1
CYCLODEXTRIN PROTECTS PODOCYTES IN FOCAL SEGMENTAL GLOMERULOSCLEROSIS (FSGS) Alla Mitrofanova 1,2,3 , Patricia Wahl 1,2 , Ximena Morales 1,2 , Mayrin Correa 1,2 , Christopher Pedigo 1,2,4 , Gloria-Michelle Ducasa 1,2,4 , George W Burke 2,3 , Matthias Kretzler 5,6 , Sebastian Martini 5 , Sandra Merscher 1,2,4 , and Alessia Fornoni 1,2,4 1 Division of Nephrology and Hypertension, Department of Medicine; 2 Peggy and Harold Katz Family Drug Discovery Center; 3 Department of Surgery; 4 Department of Molecular and Cellular Pharmacology, University of Miami, Miller School of Medicine, Miami, FL; 5 Department of Internal Medicine, Division of Nephrology; 6 Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan BACKGROUND HYPOTHESIS METHODS SUMMARY CONCLUSION REFERENCES Correspondence: Alla Mitrofanova, e-mail: [email protected]; Alessia Fornoni, e-mail: [email protected] Address: Peggy and Harold Katz Drug Discovery Center, Department of Medicine, University of Miami, 1580 NW 10th Ave, Batchelor Bldg, Miami, FL, 33136 Conflict of interests: S.M., A.F. and G.W.B. are inventors on pending or issued patents aimed to diagnose or treat proteinuric renal diseases. They stand to gain royalties from their future commercialization. A.F. is a consultant for Hoffman-La Roche, Boeringher Ingheleim, Abbvie, Alexion, Jannsen, Genentech, Brystol Mayer Squibb and for Mesoblast on subject matters that are unrelated to this publication. Alessia Fornoni is Vice-President and Chief Scientific Officer of L&F Health LLC. Acknowledgments: this study is supported by US National Institute of Health (NIH, http://www.nih.gov/) (DK090316), by the Diabetes Research Institute Foundation, by the Nephcure Foundation, by the Peggy and Harold Katz Family Foundation, by the Diabetic Complications Consortium (DiaComp), by Stanley J. Glaser Foundation Research Award, by the NIH/NIDDK (5U24DX076169) and by the National Center for Advancing Translational Sciences (1UL1TR000460). RESULTS Many Lipid Related Genes are Altered in Glomeruli Affected by FSGS Focal segmental glomerulosclerosis (FSGS) is the most common primary glomerular disease leading to end-stage kidney disease (ESKD) due to glomerulonephritis in the US, particularly in children and young adults. Approximately 2000 individuals reach ESKD each year. The estimated life-time risk for FSGS is 0.17% in European Americans and 0.72% in African Americans [1]. Susceptibility to FSGS in African Ameri- cans is associated with genetic variants of the APOL1 gene (G1 and G2) [2]. It has become clear in the last few years that FSGS represents a heterogeneous group of diseases. The Nephrotic Syndrome Study Network (NEPTUNE) study has created a novel individualized approach to pro- file proteinuric patients using morphological and expression profiles descriptors. The NEPTUNE study has also allowed us to identify key molecular pathways that are dysregulated in clinical FSGS, thus allowing for a more clinically meaningful effort in designing related experimental studies. The pathogenesis of FSGS is associated with podocyte injury ultimately leading to glomerulosclerosis and end-stage kidney disease [3-7]. Podocytes contribute to the glomerular filtration barrier through a tight regulation of actin cytoskeleton remodeling [8,9]. However, the mechanisms leading to podocyte injury in FSGS remain poorly understood. Glomeruli from patients with type 2 diabetes and diabetic kidney disease (DKD), where podocyte injury is an early finding and podocyte loss (podocytopenia) is an independent pre- dictor of disease progression [5], demonstrated a modulation of several genes