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Contents of Previous Volumes
VOLUME 1
Chapter 1
NMR of Sodium-23 and Potassium-39 in Biological Systems
Mortimer M. Civan and Mordechai Shporer
Chapter 2
High-Resolution NMR Studies of Histones
C. Crane-Robinson
Chapter 3
PMR Studies of Secondary and Tertiary Structure of Transfer RNA in Solution
Philip H. Bolton and David R. Kearns
Chapter 4
Fluorine Magnetic Resonance in Biochemistry
J. T. Gerig
Chapter 5
ESR of Free Radicals in Enzymatic Systems
Dale E. Edmondson
385
386 Contents of Previous Volumes
Chapter 6
Paramagnetic Intermediates in Photosynthetic Systems
Joseph T. Warden
Chapter 7
ESR of Copper in Biological Systems
John F. Boas, John R. Pilbrow, and Thomas D. Smith
Index
VOLUME 2
Chapter 1
Phosphorus NMR of Cells, Tissues, and Organelles
Donald P. Hollis
Chapter 2
EPR of Molybdenum-Containing Enzymes
Robert C. Bray
Chapter 3
ESR of Iron Proteins
Thomas D. Smith and John R. Pilbrow
Chapter 4
Stable Imidazoline Nitroxides
Leonid B. Volodarsky, Igor A. Grigor' ev, and Renad Z. Sagdeev
Chapter 5
The Multinuclear NMR Approach to Peptides: Structures, Conformation, and Dynamics
Roxanne Deslauriers and Ian C. P. Smith
Index
Contents of Previous Volumes
VOLUME 3
Chapter 1
Multiple Irradiation IH NMR Experiments with Hemoproteins
Regula M. Keller and Kurt Wuthrich
Chapter 2
Vanadyl(IV) EPR Spin Probes: Inorganic and Biochemical Aspects
N. Dennis Chasteen
Chapter 3
ESR Studies of Calcium- and Protein-Induced Photon Separations in Phosphatidylserine-Phosphatidylcholine Mixed Membranes
Shun-ichi Ohnishi and Satoru Tokutomi
Chapter 4
EPR Crystallography of Metalloproteins and Spin-Labeled Enzymes
James C. W. Chien and L. Charles Dickinson
Chapter 5
Electron Spin Echo Spectroscopy and the Study of Metalloproteins
W. B. Mims and J. Peisach
Index
VOLUME 4
Chapter 1
Spin Labeling in Disease
D. Allan Butterfield
Chapter 2
Principles and Applications of 113Cd NMR to Biological Systems
Ian M. Armitage and James D. Otvos
387
388
Chapter 3
Photo-CIDNP Studies of Proteins
Robert Kaptein
Chapter 4
Contents of Previous Volumes
Application of Ring Current Calculations to the Proton NMR of Proteins and Transfer RNA
Stephen J. Perkins
Index
VOLUME 5
Chapter 1
CMR as a Probe for Metabolic Pathways in Vivo
R. L. Baxter, N. E. Mackenzie, and A. 1. Scott
Chapter 2
Nitrogen-IS NMR in Biological Systems
Felix Blomberg and Heinz Ruterjans
Chapter 3
Phosphorus-31 Nuclear Magnetic Resonance Investigations of Enzyme Systems
B. D. Nageswara Rao
Chapter 4
NMR Methods Involving Oxygen Isotopes in Biophosphates
Ming-Daw Tsai and Larol Bruzik
Chapter 5
ESR and NMR Studies of Lipid-Protein Interactions in Membranes
Philippe F. Devaux
Index
Contents of Previous Volumes
VOLUME 6
Chapter 1
Two-Dimensional Spectroscopy as a Conformational Probe of Cellular Phosphates
Philip H. Bolton
Chapter 2
Lanthanide Complexes of Peptides and Proteins
Robert E. Lenkinski
Chapter 3
EPR of Mn(II) Complexes with Enzymes and Other Proteins
George H. Reed and George D. Markham
Chapter 4
Biological Applications of Time Domain ESR
Hans Thomann, Larry R. Dalton, and Lauraine A. Dalton
Chapter 5
Techniques, Theory, and Biological Applications of Optically Detected Magnetic Resonance (ODMR)
August H. Maki
Index
