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May 2015 The National Ribat University Faculty of Graduate studies & Scientific Research Anti-Mycetoma, anti-oxidant and Phytochemical Screening of Nigella sativa seeds A Thesis Submitted for Fulfillment of the Requirements of Master Degree in pharmacy ( pharmacognosy ) By: Rania Mubarak Awad Obaid Supervisor: Prof. Yahia Mohamed Ahmed El-Imam

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Page 1: Anti-Mycetoma, anti-oxidant and Phytochemical Screening of … · 2015. 7. 14. · Anti-Mycetoma, anti-oxidant and Phytochemical Screening of Nigella sativa seeds A Thesis Submitted

May 2015

The National Ribat University

Faculty of Graduate studies & Scientific Research

Anti-Mycetoma, anti-oxidant and Phytochemical

Screening of Nigella sativa seeds

A Thesis Submitted for Fulfillment of the Requirements of Master Degree

in pharmacy ( pharmacognosy )

By: Rania Mubarak Awad Obaid

Supervisor: Prof. Yahia Mohamed Ahmed El-Imam

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May 2015

كال ثعالى :

ذا ىوى﴿ ن ىو ۞وماينطق عن اليوى۞ماضل صاحبكم وماغوى۞ والنجم ا لاا وحي ا

﴾علمو شديد اللوى۞يوحى

صدق الله العظيم

"(5،4،3،2،1" ت)سورة النجم ،الآيا

عن خالد بن سعيد كال، خرجنا و معنا غالب بن أ بجر فمرض في الطريق،

فلدمنا المدينة و ىو مريض، فعاده ابن أ بي عتيق فلال لنا:

" عليكم بهذه الحبيبة السوداء فخذوا منها خمسا أ و س بعا فاسحلوىا، ثم اكطروا في أ هفو

ن عائشة أ م المؤمنين حدثتني أ نها بلطرات زيت في ىذا الجاهب و في ىذا الجاهب فا

:سمعت النبي صلى الله عليو و سلم يلول

ن ى لا السام، كلت و ما السام؟ كال: الموت) ا (ذه الحبة السوداء شفاء من كل داء ا

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May 2015

أ خرجو البخاري

Dedication

I dedicate this research to

my family, my supervisor, friends

and all those who helped me to

complete this research………

إىى مه أحمو اسمه تنو إفتخاس )مثاسك عىض عثذ( مه عيمى اىعطاء تذون إوتظاس مه عيمى اىثقح

واىصثش إىى اىىىس اىزي ىش دسب اىىجاح

اىعزز.... إىى أت

مه مان دعائها سش وجاح (إىى معىى اىحة واىحىان واىتفاو إىى تسمح اىحاج) خضشج خيو اىسس

وحىاوها تيسم جشاح إىى اىشمعح اىت تحتشق ىتىش حات

إىى أم اىعززج.......

عثذ( إىى محة اىعيم واىتعيم عثمان وإىى مه إحتاسخ اىنيماخ مارا تقىه ىه وتأي إسم تىادح )عثذ

أتعث ىل مو اىشنش واىتقذش

إىى عم اىعزز.....

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May 2015

TABLE OF CONTENTS

Chapter

No.

Particulars Page

No.

Acknowledgements i English abstract ii Arabic abstract iv

Chapter

one

INTRODUCTION & LITERATURE REVIEW 1.1 Introductions 1-2 1.2. Rational /Justification 3 1.3. Objective 3 1.4. literature review 4-60 1.4.1 Nigella sativa 4

1.4.1.1 History 4 1.4.1.2 Nigella sativa in Islam 5 1.4.1.3 Names &Etymology 5 1.4.1.4 Scientific classification 7 1.4.1.5 Origin 7 1.4.1.6 Characteristics 7 1.4.1.7 Species of N.sativa 8 1.4.1.8 Morphology and Description of N. Sativa 9 1.4.1.9 Description of oil of Nigella sativa 9 1.4.1.10 Nigella sativa at different stages of

growth 10-11

1.4.1.11 Chemical Constituents 12-13 1.4.1.12 Commercial Nigella oil 16 1.4.1.13 Adulterations 16 1.4.1.14 Roles of Nigella sativa constituents 17 1.4.1.14.1Thymoquinone 17 1.4.1.14.2 p- Cymene 17 1.4.1.15Traditional uses of N.sativa seeds 17-18 1.4.1.16 Antibacterial action of N.sativa 18 1.4.1.17 Antifungal action of N.sativa 19

1.4.1.18 Antimicrobial and antiparasitic effects 19-21

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May 2015

1.4.1.19 Physiological effects 21-24 1.4.1.20 Anticancer effects 24-29

1.4.1.21 Anti inflammatory and immune

modulatory effects

29-30

1.4.1.22 Antioxidant and hepatoprotective effects 31-32 1.4.1.23 Toxicity of Nigella sativa 32-33 1.4.1.24 Actions on high risk groups 33

1.4.2Mycetoma (=Maduura Foot) 35 1.4.2.1Characteristics 35 1.4.2.2 Epidemiology 37-39 1.4.2.3 Etiology 40

1.4.2.3.1 Eumycetoma 40-41 1.4.2.3.2 Actinomycetoma 41-42

1.4.2.4 laboratory Diagnosis 43 1.4.2.4.1Specimen 43 1.4.2.4.2 Direct Microscopy 43-44 1.4.2.4.3 culture 45 1.4.2.4.4 Serology 45

1.4.2.5 Management 46-48 1.4.2.6 Detailed Descriptions for most common

microorganisms 49

1.4.2.6.1 Madurella mycetomatis 49 1.4.2.6.2 Pseudallescheria boydii (sexual state);

Scedosporium apiospermum(asexual state) 50

1.4.2.6.3 Nocardia spp. 52 1.4.2.6.4 Streptomyces spp. 53

1.4.2.6.5 Actinomadura spp 54 1.4.2.7 Detailed Descriptions for disease 56 1.4.2.7.1 Actinomycosis: 56 1.4.2.7.2 Mycetoma (Actinomycotic or

Eumycotic ) 57

1.4.2.7.3 Nocardiosis

59

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May 2015

Chapter

two

MATERIALS & METHODOLOGY 2.1. Material 61-63 2.1.1. Nigella sativa Origin 61 2.1. 2.Other materials 62 2.1.3.Tested bacterial / fungal strains 63 2.2 Method 64-70 2.2.1Preparation of plant extracts 64 2.2.2Preparations of culture media 64 2.2.2.1 Preparations of Sabouraud Dextrose Agar: 64 2.2.2.2 Preparations of blood agar 64 2.2.3Preparation of Specimens before inoculated 64-65 2.2.2 Inoculation or culture of media 65 2.2.5 Phytochemical Screening 65 2.2.5.1 Test for Carbohydrates and / or Glycosides 65-66 2.2.5.2 Test for tannins 66 2.2.5.3 Test for alkaloids and / or nitrogenous bases 66 2.2.5.4 Test for flavonoids 67 2.2.5.5 Test for Saponins 67 2.2.5.6 Test for unsaturated sterols 68 2.2.5.7 Teste for Coumarins 68 2.2.5.8 Teste for Cardiac-glycoside 69 2.2.5.9 Test for Anthracenosides 69 2.2.6.Methods used for screenning anti-oxidant activity 70 2.4.6.1. DPPH radical scavenging assay 70 2.4.6.2. Iron chelating activity assay 70

Chapter

three

RESULTS & DISCUSSION 3.1. Results 71

3.1.1 Phytochemical investigation of the seeds of

N.sativa 71-74

3.1.2. Screening for antioxidant 74 3.1.3. Screening for antimicrobial activity 75-89 3.1.3.1. Subculture from Saudi Arabia examined after

7 days of incubation 75

3.1.3.2. Subculture from Saudi Arabia examined after

14 days of incubation 78

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May 2015

3.1.3.3. Subculture from Saudi Arabia examined after

23 days of incubation 80

3.2. Discussion 90-92

Chapter

four

Conclusion & Recommendation 93

Chapter

fife

References 94-

113

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May 2015

LIST OF TABLES

Table

No.