primarily involved in choles- terol efflux. While cholesterol may play an important role in granting proper localization of slit diaphragm proteins, accumulation of cellular cholesterol may negatively affect podocyte function [10]. In support of a causative role of cellular cholesterol in the pathogenesis of podocyte injury, we have re- cently demonstrated that sequestration of cellular cholesterol with hydroxypropyl-beta cyclodextrin (CD) may protect from proteinuria in experimental DKD [10]. Whether cellular cholesterol may affect podocyte function in diseases other than DKD remains to be established. With this preliminary study, we have therefore tested the hypothesis that lipid related genes are modulated in FSGS and that CD treatment protects from experi- mental FSGS. Cyclodextrin Protects Podocytes in Experimental FSGS in vivo H/E staining PAS staining Control CD Adriamycin Adriamycin + CD Figure 3. Histological analysis (H/E and PAS) of glomeruli in experimental model of FSGS in vivo. Four experimental groups of 5-week-old BALB/c female mice were analyzed: control (n=5), 2-hydroxypropyl-beta-cyclodextrin (CD, 40 mg/kg per day) only (n=5), adriamycin only (n=5) in dosage 11 mg/kg, and adriamycin+CD (n=5). Adriamycin treated mice are characterized by significantly increased mesangial expansion, which is completely prevented after CD administration. Figure 4. Adriamycin (ADR) administration causes albuminuria in vivo and cyclodextrin (CD) treatment protects from the development of albuminuria. Acute adriamycin administration of BALB/c female mice inravenously results in high albuminuria over one week. Treatment with cyclo- dextrin prevents development of albuminuria in mice in 10 weeks. *p<0.05 (t-test) when comparing adriamycin + cyclodextrin (ADR+CD) group of mice to adriamycin (ADR) group of mice. 0 2 4 6 8 10 0 200 400 600 800 1000 Control ADR+CD ADR CD * Weeks of treatment Alb/Creat(ug/mg) Control CD ADR ADR+CD 0 20 40 60 * BUN (mg/dl) Control CD ADR ADR+CD 0 1 2 3 4 Serum Creatinine Level (ug/ml) Figure 5. Body weight and renal function parameters in experimental model of FSGS in vivo. (A) Body weight had no changes between experimental groups of mice during the study. (B) Blood urine nitrogen (BUN) was signifi- cantly (*p<0.05, t-test) increased in the adriamycin treated group of mice (ADR) when compared to control and cyclodextrin treated only (CD) groups of mice. Cyclodextrin treatment improves the renal function of mice injected with adriamycin (ADR+CD). (C) Serum creatinine level is increased in adriamycin treated mice when compared to control, cyclodextrin only treated or adriamycin+cyclodextrin treated mcie, but no significant changes were found. A B C 0 2 4 6 8 10 0 5 10 15 20 25 Control ADR ADR+CD CD Weeks of treatment Weight (gr) Patients and data recruitment. Kidney biopsies were obtained from 54 patients with FSGS and 6 normal living donors from the NEPTUNE study, which is longitudial observational co- hort looking at individuals with nephrotic syndrome. Microarray analysis. Glomerular mRNA expression profiles of 84 related genes were studied in 54 patients with FSGS. The biopsy tissue specimens were manually microdissected as previously described [11, 12]. Glomerular gene expression profiling was performed using Human GenomeST2.1 Affymetrix Gene Chip arrays and processed using Affymetrix Power Tools. Differential expression analysis between the controls and relevant disease group was performed using Significance Analysis of Micro- array as implemented in the TIGR Multiexperiment Viewer software suite.The animal model of FSGS. 5-week-old BALB/c female mice were purchased from the Jackson Laboratory. Mice were injected with a single intravenous dosage of adriamycin (11 mg/kg) to develop FSGS-like lesions. 