VOLUME 7
Chapter 1
NMR Spectroscopy of the Intact Heart
Gabriel A. Elgavish
Chapter 2
NMR Methods for Studying Enzyme Kinetics in Cells and Tissue
K. M. Brindle, 1. D. Campbell, and R. 1. Simpson
389
390 Contents of Previous Volnmes
Chapter 3
Endor Spectroscopy in Photobiology and Biochemistry
Klaus Mobius and Wolfgang Lubitz
Chapter 4
NMR Studies of Calcium-Binding Proteins
Hans 1. Vogel and Sture Forsen
Index
VOLUME 8
Chapter 1
Calculating Slow Motional Magnetic Resonance Spectra: A User's Guide
David 1. Schneider and Jack H. Freed
Chapter 2
Inhomogeneously Broadened Spin-Label Spectra
Barney Bales
Chapter 3
Saturation Transfer Spectroscopy of Spin Labels: Techniques and Interpretation of Spectra
M. A. Hemminga and P. A. de Jager
Chapter 4
Nitrogen-IS and Deuterium Substituted Spin Labels for Studies of Very Slow Rotational Motion
Albert H. Beth and Bruce H. Robinson
Chapter 5
Experimental Methods in Spin-Label Spectral Analysis
Derek Marsh
Contents of Previous Volumes
Chapter 6
Electron-Electron Double Resonance
James S. Hyde and Jim B. Feix
Chapter 7
Resolved Electron-Electron Spin-Spin Splittings in EPR Spectra
Gareth R. Eaton and Sandra S. Eaton
Chapter 8
Spin-Label Oximetry
James S. Hyde and Witold K. Subczynski
Chapter 9
391
Chemistry of Spin-Labeled Amino Acids and Peptides: Some New Mono- and Bifunctionalized Nitroxide Free Radicals
Kalman Hideg and Olga H. Hankovsky
Chapter 10
Nitroxide Radical Adducts in Biology: Chemistry, Applications, and Pitfalls
Carolyn Mottley and Ronald P. Mason
Chapter 11
Advantages of 15N and Deuterium Spin Probes for Biomedical Electron Paramagnetic Resonance Investigations
Jane H. Park and Wolfgang E. Trommer
Chapter 12
Magnetic Resonance Study of the Combining Site Structure of a Monoclonal Anti-Spin-Label Antibody
Jacob Anglister
392 Contents of Previous Volumes
Appendix
Approaches to the Chemical Synthesis of 15N and Deuterium Substituted Spin Labels
Jane H. Park and Wolfgang E. Trommer
Index
VOLUME 9
Chapter 1
Phosphorus NMR of Membranes
Philip L. Yeagle
Chapter 2
Investigation of Ribosomal 5S Ribonucleic Acid Solution Structure and Dynamics by Means of High-Resolution Nuclear Magnetic Resonance Spectroscopy
Alan G. Marshall and Jiejun Wu
Chapter 3
Structure Determination via Complete Relaxation Matrix Analysis (CORMA) of Two-Dimensional Nuclear Overhauser Effect Spectra: DNA Fragments
Brandan A. Borgias and Thomas L. James
Chapter 4
Methods of Proton Resonance Assignment for Proteins
Andrew D. Robertson and John L. Markley
Chapter 5
Solid-State NMR Spectroscopy of Proteins
Stanley 1. Opella
Contents of Previous Volumes 393
Chapter 6
Methods for Suppression of the H20 Signal in Proton Ff INMR Spectroscopy: A Review
Joseph E. Meier and Alan G. Marshall
Index
VOLUME 10
Chapter 1
High-Resolution IH-Nuclear Magnetic Resonance Spectroscopy of Oligosaccharide-Alditols Released from Mucin-Type O-Glycoproteins
Johannis P. Kamerling and Johannes F. G. Vliegenthart
Chapter 2
NMR Studies of Nucleic Acids and Their Complexes
David E. Wemmer
Index
VOLUME 11
Chapter 1
Localization in Clinical NMR Spectroscopy
Lizann Bolinger and Robert E. Lenkinski
Chapter 2
Off-Resonance Rotating Frame Spin-Lattice Relaxation: Theory, and in Vivo MRS and MRI Applications