Table Name Page

No. 1.1 Some names of Nigella in comparison to local term 6 1.2 Chemical constituent of Nigella sativa seed 12-13 1.3 The nutritional value of Black Seeds 15 1.4 Biological activities of N.sativa 18 1.5 Methods of N.sativa application for treatment of diseases 34 1.6 Characteristics of the main species of the Actinomycetes 42 1.7 The color of the grains in mycetomas & related species 44

1.8 Differentiation of aerobic Actionmycetes 55

1.9 The main clinical differences between eumycotic and actinomycotic

mycetoma 60

2.1 Instruments 61 2.2 Media 61 2.3 Solvents 61 2.4 Tested fungal strains (Eumycetoma) 63 2.5 Tested bacterial strains (Actinomycetoma) 63 3.1 The percentage yield of the oil 71 3.2 The phytochemical screening of the methanolic extract 71-72 3.3 The phytochemical screening of the chloroformic extract 73-74 3.4 Screening of methanolic extract for antioxidant 74 3.5 Antifungal activity against (Pseudallescheria boydii and 4samples of

Madurella mycetomatis) after 8 days 82

3.6 Antifungal activity against (Pseudallescheria boydii and 4samples of

Madurella mycetomatis) after 30 days 82

3.7 Antibacterial activity against (Nocardia brasiliensis, N.asteroides and

Streptomyces samaliensis) after 8 days 86

3.8 Antibacterial activity against (Nocardia brasiliensis, N.asteroides and

Streptomyces samaliensis) after 30 days 86

3.9 Minimum inhibitory concentration of methanol oil extract against

mycetoma 89

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May 2015

LIST OF FIGURES

Figure

No.

Figure Name Page

No. 1.1 Nigella sativa 8 2.2 Nigella damascene 8 1.3 Nigella arvensis 8 1.4 Oil of Nigella sativa: 9 1.5 Nigella plant with unripe seed pods 10 1.6 Unripe Nigella capsule (culinary) 10 1.7 Nigella plants at the end of their flowering period 10 1.8 Nigella seeds 11 1.9 T.S. of the N.sativa seed 11 1.10 Chemical Structures of some major compounds isolated from N.

sativa 14

1.11 Seeds of Argemone Mexicana 16 1.12 Onion (Allium cepa L) seeds 16 1.13 Mycetoma infections 36-37 1.14 Map showing the geographical distribution of some eumycetoma

agents 39

1.15 Map showing the geographical distribution of mycetoma in sudan 39

1.16 Madurella mycetomatis colonies 40 1.17 Pseudallescheria boydii colonies 41 1.18 Comparison between of Actinomycotic & Eumycotic grain 43 1.19 Actinomycete & Nocardia filaments 44 1.20 Actinomycete filaments from culture 45 1.21 Schematic Representation of the Balance between Amphotericin B-

Induced Nephrotoxicity, Patient Risk Factors, and Cost Effective

Therapy

47

1.22 Anti fungal drugs overall average cost in 1993 48 1.23 Microscopic morphology of Madurella mycetomatis 49 1.24 Microscopic morphology of Pseudallescheria boydii (sexual state);

Scedosporium apiospermum(asexual state) 51

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May 2015

1.25 Microscopic morphology of Nocardia spp. 52 1.26 Microscopic morphology of Streptomyces spp. 53 1.27 Microscopic morphology of Actinomadura spp. 54 1.28 Organism morphology of Actinomycosis 56 1.29 Organism morphology of ( Actinomycotic or Eumycotic ) 58 1.30 Organism morphology of Nocardiosis 59 3.1 Madurella mycetoma(SA) subculture after 7 days 75 3.2 Madurella mycetoma(SU2) subculture after 7 days 75 3.3 Madurella mycetoma(pot) subculture after 7 days 76 3.4 Nocardia asteroides subculture after 7 days 76 3.5 Nocardia brasiliensis subculture after 7 days 76 3.6 Comparison of change in media colour between Culture tubes &

blank tube media 77

3.7 Madurella mycetoma(SA) subculture after 14 days 78 3.8 Madurella mycetoma(Su2) subculture after 14 days 78 3.9 Madurella mycetoma(pot) subculture after 14 days 79 3.10 Nocardia asteroides subculture after 14 days 79 3.11 Nocardia brasiliensis subculture after 14 days 79 3.12 Madurella mycetoma(SA) subculture after 23 days 80 3.13 Madurella mycetoma(SU1) subculture after 23 days 80 3.14 Madurella mycetoma(pot) subculture after 23 days 81 3.15 Nocardia asteroides subculture after 23 days 81 3.16 Nocardia brasiliensis subculture after 23 days 81 3.17 Culture of methanol extracts tested against Madurella

mycetomatis(SA) 84

3.18 Culture of methanol extracts tested against Madurella

mycetomatis(Pot) 84

3.19 Culture of methanol extracts tested against Madurella

mycetomatis(Su1) 84

3.20 Culture of methanol extracts tested against Madurella

mycetomatis(Su2) 84

3.21 Culture of methanol extracts tested against Pseudallescheria boydii 84 3.22 Culture of chloroform extracts tested against Madurella

mycetomatis(SA) 85

3.23 Culture of chloroform extracts tested against Madurella

mycetomatis(Pot) 85

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May 2015

3.24 Culture of chloroform extracts tested against Madurella

mycetomatis(Su1) 85

3.25 Culture of chloroform extracts tested against Madurella

mycetomatis(Su2) 85

3.26 Culture of chloroform extracts tested against Pseudallescheria

boydii 85

3.27 Culture of methanol extracts tested against Nocardia brasiliensis 87 3.28 Culture of methanol extracts tested against Nocardia asteroides 87 3.29 Culture of methanol extracts tested against Streptomyces

samaliensis 87

3.30 Culture of chloroform extracts tested against Nocardia brasiliensis 88 3.31 Culture of chloroform extracts tested against Nocardia asteroides 88 3.32 Culture of chloroform extracts tested against Streptomyces

samaliensis 88

3.33 Minimum inhibition concentration of methanol oil extract against

mycetoma 89

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May 2015

Acknowledgments:

I thank almighty Allah for giving me health, strength and patience to perform this

study.

I would like to experess my sincere thanks to my supervisor Prof.Yahia M.Ahmed

El-Imam, Department of pharmacognosy, Faculty of pharmacy, Ribat National

University, for his continuous encouragement, advises and patience supervision of this

study.

Words are failed to express my grateful and thanks to Dr.Mohammed Chyad Al-

Noaemi, doctor of pathophysiology, faculty of medicine, Al-yarmok college, khartoum,

for his patience to help me with his knowledge, experience, direction, advising, with his

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May 2015

fatherly care for me, his unlimited support and constant encouragement to complete this

study.

My special appreciation to Dr. Ahmad Mohamad Al-Barag, head of department of

Mycology laboratory in King Khalid hospital, faculty of medicine, King Saud University,

Saudi Arabia, Al-Riydh who was largely responsible for the improvement of this study

with his advise, supplement of valuable materials of the study and encouragement to

finish it.

My warmest heart thanks to Dr.Maawahib Abdel Moneim Ibrahim, member of

Mycology laboratory in Stak laboratory for her close constant help and support in

performing this study.

My special thanks for Nour , Def Allah, Melven and Roby (staff members of

Mycology laboratory in king Khalid hospital), for allowing me to use its facilitates and

their continuous help to do this work.

Sincere thanks and appreciation to my friends: Dr.Yasser Hamad Alnel & Dr.Mazen

Mohamad Mustafa for helping in writing & printing to complete this search.

Deep thanks to all who offered helps and encouraged me to complete this work.

Everlasting thanks to my father, mother, brothers and sisters, who show continuous

support and encouragement for me hoping to see this work finished, to see me in better

situations.

More and more everlasting thanks to ALLAH.

Abstract: Black cumin (Nigella sativa) is a spice native to Mediterranean region (family

Ranunculaceae). The seeds of black cumin have been used in traditional medicine by

many Asian, Middle Eastern and Far Eastern Countries to treat headache, coughs,

abdominal pain, diarrhea, asthma, rheumatism and other diseases. The oil extracts of the

seeds have been shown to possess antioxidant, anti-inflammatory, anticancer, analgesic

and antimicrobial activities.

