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DNA and RNA What does DNA look like? What are the elements that makeup DNA?

DNA and RNA

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DNA and RNA . What does DNA look like? What are the elements that makeup DNA?. DNA Structure = String of nucleotides (sugar, phosphate, base) *Adenine *Thymine *Guanine *Cytosine. purines - adenine, guanine pyrimidines - cytosine, thymine.  DNA Nucleotides. Purines. Pyrimidines. - PowerPoint PPT Presentation

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Page 1: DNA and RNA

DNA and RNA

What does DNA look like?What are the elements that makeup DNA?

Page 2: DNA and RNA

DNA Structure= String of nucleotides (sugar, phosphate, base)

*Adenine*Thymine*Guanine*Cytosine

• purines - adenine, guanine• pyrimidines - cytosine,

thymine

Page 3: DNA and RNA

Purines Pyrimidines

Adenine Guanine Cytosine Thymine

Phosphate group Deoxyribose

 DNA Nucleotides

Page 4: DNA and RNA

Francis Crick and James Watson (1953)

Twisted Double Helix

Hydrogen Bonds are the “glue” that keeps

the two strands together

Each strand of the helix is a chain of nucleotides

What holds the strands together?

Page 5: DNA and RNA

Always Together….Great CoupleD

E

N

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H

Y

M

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N

E

U

A

N

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A & T G & C

Page 6: DNA and RNA

Hydrogen bonds

Nucleotide

Sugar-phosphate backbone

KeyAdenine (A)

Thymine (T)

Cytosine (C)

Guanine (G)

 Structure of DNA

Page 7: DNA and RNA

How is DNA organized in a chromosome?

Remember Chromatin??DNA tightly coiled around proteins forming Chromatin which pack together to form thick fibers.

What exactly is chromatin?

ONE nucleus of ONE human cell = more than 1 meter of DNA!!!

Page 8: DNA and RNA

Chromosome

E. coli bacteriumBases on the chromosome

Prokaryotic Chromosome Structure

Section 12-2

Page 9: DNA and RNA

Figure 12-10 Chromosome Structure of Eukaryotes

Chromosome

Supercoils

Coils

Nucleosome

Histones

DNA

double

helix

Page 10: DNA and RNA

How can DNA use its double-stranded structure to its advantage for replication???

Page 11: DNA and RNA

“Something Old…Something New”

Page 12: DNA and RNA

DNA Replication When does this occur in the cell cycle?

1) Enzymes un-twist and unzip the molecule (break H bonds between base pairs).

2) Each strand serves as a template (something “OLD”)

3) Free nitrogen bases form bonds and make complementary strands (Something “NEW”)

Template

4) DNA Polymerase bonds the nucleotides and proofreads the molecule

Page 13: DNA and RNA

 DNA Replication

Growth

Growth

Replication fork

DNA polymerase

New strand

Original strand DNA

polymerase

Nitrogenous bases

Replication fork

Original strand

New strand

Page 14: DNA and RNA

DNA vs. RNA RNA – also a long chain of nucleotides (5-

carbon sugar, phosphate group, nitrogenous base)

Differences:1. RNA sugar = ribose, instead of deoxyribose2. RNA – usually single-stranded3. RNA has uracil to replace thymine (so U

binds with A)

“Always United & Great Couple”

Page 15: DNA and RNA

RNA is in charge of assembling Amino Acids into Proteins

Page 16: DNA and RNA

From DNA(Gene) to Protein

rRNA - ribosomal RNA - location of protein synthesis uses tRNA to make proteins

The players:

DNA - sequences of nitrogen bases forms the genetic code

mRNA - messenger RNA - makes a copy of the DNA in the nucleus and brings it to the rRNA

tRNA - transfer RNA - reads the mRNA and brings specific amino acids to the rRNA

Page 17: DNA and RNA

Step 1: Transcription = recording the message Occurs in nucleus New mRNA strand forms from one of DNA

strands (creating the message) Let’s Practice…

Page 18: DNA and RNA

Transcription Practice

Transcribe the DNA molecule below:

