Detergents and Surf Act Ants 2010

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    Detergents and Surfactants

    Solubilization of membraneproteins

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    Types of membrane proteins

    Transmembrane proteins

    Cytosolic membrane proteins

    External membrane proteins

    Peripheral membrane proteins

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    Noncovalent association with the polar

    ends of transmembrane proteins

    Peripheral Membrane

    Proteins

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    Hydrophobic amino

    acids in light green

    & yellow

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    Single-pass transmembrane

    protein with an helix

    transmembrane domain

    Glycophorin

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    Solubilization of membraneproteins

    Transmembrane proteins are difficultto solubilize because of theirhydrophobicity Requires detergents

    Small amphipathic molecules that formmicelles in water (Fig. 10-23)

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    Solubilization of membrane proteins

    Transmembrane proteins are difficult to

    solubilize because of their hydrophobicity

    Requires detergents

    Small amphipathic molecules that form micelles in

    water (Fig. 10-23)

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    Cross section of a detergent micelle

    SOLUBILIZATION

    The hydrophobic ends of the detergent bind to thehydrophobic region of the transmembrane protein, thereby

    displacing lipid molecules

    Since the other end of the detergent molecule is polar,the protein isbrought into aqueous solution as a detergent-protein complex

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    Detergent solubilization ofmembrane proteins

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    Solubilization of membrane proteins

    Transmembrane proteins are difficult tosolubilize because of their hydrophobicity Requires detergents

    Small amphipathic molecules that form micelles inwater (Fig. 10-23)

    By using detergents, transmembraneproteins can be solubilized and

    reconstituted into liposomes Powerful means of analyzing their properties(Fig. 10-26)

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    Na+- K+ pump solubilized & reconstituted intoliposome

    (ion pump present on plasma membrane of moanimal cells uses ATP for energy)

    Pumps Na+ out of the cell andK+ into the cell

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    Detergents and Surfactants

    Introduction:

    Detergents are a class of molecules whose uniqueproperties enable manipulation (disruption or formation)of hydrophobic-hydrophilic interactions among moleculesin biological samples.

    Although the cleansing action is similar, the detergentsdo not react as readily with hard water ions of calciumand magnesium.

    Detergent molecular structures consist of a longhydrocarbon chain and a water soluble ionic group. Mostdetergents have a negative ionic group and are calledanionic detergents. The majority are alky sulfates.

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    In biological research, detergents are used tolyse cells (release soluble proteins)

    solubilize membrane proteins and lipids. prevent nonspecific binding in affinitypurification and immunoassay procedures, and

    as additives in electrophoresis. Generally, moderate concentrations of mild

    (nonionic) detergents compromise the integrityof cell membranes, thereby facilitating lysis ofcells and extraction of soluble protein, often innative form.

    Using other conditions, detergents effectively

    penetrate between the membrane bilayers atconcentrations suffi- cient to form mixedmicelles with isolated phospholipids andmembrane proteins.

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    Cationic Detergents

    Another class of detergents have a positive ionic

    charge and are called "cationic" detergents. In addition to being good cleansing agents, they

    also possess germicidal properties which makesthem useful in hospitals.

    Most of these detergents are derivatives ofammonia.

    A cationic detergent is most likely to be found in ashampoo or clothes "rinse".

    The purpose is to neutralize the static electrical

    charges from residual anionic (negative ions)detergent molecules. Since the negative chargesrepel each other, the positive cationic detergentneutralizes this charge.

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    Neutral or non-ionic detergents:

    Nonionic detergents are used in dish washing

    liquids. Since the detergent does not have any ionic

    groups, it does not react with hard water ions. The detergent molecules must have some polar

    parts to provide the necessary water solubility. In the graphic on the left, the polar part of the

    molecule consists of three alcohol groups andan ester group.

    The non-polar part is the usual longhydrocarbon chain.