In Sudan Madurella mycetomatis is the commonest causative organism causing

Eumycetoma and Streptomyces somaliensis is the commonest organism

causing actinomycetoma (Fahal et al, 2011).

In general, the current treatment for mycetoma is expensive and unsatisfactory. It needs a

long duration, and has many side effects. (Mahgoub ES.,1984) .

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May 2015

If drugs not effective and bone is infected, amputate the limb or debride tissue and

continue treatment up to years.

In the present study, anti-mycetoma activity of the chloroform and methanol extracts of

Nigella sativa seed were studied in vitro against five isolates of fungi type

(Pseudallescheria boydii and 4samples of Madurella mycetomatis) and three isolates of

bacteria type ( Nocardia brasiliensis, N.asteroides and Streptomyces samaliensis ) of

mycetoma.

The results showed that the methanol and chloroform extracts had antimycetomal activity

against Nocardia brasiliensis and N.asteroides with a minimum inhibitory concentrations

of 4% and 8% respectively. The least anti-mycetomal activity was recorded against

Streptomyces somaliensis with methanol extract and MIC of 0.5% with chloroform

extract .

On the other hand chloroform extract showed activity against Madurella mycetomatis

with minimum inhibitory concentration 2% while in case of Pseudallescheria boydii the

minimum inhibitory concentration was 8% ,while methanol extract with MIC of 0.15%

with all fungal types.

The methanolic extract was also screened for its anti-oxidant activity. Iron chelating

recorded a high activity than DPPH radical scavenging assay.

Qualitative phytochemical screening of the methanol extract showed the presence of

tannins, alkaloids, quarternary bases & oxidized amines, saponins, carbohydrates,

reducing sugars, unsaturated sterols, coumarins, flavonoid, terpenoids, cardiac

glycosides, essential oil, fatty acids.

On other hand the qualitative phytochemical screening of the chloroform extract showed

the presence of alkaloids, quarternary bases & oxidized amines, saponins, unsaturated

sterols, coumarins, flavonoid, terpenoids and cardiac Glycosides.

اىخلاصح

) انؽثح انسداء )انعلا ساذافا( ي انراتم الأطهح ف يطقح انثؽش الأتغ انرسؾ انر ذؽذس ي ػائهح

رااخ قذ أسرخذيد تزس انك الأسد ف انطة انرقهذ ي قثم انؼذذ ي انثهذا ف انششق الاسؾ ( انؽ

. الإسال انشت انشياذضو غشا ي الأيشاعدل ششق أسا نؼلاض انظذاع انسؼال آلاو انثط

إيرلاك انفؼانح انؼادج نلأكسذ , انؼادج نلإنراتاخ , انؼادج قذ أشثد ا يسرخهض صد انؽثح انسداء

نهسشؽا , يسك شاؽاخ يؼادج نهكشتاخ.

انفطش نهاسريا انسثؽح انرسهسهح الأكصش ف انسدا انادسهح انفطشيح الأكصش شػا يسثث نهع

, ؽراض نفرشج غش اظػ , شػا يسثث نهع انثكرش نهسريا. تشكم ػاو انؼلاض انؽان نهاسريا تاع انص

ؽه نهؼلاض نذح ػذج أشاس ظاثح.

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May 2015

نظاب أ الاسعح انظاتح يغ الإسرشاس ف ؼانح ػذو عاغ انؼلاض أطة انؼظى , رى انهعء نؽم ترش انؼؼ ا

ف أخز انؼلاض نذج سح تؼذ انؼهح.

نسرخهظ ي تزس ؼثح انثشك هاسريا انشاؽ انؼاد ن دساسح دذ ز انذساسح, ف

انهسكشح انكارتح ) انفطش ي انع أاع ػذ خسح ف انخرثش ذى الإخرثاس انرعشثانصال( انكهسفسو )

انكاسدح انثشاصهح, ) انثكرش عان يشلاز ااع ػذ انثذح استغ أاع ي انادسهح انفطشيح (

.اناسريا ي( انسثؽح انرسهسهحانكاسدح انعح,

انرائط ا انسرخهض انصان انسرخهض انكهسفسي نذى انرأشش انؼاد نهاسريا يغ أظشخ

% تانران. كا أقم ذأشش يؼاد 4% 2اقم ذشكض فؼال كا انكاسدح انعح انكاسدح انثشاصهح

% يغ انسرخهض 5.0فؼال كا نهسريا ػذ انسثؽح انرسهسهح يغ انسرخهض انصان أقم ذشكض

انكهسفسي .

أقم انادسهح انفطشيح ي اناؼح الأخش أظش انسرخهض انكهسفسي انرأشش انؼاد نهاسريا ػذ

%, نك كا أقم ذشكض 8كا أقم ذشكض فؼال انهسكشح انكارتح انثذح% ف إسرخذايا ػذ 2ذشكض فؼال كا

يغ انسرخهض انصان ػذ ظغ انع انفطش ي اناسريا. %0..5فؼال

ػذ ػم يسػ نهشاؽ انؼاد نلأكسذ نهسرخهض انصان تئخرثاس ذخهة أ ذكانة انؽذذ أظش شاؽ أػه ي

إقراص انشقق انؽشج تئسرخذاو يادج أخرثاس

. DPPH (1,1-diphenyl-2-picrylhydrazyl)

نذساسح انسػ انكائ انثاذ نهسرخهظ )انصال انكهسفسو ( ؼس أشثرد انذساسح ا ذاند ز ا

انسرخهض انصان ؽر ػه ياد دتاغح يركصفح, قهذاخ, انقاػذ انشتاػح, الأياخ انؤكسذج, طاتاخ,

ذ, ظلاكسذاخ قهثح, صخ ؽاس , انكشتذساخ, انسكشاخ انخرضنح, كيشاخ, فلافاخ, ذشت

أؼاع أيح.

ي اؼح أخش أشثرد انذساسح أ انسرخهض انكهسفسي ؽر ػه قهذاخ, انقاػذ انشتاػح, الأياخ

انؤكسذج, طاتاخ, كيشاخ, فلافاخ, ذشتذ, ظلاكسذاخ قهثح.

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May 2015

1. Introductions:

Folk medicine is the mother of all other systems of medicine and even modern

medicine. The knowledge about certain herbs, which have curative and palliative effects

on disease conditions, has been transmitted from one generation to another by

experienced elders and also by tribal herbal specialists. Every culture throughout history

has used plants to treat medical problems. Originally, the specific utility of herbs was

assumes to be based on their shape or colour. With this primitive Doctrine of Signatures

approach, heart shaped leave were used against heart problems, plant with red flowers

were applied to treat bleeding disorders, and so on (Cassileth, 1998) Plant products have

been used for centuries as medicines. Today in most of the developing world, plant

remedies are the most prevalent treatments, with recipes handed down from generation to

generation. They are available, and there is generally a more culturally sensitive attitude

on the part of these practitioners (Spencer & Jacobs, 1999).

Nigella sativa, is one of the oldest medicinal plants which has been used for the

treatment of a broad range of illness. It has a wide range of, antibacterial (Toama et al,.

1974), (Halamova et al,. 2010), antifungal (Rogozhin et al,. 2011), antiviral (Kmen,.

2001), anti-arthritic (Tekeoglu et al ,2006), anti-neoplastic (Khan et al,. 2011),( Ali &

Blunden,. 2003), anti-diabetic (Kanter et al,. 2003) ,( Rchid et al,. 2004), (El-

Dakhakhny et al,. 2002), antioxidant (Khlife & Lupidi,. 2007),( Cemek et al,. 2006),

anti-inflammatory (El-Dakhakhny et al,. 2002),( Mansour & Tornhamre,. 2004), anti-

hypertensive (Ali & Blunden,. 2003) ,spasmolytic and bronchodilator (Gilani et al,.

2001), hypo-lipidemic effects (Dahri et al,. 2005) ,( Nader et al,. 2010), nephro and

hepatoprotective( Al-Kubaisy & Al-Noaemi,. 2007),( Nasim et al,. 2006).