ATTATCGCGTAATGCTAATAGCTAATAGCGCATTACGATTATCG

Template

AUUAUCGCGUAAUGCUAAUAGC

mRNA

transcript

Page 19: DNA and RNA

RNADNA

RNApolymerase

Figure 12–14 TranscriptionAdenine (DNA and RNA)Cystosine (DNA and RNA)Guanine(DNA and RNA)Thymine (DNA only)Uracil (RNA only)

Page 20: DNA and RNA

Step 2: Editing of mRNA

Introns are removed – non coding regions of the DNA molecule

Exons remain – sequences that will be expressed

Page 21: DNA and RNA

Step 3: Translation = Protein Synthesis Occurs at ribosome tRNA reads mRNA which has message from

genetic code (DNA) Genetic code is read 3 letters at a time, so

each word is 3 bases long

Page 22: DNA and RNA

Every 3 letters is a CODON

Each codon codes for a specific amino acid.

What does an Amino Acid do again? Helps make proteins!

• We need codons for Protein Synthesis (Translation)• They are like directions to make proteins

• Every set of directions tells you where to START and where to STOP

• We too have these, we call them the “start and stop codons”

Page 23: DNA and RNA

Codons to remember…

START is always: AUG

STOP is always: UAA UAG UGA

Page 24: DNA and RNA

Translation Explained

tRNA UAC mRNA AUGCGCAUAACGCAU

Start Codon

methionine

Page 25: DNA and RNA

Alternate sequence:

There are 20 different amino acids to be coded for.

There are 64 possible codons.

Start codon

Stop codon

Page 26: DNA and RNA

Figure 12–17 The Genetic Code

Page 27: DNA and RNA

Translation Practice

Make a polypeptide (chain of amino acids) chain from the mRNA molecule

AUGAUCGCGUAUUGCUACUAG - mRNA

methionine-isoleucine-alanine-tyrosine-cysteine-tyrosine STOP

Page 28: DNA and RNA

Figure 12–18 TranslationSection 12-3

Page 29: DNA and RNA

Figure 12–18 Translation (continued)

Section 12-3

Page 30: DNA and RNA

Mutations - changes in the DNA sequence Gene mutation- changes in a single gene

• Point Mutations - substitution of one nucleotide for another

• Frame Shift Mutations - shifting of the genetic code due to insertion or deletion of nucleotide

Chromosomal mutation changes in the entire chromosome (containing many genes)

Page 31: DNA and RNA

Deletion

Duplication

Inversion

Translocation

Figure 12–20 Chromosomal Mutations

Page 32: DNA and RNA

Mutation AnalogyTHE FAT CAT ATE THE RAT

substitution THE FAT CAT ATE THE CAT *The letter “C” was substituted for the “R”

insertion THE FAT CAT ATE THE RAT THC EFA TCA TAT ETH ERA T

*Because the “C” was added, all other letters shifted down, thereby changing the amino acids that are made.C

Deletion THE F T CAT ATE THE RATTHE FTC ATA TET HER AT*Again, the amino acids will change b/c the “F” was removed

A

Page 33: DNA and RNA

Mutation Practice

What will the new amino acid be if the 5th nucleotide is substituted with an adenine?

AUGA CGCGUAUUGCUACUAG - mRNAU

What will the new amino acid sequence be if a guanine is inserted between the 9th and 10th nucleotide ?

ASPARAGINE

GGUA = VALINE

Page 34: DNA and RNA

When a mutation occurs…

If the amino acid sequence is stopped early (a STOP codon is reached) = Nonsense

If the amino acid sequence continues but the wrong amino acids are coded for = Missense

Page 35: DNA and RNA

Putting it all together

What is the amino acid sequence that forms from the following DNA molecule? (DNA synthesis)

TACTACACCGTATAACAGGGCCTAGCAACT

Template

ATGATGTGGCATATTGTCCCGGATCGTTGA

Page 36: DNA and RNA

(Transcription)DNA - TACTACACCGTATAACAGGGCCTAGCAACT

mRNA - AUGAUGUGGCAUAUUGUCCCGGAUCGUUGA

(Translation)

amino acid sequence

methionine-methionine-tryptophan-histidine-isoleucine-valine-proline-aspartic acid-arginine-stop