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Bonding in Molecules Lecture 3 Molecular shapes

Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

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Page 1: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Bonding in Molecules

Lecture 3

Molecular shapes

Page 2: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Bent8OH2, SH2, NH2-, FH2

+

Bent7NH2, PH2, CH2-, OH2

+

Bent6CH2, SiH2, BH2-, NH2

+

Bent5BH2, AlH2, CH2+

Linear4BeH2, BH2+

Linear3LiH2, BeH2+

Bent2 LiH2+

ShapeNo. of valence electronsMolecular species

Known shape of some AH2 molecules

118FH2+

92.1SH2

104.5OH2

103NH2

93SiH2

110CH2

131BH2

angleMolecular species

Page 3: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

D∞h C2v

Page 4: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Walsh diagram

better overlap of H 1s orbitals

poorer overlapof H1s with 2px

remains non-bonding

First order effects

Page 5: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Walsh diagram

mixing can occurbetween 2 orbitalsbecause they both transform as a1 in the lower symmetry

A second order effect(often called a secondorder Jahn Teller distortion)

1

E∝

Page 6: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Walsh diagram

Bent8OH2, SH2, NH2-, FH2

+

Bent7NH2, PH2, CH2-, OH2

+

Bent6CH2, SiH2, BH2-, NH2

+

Bent5BH2, AlH2, CH2+

Linear4BeH2, BH2+

Linear3LiH2, BeH2+

Bent2 LiH2+

ShapeNo. of valence

electrons

Molecular species

Known shape of some AH2 molecules

Recall: a molecule adopts the structure that best stabilises the HOMO. If the HOMO is unperturbed by the structural change under consideration, then the occupied MO lying closest to it governs the geometric preference.

Page 7: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Walsh diagram

90TeH2

90.6SeH291AsH2

92.1SH292PH293SiH2119AlH2

104NH2-99CH2-102BH2-

118FH2+110.5OH2

+115-120NH2+

104.5OH2103NH2110CH2131BH2

2a12 1b1

22a12 1b1

12a122a1

11a12 1b2

2 +

OH2 vs SH2 vs SeH2?

VSEPR?

Decreased s/p hybridisation?(note bonding with pure p orbitals implies 90°angles)

Page 8: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

D∞h C2v

2 x ‘sp’ hybrids + 2 x p lone pairs 3 x ‘sp2’ hybrids + 1 x p lone pair

more p character in bonding orbitals

Page 9: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Strength of 2nd order JT effect proportional to 1/∆E

2 factors to consider:

Decrease in electronegativity destabilises πu

3/4s orbitals of S/Se are lower than 2s of O (increased penetration) and alsooverlap more weakly with H 1s because they are diffuse. Both factors stabilise σg

both make 2nd order JT effect stronger in the heavier elements

2nd order JT effect mixes s character (originally in 2σg) into the lone pair (1πu) so more p character accumulates in the bonding orbitals.

Page 10: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

PES revisited: origin of fine structure

Page 11: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

PES revisited: origin of fine structure

Page 12: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

PES revisited: HF

(0,0) band most intense

higher band most intense narrow band

Page 13: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

PES revisited: H2O

(0,0) band most intense

Page 14: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

The shapes of H3+ and H3

-: 1st order JT effects, 3-centre-4-electron and 3-centre-2-electron bonds

Consider MOs for the 2 limiting shapes for a 3-atom system: linear (D

∞h) and triangular (D3h)

(using the SALCS given in the handout)

D3h

Page 15: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

The shapes of H3+ and H3

-: 1st order JT effects, 3-centre-4-electron and 3-centre-2-electron bonds

Consider MOs for the 2 limiting shapes for a 3-atom system: linear (D

∞h) and triangular (D3h)

D∞h

Page 16: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Walsh diagram

increasing constructive overlap of terminal H 1s

increasing destructive overlap of terminal H 1s

Page 17: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Walsh diagram

H3+

(a 3-centre-2-electron bond)c.f. electron deficient species

such as boranes

H3-

(a 3-centre-4-electron bond)c.f. hypervalent species

such as HF2-, XeF2

orbitally degeneratetherefore a first-orderJT distortion

(1st order) Jahn-Teller theoremIf a non-linear molecule is in an orbitally degenerate state, it will

distort to remove the degeneracy

Page 18: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Bonding in Hypervalent Molecules

XeF2 (‘hypervalent’ = 10 electrons on Xe)

Possible explanations?

Ionic resonance forms?

sp3d hybridisation?

Bond order 0.5

Page 19: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +

Symmetry analysis (D∞h)

Page 20: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +
Page 21: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +
Page 22: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +
Page 23: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +
Page 24: Lecture 3 Molecular shapes - University of Oxfordmcgrady.chem.ox.ac.uk/lectures/bonding_in_molecule/lecture_3.pdf · Lecture 3 Molecular shapes. OH 2, SH 2, NH 2 8 Bent-, FH 2 +