24 hours after adriamycin injection, osmotic pumps (Alzet, 28 days) with 2-hydroxy-propyl-β-cyclodextrin (CD) in 0.9% saline solution (40 mg/kg/day) were implanted under the skin for 10 weeks. Four experimental groups (5 animals per group) were analyzed: control, ADR only (ADR), CD only (CD), and ADR plus CD (ADR+CD). Measurements of body weight and urine collections for ACR (albumin/creatinine ratios) determinations were performed weekly. At time of sacrifice, serum creatinine and Blood Urea Nitrogen (BUN) were determined by mass spectroscopy and ELISA respectively, and perfused kidneys were collected for histological analysis. All animal procedures were conducted under protocols approved by the Institutional Animal Care and Use Committie. Histology analysis. Periodic acid-Shiff (PAS) or hematoxylin and eosin (H/E) staining of 4 micron-thick tissue sections were performed according to the standard protocols. Mesangial expansion area was de- termined as area of PAS staining. Urinary albumin and creatinine were determined as described by using mouse specific ELISA (Bethyl Lab.) and creatinine kits. Serology. Blood samples collected from mice at sacrifice were analyzed for creatinine level by mass spectro- metry at the UCSD O’Brien Core Center (University of Alabama). Blood urine nitrogen (BUN) levels were measured by ELISA in the Comparative Laboratory Core facility of the University of Miami. Statistical analysis was implemented using GraphPad Prism Software (version 5). Analysis of variance (ANOVA) followed by Bonferroni’s post-test or Student t-test was used. Lipid related genes are affected in glomeruli of patients with primary focal segmental glomerulosclerosis (FSGS) and treatment with cyclodextrin protects podocytes in experimental FSGS. 2-hydroxypropyl-beta-cyclodextrin protects podocytes in an experimental model of FSGS. As cyclodextrin was FDA approved for other indications (Niemann Pick Type C disease), it could be tested as a new therapy in pa- tients affected by FSGS. • Several lipid related genes are modulated in glomeru- li from patients with FSGS • Glomerular ApoL1 mRNA expression differentially correlates with lipid related genes in patients with two risk alleles when compared to no risk alleles • In the adriamycin mouse model of FSGS cyclodextrin treatment is associated with a significant protection from albuminuria and with a trend to reduction of BUN and serum creatinine. 1. Kitiyakara C. et al. Twenty-one-year trend in ESRD due to focal segmental glomerulo- sclerosis in the United States. Am J Kidney Dis 44, 815-25 (2004). 2. Genovese G, Friedman DJ, Ross MD, et al. Association of trypanolytic ApoL1 variants with kidney disease in African Americans. Science 329, 841-5 (2010). 3. Kim Y.H., et al. Podocyte depletion and glomerulosclerosis have a direct relationship in the PAN-treated rat. Kidney Int 60, 957-968 (2001). 4. Pagtalunan M.E., et al. Podocyte loss and progressive glomerular injury in type II dia- betes. The Journal of clinical investigation 99, 342-348 (1997). 5. Meyer T.W., et al. Podocyte number predicts long-term urinary albumin excretion in Pima Indians with Type II diabetes and microalbuminuria. Diabetologia 42, 1341-1344 (1999). 6. White K.E., et al. Podocyte number in normotensive type 1 diabetic patients with albu- minuria. Diabetes 51, 3083-3089 (2002). 7. Faul C. et al. Actin up: regulation of podocyte structure and function by components of the actin cytoskeleton. Trends Cell Biol 17, 428-437 (2007). 