Thomas Schleich, G. Herbert Caines, and Jan M. Rydzewski
Chapter 3
NMR Methods in Studies of Brain Ischemia
Lee-Hong Chang and Thomas L. James
394 Contents of Previous Volumes
Chapter 4
Shift-Reagent-Aided 23Na NMR Spectroscopy in Cellular, Tissue, and Whole-Organ Systems
Sandra K. Miller and Gabriel A. Elgavish
Chapter 5
In Vivo 19F NMR
Barry S. Selinski and C. Tyler Burt
Chapter 6
In Vivo 2H NMR Studies of Cellular Metabolism
Robert E. London
Chapter 7
Some Applications of ESR to in Vivo Animal Studies and EPR Imaging
Lawrence J. Berliner and Hirotada Fujii
Index
VOLUME 12
Chapter 1
NMR Methodology for Paramagnetic Proteins
Gerd N. La Mar and Jeffrey S. de Ropp
Chapter 2
Nuclear Relaxation in Paramagnetic Metalloproteins
Lucia Banci
Chapter 3
Paramagnetic Relaxation of Water Protons
Cathy Coolbaugh Lester and Robert G. Bryant
Contents of Previous Volumes
Chapter 4
Proton NMR Spectroscopy of Model Hemes
F. Ann Walker and Ursula Simonis
Chapter 5
Proton NMR Studies of Selected Paramagnetic Heme Proteins
J. D. Satterlee, S. Alam, Q. Yi, J. E. Erman, I. Constantinidis, D. J. Russell, and S. J. Moench
Chapter 6
395
Heteronuclear Magnetic Resonance: Applications to Biological and Related Paramagnetic Molecules
Joel Mispelter, Michel Momenteau, and Jean-Marc Lhoste
Chapter 7
NMR of Polymetallic Systems in Proteins
Claudio Luchinat and Stefano Ciurli
Index
Index
Aconitase, 72, 183-195 Actin, 329-330, 333-334 Active sites, 275 Albumin (BSA), 126, 128-129, 134 Amide nitrogen, 318 Anisotropic hyperfine interaction, 283 Axial symmetry, 17, 36, 224 Azide substituted SOD, 246 Azurin, 129-130, 145, 165-171,278
Benzosemiquinone anion radical, 255 Bleomycin, 136 Blind spots, 289, 296-297 Blue copper proteins, 164-171 Bovine SOD, 247
Caged ATP, 326-329 Caged compounds, 325-329 Calcium ATPase, 340-347 Cancellation effects, 311, 313 Cobalt-myoglobin, 241 Cobalt-porphyrin complexes, 237 Cobaltous hemoglobin, 237 Coherence transfer, 286, 307 Combination frequencies, 313-314 Continuous wave, 277, 305 Continuous-wave (CW) ENDOR, 160-162 Contractile proteins, 329-339 Copper complexes, blue, 105-107, 121,
129-131,277-278 Copper complexes, square planar, 105-107,
113, 125-126, 129-131, 139 Copper ENDOR, 305, 307-309 Copper tetraimidazole complex, 243-246 Copper thiosemicarbazones, 134-136
Copper (11) bis(diisopropylsalicilate), 137 Correlation times, 109-110, 112, 132-133,
136 Cross-relaxation, 283, 306 Crystal field, 11 Cyanide binding, 248 Cytochrome c oxidase, 130-132 Cyotchrome c peroxidase, 195-196 Cytochrome P-450, 80
Deoxyhemoglobin models, 239 Deuterium ENDOR, 175, 190-193 Deuterium exchange, 174 Di-p-anisyl-nitroxide (DANO), 263 Di-I-butyl nitroxide, 355-358 Dioxygen adducts, 84 Dioxygen ligand, 240 Distant ENDOR, 154 Distributed spin-density, 223 Dithiocarbamate, 132 DMPOX, 370 Doppler shift, second order, 61 Dynamic line-shape model, 76 Dynamic shift, 110, 112, 114, 132, 147
Effective g-value, 4 Electron spin echo (ESE) ENDOR, 162-164 Electron spin echo envelope modulation
(ESEEM), 243 EMR of crystals, 37 ENDOR amplitudes, 302-305,309-310,313 ENDOR analysis, 199-214 ENDOR at Wband, 257 ENDOR enhancement, 299, 306 ENDOR experiment, 152, 154-164
397
398
