14
€Copvright 1987bv The Hunrana Press Inc. All rights of anv nature whatsoever reserved. 0273 -2289 i 87 r 1673 -0095$02. 60 Enzyme-Cataly zed Synthesis of Nucleoside Triphosphates from Nucleoside Monophosphates ATP from AMP and Ribavirin 5 rtriphosphate from Ribavirin 5'-monophosphate MnnN-Joo KITUI AND GEOnCE M. WNITESIDES* Department of Chemistrg, Haruard Uniuersitg, Cambridge, MA 02138 Received June22, 7987; Accepted September 4, 7987 ABSTRACT Syntheses of adenosine 5'-triphosphate (ATP) from adenositre 5'-monophosphate (AMP) and ribavirin 5'-tripl'rosphate (RTP) from ribavirin 5'-monophosphate (RMP) (1) r,r'ere performed using en- zymes as catalysts.Synthesis of ATP is based on acetvl phosphate. as the phosphate donor, and acetatekinase (Bacillus stenrothentroTthilus, EC 2.7.2.1), adenylatekinase (porcinemuscle, EC 2.7.4.3), and inor- ganic pyrophosphatase (yeast, EC 2.6.7.1) as the catalvsts. Three re- actions on a 150-mmol scale provided ATP as its barium salt in 82% yield and 670/o purity. Synthesis of RTP used phosphoenol pyruvate (PEP) as the phosphate donor, and pyruvate kinase (rabbit muscle, EC 2.7.7.40) and adenylate kinase (rabbit muscle) as the catalysts. A gram-scale reaction provided RTP as its barium salt in 93olo yield and 97o/o purity. This work demonstrates the utility of the autoxidation- resistant acetatekinase from B. stearttthcnnttpthiius, the value clf pvro- phosphatasein controlling the level of pyrophosphate in the reactiotrs and the ability of adenylate kinase to accept at least one substrate other than a derivative of adenosine. Index Entries: Acetate kinase, catalyst for synthesis of nucleo- side triphosphates; adenylate kinase, catalystfor synthesisof nucleo- side triphosphates; ATP, synthesis from AMP; enzymes, catalysts in organic synthesis; nucleoside triphosphates, synthesis from mono- phosphates; ribavirin 5'-triphosphate, synthesis from ribavirin 5'- monophosphate. *Author to whom all correspondence and reprintrequests shouldbe addressed. Applied Biochemistrg and Biotechnologg 95 Vol. 16, 1987

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Page 1: Enzyme-Cataly zed Synthesis of Nucleoside Triphosphates

€Copvr ight 1987 bv The Hunrana Press Inc.Al l r ights of anv nature whatsoever reserved.027 3 -2289 i 87 r 1673 -0095$02. 60

Enzyme-Cataly zed Synthesisof Nucleoside Triphosphates

from Nucleoside Monophosphates

ATP from AMP and Ribavirin 5 rtriphosphatefrom Ribavirin 5'-monophosphate

MnnN-Joo KITUI AND GEOnCE M. WNITESIDES*Department of Chemistrg, Haruard Uniuersitg,

Cambridge, MA 02138

Received June 22, 7987; Accepted September 4, 7987

ABSTRACT

Syntheses of adenosine 5 ' - t r iphosphate (ATP) f rom adenosi t re

5'-monophosphate (AMP) and r ibavir in 5 ' - t r ip l ' rosphate (RTP) f romribavir in 5 ' -monophosphate (RMP) (1) r , r 'ere performed using en-zymes as catalysts. Synthesis of ATP is based on acetvl phosphate. asthe phosphate donor, and acetate k inase (Baci l lus stenrothentroTthi lus,EC 2 .7 .2 .1 ) , adeny la te k inase (porc ine musc le , EC 2 .7 .4 .3 ) , and inor -gan ic pyrophosphatase (yeas t , EC 2 .6 .7 .1 ) as the ca ta lvs ts . Three re -act ions on a 150-mmol scale provided ATP as i ts bar ium sal t in 82%yield and 670/o pur i ty. Synthesis of RTP used phosphoenol pyruvate(PEP) as the phosphate donor, and pyruvate k inase (rabbi t muscle,EC 2 .7 .7 .40) and adeny la te k inase ( rabb i t musc le ) as the ca ta lys ts . Agram-scale react ion provided RTP as i ts bar ium sal t in 93olo y ie ld and97o/o pur i ty. This work demonstrates the ut i l i ty of the autoxidat ion-resistant acetate k inase from B. steart t thcnnttpthi ius, the value cl f pvro-phosphatase in control l ing the level of pyrophosphate in the react iotrsand the abi l i ty of adenylate k inase to accept at least one substrateother than a der ivat ive of adenosine.

Index Entr ies: Acetate k inase, catalyst for synthesis of nucleo-

side tr iphosphates; adenylate k inase, catalyst for synthesis of nucleo-side triphosphates; ATP, synthesis from AMP; enzymes, catalysts inorganic synthesis; nucleoside tr iphosphates, synthesis f rom mono-phosphates; r ibavir in 5 ' - t r iphosphate, synthesis f rom r ibavir in 5 ' -monophosphate.*Author to whom al l correspondence and repr int requests should be addressed.