8. Kerjaschki D. Caught flat-footed: podocyte damage and the molecular bases of focal glomerulosclerosis. The Journal of clinical investigation 108, 1583-1587 (2001). 9. Asanuma K, Mundel P. The role of podocytes in glomerular pathobiology. Clin Exp Nephrol 7, 255-259 (2003). 10. Merscher-Gomez S., et al. Cyclodextrin protects podocytes in diabetic kidney disease. Diabetes, 62, 3817-3827 (2013). 11. Saeed A I, et al. TM4 microarray software suite. Methods Enzymol 411, 134-93 (2006). 12. Saeed AI, et al. TM4: a free, open-source system for microarray data management and analysis. Biotechniques 34, 374-8 (2003). Cholesterol Efflux Related Genes Lipid Metabolism Related Genes A B 2.16 2.04 1.9 1.75 1.74 1.65 1.64 1.54 1.37 0.47 0.44 Fold Change 2.27 2.26 2.22 1.84 1.62 1.6 1.57 1.55 1.54 1.41 1.4 1.37 Fold Change APOM APOC3 SOAT1 SREBF1 SREBF2 NPC1 CETP APOL1 ABCG1 LDLR SCD CPT1A SPHK1 ACACA CYP1B1 INSIG1 GPBAR1 FASN SMPD1 S1PRP1 S1PRP4 S1PRP2 PLIN3 0 0 Expression of Lipid Related Genes Correlated with ApoL1 Figure 2. Lipid dysmetabolism in relation to APOL1 expression. A different set of lipid related transcripts correlated with ApoL1 expression in patients carrying two risk alleles when compared to patients carrying no risk alleles. ApoL1 exprssion in glomeruli from patients with two risk alleles had primarily a positive correlation with lipid related genes, while ApoL1 expression in glomeruli from patients with no risk alleles had primarily a negative correlation with significant lipid related genes. Name Symbol P-value Association Cholesteryl Ester Transfer Protein, Plasma CETP 0.01 ATP-binding cassette, sub-family A (ABCA1), member 1 ABCA1 0.01 ATP-binding cassette, sub-family G (WHITE), member 8 ABCG8 0.01 Fatty acid synthase FASN 0.02 Niemann-Pick disease, type C2 NPC2 0.04 Apolipoprotein E APOE 0.04 Inverse Direct Name Symbol P-value Association Nuclear receptor subfamily 1, group H, member 2 NR1H2 0.02 Direct Perilipin 2 PLIN2 0 Fatty acid binding protein 1, liver FABP1 0 Lipase, endothelial LIPG 0.01 Apolipoprotein E APOE 0.01 Sterol O-acyltransferase 1 SOAT1 0.02 Acyl-CoA Oxidase 2, Branched Chain ACOX2 0.02 Apolipoprotein C-III APOC3 0.03 Sphingomyelin phosphodiesterase, acid-like 3A SMPDL3A 0.03 Perilipin 5 PLIN5 0.04 Inverse 2 APOL1 risk alleles 0 APOL1 risk alleles Cholesterol efflux related genes (specific) Lipid dysmetabolism related genes (general) Figure 1. Microarray analysis of the glomerular transcripts in patients with FSGS enrolled in the NEPTUNE cohort. (A) We observed increased expression of many cholesterol efflux related genes (specific), however expression of apolipo- protein C-III (APOC3) and apolipoprotein M (APOM) genes were decreased. SCD - stearoyl-CoA desaturase, LDLR - low density lipoprotein receptor, ABCG1 - ATP-binding cassette, sub-family G, member 1, APOL1 - apolipoprotein L1, CETP - cholesteryl ester transfer protein, NPC1 - Niemann-Pick disease, type C1, SREBF1 or SREBF2 - sterol regulatory element binding transcription factor 1 or 2, SOAT1 - sterol O-acyltransferase 1. (B) Expression of many lipid dysmetabolism related genes (general) was increased. PLIN3 - perilipin, S1PR1, S1PR2 or S1PR4 - sphingosine-1-phosphate receptor 1, 2 or 4, SMPD1 - sphingomyelin phosphodiesterase 1, acid lysosomal, FASN - fatty acid synthase, GPBAR1 - G protein-coupled bile acid receptor 1, INSIG1 - insulin induced gene 1, CYP1B1 - cytochrome P450, family 1, subfamily B, polypeptide 1, ACACA - acetyl-CoA carboxylase alpha, SPHK1 - sphingosine kinase 1, CPT1A - carnitine palmitoyltransferase 1A (liver).