ENDOR frequencies, theory, 200-208 ENDOR frequency, 276, 281-284 ENDOR spectra, simulation of, 209-213 Ene-addition, 370 Energy levels, 12,27 EPR selection, 153 EPR spectrometer at Wband, 260 EPR, theory, 199-200 ESEEM frequency, 276, 302 Excitation bandwidth, 292-295, 302-305,
310
Fast fluctuation limit, 68 Fenton reaction, 356, 374 Ferric ion, 370 Ferryl hemeproteins, 75, 78 Field-swept linewidth, 28 Fine structure, 7 Flash photolysis, 326-327, 333, 336-338,
342, 344 Fluidity of lipids, 341 Four-level model, II Frequency-swept linewidth, 28
Galactose oxidase, 197-198 Gas chromatography, 363 Glutathione peroxidase, 373
Hemeproteins, I, 75-84 Hemoglobin, 35 Hemoglobin, structure-function relationship,
229 High-spin ferric, I Hole burning, 291-292, 316 Horseradish peroxidase, 76 Horseradish peroxidase, compound I, 78 HPLC, 359, 363, 370 Hydrogen bonds, 175 Hydrogenase, 277, 280, 298, 311 Hydroxylamine, 357, 365, 370, 376, 377 Hyperfine contrast selectivity, 294, 296, 307,
310,315 Hyperfine enhancement, 290, 296, 298-302,
317 Hyperfine interaction, 275, 276, 278 Hyperfine selective ENDOR, 164,316-318 Hyperfine tensor, 159
Imidazole nitrogen, 295, 307, 317 Indanedione spin label, 328, 342 Indirect detection, 290
Index
Inhomogeneous broadening, 275, 276, 311 Iodoacetamide spin label, 328, 334-336,
338-339, 343-347 Iron chelation, 367, 370, 371, 376 Iron, 2 Iron, adventitious, 372, 374, 375 Iron-57 electric quadrupole interaction, 62 Iron-57 ENDOR, 185-1897 Iron-57 hyperfine interactions, 61 Iron-57 isomer shift, 62 Iron-57 magnetic dipole interaction, 62 Iron-57-radical coupling, 76, 78, 85, 96 Iron-containing proteins, I Iron-hydrogenase, 171-172 Iron-sulfur clusters, 171-195 Iron-sulfur enzyme, 277, 311 Iron-sulfur proteins, 67-74 Isopenicillin N synthase, 90-92 Isotopic exchange, 64, 72 Isotopically labeled proteins, 176-182 Isotropic hyperfine interaction, 281
L-band EPR, 48 Laccase, 129-131, 134, 165-170 Lactoferrin, 37 Laser photolysis: see Flash photolysis Line broadening in EPR, 255 Line shape, 28 Lipid spin labels, 328, 341 Lipoxygenase, 4, 50 Local ENDOR, 155-160 Longitudinal magnetization, 289-290 Longitudinal relaxation from spin-state
fluctuations, 78 Loop-gap resonators, 117, 132
Maleimide spin label, 328, 332-334, 336-338, 342-343
Mass spectrometry, 359, 363, 370 Matrix ENDOR, 155 Metal-ion ligand complex, 221 Metalloenzyme, 275, 276 Metalloenzyme active site, 153 Metalloprotein, 275, 276 Methemoglobin, I Metmyoglobin, 1,35 Mixing pulse, 289 Molecular dynamics, 323 Motional resolution, 328, 334-336, 338-339,
343-347 Multifrequency EPR, 107
Index
Muscle contraction, 329-339 Myeloperoxidase, 373 Myoglobin, 183 Myosin, 329-339
Nafion/Cu, 139 Nitrogen superhyperfine structure, 105, 127 Nitrogen-14 ENDOR, 182,228 Nitrogen-14 hyperfine coupling, 240 Nitrogen-14 hyperfine coupling constants,
167 Nitrogen-14 quadrupole tensors, 182 Nitrogen-I 5 hyperfine tensors, 180-182 Nitrous oxide reductase, 131-132 Nitroxide radicals, 258 NO-heme complexes, 230 Nuclear hyperfine interaction, 156 Nuclear modulation effect, 279, 302, 304,
311-314 Nuclear quadrupole frequencies, 284, 311 Nuclear quadrupole splitting, 284 Nuclear spin alignment, 289 Nutation angie, 289, 298-301, 310
Orientation selection, 159 Orientation selectivity, 285, 303, 312-313 Orientation-dependent spectra, 2 Orientational resolution, 328, 336-338 Oxy-complexes, 240 Oxygen-17 ENDOR, 190-194 Oxygen-bridged dinuclear clusters, 92-98