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However we have a lot of diseases that have no treatment like Mycetoma (=Madura

foot ) which is endemic in tropical and subtropical regions {Sudan, Somalia, Senegal,

India, Yemen, Mexico, Venezuela, Columbia, Argentina and others (Fahal , 2011)}.

The African continent seems to have the highest prevalence especially in Sudan, which is

considered to be the (Mycetoma homeland), and Central Sudan is the most affected part

of the country (Fahal, 2011).

Rippon, 1988 reported that Mycetoma in Sudan appears to have the highest number of

cases per capita per year, which amounts to about 300 to 400 actual infections.

Mycetomas is a chronic progressive localized infection of the skin and subcutaneous

tissue which is believed to originate following the implantation of the causative agents

through minor trauma to the skin, usually from vegetative material such as thorns or

splinters( Fahal, 2004) , (Gumaa, 1994), (Mahgoub., 1994) ,(McGinnis,1996).

The disease frequently involves lower extremities of barefooted adult rural men involved

in agriculture or cattle related works.

Multiple nodules may appear on the same limb usually painless. These lesions rupture,

resulting in sinus tracts, and eventually if untreated, leads to destruction of deeper tissues

and bone, resulting in deformity and disability which may necessitate amputation,

(McElroy et al ,1992), (Ahmed et al,1999),( Sharma et al,2008).

Worldwide, 60% of mycetomas are bacterial (actinomycetoma) and 40% are fungal

(eumycetoma) ,(Kemper,2000),( Pang ,2004).

In Sudan Streptomyces somaliensis is the commonest organism causing actinomycetoma

and Madurella mycetomatis is the commonest causative organism causing Eumycetoma

(Fahal, 2011).

In general, the current treatment for mycetoma is expensive and unsatisfactory. It needs a

long duration, and has many side effects. As Nigella sativa was proved to have a broad

spectrum of antibacterial and antifungal activity, (Kemper, 2000),( Pang,,2004) the aim

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of the present study was to test its effects on mycetoma whether bacterial or fungal type

which could supplement the current therapeutic methods for mycetoma.

1.2 Rationale /Justification:

(ا ن ىذه الحبة السوداء شفاء من كل داء ا لا السام، كلت و ما السام؟ كال: الموت) :عائشة أ م المؤمنين أ نها سمعت النبي صلى الله عليو و سلم يلول عن

أ خرجو البخاري

Prophet Mohammed (peace be upon him) stated that ―The black seed heals all diseases

except death‖ (Sahih Bukhari 71:592).

Mycetoma disease is widely spread in sudan and it is considered as Mycetoma homeland.

Mycetoma caused by fungi are usually resistant to chemotherapy (Restrepo., 1994) and as

all anti fungal drugs induced nephrotoxicity, the current research was an attempt to find

an affordable and safer treatment for this disease.

1.3 Objectives:

Main objectives:

The aim of the present study is:

1- To investgate the chemical composition of N.sativa.

2- To screen the seed extracts for the antimicrobial and antioxidant activites.

3- To provide an effective antifungal drug that does not induce nephrotoxicity.

4- To avoid the social consequences of amputation.

5- To help in the eradication of Mycetoma, because it is a life-mutilating disease and

have a high morbidity and can be fatal and both surgical and medical treatments

are not satisfactory.

1.4 literature review:

1.4.1 Nigella sativa:

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Nigella sativa (Ns), an annual flowering plant belongs to the family Ranuncuaceae . Ns a

natural food additive, economically important and has a history of 2500 years which

makes it one of the safest plant extracts for human consumption. It is believed to be

indigenous in the dry temperate dimater of Mediterranean region but has been cultivated

into other parts of the world including the Arabian peninsula, northern Africa, Egypt,

Jammu-Kashmir, HimachalPradesh, Afghanistan, Baluchistan, Iran and probably western

Asia. The seeds, rich in essential oil, are consumed widely as condiment. In the

indigenous system of medicines, seeds and reregarded as stimulants and carminatives and

found to be useful in diarrhoea and dyspepsia. Also, this plant is used for culinary

purposes and for flavoring foods and beverages (Abdugniew et al., 1997).

1.4.1.1 History:

The earliest cultivation of N.sativa "is still scanty", but these is report that N.sativa seeds

have been found in several sites from ancient Egypt, including Tutan khamun's tomb.

Although its exact role in Egyptian culture is unknown, it is known that items entombed

with a pharaoh were carefully selected to assist him in the after life.

The earliest written reference to N. sativa is thought to be in the book of Isaiah in the Old

Testament where the reaping of nigella and wheat is contrasted

N. sativa "was another traditional condiment of the Old World during classical times; and

its black seeds were extensively used to flavor food.―

Although nigella is not mentioned in the common Bible translations, there is good

evidence that an obscure plant name mentioned in the Old Testament means nigella; if

true, this would indicate that nigella is cultivated since far more than two millennia

(www.ikitab.com/herbs/blackseed.html).

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1.4.1.2 Nigella sativa in Islam:

In Islam, it is regarded as one of the greatest forms of healing medicine available.

Prophet Muhammad once stated that the black seed can heal every disease -- except death

(Sahih Bukhari 71:592).

1.4.1.3 Names &Etymology:

Botanical Name: Nigella sativa

In English: it is called fennel flower, black caraway, nutmeg flower, Roman coriander, or

black onion seed. Etymology: Nearly all names of nigella contain an element meaning

black in reference to the unusually dark color of the seeds (Redgrave. et al, 1933).

There is a lot of confusion about the names of this spice: In some English sources,

Central Asia and Northern India, it is called black cumin, black caraway and black onion

seed but there is no botanical relation between Nigella sativa and any of these plants

(www.plantnames.unimelb.edu.au).

Table 1.1 Some names of Nigella in comparison to local term:

(www.plantnames.unimelb.edu.au).

Language Name Black German Schwarzkümmel Schwarz

Norwegian Svartkarve Svart

Swedish Svartkummin Svart

Latvian Melnsēklīte Melns

Lithuanian Juodgrūdė Juodas

Estonian Mustköömen Must

Finnish Mustakumina Musta

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Hungarian Feketeköméni Fekete

Latin Nigella Niger

Italian grano nero Nero

Spanish Niguilla Negro

Portuguese cominho-preto Preto

Romanian Negrillică Negru

Polish Czarnuszka Czarny

Ukrainian Chornushka Chornyj

Russian Chernushka Chyornyj

Czech černý kmín Černý

Slovak Černuška cern, cernoch

Slovenian vzhodna črnika Črn

Croatian crni kumin Crn

Serbian crno seme Crn

Greek Melanthion Melas

Arabic kamun aswad Aswad

Amharic tik'ur azmud tik'ur

Turkish kara çörek otu Kara

Turkish siyah kimyon Siyah

Farsi siah daneh Siah

Kurdish Siawasa Siawa

Sanskrit Krishnajira Krishna

Hindi Kalaunji Kala

Panjabi Kalonji Kala

Sinhala Kaladuru Kalu

Kannada kari jirige Karidu

Malayalam Karinjirakam Kari

Chinese hei zhong cao Hei

Thai thian-dam Dam

Indonesian jintan hitam Hitam

1.4.1.4 Scientific classification :

Kingdom: Plantae

Order: Ranunculales

Family: Ranunculaceae

Division: Magnoliophyta

Class : Magnoliopsida

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Genus: Nigella

Species: N .Sativa

(Redgrave. et al, 1933).

1.4.1.5 Origin:

Nigella sativa is an annual flowering plant. Is believed to be indigenous to the

Mediterranean region but has been cultivated into other parts of the world including the

Arabian Peninsula, northern Africa and Probably Western Asia. Today, the plant is

cultivated from Egypt to India (Redgrave.et al,. 1933).

1.4.1.6 Characteristics:

Taste of N. sativa flowers: Has a pungent bitter taste

Taste of N.sativa seeds: Is aromatic and slightly bitter; it is called pungent and smoky

and even compared to black pepper. There is, however, some pungency in unripe or not

yet dried seeds.

Odor of N. sativa flowers: A faint smell of strawberries. It is used primarily in candies.