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Page 1: CYCLODEXTRIN PROTECTS PODOCYTES IN FOCAL SEGMENTAL GLOMERULOSCLEROSIS (FSGS)content.stockpr.com/variantpharma/files/pages/pipeline/... · 2019-04-30 · Focal segmental glomerulosclerosis

CYCLODEXTRIN PROTECTS PODOCYTES IN FOCAL SEGMENTALGLOMERULOSCLEROSIS (FSGS)

Alla Mitrofanova1,2,3, Patricia Wahl1,2, Ximena Morales1,2, Mayrin Correa1,2, Christopher Pedigo1,2,4, Gloria-Michelle Ducasa1,2,4, George W Burke2,3, Matthias Kretzler5,6, Sebastian Martini5, Sandra Merscher1,2,4, and Alessia Fornoni1,2,4

1Division of Nephrology and Hypertension, Department of Medicine; 2Peggy and Harold Katz Family Drug Discovery Center; 3Department of Surgery; 4Department of Molecular and Cellular Pharmacology, University of Miami, Miller School of Medicine, Miami, FL; 5Department of Internal Medicine, Division of Nephrology; 6Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan

BACKGROUND

HYPOTHESIS

METHODS

SUMMARY

CONCLUSION

REFERENCES

Correspondence:Alla Mitrofanova, e-mail: [email protected]; Alessia Fornoni, e-mail: [email protected]: Peggy and Harold Katz Drug Discovery Center, Department of Medicine, University of Miami, 1580 NW 10th Ave, Batchelor Bldg, Miami, FL, 33136

Conflict of interests: S.M., A.F. and G.W.B. are inventors on pending or issued patents aimed to diagnose or treat proteinuric renal diseases. They stand to gain royaltiesfrom their future commercialization. A.F. is a consultant for Hoffman-La Roche, Boeringher Ingheleim, Abbvie, Alexion, Jannsen, Genentech, Brystol Mayer Squibb and for Mesoblast on subject matters that are unrelated to this publication. Alessia Fornoni is Vice-President and Chief Scientific Officer of L&F Health LLC.

Acknowledgments: this study is supported by US National Institute of Health (NIH, http://www.nih.gov/) (DK090316), by the Diabetes Research Institute Foundation, by the Nephcure Foundation, by the Peggy and Harold Katz Family Foundation, by the Diabetic Complications Consortium (DiaComp), by Stanley J. Glaser Foundation Research Award, by the NIH/NIDDK (5U24DX076169) and by the National Center for Advancing Translational Sciences (1UL1TR000460).

RESULTSMany Lipid Related Genes are Altered in Glomeruli Affected by FSGS Focal segmental glomerulosclerosis (FSGS) is the most common primary glomerular disease leading to

end-stage kidney disease (ESKD) due to glomerulonephritis in the US, particularly in children and young adults. Approximately 2000 individuals reach ESKD each year. The estimated life-time risk for FSGS is 0.17% in European Americans and 0.72% in African Americans [1]. Susceptibility to FSGS in African Ameri-cans is associated with genetic variants of the APOL1 gene (G1 and G2) [2]. It has become clear in the last few years that FSGS represents a heterogeneous group of diseases. The Nephrotic Syndrome Study Network (NEPTUNE) study has created a novel individualized approach to pro-file proteinuric patients using morphological and expression profiles descriptors. The NEPTUNE study has also allowed us to identify key molecular pathways that are dysregulated in clinical FSGS, thus allowing for a more clinically meaningful effort in designing related experimental studies.

The pathogenesis of FSGS is associated with podocyte injury ultimately leading to glomerulosclerosis and end-stage kidney disease [3-7]. Podocytes contribute to the glomerular filtration barrier through a tight regulation of actin cytoskeleton remodeling [8,9]. However, the mechanisms leading to podocyte injury in FSGS remain poorly understood. Glomeruli from patients with type 2 diabetes and diabetic kidney disease (DKD), where podocyte injury is an early finding and podocyte loss (podocytopenia) is an independent pre-dictor of disease progression [5], demonstrated a modulation of several genes primarily involved in choles-terol efflux. While cholesterol may play an important role in granting proper localization of slit diaphragm proteins, accumulation of cellular cholesterol may negatively affect podocyte function [10].

