable energy and surely science properlyappliedcould do better”

Lord George PorterOM FRS

Starch Photographof

Jules Verne’s Dream (1875)

“I believe that water will one day be used as a fuel, because the hydrogen and oxygen which constitute it, used separately or together, will furnish an inexhaustible source of heat and light. I therefore believe that, when coal deposites are oxidised, we will heat ourselves by means of water. Water is the fuel of the future”