Odor of N.sativa seeds: Have little odor, but when ground or chewed they develop a

vaguely oregano-like scent (Redgrave. et al ,1933).

1.4.1.7 Species of N.sativa:

There are three Species of Black Seeds (Redgrave et al ,1933):

1-Nigella sativa or small Fennel Flower.

2-Nigella damascene or Wild Fennel.

3-Nigella arvensis or Small Fennel.

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Fig 1.1

Fig 1.2

1.4.1.8 Morphology and Description of N. sativa:

The Stalk: It grows to 20–30 cm (7.9–12 in) tall, and the stalk is hard or stiff, ragged,

covered by soft hair, with finely divided.

The leaves: it blush green colored and feather crisscross and linear (but not thread-like) 1

to 2 inch long and are spear shaped.

Nigella

sativa

Nigella.

damascena

Nigella.

arvensis

Fig 1.3

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The flowers: are delicate, and usually colored pale blue and white or greenish blue, are

one inch in diameter with 5–10 petals. Flowers appear in early winters.

The fruit: is a large and inflated capsule composed of 3–7 united follicles, each

containing numerous seeds' ruts in winters. The mature fruit are round, triangular, black

colored, and aromatic, wrinkled and has many seeds in them.

The seed: black colored is used as a spice and pulp is white (Redgrave et al, 1933).

1.4.1.9 Description of oil of Nigella sativa:

The oil is reddish brown colour. They are also used as a stabilizing agent for edible

fats. Locally, oil is Anaesthetic (Redgrave et al, 1933).

Fig 1.4 Oil of Nigella sativa: (Redgrave et al, 1933).

1.4.1.10 Nigella sativa at different stages of growth:

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Fig 1.5 Nigella plant with unripe seed pods: (Redgrave et al, 1933)

Fig 1.6 Unripe Nigella capsule (culinary): (Redgrave. et al, 1933)

Fig 1.7 Nigella plants at the end of their flowering period: (Redgrave et al, 1933)

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Fig 1.8 Nigella seeds: (Redgrave et al, 1933)

Fig 1.9 T.S. of the N. seed:

(Redgrave et al, 1933)

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1.4.1.11 Chemical Constituents:

Table 1.2 Chemical constituent of Nigella sativa seed:

Main chemical

constituents

Names References

Essential oil

Fixed oil (Cheikh-Rouhou et al., 2007

and Houghton et al., 1995).

Thymoquinone (TQ) (Chopra et al.,1956 ,Adams,

2007 and Hajhashemi et al.,

2004)

P-cymene (Hajhashemi et al., 2004)

a-Pinene (Hajhashemi et al., 2004)

Dithymoquinone&

thymohydrquinon

(Vuorelaa et al., 2004,Adams,

2007 and Abou-Basha et al.,

1995)

Oligocondensation products

(nigellone)

(Adams, 2007 and tekeogluet

al., 2006).

Thymol (Hajhashemi et al., 2004 and

tekeogluet al., 2006).

Terpenoid Other terpene derivatves: Carvone ,

Limonene,4-terpineol, citronellol, t-

anethol, sesquiterpene

(Hajhashemi et al., 2004 and

Burits and Bucar, 2000)

Fatty oil :

1-Unsaturated fatty

acids:

Linoleic acid

(Adams, 2007 and

Hajhashemi et al., 2004)

Oleic acid (Adams, 2007 and

Hajhashemi et al., 2004)

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Eicodadienoic acid (Hajhashemi et al., 2004)

Dihomolinoleic acid (Hajhashemi et al., 2004)

2- Saturated fatty

acids:

Palmitic ,Stearic acid (Cheikh-Rouhou et al., 2007

and Adams, 2007).

Alkaloids:

1-Isoqinoline

alkaloide:

Nigellicimine & Nigellicimin-N-

Oxide

(tekeogluet al., 2006 and

Kruk et al., 2000),

2-Pyrazol alkaloids

or imdazole ring::

Nigellidine & Nigellicine (tekeogluet al., 2006 and

Kruk et al., 2000),

Saponins: Melanthin & Alpha-hederin

(nigelline)

(Adams, 2007 and Akhondian

etal., 2007)

Tannins (Adams, 2007).

sterol : sitosterol, stigmasterol (El-Mahmoudyet al., 2002).

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Fig 1.10 Chemical Structures of some major compounds isolated from N. sativa

Table 1.3 The nutritional value of Black Seeds:

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Nutrient

Average

References

Energy (kcal (MJ) (Haq et al., 1999)

Protein (g) (Haq et al., 1999 and Ghedira, 2006)

fat (Ghedira, 2006).

carbohydrates (Ghedira, 2006).

crude fiber (Ghedira, 2006) (Ali and Blunden, 2003).

carotene (vit.A) (Cheikh-Rouhouet al., 2007)

Thiamin (mg) (Benkaci-Ali etal, 2007)

Riboflavin (mg) (Benkaci-Ali etal, 2007).

Pyridoxine (mg) (Benkaci-Ali etal, 2007).

Niacin (mg) (Benkaci-Ali etal, 2007).

Calcium (mg) (Benkaci-Ali etal, 2007) (Ali and Blunden, 2003).

Iron (mg) (Benkaci-Ali etal, 2007) (Ali and Blunden, 2003 and Singh et al., 2005).

Copper (mg) (Benkaci-Ali etal, 2007) (Ali and Blunden, 2003 and Singh et al., 2005).

Zinc (mg) (Benkaci-Ali etal, 2007) (Ali and Blunden, 2003 and Singh et al., 2005).

Phosphorus (mg) (Benkaci-Ali etal, 2007) (Ali and Blunden, 2003 and Singh et al., 2005).

Folacin (mg) (Benkaci-Ali etal, 2007)

Na (Benkaci-Ali etal, 2007) (Ali and Blunden, 2003).

K (Benkaci-Ali etal, 2007) (Ali and Blunden, 2003).

1.4.1.12 Commercial Nigella oil:

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May also contain parts of the essential oil, mostly thymoquinone, by which it acquires

an aromatic flavor, trace elements, vitamins and enzymes

It contains 58% of essential fatty acids including omega 6 and omega 3

(www.caravanetresor.com/tiny-teasure.htm).

1.4.1.13 Adulterations:

The market samples of the seeds of N. sativa are often adulterated.

1- seeds of Argemone mexicana are often mixed with it :

Fig 1.11 seeds of Argemone mexicana

2-N. sativa seeds are also commonly confused with onion (Allium cepa L) seeds.

Fig 1.12 onion (Allium cepa L) seeds

(www.caravanetresor.com/tiny-teasure.htm)

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1.4.1.14 Roles of Nigella sativa constituents:

1.4.1.14.1Thymoquinone:

1- It is considered as anticancer specifically the rectum and colon cancer by gene

called (P53) (Salem and Hossain, 2000).

2- Prevent from the angiogenesis (Anti-tumer) (Salem and Hossain, 2000).

3- Antinflamatary and important in treatment of romatoide problem

(Ali and Blunden, 2003 and Ramadan, 2007).

4- In treatment of the respiratory distress syndrome acute (Gilani et al., 2001).

5- Hypoglycemic effect (Zaoui et al., 2002a).

1.4.1.14.2 p- Cymene:

It is considered bactericidal, specifically against E.coli and prevent the

deterioration of apple juice(El-Fatatry, 1975).

1.4.1.15 Traditional uses of black seed:

1- Black Seed is used in perfumery, especially in soaps, and as a spice in cakes,

breads, pastries, confectionery, sauces, cheese, etc. Also used as flavouring

material.

3- The seeds of N. savita are considered carminative, stimulant, diuretic,

Emmenoagogue, Galactaogogue, and are used in the treatment of mild cases of

puerperal fever.

4-They are externally applied for eruptions of skin. Alcoholic extracts of the seeds

show antibacterial activity against Micrococcus pyrogenes var. aureus and

Escherichia coli.

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5- Preliminary clinical trials indicate its possible therapeutic use in some

conditions of cough and bronchial asthma. Clinical trials also indicate its use for

control of Blood Sugar & Chololesterol.

