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Enterobacteriac eae basic skills for identification Dr.T.V.Rao MD 10/27/2022 Dr.T.V.Rao MD 1

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  • 1. Dr.T.V.Rao MDDr.T.V.Rao MD2/20/2014

2. Dr.T.V.Rao MD2/20/2014 3. Commonlypresent in large intestine Non sporing , Non Acid fast, Gram bacilli. A complex family of organisms, Some are non pathogenic A few are highly Pathogenic, Some commensals turn out to be pathogenic. as in UTI after catheterization. Dr.T.V.Rao MD2/20/2014 4. Are facultative anaerobes If motile, motility is by peritrichous flagella Many are normal inhabitants of theintestinal tract of man and other animals Some are enteric pathogens and others are urinary or respiratory tract pathogens Differentiation is based on biochemical reactions and differences in antigenic structure 5. Most grow well on a variety of lab mediaincluding a lot of selective and differential media originally developed for the selective isolation of enteric pathogens. Most of this media is selective by incorporation of dyes and bile salts that inhibit G+ organisms and may suppress the growth of nonpathogenic species of Enterobacteriaceae. Many are differential on the basis of whether or not the organisms ferment lactose and/or produce H2S. 6. All EnterobacteriaceaeGram-negative rods Ferment glucose with acid production Reduce nitrates into nitrites Oxidase negative Facultativeanaerobic Motile except Shigella and Klebsiella Non-capsulated except Klebsiella Non-fastidious Grow on bile containing media (MacConkey agar) Dr.T.V.Rao MD 2/20/2014 7. All EnterobacteriaceaeGram-negative rods Ferment glucose with acid production Reduce nitrates into nitrites Oxidase negative Facultativeanaerobic Motile except Shigella and Klebsiella Non-capsulated except Klebsiella Non-fastidious Grow on bile containing media (MacConkey agar) Dr.T.V.Rao MD 2/20/2014 8. Gramnegative bacilli or coccobacilli Non-spore forming Colony morphology on BAP or CA of little value, as they look the same, except for Klebsiella Selective and differential media are used for initial colony evaluation (ex. MacConkey, HE, XLD agars) 9. Some Enterobacteriaceae are true pathogensSalmonella spp. Shigella spp. Yersinia spp. Certain strains of E. coli (ETEC, EPEC, EIEC, EHEC) Mostmembers of the Enterobacteriaceae are opportunistic or cause secondary infections of wounds, the urinary and respiratory tracts, and the circulatory system e.g. E. coli. Enterobacteriaceae divided into TWO main groups according to action on LACTOSE Lactose Fermenters (LF) E. coli, Citrobacter, Klebsiella, Enterobacter Lactose Non-Fermenters (LNF) Salmonella, Shigella, Proteus, Yersinia Dr.T.V.Rao MD2/20/2014 10. EnterobacteriaceaeLactose fermenters E. coli, Citrobacter, Klebsiella, EnterobacterNon-lactose fermenter Salmonell, Shigella Proteus, YersiniaThere are several selective and differential media used to isolate distinguishes between LF & LNF The most important media are: MacConkey agar Eosin Methylene Blue (EMB) agar Salmonella Shigella (SS) agar Dr.T.V.Rao MD In addition to Triple Sugar 2/20/2014 Iron (TSI) agar 11. Oxidase Test NegativePositiveEnterobacteriaceaePseudomonasMacConkeys agar & TSI O/F test: O+/F Nitrate test: +ve furtherreduction to N2Pink colonies on MacConkey colorless colonies on MacConkey & acidic butt and slant on TSI & acidic butt alkaline slant onTSI Growth on cetrimide agar: Lactose non-fermenter Pale colonies with green pigmentationLactose fermenter IMViC test & EMB IMViC ++ - & black colonies with metalic shines on EMBE.coliNo H2S production (no blacking in TSI) IMViC - - ++ShigellaUrease production+veMotilityNot motileH2S production (blacking in TSI)-ve