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    Bile Salts - Intestinal Natural Detergents:

    Bile acids are produced in the liver and secreted in the intestine

    via the gall bladder. Bile acids are oxidation products of cholesterol. First the cholesterol is converted to the trihydroxy derivative

    containing three alcohol groups. The end of the alkane chain at C# 17 is converted into an acid, and finally the amino acid, glycine

    is bonded through an amide bond. The acid group on the glycineis converted to a salt.

    The bile salt is called sodiumglycoholate. Another salt can bemade with a chemical called taurine.

    The main function of bile salts is to act as a soap or detergent inthe digestive processes. The major action of a bile salt is toemulsify fats and oils into smaller droplets. The various enzymescan then break down the fats and oils.

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    In a solubilization process, the detergent molecules bindwith their hydrophobic part to the hydrophobic region ofthe protein.

    In this process they remove part of the phospholipids which

    surround the protein in its natural environment.

    Since the hydrophilic part of the detergent points awayfrom the protein and interacts with the watery milieu, withenough detergent bound, the protein may go into solution and if you are lucky it keeps its conformation.

    Solubilised membrane proteins are therefore complexeswhich consist out of protein, detergent and remainingphospholipids.

    The share of each component depends on the composition ofthe solubilisation buffer and the nature and concentration

    of the detergent. Usually detergent and phospho- lipids make up 10-50% of

    the complex.

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    micelles

    Detergents at low concentration in aqueous solution form amonolayer at the air-liquid interface.

    At higher concentrations, detergent monomers aggregateinto structures called micelles (Figure 5).

    A micelle is a thermodynamically stable colloidal aggregate

    of detergent monomers where in the nonpolar ends aresequestered inward, avoiding exposure to water, and thepolar ends are oriented outward in contact with the water.

    Both the number of detergent monomers per micelle(aggregation numberN)

    and the range of detergent concentration above whichmicelles form (called the critical micelle concentration,CMC) are properties specific to each particular detergent.

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    the critical micelle concentration,CMC)

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    Detergent properties are affected byexperimental conditions such as concentration,temperature, buffer pH and ionic strength, and

    the presence of various additives. For example, the CMC of certain nonionic

    detergents decreases with increasingtemperature, while the CMC of ionic detergents

    decreases with addition of counter ion as aresult of reduced electrostatic repulsion amongthe charged head groups.

    In other cases, additives such as urea

    effectively disrupt water structure and cause adecrease in detergent CMC. Generally, dramatic increases in aggregation

    number occur with increasing ionic strength.

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    In other cases, additives such as ureaeffectively disrupt water structure and

    cause a decrease in detergent CMC.Generally, dramatic increases inaggregation number occur with increasingionic strength.

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    Organic Chemistry

    - Extraction of Analgesic Components

    Extraction is apurification technique in which compounds

    with different solubilities are separatedusing solvents of

    different polarities. This basic chemical process is often

    performed in conjunction with reversible acid/base reactions.

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    Liquid-Liquid

    Extraction

    Requirements for a liquid-liquid extraction:

    two immiscible liquidswith different

    densities & different refractive indices

    Recognize which layer is which (organic vs. aqueous phases)& understand which compounds are dissolved in each phase.

    Why

    separatory

    funnel

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    Liquid-Liquid Extraction

    Immiscible non-mixing (i.e. oil and water)

    Immiscible liquids have significantly different solubilities/polarities

    which keep them from dissolving each other (in reality they are not

    completely non-mixing, there is some carry over). Still they must

    physically separate (density) and be visibly distinguishable (nD).

    Common Immiscible Mixes

    oil spill oil & water

    salad dressing oil &

    vinegar

    ether extraction EtO2 &

    water

    Associated Terms

    hydrophilic hydrophobic

    polar nonpolar

    water layer organic layer

    aqueous phase organic phase

    {aqueous base} {CH2Cl2 layer}

    emulsion

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    Extraction is a process that separates components based

    upon chemical differences rather than differences in physical

    properties.

    The basic principle behind extraction involves the contacting

    of a solution with another solvent that is immiscible with the

    original.