Applied Biochemistrg and Biotechnologg 95 Vol . 16, 1987

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96 Ki.m and Whitesides

INTRODUCTION

This paper describes enzyme-catalyzed procedures for the conversionof adenosine 5'-tr iphosphate (AMP) to adenosine 5'-tr iphosphate (ATP)and ribavirin 5'-monophosphate (RMP) to ribavirin 5'-triphosphate (RTP).This work is a part of our continuing program in the development of prac-t ical-scale procedures for organic synthesis based on enzymes (2-9).

Our interest stems in the synthesis of ATP stem from its central role inbiosynthesis, and from the opportunity its synthesis presents to developtechniques for ATP regeneratlon without interference from coupled reaC-tions consuming ATP (2). Several procedures are already available for thesynthesis of ATP, including chemical methods (10,17), fermentation (usingwhole cel ls and organelles) (12-15), and enzymatic catalysis (using cel l-free enzymes) (16-18). The previously reported enzymic syntheses havetwo disadvantages. First, they are based on an acetate kinase from E. col ithat contains a thiol group close to the active site (19). This enzvme israpidly deactivated. Second, they use diammonium acetyl phosphate asthe phosphate donor. This compound is dif f icult to prepare on large scale(20).Moreover, ammonium ion reacts with acetyl phosphate in solut ionand forms an insoluble precipitate of magnesium ammonium phosphate.This precipitate both removes from the solut ion the magnesium ion thatis required for act ivi ty of the kinases and occludes part icles of immobil izedenzymes. The procedure reported here uses readily available and inexpen-sive AMP as the start ing material, disodium acetyl phosphate as the phos-phate donor, and acetate kinase (8. stearothermttphi lus)ladenylate kinaseas the catalyst (Scheme I). Disodium acetyl phosphate can be easi ly pre-pared on mol scale (21,22). Acetate kinase from B. stearothermttphi lus rscommercial ly avai lable and no more expensive than the E. col i enzyme. I tdoes not contain a thiol group and is not sensit ive to autor-rxidation (23).Adenylate kinase from porcine muscle is commercial ly avai lable, inex-pensive, and stable ( i f protected against autooxidation) (24).

Ribavir in and i ts phosphorylated derivatives are interesting for theirantiviral propert ies (25-28). We tested two systems for the synthesis ofRTP and RMP: one based on acetyl phosphate, acetate kinase, and ade-nylate kinase (AcP/AcK/AdK); the second on phosphoenol pyruvate,pyruvate kinase, and adenylate kinase (PEP/PK/AdK) (Scheme I). Al-though both systems were successful, we chose the system based onPEP/PK/AdK because the slow rate of enzyme -catalyzed reaction requiresa hydrolyt ical ly stable phosphorylat ing agent.

RESULTS

ATP from AMP

Enzymes were used immobiltzedoxidative and thermal stabilitv of the

Applied Biochemistrg and Biotechnologg

in PAN gels (29). We compared thedioxygen-sensit ive acetate kinases

Vol . 16. 1987

Page 3: Enzyme-Cataly zed Synthesis of Nucleoside Triphosphates

En z g m at ic Sy nthesis of lY ucleo s tde Tr ip ho s p h ate s

Adenylate Kinase

XDP XTP

v

97

AcPPEP

AcPy

Acetate KinasePyruvate Kinase

(x - A')(X = R')

o

*-,L**'(.,)\

- o- P-o- P-o- P-o

HO OH

RTPScheme 1. Conversion of nucleoside monophosphates to nucleoside tr i-

phosphates (A': adenosine; R: r ibavir in).

from E. col i with that of the dioxygen-insensit ive B. stearothermophilus at50'C (Fig. 1). The B. stearothermophilus enzyme was signif icantly morestable. We note that the B. stearothermophilus enzyme is lnore stable, evenin the absence of DTT (an autioxidant), than is the E. coli enzyme in thepresence of DTT, and believe that the B . stearothermophilus enzyme is gen-

o- o- o-t t l

tlo

tlo

tlo

Applied Bio chemistrg and Biotechnolog g Vol . 16, 1987

Page 4: Enzyme-Cataly zed Synthesis of Nucleoside Triphosphates

9B Ktm and Whitesides

erally superior for use in regeneration of ATP in enzym e-catalyzed synthe-sis. We used three dif ferent analyt ical methods for analysis of nucleotides:HPLC provided the most accurate information concerning the amounts ofthese substances present; 3rp NMR spectroscopy al lowed analysis of al lphosphate-containing species; enzymatic assay was generally inferior tcrthe other methods, but was useful for the analysis of start ing materialsand products (30) .

100

60

40

0 10 20 30 40 50 60 70

Time ( h)Fig. 1. Stabi l i ty of acetate k inases from E. col i and B. stearotherntophi lus,

immobi l ized in PAN. The enzyme-containing solut ions were st i r red at pH 7.5and 50 oC under air with DTT for the E. coli enzyme ( O ) and without DTT for theB. stearothermophilus enzyme (f).

\oa -

=

+.()

o)?