6- It is used for different treatment hair fall, head ache, rhinitis, piles, pain,

tastelessness, and indigestion.

7-The seeds are also used in the treatment of hydrophobia, tertiary fever, and

paralysis.

Table 1.4 Biological activities of N.sativa :

Antibacterial Antitumor Hypotensive

Anti yeast Antitoxic Diuretic

Antioxidants Antispasmodic Hypoglycemic

Antihyper cholesterolemic Hemostatic Hypolipaermic,

Bronchodilator

Analgesic Antifungal activities

1.4.1.16 Antibacterial action of N.sativa:

The crude extracts of N. Sativa were reported to have promising effect on multi-

organism as anti-bacterial ,anti-fungal , anti-yeast ,anti-protozoal ,anti -helmintic

action.

El-Fatatry, 1975 showed that Bacillus subtilis cannot grow in the diet containing

Nigella sativa because it stops the growth, that indicates the seed of N.sativa

contain anti-bacterial material .

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The crystal material isolated from oil solidification of Nigella sativa which is

known as thymoquinone has a large effect on bacteria (El-Fatatry, 1975).

The volatile oil that was extracted from the Nigella sativa showed an effect on

Gm+ve bacteria as: Staphylococcus aurous inhibition and the Gm-ve bacteria as:

E.colli likes effect of Streptomycin (Hanafii et al., 1991).

1.4.1.17 Antifungal action of N.sativa:

Nigella sativa was found to have antifungal activity against Candida albicans on

rats (Khan ., 2003) ( Manohar Et al., 2001).

The oil of Nigella sativa has a large effect on the tapeworm and threadworm

(Mahmoud et al., 2002).

Akhtar & Riffat., 1991 reported that Nigella sativa seeds has the same effect on on

tapeworm as that of neioklzumid .

Some of the other therapeutic properties attributed to N.sativa oil are anticestodic,

antinematodic, hepatoproctative (Mahmoud et al., 2002).

Antioxidant and antiviral effect against murine cytomegalo virus infection (Salem

and Hossain, 2000).

The crude extract of N.stiva seed exhibited spasmolytic and bronchiodialatory

activities (Gilani et al., 2001) .

1.4.1.18 Antimicrobial and antiparasitic effects :

Extracts of black cumin oil (BCO) have shown promising effects against bacteria, fungi,

parasites and worms. The purified compound thymoquinone (TQ) from black cumin oil

was found to have high antimicrobial effect against Gram positive microorganisms

(Manohar et al., 2001). The seed extracts of black cumin were found to inhibit the growth

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of Escherichia coli, Bacillus subtilis and Streptococcus feacalis (Mansour et al., 2002).

The antimicrobial activity of black cumin seed extract was further established against

several species of pathogenic bacteria and yeast (Manohar et al., 2001). The filter paper

discs impregnated with the diethyl ether extract of black cumin seeds caused

concentration dependent inhibition of Gram positive Staphylococcus aureus and Gram

negative Pseudomonas aerginosa and E.coli and a pathogenic yeast Candida albicans.

The extract showed antibacterial synergism with streptomycin and gentamicin and

showed an additive antibacterial synergism with streptomycin and showed an additive

antibacterial action with spectinomycin, erythromycin, tobramycin, doxycycline,

chloramphenicol, nalidixic acid, ampicillin, lincomycin and sulfamethoxyzole-

trimethoprim combination (Manohar et al., 2001). Interestingly, the extract of black

cumin seed successfully eradicated a non-fatal subcutaneous staphylococcal infection in

mice when injected at the site of infection (Mansour and Tornhamre, 2004). Recently,

crude extracts of black cumin seeds showed promising antimicrobial effects against

bacterial isolates with multiple resistances against antibiotics (Morsi, 2000). The most

effective extract were the crude alkaloid and water extracts. The antiparasitic actions of

BCO have been well documented (El-Mahdy et al., 2005 and Mahmoud et al., 2002).

The antihelminthic activities of BCO were studied by Ghedira (2006) who reported that

the essential oil from the black cumin seeds showed pronounced activity even in 1:100

dilutions against tapeworms and earthworms. Anticestodal effects of black cumin seeds

were studied in children infected naturally with the respective worms. A single oral

administration of 40 mg/kg of black cumin ethanolic extract reduced the percentage of

the fecal eggs without producing any adverse side effects in the doses tested (Akhtar and

Riffat, 1991). When given orally to Schistosoma mansoni-infected mice, a 2- week

treatment with BCO reduced the number of S.mansoni worms in the liver and decreased

the total number of ova deposited in both the liver and the intestine ( Mahmoud et al.,

2002). When BCO was administered in combination with praziquantel, the drug of choice

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for the treatment of schistosomiasis, the most prominent effects was a further lowering of

the dead ova number over that produced by praziquantel alone. These changes were

correlated mainly with the ability of BCO to improve liver function and the

immunological system of infected mice and partly to its antioxidant effects (Mahmoud et

al., 2002). The protection is also due to the ability of BCO and TQ to reduce the

cytogenetic damage induced by schistosomiasis infection (Aboul-Ela, 2002). The

antiviral effect of BCO was investigated using murine cytomegalovirus as a model

(Salem and Hossain, 2000). Intraperitoneal administration of BCO to mice strikingly

inhibited the virus titers in spleen and liver on day 3 of infection. The antiviral effects of

BCO were more potent than the action of Chinese traditional herbal medicine hochuekki

against murine cytomegalovirus (Hossain et al., 1999).

1.4.1.19 Physiological effects of TQ:

The oil extract of black cumin seeds has been reported to exert effects on various systems

including the respiratory, cardiovascular, gastric and uterine and smooth muscle (Shah

and Ray, 2003). The effects of intravenous administration of volatile oil and of TQ were

investigated on the respiratory system of the rat (Pagola et al., 2004). TQ was found to

increase the intratacheal pressure in the dose range of 4-32 ml/kg and 1.6-6.4mg/kg,

respectively. Although black cumin (N. sativa L.) oil (BCO) increased significantly the

respiratory rate in rats, it has any effect. The effects of BCO were antagonized

significantly by the treatment of the animals with atropine and reserpine, which may

mean that the oil-induced respiratory effects can be mediated through the release of

histamine and the indirect activation of muscarinic and cholinergic mechanisms (Pagola

et al., 2004).This also suggested that the removal of TQ from black cumin seed oil might

provide a potential centrally acting respiratory stimulant (Pagola et al., 2004).It was also,

demonstrated that the intravenous administration of black cumin oil (BCO) (4-32 ml/kg)

or TQ (0.2-1.6 mg/kg) to rats decreased the arterial blood pressure and the heart rate in a

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dose-dependent manner (Ghoisheh et al., 1999), hinting that the oil may possess

antihypertensive effects. The cardiovascular depressant effects of the oil were

significantly antagonized by atropine and cyproheptadine, which may mean that these

effects were mediated mainly centrally via indirect and direct mechanisms that involved

both 5-hydroxy tryptaminergic mechanisms (Ghoisheh et al., 1999). BCO has also been

shown to increase bile secretion in dogs and uric acid in rats as well as protect rats

against histamine-induced bronchospasm (El-Dakhakhany,. et al 2002a). The fatty and

petroleum extracts shortened bleeding time and inhibited fibrinolytic activity in rabbits

(Tekeoglu et al., 2006).In a recent study, the crude extract of black cumin seeds was

found to exhibit spasmolytic and bronchodilator activities mediated possibly through

calcium channel blockade and this activity was concentrated in the organic fraction of the

extract (Gilani et al., 2001).

