54
Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Embed Size (px)

Citation preview

Page 1: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

Genomics, Bioinformatics, and Proteomics

Chapter 21 Lecture

Concepts of GeneticsTenth Edition

Page 2: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.1 Whole-Genome Shotgun Sequencing Is a Widely Used Method for Sequencing and Assembling Entire Genomes

Page 3: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.1

Page 4: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.1 Whole-Genome Shotgun Sequencing Is a Widely Used Method for Sequencing and Assembling Entire Genomes

21.1.1 High-Throughput Sequencing

Page 5: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.2

Page 6: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.1 Whole-Genome Shotgun Sequencing Is a Widely Used Method for Sequencing and Assembling Entire Genomes

21.1.2 The Clone-by-Clone Approach

21.1.3 Draft Sequences and Checking for Errors

Page 7: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.3

Page 8: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.2 DNA Sequence Analysis Relies on Bioinformatics Applications and Genome Databases

21.2.1 Annotation to Identify Gene Sequences

21.2.2 Hallmark Characteristics of a Gene Sequence Can Be Recognized During Annotation

Page 9: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.4

Page 10: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.5

Page 11: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.6a

Page 12: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.6b

Page 13: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.6c

Page 14: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.7

Page 15: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.3 Functional Genomics Attempts to Identify Potential Functions of Genes and Other Elements in a Genome

21.3.1 Predicting Gene and Protein Functions by Sequence Analysis

Page 16: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.8

Page 17: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.9

Page 18: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.3 Functional Genomics Attempts to Identify Potential Functions of Genes and Other Elements in a Genome

21.3.2 Predicting Function from Structural Analysis of Protein Domains and Motifs

Page 19: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.4 The Human Genome Project Revealed Many Important Aspects of Genome Organization in Humans

21.4.1 Origins of the Project

21.4.2 Major Features of the Human Genome

Page 20: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

Page 21: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

© 2012 Pearson Education, Inc. Table 21.1

Page 22: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

© 2012 Pearson Education, Inc. Table 21.1

Page 23: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

Page 24: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.11

Page 25: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.12a

Page 26: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.12b

Page 27: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.5 The “Omics” Revolution Has Created a New Era of Biological Research Methods

Page 28: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

© 2012 Pearson Education, Inc. Figure 21.13

Page 29: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

© 2012 Pearson Education, Inc.

Personal Genomics

The Human Microbiome Project

No Genome Left Behind—10K genomes in 5 years

Page 30: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.6 Comparative Genomics Analyzes and Compares Genomes from Different Organisms

Page 31: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Table 21.2

Page 32: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Table 21.3

Page 33: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.12

Page 34: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

© 2012 Pearson Education, Inc. Table 21.3

Page 35: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.Figure 20-8 Copyright © 2006 Pearson Prentice Hall, Inc.

Page 36: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.15

Page 37: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Table 21.4

Page 38: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.6 Comparative Genomics Analyzes and Compares Genomes from Different Organisms

The Rhesus Monkey Genome

The Sea Urchin Genome

The Neanderthal Genome

Evolution of Multigene Families

Page 39: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.16

Page 40: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.17

Page 41: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.18

Page 42: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.8 Transcriptome Analysis Reveals Profiles of Expressed Genes in Cells and Tissues

Page 43: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.21

Page 44: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.22

Page 45: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.22a

Page 46: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.22b

Page 47: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.9 Proteomics Identifies and Analyzes the Protein Composition of Cells

Reconciling the Number of Genes and the Number of Proteins Expressed by a Cell or Tissue

Proteomics Technologies: Two-Dimensional Gel Electrophoresis for Separating Proteins

Page 48: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.24

Page 49: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.25

Page 50: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.9 Proteomics Identifies and Analyzes the Protein Composition of Cells

Proteomics Technologies: Mass Spectrometry for Protein Identification

Page 51: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.26

Page 52: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc. Figure 21.27

Page 53: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

Copyright © 2009 Pearson Education, Inc.

21.10 Systems Biology Is an Integrated Approach to Studying Interactions of All Components of an Organism’s Cells

Page 54: Copyright © 2009 Pearson Education, Inc. Genomics, Bioinformatics, and Proteomics Chapter 21 Lecture Concepts of Genetics Tenth Edition

© 2012 Pearson Education, Inc. Figure 21.29