:=(UEoTE

Applied Biochemistrg and Biotechnolog y Vol . 16, 1987

Page 5: Enzyme-Cataly zed Synthesis of Nucleoside Triphosphates

Enzgmatic Sgnthesfs of fYucleoside Trtphosphates 99

We performed a number of small-scale reactions to establish condi-tions for larger-scale syntheses. Some useful observations from these pre-liminary experiments follow. First, AcP contains inorganic pyrophosphate(PPi) as a minor impurrty; this compound forms an insoluble magnesiumsalt during the reaction. Addition of inorganic pyrophosphate (PPase)prevents this precipitation by hydrolyzrng pyrophosphate (31). The mag-nesium concentration in the solution should be controlled during thereaction. At the beginning of the reaction, the concentrat ion should below ( -20 mM) to minimize the inhibition of acetate kinase and increased,as the reaction proceeds, to i ts optimal amount: one equiv per equiv oftotal nucleotides at the end of the reaction (e.g., 100 mmol of magnesiumfor a reaction conducted using 100 mmol of AMP). Second, AcP shouldbe kept at 4oC and added continuously to the reaction mixture to rnini-mrze its hydrolytic decomposition. Third, the maximum practical conver-sion of AMP to ATP using this system seems to be approximately 90o/o;this conversion can be increased only at the expense of economy, yield,and purity. The amount of AcP required to obtain this conversion rangesfrom 2.1, per equiv of AMP at low concentrations (30 mM AMP) to 3.0equiv at high concentrat ions (100 mM). Higher conversions of AMP toATP are thermodynamically possible with AcP as phosphate donor, butconcentrat ions of phosphate (and acetate) become high in the reactionmixture, and rates become slow (for reasons we have not establ ished indetai l) . Fourth, the mercaptoethanol required to protect adenylate kinaseagainst autooxidation does not seriously affect the activities of other en-zymes.

Based on these observations, we conducted successive reactions forconversion of AMP to ATP on the 50-mmol scale, with the final concentra-tion of ATP approximately 0.1 M. Details are given in the ExperimentalSection; the course of two representative reactions is given in Fig. 2. Thesereuses of the enzyme resulted in only small losses of Ack and AdK; PPasewas less stable. The ATP from the three combined reactions (0.125 mmol)was isolated as its barium salt in 82o/o yield and 670/o purity (32).

RMP to RTP

Two systems of enzymes, AcP/AcK/AdK and PEP/PK/AdK, weretested in qual i tat ive experiments on assay scale as potential catalysts forthe synthesis of r ibavir in 5'-tr iphosphate (RTP) from ribavir in monophos-phate (RMP). The reactions were followed by:tp NMR spectroscopy. Inde-pendent assay experiments demonstrated that adenylate kinase catalyzesthe phosphorylation of RMP to RDP by ATP, that pyruvate kinase cata-lyzes the phosphorylation of RDP to RTP by PEP, and that acetate kinasecatalyzes the phosphorylation of RDP to RTP by AcP. The most importantof these observations is that adenylate kinase accepts RMP and RTP assubstrates and provides RDP as product. Adenylate kinase has been re-ported to be highly specific for adenosine nucleotides (24); apparently byusing large quanti t ies of enzyme and by accepting slow rates, i t is possible

Applied Biochemistrg and Biotechnolog g VoL 16, 1987

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bq

o+,o-ca-aoF+

(L

o?'6o?

o]C

100 Kim and Whitesides

100

60

40

10 20 30 40 50 60 70

Time (h)Fig. 2. Reaction progress for the enzyme-catalyzed conversions of AMP

to ATP on a SO-mmol sca le ( runs l and 2) . (a ) , run 1 , AMP; (A) , run 1 , ADP; ( I ) ,run 1, ATP; (O), run 2, AMP; (A), run 2, ADP; (E), run 2, NIP.

to observe useful act ivi ty with at least one other nucleoside (RMP). Thisnew activi ty for AdK, combined with the broad substrate acceptabi l i ty ofAcK33 provides the basis for the conversion of RMP to RTP (34).

Although our comparison of the AdK/PK/PEP and AdK/AcK/AcPsystems for conversion of RMP to RTP were quali tat ive and based on 31P

spectroscopic results, i t was clear that both were capable of cataly zingthe conversion. We selected the AdK/PK/PEP system frtr tn,rt reasons: PKis less expensive than AcK; PEP is stable in solut ion and a strong phos-

0

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E n z g m at ic S y nthes is of lY uc Ie o s i.de T r ip ho s p h at e s 101

phorylating agent. It shifts the equilibrium of reaction far toward the pro-duction of RTP and contributes to a high yield and purity for the RTP.Because RMP is a poor substrate for AdK, the stability of the phosphatedonor is important: the spontaneous hydrolysis of AcP experienced duringthe long reaction times required generated high levels of Pi, and resultedin loss of Mg+2 from solution and even slower rates. Reaction was con-ducted using soluble enzymes and starting with 1.7mmol of RMP; at com-pletion, the conversion of RMP to RTP was 98olo (Fig. 3), with no detectableRDP in solution. This distribution of products almost certainly reflectskinetic limitations: The conversion of RMP to RDP by AdK is the slowstep overall in the sequence; conversion of RDP to RTP by PK is probably

-10 -15 -20 -25

PPMFig. 3. Decoupled 31P NMR spectrum for the enzyme-catalyzed conver-

sion of RMP to RTP after 140 h of reaction. Three strong peaks from RTP, a tinypeak from RMP, and no detectable peaks from RDP are observed.