Partial excitation effects, 303-304 Passage effects, 309-310 Peroxide radicals, 258 Phenylalanine hydrolase, 4, 45 Phenylalanine hydroxylase, 119-120 Phorbol myristate acetate, 373, 374, 377 Photosynthesis reaction centers, 85-88, 266 Photosystem II, 196-197 Phthalate dioxygenase, 176-183 Phyllosemiquinone anion radical, 264 Plastocyanin, 165-170 Polarization displacement, 293, 296 Polarization transfer, 162, 283, 286, 299, 306 POSHE,164 Power broadening, 286, 287, 307, 311 Preparation pulse, 287-288 Protein crystals, I Protocatechuate dixoygenase, 83-90 Proton ENDOR, 222
Proton hyperfine coupling constants, 167 Pulse periods, 287 Purple acid phosphatase, 93-96 Putidaredoxin, 70
Q-band ENDOR, 157, 165-168 Quadrupole coupling, 157
Rabi oscillations, 299-301 Rapid passage, 52 Recoilless fraction, 60 Relaxation rates, 277, 305, 306, 309 Rhombic coordinate system, 7 Rhombic distortion, 10
399
Rhombic symmetry, 19,38,225 Ribonucleotide reductase, 96-98, 196-197 Rieske iron-sulfur centers, 176-183 Rubredoxin, 68
Sband,48, 125-126, 128-129, 131-132, 134, 136-138, 146
Saturation hole, 292-293, 296, 310, 316 Saturation transfer, 328, 332-334, 342-343 Second harmonic, 52 Second-order shifts, 109-110, 132, 147 Selection rules, 281-282 Selective detection, 290 Selective excitation, 284, 288, 291, 306, 309 Self-ENDOR, 164 Semiforbidden EPR transitions, 276, 302-
305,319 Sensitivity analysis, 122-123 Signal averaging, 119 Single-crystal EMR, 2 Site specificity, 153 SOD, structure function relationship, 242 Solvent effect, 363 Spectral diffusion, 292, 309-310 Spin-echo, 278-280 Spin Hamiltonian, 6, 63, 220 Spin Hamiltonian, diagonalization, 66 Spin Hamiltonian, limit of applicability, 88 Spin labels, 324, 328, 332-347 Spin-orbit interaction, 8 Spin-spin interactions, 64 Spin-state fluctuations, 61 Spin-trap adduct quantitation, 364 Spin-trap extraction, 356, 357, 363, 364 Spin-trap radical adducts
alkoxyl, 368 CCl., 356, 363
400
Spin-trap radical adducts (Cont.) CCI)02' , 356, 365 cumene hydroperoxide, 358 ethanol, 366, 371, 375 linoleic acid, 367 lipoprotein, 366 nitric oxides, 360 paraquat, 367 peroxyl, 364, 368 phenelzine, 366 procarbazine, 366 sulfur trioxide anion, 361 t-butyl hydroperoxide, 357, 359
Spin-trap systemic effects anoxia, 368 cardiovascular, 358, 365, 366 cerebral ischemia, 365 ischemia-reperfusion, 378 vasodilation, 368
Stellacyanin, 165-169,277-278,294,297, 299,304,307-308,317,319
Stochastic Liouville equation, 112 Strong coupling limit, 65 Sublevel free induction, 311 Sublevel polarization, 281, 288-289, 306 Subspectra, 318-320
Substrate binding, 192-194 Sulfur-33 ENDOR, 187-190 Superoxide dismutase (SOD), 242
t-butyl hydroaminoxyl, 365 t-butyl hydronitroxide, 375 Tertiary structural transition, 235 Tetragonal distortion, 10
Index
Thiolate methylene protons, 295-296, 301, 304, 307
Time-resolved EPR: see Transient EPR Transferrin, 4, 37,126 Transient ENDOR, 161 Transient EPR, 323-351 Transient nutations, 300-301 Transition dipole, 16 Transition probability, 16,27 Two-level systems, 288-289 Tyrosine radicals, 196-198
W-band EPR, 255
X-band ENDOR, 157 X-ray structure, 6
Zero-field limit, 12, 16 Zymosan,373,377