    The solvent is also soluble with a specific solute contained in

    the solution.

    .

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    solvent extraction

    Liquid extraction (or solvent extraction) refers to anoperation in which the components of a liquidmixture are separated by contacting it with a suitableinsoluble liquid solvent which preferentially dissolvesone or more components.

    the separation of the components depends upon theunequal distribution of the components between theimmiscible liquids.

    The feed solution represents one phase and thesolvent to be used to effect separation representsthe second phase.

    The mass transfer of the solute liquid takes placefrom the feed solution to the solvent phase.

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    Two phases are formed after the addition of the solvent, due to the

    differences in densities.

    The solvent is chosen so that the solute in the solution has moreaffinity toward the added solvent.

    Therefore mass transfer of the solute from the solution to the

    solvent occurs.The solution to be extracted is called the feed.

    The liquid extraction liquid is called the solvent.

    The residual liquid solution from which the solute is

    removed is called the raffinate.The extracted solvent rich product is called the

    extract.

    The extract phase contains the desired product in a

    larger proportion

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    solution of acetic acid in water is contacted with a

    solvent such as ethyl acetate then two phases will

    results. The extract (ester/organic layer) will contain most of

    acetic acid in ethyl acetate with a small amount

    water.

    The raffinate (aqueous layer) will contain a weak

    acetic acid solution with a small amount of ethyl

    acetate.

    The amount of water in the extract and ethylacetate in the raffinate depends upon their

    solubilties in one another.

    Th Di t ib ti C ffi i t

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    The Distribution Coefficient

    In dilute solutions at equilibrium, theconcentration of the solute in the two

    phases is called the distribution coefficient

    or distribution constant K.

    K= CE/CR

    Where the CE and CR are the

    concentrations of the solute in the extract

    and the raffinate phases respectively.

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    The Distribution Coefficient

    The distribution coefficient can also be given

    as the weight fraction of the solute in the two

    phases in equilibrium contact:

    K = y*/x

    Where y* is the weight fraction of the solute in

    the extract and x is the weight fraction of the

    solute in the raffinate.

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    Modes of Operation: Cross-Current

    Cross-current mode is mostly used in batch

    operation.

    Batch extractors have traditionally been used

    in low capacity, \multi-product plants typically

    found in the pharmaceutical and agrochemical

    industries.

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    Osmosis

    Osmosis is the spontaneous net movementof water across a semipermeable membranefrom a region of low solute concentration toa solution with a high solute concentration,

    down a solute concentration gradient. It is a physical process in which a solvent

    moves, without input of energy, across a semi

    permeable membrane (permeable to thesolvent, but not the solute) separating twosolutions of different concentrations.

    http://en.wikipedia.org/wiki/Semipermeable_membranehttp://en.wikipedia.org/wiki/Semipermeable_membrane
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    Osmosis

    Net movement of solvent is from the less-

    concentrated (hypotonic)

    to the more-concentrated (hypertonic)

    solution,

    which tends to reduce the difference in

    concentrations.

    This effect can be countered by increasing the

    pressure of the hypertonic solution, with

    respect to the hypotonic.

    http://en.wikipedia.org/wiki/Hypotonichttp://en.wikipedia.org/wiki/Hypertonichttp://en.wikipedia.org/wiki/Hypertonichttp://en.wikipedia.org/wiki/Hypotonic
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    osmotic pressure

    The osmotic pressure is defined to be thepressure required to maintain an

    equilibrium, with no net movement ofsolvent.

    Osmotic pressure is a colligative property,meaning that the property depends on the

    molar concentration of the solute but not onits identity.