-50

Applied Biochemistrg and Biotechnolog g VoI . 16, 1987

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102 Ki.m and Whitesides

fast. RTP was isolated as i ts barium salt (1.6 mmol) in 93o/o yield and 97o/opurity.

CONCLUSIONS

The procedure described here for the conversion of AMP to ATPsolves several problems encountered in previ()us enzyme-catalyzed syn-t lreses. Substi tut ion of the air-stable AcK from B. stearothermophilus forthe autclxidation sensit ive enzyme from E. col i permits the enzymes tobe reused several t imes rt, i thout signif icarrt loss in act ivi ty. IntroducingPPase into the system minimizes the trcublesome precipitates of insolublemagnesium pyrophosphate. The remain ing d isadvantages of the systemor ig inate in the choice of AcP as the u l t imate phosphory lat ing agent . Thehydrolyt ic instabi l i ty of this substance recluires cool ing and results in theproduction of inorganic phosphate in the reaction mixture. This phosphateis the major impurity in the ATP product. The irrorganic pvrophosphatepresent as a minor impurity in AcP necessitates use of arrother enzymePPase-an enzyme that is neither especial ly inexpensive nor stable-toprevent the fclrmation of insoluble precipitate; this requirement makesthe procedure more compl icated. Nonetheless, h,€ bel ieve that th is proce-dure should be useful when ATP is required as a stoichiometric reagent.The problems stemming from use of AcP nrigl ' r t , of course, be circunr-vented by us ing PEP/PK, but at the increased d i f f icu l ty of prepar ing PEP.

The synthesis of RTP establ ishes a practical procedure using enzvmesfor laboratory-scale preparation of RTP from RMP. It uses PEP as the phos-phate donor; pyruvate kinase and adenylate kinase as the catalysts. I tsadvantages are that i t is straightforward, and provides RTP in high vieldand purity. I ts disadvantages are that i t requires relat ively large quanti t iesof enzymes to achieve useful rates. The part icular procedure fol low,edhere used soluble enzymes that were discarded. Both the synthesis ofATP and RTP would benefi t from application of the MEEC technique (35 ).The observation that AdK accepts RMP and CMP (34) (both with lowrates) suggests that this system may be applicable to other nucleotidemonophosphates. We have not yet examined these systems in suff icientdetai l to understand their kinetics. In part icular, in this system, we do notknow if ATP is required as a phosphate donor, or i f RTP can also serve inthis capacity. We have assumed that the presence of ATP in the reactionmixture is beneficial, but we have not establ ished this assumption experi-mental ly.

EXPERIMENTAL SECTION

Materials

Acetate kinase (E. col i and B. stearothermophilus, EC 2.7.2.1), pyruvatekinase (rabbit muscle, FC2.7.1.40), and inorganic pyrophosphatase (bakers

Ap plied Biochemistrg and Biotechnolog y Vol . 16, 1987

Page 9: Enzyme-Cataly zed Synthesis of Nucleoside Triphosphates

En z g m at tc Sy nthesis of lY ucleo s [de T r ip ho s p h ate s 103

yeast, 8C2.6.1.1) \ \ /ere obtained in lyophil ized form from Sigma. Adenyl-ate kinases (porcine muscle, rabbit muscle, and B. stearothennophilus, EC2.7.4.3) were obtained as lyophil ized pow,der or a crvstal l ine suspensionin ammonium sulfate solut ion from Sigma. Other enzymes and biochem-icals were obtained from Sigma. Al l enzymes obtained in lvophil ized formwere used as received and those in ammonium sulfate solut ion desalteiby dialysis before use; absolute purities were not established. AMP sodiumsalt was obtained in a Kg quanti ty from Kyowa Haako. Ribavir in 5'-mono-phosphate triethylammonium salt was provided by Dr. Steve Tam of Hoff-man LaRoche. Acetyl phosphate sodium salt in aqueous solut ion (22) andphosphoenol pyruvate potassium salt (7) l t ,ere prepared as described.Other biochemicals were obtained from Sigma and used as received.Chemicals were reagent grade arrd used lvi thout further puri f icat ion un-less othenvise ind icated.

Methods

UV spectrophotometr ic measurements were per formed at 25oC. 31P

NMR spectra were recorded using DzO as external NMR krck n, i th theaccumulat ion parameters of pulse angle 45o and pulse delav 15 s (com-pletely proton decoupled). The pH of reaction solut ions \\ ,as control ledr,t ' i th a Fisher penci l combination electnrde and Chemtrix pH control ler.