In support of a causative role of cellular cholesterol in the pathogenesis of podocyte injury, we have re-cently demonstrated that sequestration of cellular cholesterol with hydroxypropyl-beta cyclodextrin (CD) may protect from proteinuria in experimental DKD [10]. Whether cellular cholesterol may affect podocyte function in diseases other than DKD remains to be established. With this preliminary study, we have therefore tested the hypothesis that lipid related genes are modulated in FSGS and that CD treatment protects from experi-mental FSGS.

Cyclodextrin Protects Podocytes in Experimental FSGS in vivo

H/E

sta

inin

gPA

S st

aini

ng

Control CD Adriamycin Adriamycin + CD

Figure 3. Histological analysis (H/E and PAS) of glomeruli in experimental model of FSGS in vivo. Four experimental groups of 5-week-old BALB/c female mice were analyzed: control (n=5), 2-hydroxypropyl-beta-cyclodextrin (CD, 40 mg/kg per day) only (n=5), adriamycin only (n=5) in dosage 11 mg/kg, and adriamycin+CD (n=5). Adriamycin treated mice are characterized by significantly increased mesangial expansion, which is completely prevented after CD administration.

Figure 4. Adriamycin (ADR) administration causes albuminuria in vivo and cyclodextrin (CD) treatment protects from the development of albuminuria. Acute adriamycin administration ofBALB/c female mice inravenously results in high albuminuria over one week. Treatment with cyclo-dextrin prevents development of albuminuria in mice in 10 weeks. *p<0.05 (t-test) when comparingadriamycin + cyclodextrin (ADR+CD) group of mice to adriamycin (ADR) group of mice.

0 2 4 6 8 100

200

400

600

800

1000

Control

ADR+CDADRCD

*

Weeks of treatment

Alb/

Crea

t(ug/

mg)

Control CD ADR ADR+CD0

20

40

60 *

BU

N (m

g/dl

)

Control CD ADR ADR+CD0

1

2

3

4

Seru

m C

reat

inin

e Le

vel (

ug/m

l)Figure 5. Body weight and renal function parameters in experimental model of FSGS in vivo. (A) Body weight had no changes between experimental groups of mice during the study. (B) Blood urine nitrogen (BUN) was signifi-cantly (*p<0.05, t-test) increased in the adriamycin treated group of mice (ADR) when compared to control and cyclodextrin treated only (CD) groups of mice. Cyclodextrin treatment improves the renal function of mice injected with adriamycin (ADR+CD). (C) Serum creatinine level is increased in adriamycin treated mice when compared to control, cyclodextrin only treated or adriamycin+cyclodextrin treated mcie, but no significant changes were found.

A B C

0 2 4 6 8 100

5

10

15

20

25Control

ADRADR+CD

CD

Weeks of treatment

Wei

ght (

gr)