Traditionally black cumin plant has been in use in the Middle East as a natural remedy

for diabetes. Significant reductions in blood glucose and cholesterol levels in humans

following the use of the plant were reported by Bamosa et al. (1997). The oil of this plant

has a great potential in the treatment of diabetic animals because of its combined

hypoglycemic (Zaoui et al., 2002a) and immune-potentiating properties (Haq et al.,

1999). An extract mixture of black cumin, myrrh, gum Olibanum. gum asafetida and aloe

plants was found to lower blood glucose in streptozotocin diabetic rats (Mansour and

Tornhamre, 2004). It was found that the plant extracts significantly decreased hepatic

gluconeogenesis, suggesting that it may prove to be useful therapeutic agent in the

treatment of non-insulin-dependent diabetes mellitus. Similar insulinotropic effects of

BCO were recently observed in streptozotocin plus nicotinamide-induced diabetes

mellitus in hamsters (a model of type 2 diabetes) orally fed with the oil (Fararhet al.,

2002). The ability of BCO to lower blood giucose concentrations was later confirmed in

streptozotocin diabetic rats following 2, 4 or 6 weeks of treatment (El-Dakhakhany et al.,

2002b).

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In many Islamic countries black cumin and its derived products are consumed for

traditional treatment of blood homeostasis abnormalities and as a treatment for

dyslipidemia (Zaoui et al., 2002a). Several studies support the use of BCO extract for the

treatment of thrombosis and dyslipidemia (Labhal et al., 1997, Enomoto et al., 2001 and

zaoui et al., 2002a). In addition an aqueous suspension of black cumin seeds was found

to decrease the serum total lipids and body weight in Psammomys obesus sand rat

(Labhal et al., 1997). Analogous results, accompanied by decreases in serum lipid levels

have also been observed in rats chronically treated with black cumin fixed oil (Zaoui et

al., 2002b). When animals were treated with an oral dose of 1 ml/kg body weight of the

black cumin seed fixed oil on daily basis for 12 weeks, the serum cholesterol,

triglycerides and the count of leukocytes and platelets decreased significantly as

compared to the control values (Zaoui et al., 2002a).

Black cumin is also used in Islamic medicine as a diuretic and hypotensive plant. In an

attempt to experimentally support the above traditional uses of the plant, a study was

conducted on the diuretic and hypotensive effects of the extract of black cumin seeds in

the spontaneously hypertensive rat (Zaoui et al., 2000). An oral dose of black cumin

extract significantly increased diuresis, after 15 days of treatment. The urinary

execretions of CI-, Na

+, K

+ and urea were increased after 15days of treatment. Evidence

indicates that BCO has a protective role against gastric ulcers (El-Dakhakhany et al.,

2000b). Oral administration of BCO for 2 weeks in rats produced a significant increase in

gastric mucin content and glutathione level and a significant decrease in gastric mucosal

histamine content without significant changes in free acidity and peptic activity of the

gastric juice (El-Dakhakhany et al., 2000b). Ethanol administration, however, produced

100% ulcer induction accompanied by a reduction in free acidity, mucin content and

glutathione level without any significant changes in peptic activity. When animals were

pretreated with BCO before ulcer induction by ethanol, a protection ratio of 53.56% was

noted as compared to the ethanol group (El-Dakhakhany et al., 2000b).

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1.4.1.20 Anticancer effects:

The avtive constituents of BCO have been found to exert antineoplastic effects both in

vitro and vivo using various models of carcinogenesis. Black cumin seed preprations (TQ

and TQ2) have been demonstrated to have significant antineoplastic activity against

various tumor cells in vitro (Swamy and Tan, 2000). The active principles of black cumin

showed 50% cytotoxicity against Ehrlich ascites carcinoma, Daltons lymphoma ascites

and Sarcoma-180 cells at a concentration of 1.5, 3 and 1.5mg, respectively, with little

activity against lymphocytes (Ali and Blunden, 2003). In vitro cytotoxicity was also

demonstrated against human pancreatic adenocacinoma, uterine sarcoma and leukemic

cell lines (Gali-Muhtasib et al., 2004). The growth inhibitory was found to be related to

the extracts ability to inhibit DNA synthesis as measured by the incorporation of tritiated

thymidine into cells. These findings were later confirmed by Worthen et al. (1998) who

assayed the in vitro cytotoxicity of a crude gum, a fixed oil and two purified components

of black cumin seed, TQ and TQ2, on several parental and multidrug resistant human

tumor cell lines. Although as much as 1% w/v of the gum or oil was devoid of

cytotoxicity, both TQ and TQ2 were cytotoxic for all of the tested cell lines. The ethyl

acetate fraction of black cumin seeds was later found to exhibit significant growth of

normal human endothelial cells (Swamy and Tan, 2000). Badary and Gamal El-Din

(2001) also showed that TQ inhibited the survival of fibrosarcoma cells with IC50 of

15mM by inhibiting the incorporation of 3H thymidine into cells. The cellular

mechanism of antineoplastic activity of TQ was only recently investigated (Shoieb et al.,

2003). In this study, the cellular mechanisms of TQ-induced cytotoxicity in parental and

cisplatin-resistant osteosarcoma human breast adenocarcinoma, human ovarian

adenocarcinoma and Madin-Darby canine cell lines have been examined. The cisplatin

resistant cells were the most sesetive to TQ treatment, while the canine cell lines were the

least sensitive. A dose of 25 mM of TQ induced apoptosis of osteosarcoma cells 6h after

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treatment. This dose also decreased the number of cells in S-phase and increased cells in

G1-phase, indicating cell cycle arrest at G1. These results suggest that TQ induces cell

cycle arrest and apoptosis in cancer cells (Shoieb et al., 2003). The growth- inhibitory

effects of TQ against colon cancer cells were found to be mainly due to the ability of this

compound to induce G1 cell cycle arrest and apoptosis. The apoptotic effects of TQ are

modulated by Bcl-2 protein and are linked to and dependent on p53 (Gali-Muhtasib et al.,

2004).

Several studies have shown that BCO and TQ retard the carcinogenic process in animals.

The active principles of black cumin seeds containing fatty acids were found to

completely inhibit the Ehrlich ascites carcinoma in mice (Mansour and Tornhamre,

2004). A dose of 100mg/kg body weight (b.w.) of black cumin extract delayed the onset

of papilloma formation and reduced the mean number of papillomas per mouse (Ali and

Blunden, 2003). Interperitoneal administration of black cumin (10mg/kg b.w.) 30 days

after subcutaneous administration of 20-methylcholanthrene-induced soft tissue sarcoma

restricted tumer incidence to 33.3% compared to 100% in methylcholanthrene-treated

controls (Ali and Blunden, 2003). In vivo Ehrich ascites carcinoma tumer development

was completely inhibited by the active principle at the dose of 2mg per mouse per day for

10 days (Shoieb et al., 2003). Furthermore, BCO was reported to possess a protective

effect on chemical-induced carcinogenesis in hamster cheek pouch (Wortthen et al.,

1998). In another study, the administration of a dose of 1mg of TQ twice weekly for 4

weeks demonstrated powerful chemo-preventive effects against benzo (α) pyrene (BP)-

induced for stomach tumors (Badary et al., 1999). TQ inhibited both BP-induced for

stomach tumor incidence and multiplicity by 70% and 67%, respectively. More recently,

this same group (Badary and Gamal El-Din, 2001) demonstrated that the administration

of 0.01% of TQ in drinking water 1 week before and after 20-methyl-cholanthrene

treatment significantly inhibited fibrosarcoma tumor incidence and tumor burden by 43%

and 34%, respectively. Moreover, TQ delayed the onset of methylcholanthrene-induced

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fibrosarcoma tumors that appeared at 12 weeks and produced less methylcholanthrene-

induced mortality. The possible modes of anticarcinogenic actions of TQ in the above

two studies were suggested to be through its antioxidant and anti-inflammatory activites,

coupled with enhancement of detoxification processes.