Enzymatic Assay

Acetate kinases \vere assayed in the direct ion of formation of ATPusing the folkxving coupled reactions

AcP + ADP AcK ' Ac + ATPATP + GlucoS€ HK ' C-6-P + ADP

c-6-P + NADP ( , -6 I ' t ) t r 6-PG + NADPH

The assay solut ion contained buffer (pH 7.5, 175 mM Hepes), 25.5 mMAcP, 9.5 mM ADP, 26.3 mM MgCl2, 5 mM glucose, 0.6 mM NADP, 10U/mL of hexokinase (HK), 5 U/mL of G-6-P dehvdrogena' rse (G-6-P DH),and about 0.02 U/mL of acetate k inase (AcK). Here, 1U of enzymes cata-lvze thc. formatic-rn of l pmole of ATP per min at pH 7.5 and 25 "C.

Adenylate kinases \\rere assayed in the direct ion of formation of ADPusing the fol lowing coupled reactions

AMP + ATP --495- 2 ADP

ADP + PEP I'K ' ATP + pyruvatePyruvate + NADH L-LDlr> L-lactate + NAD.

Tlre assay solut ions contairred buffer (pH 7.5, 182 mM TEA), 5.4 mMAMP, 4.3 mM ATP, 10 mM MgCl2, 1.8 mM PEP, 0.2 mM NADH, 7 tJ lmLof pyruvate kinase (PK), 10 U/mL of L-lactate dehydrogenase (I--LDH),and about 0.02 U/mL of adenylate k inase (AdK).

Inorganic pyrophosphatase (PPase) was assayed using a modif iedFiske Subbarow method (36). The assav solut ion (3 mL) cr-rntained pH

Applied Biochemistrg and Biotechnolog g Vol . 16, 1987

Page 10: Enzyme-Cataly zed Synthesis of Nucleoside Triphosphates

104 Kim and Whttesides

7 .0, 40 mM Tris, \ mM PPi, 33.3 mM MgCl2, and about 0.3 U/mL of PPase.Several assay solut ions were incubated in the water bath kept at 25'C.Periodic ally , an aliquot of solution was removed, 7 mL of phosphate assayreagent were added, and the mixture was al lowed to stand for 30 min.The corresponding quanti t ies of Pi were read from the standard curve.

Enzyme Immobilization

Acetate kinases, adenylate kinases and inorganic pyrophosphatasesfrom several different sources were immobiltzed as described elsewhere(29). A large-scale immobil izat ion of acetate kinase (8, stearotherntophilus)was performed with 7 ̂ g of enzyme and 7 gof PAN-1000 in the presenceof 0.1 M Hepes (pH 7.5) ,10 mM ADP, 20 mM AcP, and 30 mM MgClz(460/0 immobil izat ion yield). A large-scale immobil izat ion of adenylatekinase (porcine muscle) was carr ied out with L0 mg of enzyme and 5 g ofPAN-1000 in the presence of 0.1 M Hepes (pH 7.5), 20 mM ADP, 20 mMMgCl2, and 2 mM DTT (660/0 immobil izat ion yield). A medium-scale im-mobil izat ion of inorganic pyrophosphatase (yeast) was performed with 2mg of enzyme and29 of PAN-1000 in the presence of 0.1 M TEA (pH7.5) ,3 mM PPi, 3 mM MgClz, and 5 mM DTT (47Vo immobil izat ion yield).

Stability of PAN-lmmobilized Acetate Kinases

The E. col i enzymes were suspended in an aclueous scl lut ion contain-ing 50 mM Hepes (pH 7 .5), 10 mM MgClz, and 10 mM DTT, and the B.stearothermoTthi lus enzymes were suspended in an aqueous solut ion con-ta in ing 50 mM Hepes (pH 7.5) and 10 mM MgClz. Each suspension con-tained 2-3 IJlnt l of enzvmes. The solut ions were incubated in the lvaterbath kept at 50oC. Periodical ly, a small al iquot was removed from eachscl lut ion and assayed as described in the section on Enzymatic Assav.

Analysis of Nucleotides

Enzymat ic assays for the determinat ion of pur i t ies of nucleot ides asstart ing materials and prcducts \ , \ ,ere performed as described elsen'here(30) . Spectra for the analys is by: tp NMR spectroscopy were obta ined asdescr ibed in the Methods sect ion. The assay solut ions for 3rP NMR spec-troscctpic measurements \vere prepared as fol lows. Periodical lv, a smallal iquot (1-1.5 mL) was removed from a reaction mixture, the enzvme-containing gels removed by centr i fugation, and the mother l ic. lurtr di lutedto 1.5 mL with dist i l led lryater. The di luted solut ion was transferred into aL0-mm NMR tube and a 5-mm NMR tube containing deuterium oxide wasinserted into the NMR tube for NMR lock. Analysis by HPLC was per-formed with the fol lowing condit ions: reverse-phase C18 Radial-Pak col-umn, 5 mM tetrabutylammonium phosphate in 17o/o MeOH-water, f lowrate of 2 ml/min, 10 pL of inject ion volume, and 254 nm for detectionwavelength. The samples for HPLC were prepared as fol lows. Using adisposable syringe (1 ml-size) with a long needle, 50-100 mL of l iquor

Applied Biochemistrg and Biotechnologg Vol . 16. l9B7

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En z g m atic Sg nthesis of lV ucleo s tde T r i.p ho s p h ate s 105

was withdrawn from an enzyme reactor, transferred to a microcentrifugetube, and diluted to about 1 mL with distil led water. The enzyme-contain-ing gels were removed by centr i fugation. The mother l iquor was f i l teredthrough a 0.45-micron Gelman Acro LC3A disposable f i l ter assembly anddiluted 5-10 t imes with dist i l led water. A small volume (10 pL) of thedi luted solut ion was injected into the HPLC. Each analysis was completewithin L5 min after inject ion.