Patients and data recruitment. Kidney biopsies were obtained from 54 patients with FSGS and 6 normal living donors from the NEPTUNE study, which is longitudial observational co-hort looking at individuals with nephrotic syndrome. Microarray analysis. Glomerular mRNA expression profiles of 84 related genes were studied in 54 patients with FSGS. The biopsy tissue specimens were manually microdissected as previously described [11, 12]. Glomerular gene expression profiling was performed using Human GenomeST2.1 Affymetrix Gene Chip arrays and processed using Affymetrix Power Tools. Differential expression analysis between the controls and relevant disease group was performed using Significance Analysis of Micro-array as implemented in the TIGR Multiexperiment Viewer software suite.The animal model of FSGS. 5-week-old BALB/c female mice were purchased from the Jackson Laboratory. Mice were injected with a single intravenous dosage of adriamycin (11 mg/kg) to develop FSGS-like lesions. 24 hours after adriamycin injection, osmotic pumps (Alzet, 28 days) with 2-hydroxy-propyl-β-cyclodextrin (CD) in 0.9% saline solution (40 mg/kg/day) were implanted under the skin for 10 weeks. Four experimental groups (5 animals per group) were analyzed: control, ADR only (ADR), CD only (CD), and ADR plus CD (ADR+CD). Measurements of body weight and urine collections for ACR (albumin/creatinine ratios) determinations were performed weekly. At time of sacrifice, serum creatinine and Blood Urea Nitrogen (BUN) were determined by mass spectroscopy and ELISA respectively, and perfused kidneys were collected for histological analysis. All animal procedures were conducted under protocols approved by the Institutional Animal Care and Use Committie. Histology analysis. Periodic acid-Shiff (PAS) or hematoxylin and eosin (H/E) staining of 4 micron-thick tissue sections were performed according to the standard protocols. Mesangial expansion area was de-termined as area of PAS staining. Urinary albumin and creatinine were determined as described by using mouse specific ELISA (Bethyl Lab.) and creatinine kits. Serology. Blood samples collected from mice at sacrifice were analyzed for creatinine level by mass spectro-metry at the UCSD O’Brien Core Center (University of Alabama). Blood urine nitrogen (BUN)levels were measured by ELISA in the Comparative Laboratory Core facility of the University of Miami. Statistical analysis was implemented using GraphPad Prism Software (version 5). Analysis of variance (ANOVA) followed by Bonferroni’s post-test or Student t-test was used.

Lipid related genes are affected in glomeruli of patients with primary focal segmental glomerulosclerosis (FSGS) and treatment with cyclodextrin protects podocytes in experimental FSGS.

2-hydroxypropyl-beta-cyclodextrin protects podocytes in an experimental model of FSGS. As cyclodextrin was FDA approved for other indications (Niemann Pick Type C disease), it could be tested as a new therapy in pa-tients affected by FSGS.

• Several lipid related genes are modulated in glomeru-li from patients with FSGS

• Glomerular ApoL1 mRNA expression differentially correlates with lipid related genes in patients with two risk alleles when compared to no risk alleles

• In the adriamycin mouse model of FSGS cyclodextrin treatment is associated with a significant protection from albuminuria and with a trend to reduction of BUN and serum creatinine.

1. Kitiyakara C. et al. Twenty-one-year trend in ESRD due to focal segmental glomerulo-sclerosis in the United States. Am J Kidney Dis 44, 815-25 (2004).2. Genovese G, Friedman DJ, Ross MD, et al. Association of trypanolytic ApoL1 variantswith kidney disease in African Americans. Science 329, 841-5 (2010).3. Kim Y.H., et al. Podocyte depletion and glomerulosclerosis have a direct relationship in the PAN-treated rat. Kidney Int 60, 957-968 (2001).4. Pagtalunan M.E., et al. Podocyte loss and progressive glomerular injury in type II dia-betes. The Journal of clinical investigation 99, 342-348 (1997).5. Meyer T.W., et al. Podocyte number predicts long-term urinary albumin excretion in Pima Indians with Type II diabetes and microalbuminuria. Diabetologia 42, 1341-1344 (1999).6. White K.E., et al. Podocyte number in normotensive type 1 diabetic patients with albu-minuria. Diabetes 51, 3083-3089 (2002).7. Faul C. et al. Actin up: regulation of podocyte structure and function by components of the actin cytoskeleton. Trends Cell Biol 17, 428-437 (2007).8. Kerjaschki D. Caught flat-footed: podocyte damage and the molecular bases of focal glomerulosclerosis. The Journal of clinical investigation 108, 1583-1587 (2001).9. Asanuma K, Mundel P. The role of podocytes in glomerular pathobiology. Clin Exp Nephrol 7, 255-259 (2003).10. Merscher-Gomez S., et al. Cyclodextrin protects podocytes in diabetic kidney disease. Diabetes, 62, 3817-3827 (2013).11. Saeed A I, et al. TM4 microarray software suite. Methods Enzymol 411, 134-93 (2006).12. Saeed AI, et al. TM4: a free, open-source system for microarray data management and analysis. Biotechniques 34, 374-8 (2003).