    Osmosis is the result ofdiffusion across a

    semi-permeable membrane

    http://en.wikipedia.org/wiki/Osmotic_pressurehttp://en.wikipedia.org/wiki/Osmotic_pressurehttp://en.wikipedia.org/wiki/Pressurehttp://en.wikipedia.org/wiki/Colligative_propertieshttp://en.wikipedia.org/wiki/Concentrationhttp://en.wikipedia.org/wiki/Diffusionhttp://en.wikipedia.org/wiki/Diffusionhttp://en.wikipedia.org/wiki/Concentrationhttp://en.wikipedia.org/wiki/Colligative_propertieshttp://en.wikipedia.org/wiki/Pressurehttp://en.wikipedia.org/wiki/Osmotic_pressurehttp://en.wikipedia.org/wiki/Osmotic_pressure
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    Osmotic pressure

    Diffusion of water across a membrane -osmosis - generates a pressure called

    osmotic pressure. If the pressure in the compartment into

    which water is flowing is raised to theequivalent of the osmotic pressure,

    movement of water will stop. This pressure is often called hydrostatic

    ('water-stopping') pressure.

    -The term osmolarity is used to describe the

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    -The term osmolarity is used to describe the

    number of solute particles in a volume of fluid.

    Osmoles are used to describe the

    concentration in terms of number of particles

    a 1 osmolar solution contains 1 mole of

    osmotically-active particles (molecules and

    ions) per liter.

    The classic demonstration of osmosis and

    osmotic pressure is to immerse red blood cells

    in solutions of varying osmolarity and watchwhat happens.

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    The osmotic pressure of a dilute solution is

    found to obey a relationship of the same form

    as the ideal gas law:

    it is usually expressed in terms of the molarity

    of the solution and given the symbol p.

    http://hyperphysics.phy-astr.gsu.edu/hbase/kinetic/diffus.htmlhttp://hyperphysics.phy-astr.gsu.edu/hbase/kinetic/idegas.htmlhttp://hyperphysics.phy-astr.gsu.edu/hbase/chemical/solution.htmlhttp://hyperphysics.phy-astr.gsu.edu/hbase/chemical/solution.htmlhttp://hyperphysics.phy-astr.gsu.edu/hbase/kinetic/idegas.htmlhttp://hyperphysics.phy-astr.gsu.edu/hbase/kinetic/diffus.html
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    In chemistry texts, it is usually expressed in

    terms of the molarity of the solution and given

    the symbolp

    .M is the molar concentration of dissolved species (units ofmol/L).

    R is the ideal gas constant (0.08206 L atm mol-1 K-1, or other

    values depending on the pressure units).

    Tis the temperature on the Kelvin scale.

    Osmotic Pressure in atm. = Molarity ( R ) (Kelvin Temp.)

    http://hyperphysics.phy-astr.gsu.edu/hbase/chemical/solution.htmlhttp://hyperphysics.phy-astr.gsu.edu/hbase/chemical/solution.html
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    One of the goals here is to solidify the idea of describing solutions in terms of

    molarity versus mass concentration (grams/liter). In the images below MW is

    an abbreviation for molecular weight (grams per mole).

    Example 1: Glucose is a monosaccharide and

    sucrose (table sugar) is a disaccharide.

    http://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.html
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    Example 2: Same solutes as in Example 1, but

    their concentrations are presented differently.

    http://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.html
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    NaCl or sodium chloride is, of course, table

    salt. Before doing the problem, think about

    what happens to salt when it is dissolved in

    water.

    http://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.html
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    Example 4: Albumin is the most abundant

    protein in blood. Glycine is an amino acid -

    assume that it is not a salt.

    http://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.html
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    Example 5:Insulin is a small protein

    hormone that is critical for

    maintaining normal blood glucose

    concentrations.

    http://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.htmlhttp://www.vivo.colostate.edu/hbooks/pathphys/endocrine/pancreas/insulin.htmlhttp://www.vivo.colostate.edu/hbooks/pathphys/endocrine/pancreas/insulin.htmlhttp://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.html
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    Example 6: KCl or potassium chloride is an

    inorganic salt. For the first time, we see a

    mixture of solutes in the right compartment.

    http://www.vivo.colostate.edu/hbooks/cmb/cells/pmemb/osmosis_eg.html