Synthesis of ATP

ATP was prepared by conducting a 50-mmol scale reaction three times.The f irst run is described as a representative example. A reactor systemwas composed of a three-necked, one-L f lask (f lask A) with a large mag-netic st irbar and three septa, a Fisher penci l combination electrode con-nected to a Chemtrix pH control ler, a 300-mL round f lask (f lask B), two50-mL measuring cyl inders (cyl inders A and B), three LKB peristalt icpumps, an argon supply, a gas bubbler, and an ice bath. Degassed MgClz(1 .1 N ,40 mL) was p laced in cy l i nder A . Degassed NaOH (2 N ,50 mL)was placed in cyl inder B. Degassed AcP (0.75 N, 200 mL) r, t ,as placed inf lask B insulated by the ice bath. The solut ions placed in the cvl inders andflask B were connected separately using a si l icon tube to f lask A via a peri-stalt ic pump. The pump for the addit ion of NaOH was connected to thepH control ler for i ts automatic control l ing. An aclueous solut ion (200 mL)containing 50 mmol of AMP, 1 mmol of ATP, 6 mmol of MgClz, and 1mmol of mercaptoethanol was transferred into f lask A, fol lowed by theaddit ion of immobil ized-enzyme suspension (80 mL) containing 200 U ofAcK, 200 U of AdK, and 50 U of PPase. The electrode connected to the pHcontrol ler was immersed in the solut ion. Final ly, the argc-ln supplv anc.mineral oi l bubbler was connected to f lask A. The pH of the solut ion n'asadjusted to 7 .5 wi th 2 N NaOH and argon was bubbled through the en-zyme-containing solut ion for more than 30 min after f lask A n'as well-capped with septa. Reactir)n was init iated by the addit ion of AcP andMgClz v ia the per is ta l t ic pumps. AcP was added cont inuouslv at a rate of3 mmol per h for 50 h and magnesium chlor ide at a rate of 1 .1mmol per hfor 401r . The pH was kept between 7.4 and7.6by the contro l led addi t ionof 2 N NaOH. Al l solut ions were maintained under argon. The progressof reaction was fol lowed by periodic analysis by HPLC. The reaction wascomplete when the fract ions of AMP/ADP/ATP reached 0.007/0.07910.913(60 h) . At that t ime the solut ion volume was 530 mL.Enzyme-conta in inggel part icles were removed by centr i fugation, washed twice with 200-mLport ions of degassed redist i l led water, assayed by UV, and reused for thenext run. The recovered activi ty for AcK, AdK, and PPase was 99 (100o/o),250 (125olo), and 31 U (627o), respectively. The mother l iquor was storedbelow 0oC. The secc-lnd run was performed as above with the recoveredenzyme plus 20lJ of fresh PPase. The rat io of AMP/ADP/ATP at the endof reaction (60 h) was 0.006/0.09310.901. The activi ty recovery for AcK,AdK, and PPase was 145 (73Yo),240 (960/o), and 30 U (60olo), respectively.

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106 Kim and Whttesides

The third run was performed as above with the recovered enzymes plus55 U of fresh AcK and 20 U of fresh PPase. The ratio of AMPi ADP/ATP atthe end of reaction (60 h), was 0.007/0.098/0.895. The recovered activi tywas 190 (95o/o),250 (725o/o),33U (660/0) each for Ack, AdK, and PPase. Thecombined mother l iquors from the three reactions totale d 1.71 L and con-tained 138 mmol of ATP, 14 mmol of ADP, and 1 mmol of AMP. The solu-t ion in 4 L beaker was cooled to 4"C fol lowed by the slow addit ion of an aqBaBrz solut ion (1.1M, 300 mL) with st irr ing. Then, cold 95o/o ethanol (1000mL) was introduced slowly with st irr ing over 40 min and the solut ion wasallowed to st ir for 4 h at 4oC. The result ing white precipitate was col lectedby centr i fugation at 15,000 rpm, washed twice with 300-mL port ions of40o/o EtOH, once with 300 mL of 95o/o EIOH, and finally once with 300 mLof acetone. The solids were dried for 10 h at room temperature at a pressureof 0.05 torr. The sol ids weighed 158 g and containedl2S mmol (82o/o yield)of ATP having 670/o purity based on BazATP.4HzO. The recovery of en-zymes through three runs was 78, 127 , and 377o each for AcK, AdK, andPPase.