Cholesterol Efflux Related Genes Lipid Metabolism Related GenesA B

2.162.04

1.91.751.74

1.651.64

1.541.37

0.470.44

Fold Change

2.272.26

2.221.84

1.621.6

1.571.551.54

1.411.4

1.37

Fold Change

APOMAPOC3SOAT1SREBF1SREBF2NPC1CETPAPOL1ABCG1LDLRSCD

CPT1ASPHK1ACACACYP1B1INSIG1GPBAR1FASNSMPD1S1PRP1S1PRP4S1PRP2PLIN3

0 0

Expression of Lipid Related Genes Correlated with ApoL1

Figure 2. Lipid dysmetabolism in relation to APOL1 expression. A different set of lipid relatedtranscripts correlated with ApoL1 expression in patients carrying two risk alleles when compared to patients carrying no risk alleles. ApoL1 exprssion in glomeruli from patients with two risk alleleshad primarily a positive correlation with lipid related genes, while ApoL1 expression in glomeruli from patients with no risk alleles had primarily a negative correlation with significant lipid related genes.

Name Symbol P-value AssociationCholesteryl Ester Transfer Protein, Plasma CETP 0.01ATP-binding cassette, sub-family A (ABCA1), member 1 ABCA1 0.01ATP-binding cassette, sub-family G (WHITE), member 8 ABCG8 0.01Fatty acid synthase FASN 0.02Niemann-Pick disease, type C2 NPC2 0.04Apolipoprotein E APOE 0.04 Inverse

Direct

Name Symbol P-value AssociationNuclear receptor subfamily 1, group H, member 2 NR1H2 0.02 DirectPerilipin 2 PLIN2 0Fatty acid binding protein 1, liver FABP1 0Lipase, endothelial LIPG 0.01Apolipoprotein E APOE 0.01Sterol O-acyltransferase 1 SOAT1 0.02Acyl-CoA Oxidase 2, Branched Chain ACOX2 0.02Apolipoprotein C-III APOC3 0.03Sphingomyelin phosphodiesterase, acid-like 3A SMPDL3A 0.03Perilipin 5 PLIN5 0.04

Inverse

2 APOL1 risk alleles

0 APOL1 risk alleles

Cholesterol efflux related genes (specific) Lipid dysmetabolism related genes (general)

Figure 1. Microarray analysis of the glomerular transcripts in patients with FSGS enrolled in the NEPTUNE cohort. (A) We observed increased expression of many cholesterol efflux related genes (specific), however expression of apolipo-protein C-III (APOC3) and apolipoprotein M (APOM) genes were decreased. SCD - stearoyl-CoA desaturase, LDLR - lowdensity lipoprotein receptor, ABCG1 - ATP-binding cassette, sub-family G, member 1, APOL1 - apolipoprotein L1, CETP - cholesteryl ester transfer protein, NPC1 - Niemann-Pick disease, type C1, SREBF1 or SREBF2 - sterol regulatory element binding transcription factor 1 or 2, SOAT1 - sterol O-acyltransferase 1. (B) Expression of many lipid dysmetabolism related genes (general) was increased. PLIN3 - perilipin, S1PR1, S1PR2 or S1PR4 - sphingosine-1-phosphate receptor 1, 2 or 4, SMPD1 - sphingomyelin phosphodiesterase 1, acid lysosomal, FASN - fatty acid synthase, GPBAR1 - G protein-coupled bile acid receptor 1, INSIG1 - insulin induced gene 1, CYP1B1 - cytochrome P450, family 1, subfamily B, polypeptide 1, ACACA - acetyl-CoA carboxylase alpha, SPHK1 - sphingosine kinase 1, CPT1A - carnitine palmitoyltransferase 1A (liver).