SS agarMotilecolorless colonies with black centers Proteus Dr.T.V.Rao MD 2/20/2014 Salmonella 12. MacConkey agar is selective & differential medium for Enterobacteriaceae MacConkey Agar ContainsBile saltsCrystal violetInhibit growth of G+ve bacteriaLactoseCause of differentialCause of selectivity Lactose feremnters Pink coloniesDr.T.V.Rao MDNeutral redpH indicator Acidic: PinkLactose non feremnters colorless colonies 2/20/2014 13. EnterobacteriaceaeLactose Non-FermentersLactose FermentersNo acidAcid Neutral redColorless coloniesPink coloniesEscherichia coli Klebsiella spp Enterobacter spp Citrobacter sppDr.T.V.Rao MDSalmonella spp Schigella spp Proteus spp 2/20/2014 Yersinina spp 14. Method: MacConkey agar is inoculated with tested organism using streak plate technique Incubate the plate in incubator at 37 C/24 hrs Results: LF organism appears as pink colonies (e.g. E. coli) NLF organism appears as colorless colonies (e.g. Shigella) Flame & Cool 213 4 5Flame & CoolFlame & CoolDr.T.V.Rao MD2/20/2014 15. Colorless colonies Uninoculated plateLactose non feremters Salmonella, Shigella, Proteus Dr.T.V.Rao MDPink colonies Lactose feremters E. coli, Citrobacter Klebsiella, Enterobacter2/20/2014 16. Growth of Enterobacteriaceae on SS agarBoth are lactose fermenters Both Salmonella sp. & Proteus product H2S Pseudomonas colonies are nearly colorless 17. Coli-type colonies are very dark, almost black e.g. E. coli 18. PrincipleAcidic pathwayGlucoseOrAcety methyl carbinol (ACETOIN)Mixed acids pH less than 4.4Barrits A Barrit;s BMethyl Red indicatorRed colorNeutral pathwayVP positive MR positive Klebsiella Dr.T.V.Rao MD 2/20/2014 E. coliPink color 19. Indole,Methyl Red, VogesProsakaur, Citrate (IMViC) Tests: The following four tests comprise aseries of important determinations that are collectively called the IMViC series of reactions The IMViC series of reactions allows for the differentiation of the various members of Enterobacteriaceae. Dr.T.V.Rao MD2/20/2014 20. Principle Certain microorganisms can metabolize tryptophan by tryptophanase The enzymatic degradation leads to the formation of pyruvic acid, indole and ammonia The presence of indole is detected by addition of Kovac's reagent.Tryptophane amino acidsTryptophanaseIndole + Pyurvic acid + NH3 Kovacs ReagentRed color Dr.T.V.Rao MD organic layer` in upper 2/20/2014 21. Method: Inoculate tryptone water with thetested microorganism Incubate at 37 C for 24 hours After incubation interval, add 1 mlKovacs reagent, shake the tubegently and read immediately Dr.T.V.Rao MD2/20/2014 22. Negative test e.g. KlebsiellaResult:A bright pink color in the top layer indicates the presence of indoleThe absence of color means that indole was not produced i.e. indole is negativeSpecial Features:Used in the differentiation of genera and species. e.g. E. coli (+) from Klebsiella (-).Dr.T.V.Rao MD2/20/2014Positive test e.g. E. coli 23. Inoculate the tested organism into One tube of MRVP brothIncubate the tubes at 37 C for 24 hoursAFTER INCUBATION: Pour 1/3 of the suspension into a clean nonsterile tube:Run the MR test in the tube with 2/3, and the VP test in the open tube with1/3. For methyl red: Add 6-8 drops of methyl red reagent.For Voges-Proskauer: Add 12 drops of Barritt's A (-naphthol), mix, 4 drops of Barritt's B (40% KOH), mixLet sit, undisturbed, for at least 1hour Dr.T.V.Rao MD2/20/2014 24. ResultsVoges-Proskauer testMethyl Red testPink: Positive VP (Klebsiella)Red: Positive MR (E. coli) Yellow or orange: Negative MR (Klebsiella)No pink: Negative VP (E. coli)Dr.T.V.Rao MD2/20/2014 25. Principle: CitrateCitrate Utilization TestPyruvateNa2CO3CO2 + Na + H2OAlkaline,pHSimmones Citrate media Contains Citrate as a sole of C