Test of Two-Enzyme Systems for Conversionof RMP to RTP

Adenylate kinase was tested r,r ' i th a solut ion (pH 7.6, 1.5 mL) contain-ing 10 mM RMP, 7 mM ATP, 20 mM MgClz, and 20 U of AdK. The solu-t ion n,as placed in a 10-mm NMR tube, and a 5-mm NMR tube containingDzO was inserted into the tube. The tube was al lowed to stand at roomtemperature for 2 h. Then a 31P NMR spectrum was recorded. A referencespectrum \vas recorded with a solut ion cclntaining everything exceptAdK. Py ruva te k inase was tes ted w i th a so lu t ion (pH 7 .6 ,7 .5 mL) con-taining 10 mM RMP, 25 mM PEP, l mM ATP, 20 mM MgCl2, 20IJ of AdK,and 20 U of PK. Acetate k inase was tested wi th a so lut ion (pH 7.6, 7 .5mL) containing 10 mM RMP, 30 mM AcP, 1 mM ATP, 20 mM MgCl2, 20IJof AdK, and 20 U of AcK.

Synthesis of RTP

A solut ion (30 mL) conta in ing 1.7 mmol of RMP,0.02 mmol of ATP,3.5 mmol of PEP,1.7 mmol of MgCl2, dnd 0.06 mmol of mercaptoethanolwas transferred to a 100-mL three-necked f lask equipped r.t ' i th a magneticst irr ing bar, three septa, a pH electrode connected to a Chemtrix pH con-trol ler, and a nitrogen supply and bubbler. The pH of solut ion was ad-justed to 7 .4 and nitrogen was bubbled through the solut ion after the f laskwas t ightly capped with septa. The reaction was init iated by the addit ionof 50 U of AdK and 50 U of PK. The solut ion was maintained under nitro-gen and the pH was kep t a t7 .4 -7 .6by the con t ro l l ed add i t i on o f 1N HCIsolut ion. The pro€tress of the reaction was fol lowed by periodic 3rP NMRspectroscopy. The addit ional amount of enzymes (100 U of AdK and 70 Uo f PK) was added th ree t imes (a t72 ,96 , and 120 h ) . The reac t ion wasstopped when conversion of RMP to RTP was 98o/o (140 h). RTP was iso-

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En z g m at i"c S g nthesis of fY uc le o s ide T r ip ho s p h ate s 107

la ted as i ts bar ium sal t as fo l lor , r ,s . To the cold so lut ion (35 mL) conta in ingRTP was added s low, ly an ac i BaBr2 solut ion (1.2 g BaBrz.2HzO in 5 mL ofwater) with st irr ing, fol lowed by the slow addit ion of 30 mL of cold cthanol.The heterogeneous mixture was a l lowed to s tand at 4oC overn ight . Thewhi te prec ip i ta te was f i l tered, washed wi th two 30-mL por t ic tns of co ld407o EIOH, with two 30-mL port ions of cold 95o/o ethanol, and f inal ly w,i th30 mL of acetone. The result ing sol id was drie d in i ,acuo in the presence r-rfanhyd PzO, and weighed 1.34g. The enzymat ic assay ind icated th. - r t i t con-tained 1.58 mmol of RTP (93o/o yield, 97o/o purity based on BazRTP.4HzO).

REFERENCES

1. This research was supported bv t l - re Nat ional Inst i tutes of Heal t l r , Gratnt GM30367.

2 . Whi tes ides , G. M. and Wong, C. -H. (1985) , Angeu, . Chent . l t r t . Ed , Enu.24 ,6 1 7 .

3. Jcrnes, J. B. (1986), Tetrnl tcdrtnt 42, 3357.4 . C r a n s , D . C . , K a z l a u s k a s , R . J . , H i r s c h b e . i n , B . L . , W o n g , C . H . , A b r i l , O . ,

and Whitesides, G. M. Metht tds Enzrymtt l , in press.5 . Crans , D. C. and Whi tes ides , G. M. (1985) , l . A t t t . Chur r . Soc . 107,7008;

ib id. , 7019.6 . W o n g , C . - H . , H a y n i e , S . L . , a n d W h i t e s i d e s , G . M . ( 1 9 8 3 ) , I . A m . C J r t , t t t .

Soc . 105, 115.7 . H i rschbe in , B . L , , Mazenod, F . P . , and Whi tes ide .s , G. M. (1982) , l . Org .

Chcnt. 47, 3765.B . W c r n g , C . - H . , M c C u r r y , S . D . , a n d W h i t e s i d e . s , G M ( 1 9 8 0 ) , l . A m . C h t , r r t .

St tc. 102,7938.9 . L a d n e r , W . F . a n d W h i t e s i d e s , G . M . ( 1 9 8 5 ) , I . O r , q . C l t o r r . S 0 , 1 0 7 6 .

10. Dix i t , V. M. and Poul ter , C. D. (7984), Tetral tcdrt tn Lt , t t .25,4055.11. Schei t , K. H. (1980), I ' lucleot ida Ai ln locs; Wi le l ' , Nen'Vrrk, ch. tpr ter 6.12 . Tan i , Y . , Yonehara , T . , M i ta r r i , Y . , and Yamada, H. (1984) , l . B io techno l . 1 ,

119; Tani , Y. , Mitani , Y. , and Yamada, H. (1984) , l . Fentwrt . Technol . 62, 99.13 . Tan i , Y . , M i tan i ,Y . , and Yamada, H. (7984) , Agr ic . B io l . Chetn .48 ,431.14 . Asada, M. , Mor imoto , K . , Nakan ish i , K . , Matsuno, R. , Tanaka, A . , K imura ,

A., and Kamikubo, T. (7979), Agr ic. Biol . Chem. 43,7773.15 . Asada, M. , Nakan ish i , K . , Matsuno, R. , Kar iya , Y . , K imura , A . , Kamikubo,

T. (1978), Agri. Biol. Chem. 42, 1533.16 . Naka j ima,H. , Nagata , K . , Kondo, H. , Imahor i , K . (1984) , I . A1 t1 t l . B i t t cher r t ,

6 ,79 ; Kondo, H. , Tomioka, I . , Naka j ima, H. , and Im. rhr t r i , K . i l ) id . ,29 .17 . Leuchs , H. -1 . , Lewis , l . M. , R ios-Mercad i l lo , V . M. , and Whi te .s ides , G. M

(1979), I, Am. Chem. Soc. 10'l..,5829.18. Baughn, R. L. , Adalsteinsson, O., and Whitesides, G M. (7978), l . Am.

Chem. Soc, 100, 304.19 . Rose, L A . (7962) , inThe Enzymes,2nd ed . , Boyer , P . D. , Lardy , H. , and

Myrback , K . ,eds . , Academic , New York , vo l . 6 , chapter 7 .20 . Lewis , J . M. , Hayn ie , S . L . , and Whi tes ides , G.M. (1979) , l . Org . Chem.44,

864; Whi tes ides , G. M. , S iege l , M. , and Gare t t , P . (1975) , l .Org .Chem.40,2516.

2 1 . K a z l a u s k o , R . J . a n d W h i t e s i d e s , G . M . ( 1 9 8 5 ) , I . O r g . C h e m . 5 0 , 7 0 6 9 .

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Page 14: Enzyme-Cataly zed Synthesis of Nucleoside Triphosphates

108 Kim and Whttesides

22. Crans, D. C. and Whitesides, G. M. (1983), I . Org. Chem.26,3730.23. Nakajima,H., Suzuki, K., and Imahari, K. (1978),I. Biochem.84,193; Methods

E n z y m o l . 9 0 , 7 7 9 .24. Noda, L. In The Enzymes, 3rd ed.; Boyer, P. D., ed. , Academic, New York,

1973; vol. 8, part A, chapter 8.25 . S idwe l l , R . W. , Huf fman, J . H . , Rob ins , R. K . , Khare , G. P . , A l len , L .8 , ,

Witkowski , J. T. , and Ronins, R. K. (7972), Science 177,705.26 . Wi tkowsk i , J .T . , Rob ins , R.K. , S idwe l l , R . W. , and S imon, L . N . (7972) , I .

Med. Chem. 15, 1150.27 . Wi tkowsk i , J .T . , Rob ins , R.K. , Khare , G.P. , and S idwe l l , R . W. (1973) ,1 .

Med. Chem. 't6,

935.28 . A l len , L .8 . , Boswel l , K . H. , Khwaja , T . A . , Meyer , R . 8 . , J r . , S idwe l l , R .

W., and Witkowski , J. T. (1978), l . Med. Chem. 21,,742.29, Pol lak, A. , Blumenfeld, H., Wax, M., Baughn, R. L. , and Whitesides, G. M.

(1980) , I .A* ,Chem. Soc . 1 ,02 ,6324; Po l lak , A . , Baughn, R. L . , Ada ls te ins-son, O., and Whitesides, G. M. (7978), I . Am. Chem. Soc. 100,302.

30. Methods of Enzymatic Analysis,3rd ed., Bergmeyer, H. S., Bergmeye-t , J. ,Grassl , M., eds. , Ver lag Chemie. Weinheim , \983; vol . 2, pp. 333-345; ib id. ;vol .7, pp.3a6-357 and 365-370.

31. Bai ley, K. and Webb, E. C. (1944), Biochem. I .38,394.32. The low purity of ATP reflects the use of an excess of AcP (3 equiv per equiv

of nucleotides) and 90o/o conversion of AMP to ATP. The major impurit ieswere inorganic phosphate, ADP, and AMP.

33. Bauer, P. I . and Varady, C. (1978), Anal . Biochent.91,,613.34. Adenylate kinase also accepts CMP as a substrate, howbeit with low vn'u..

This act iv i ty provides the basis for a svnthesis of CTP: Simon, E. S., Bednar-ski , M. D., and Whitesides, G. M. (1988), Tetral tedron Lett .29,1723; Simon,E. S . , Bednarsk i , M. D. and Whi tes ides , C. M. , I . Am.Chem. Soc . , in p ress .

35 . Bednarsk i , M. D. , Chenau l t , H . K . , S imon, E . S . , and Whi tes ides , G. M.(1987), I. A*. Chem. Soc. 109, 7283.

36. Josse, J. $966), l. Biol, Chem. 241,, 1938.

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