sourceBromothymol blue Positive testBlue colourPositive test: Klebsiella, Enterobacter, Citrobacter Negative test: E. coliDr.T.V.Rao MD2/20/2014 26. Method Streak a Simmon's Citrate agar slant withthe organism Incubate at 37 C for 24 hours.Dr.T.V.Rao MD2/20/2014 27. Result Examinefor growth (+) Growth on the medium is accompanied by a rise in pH to change the medium from its initial green color to deep blue Positive Klebsiella, Enterobacter 2/20/2014 Dr.T.V.Rao MDNegative E. coli 28. Principle UreaUrea agar contains urea and phenol red Urease is an enzyme that catalyzes the conversion of urea to CO2 and NH3 Ammonia combines with water to produce ammonium hydroxide, a strong base which pH of the medium. in the pH causes phenol red r to turn a deep pink. This is indicative of a positive reaction for urease UreaseH2OCO2 + NH3NH4 OH in pH Phenol RedMethod Streak a urea agar tube with the organism incubate at 37 C for 24 h Dr.T.V.Rao MD2/20/2014Pink Positive test 29. Result If color of medium turns from yellow to pink indicates positive test. Proteus give positive reaction after 4 h while Kelebsiella and Enterobacter gave positive results after 24 h Positive test Dr.T.V.Rao MD2/20/2014Negative test 30. TSI containsThree different types of sugars Lactose (10 part) Glucose (1 part) Sucrose (10 part)Phenol red (acidic: Yellow)TSI dispensed in tubes with equal butt & slant Principle To determine the ability of an organism to attack a specific carbohydrate incorporated into a basal growth medium, with or without the production of gas, along with the determination of possible hydrogen sulphide production. Dr.T.V.Rao MD2/20/2014 31. Method:Inoculate TSI medium with an organism by inoculating needle by stabbing the butt and streaking the slant Incubate at 37 C for 24 hoursDr.T.V.Rao MD2/20/2014 32. Reaction on TSI Butt colorSlant colorYellowRedYellowRedYellowYellowRedRedH2 S Negative Positive black in buttNegativeNegativeResult s ResultExampleA/Alk/(Glucose fermented)LNF e.g. ShigellaA/Alk/+ (Glucose fermented with H2S)LNF e.g. Salmonella & ProteusA/A/(three sugars are fermented)LF e.g. E. coli, Klebsiella, EnterobacterAlk/Alk/(No action on sugars)Non fermenter e.g. Pseudomonas 33. Results ExampleReaction on TSI Butt color RedSlant color RedH2S NegativeNegative YellowYellowYellowRedRedYellowPositive black in buttNegativeResultAlk/Alk/(No action on sugars) A/Alk/(Glucose fermented without H2S) A/Alk/+ (Glucose fermented with H2S)Non fermenter e.g. PseudomonasLNF e.g. Shigella LNF e.g. Salmonella & ProteusLF e.g. E. coli, Klebsiella, Dr.T.V.Rao MDEnterobacter 2/20/2014A/A/(three sugars are fermented) 34. Summary of morphology, cultural characteristics, and biochemical reactions of Enterobacteriaceae Gram stainOxidaseNitrate reductaseO/FMacCon keySSEMBE. coli-ve rod-ve+veO+/F+LFLFMetallic sheenCitrobacter-ve rods-ve+veO+/F+LFLFDarkKlebsiella-ve rods-ve+veO+/F+LFLFDarkEnterobacter-ve rods-ve+veO+/F+LFLFDarkSalmonella-ve rods-ve+veO+/F+NLFNLF/ H2SColorlessShigella-ve rods-ve+veO+/F+NLFNLFColorlessProteus-ve rods-ve+veO+/F+NLFNLF/ H2SColorlessDr.T.V.Rao MD2/20/2014 35. Summary of morphology, cultural characteristics, and biochemical reactions of Enterobacteriaceae TSIIndoleMRVPCitrateUreaseMotilityE. coliA/A/-+ve+ve-ve-ve-veMotileCitrobacter freundiiA/A/-+ve+ve-ve+ve-veMotileKlebsiella pneumoniaeA/A/--ve-ve+ve+ve+veNon motileEnterobacter cloacaeA/A/--ve-ve+ve+ve+veMotileSalmonella typhiA/Alk/+ -ve+ve-ve+ve-veMotileShigella boydiiA/Alk/--ve+ve-ve-ve-veNon motileProteus mirabilisA/Alk/+ -ve+ve-ve+ve+veMotile SwarwingDr.T.V.Rao MD2/20/2014 36. ProgrammeCreated from Web Sources for skills in Identification ofEnterobacteriaceae email [email protected] Dr.T.V.Rao MD2/20/2014