In a stady, the effect of CC-5 (ethyl acetate fraction of BCO) was evaluated for its in vivo

antitumor activity against intraperitoneally implanted murine P388 leukemia and

subcutaneously implanted Lewis lung carcinoma cells in BDF1 mice (Kumara and Huat,

2001). At doses of 200 and 400 mg/kg b.w., the fraction prolonged the life span of these

mice by 153% compared to DMSO-treated control mice. The antitumor activity of a 21-

day treatment CC-5 against subcutaneously implanted LL/2 was tested and found to

produce a 60 - 70 % tumor inhibition rate. A triterpene saponin was isolated from the

CC-5 fraction and identified to be α-hederin. This compound was found to exert more

potent anticancer effects compared to the commonly used anticancer drug, cyclo-

phosphamide. When α-hederin was given at doses of 5 and 10 mg/kg b.w. to mice with

formed tumors, it produced significant dose-dependent tumor inhibition rate values of

50% and 71%, respectively, on day 15, compared to 42% on day 15 in the

cyclophosphamide (CP)-treated group. The underlying mechanism(s) of antitumor

activity of α-hederin is not defined yet (Kumara and Huat, 2001). The protective effect of

black cumin seeds on carcinogenesis induced by methylintrosourea in Spargue Dawley

rats was recently investigated (Mabrouk et al., 2002). When given orally (0.2 g ground

black cumin seeds) alone or with honey, a 6-month treatment MNU-induced colon

adenocarcinomas by 80% ((Mabrouk et al., 2002). There was an associated elevation of

malondialehyde and nitric oxide in sera obtained from methylnitrosourea-treated animals,

which was lowered by ingestion of black cumin seeds. Interestingly, combined oral

treatment of honey and black cumin seeds protected 100% against methylnitrosourea-

induced oxidative stress, carcinogenesis and abolished the nitric oxide and

malondialdhyde elevations shown in sera of animals that did not receive these nutrients

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(Mabrouk et al., 2002). TQ has also been shown to improve the therapeutic index of

several anticancer agents and to protect non-tumor tissues from chemotherapy-induced

damage. TQ protected against ifosfamide-induced Fanconi syndrome in rats and

enhanced its antitumor activity in Ehrlich ascites carcinoma-bearing mice (Badary, 1999).

The disease Fanconi syndrome is characterized by wasting off glucose, electrolytes and

organic acids along with elevated serum creatinine and urea as well as decreased

creatinine clearance rate (Mansour and Tornhamre, 2004). It also corrected the damage

induced by ifosfamide on phosphorus, glucose, serum creatinine and urea levels and

significantly normalized creatinine clearance rate. This effective dose of TQ was found to

be very safe (Badary et al., 1998). TQ protected the kidney against ifosfamide-induced

damage through an antioxidant mechanism, since it significantly prevented ifosfamide-

induced renal glutathione depletion and lipid peroxide accumulation. Further more, mice

treated with ifosfamide in combination with TQ showed less body weight loss and

mortality rate compared to ifosfamide single therapy. Moreover, investigations by Nagi

and Mansour (2000) showed that oral administration of TQ (10mg/kg/day) with drinking

water starting 5 days before a single injection of DOX (15mg/kg) and containing during

the experimental period ameliorate the DOX-induced cardiotoxicity in rats. TQ also

protected against the nephropathy in rats associated with hypoalbuminemia,

hypoproteinemia, elevated serum urea, hyperlipidemia and a high urinary excretion of

protein and albumin. The nephropathy observed in this model resembles histologically

and clinically the focal and segmental glomerulosclerosis that occurs in humans (Zima et

al., 1997). Treatment of rats with TQ (10mg/kg per day) supplemented with the drinking

water for 5 days before (DOX), and daily thereafter significantly lowered serum urea,

serum and kidney levels of triglycerides and total cholesterol and suppressed DOX-

induced proteinuria and albuminuria (Badary et al., 2000). TQs protective effects against

DOX damage to the heart and kidney was found to be mainly due to its superoxide

scavenging and antilipid peroxidation effects.

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1.4.1.21 Anti inflammatory and immune modulatory effects:

Black cumin seeds and its derived products have been traditionally used as treatments for

rheumatism, liver diseases and related inflammatory disorders. The effects of black

cumin seed on the immune system has been investigated by several researchers

(Houghton et al., 1995, Hag et al.,1995, El-Dakhakhny et al., 2000a). all studies have

shown that the oil and its most abundant component, TQ, inhibit many inflammatory

mediators, and, thus may be useful in ameliorating inflammatory and autoimmune

conditions. Ali and Blunden (2003) reported that the black cumin-derived nigellone, the

carbonyl polymer of TQ, was very effective at low concentrations in inhibiting histamine

release from rat peritoneal mast cells in vitro. He suggested that the mechanism of action

is mainly due to the ability of TQ to decrease intracellular calcium by inhibiting protein

kinase C and partly due to its ability to inhibit oxidative energy metabolism.

Several studies pointed to the effect of black cumin on the human immune system (Ali

and Blunden, 2003 and Ramadan, 2007). The seeds of black cumin were found to

produce an increase in the ratio of helper to suppressor T cells and enhance natural killer

cell activity in normal volunteers (Tekeoglu et al., 2006). In vitro studies showed that the

crude fixed oil and pure TQ were potent inhibitors of eicosanoid generation, namely

thromboxane B2 and leucotriene B4, by inhibiting both cyclooxygenase and

lipoxygenase, respectively (Houghton et al., 1995). Thromboxane B2 has been implicated

in the mechanism of hepatocyte plasma membrane bleb formation, which is an early

event in hepatocyte injury when exposed to oxidative stress (Ali and Blunden, 2003). In

another study, black cumin seeds enhanced the production of IL-3 by human

lymphocytes and had a stimulatory effect on macrophages (Haq et al., 1995). Besides, the

immune-modulatory effect of black cumin purified proteins was found in mixed

lymphocyte cultures and caused increased secrection in the levels of the cytokines IL-Ib

and IL-8 (Haq et al., 1999). Moreover, the fixed oil of black cumin increased the release

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of PGE2, inhibited the release of leukotrienes and histamine from normal and sensitized

rat‘s lungs. Other pieces of evidence include the inhibition of TNF-a production in

murine septic peritonitis by TQ (El-Dakhakhny et al., 2000) and the unique

immunomodulatory properties of ethyl acetate (CC-5) fraction of black cumin at non-

cytotoxic doses (Swamy and Tan, 2000). The ability of TQ to modulate cytokines and

enhance the immune system has been implicated as the main reason for its protective

effect against schistosome egg infection in the liver (Mahmoud et al., 2002).

In an attempt to determine the immunomodulatory role of TQ, the effect of this

compound on the production of nitric oxide (NO) by rat peritoneal macrophages was

investigated. It was found that it reduced production of NO in supernatants of

lipopolysaccharide- stimulated macrophages without affecting the cell viability. The

protein and mRNA levels of inducible nitric oxide synthase in peritoneal macrophages

were also decreased by TQ. Immunofluorescence staining of inducible nitric oxide

synthase in macrophages showed decreased immune-reactivity for inducible nitric oxide

synthase after TQ treatment. The anti-inflammatory effects of black cumin have been

found to be comparable to that of 100mg/kg aspirin (El-Mahmoudy et al., 2002).

1.4.1.22 Antioxidant and hepatoprotective effects:

Health food stores sell black cumin seeds as natural remedy for a variety of complaints

including liver diseases (Kruk et al., 2000). The hepatoprotective effects of TQ have been

well documented and have been found to be related to its strong antioxidant potentials. In

fact, the antioxidant and free radical scavenging properties of many plants have been

found to play an important role in their hepatoprtective activity (Thabrew et al., 1995).

Oxidant stress can increase the susceptibility to irreversible injury by free radicals that

can result in lipid peroxidation, protein oxidation, protein inactivation, disturbance in

calcium homeostasis and consequent loss of cell viability (Kruk et al., 2000).

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The oil of black cumin and TQ are known to possess strong antioxidant activities (Nagi

and Mansour, 2000, Meral et al., 2001, El-Dakhakhny et al., 2002a and Mohmoud et al.,

2002), TQ has been shown to inhibit non-enzymatic peroxidation in ox brain

phospholipid liposomes (Houghton et al., 1995) with a potency that is 10 times higher

than BCO. Using TLC screening methods, Burits and Bucar (2000) showed that TQ and

BCO components, namely, carvacol, t-anethole and 4- terpineol possess strong radical-

scavenging properties. Moreover, TQ showed extremely high superoxide anion radical-

scavenging abilities in pure chemical systems (Nagi and Mansour,2000). This high

scavenging power of TQ was responsible for its protective effects against DOX induced

cardiotoxicity in rats (Nagi and Mansour, 2000).TQ was observed to be metabolized by

liver DT diaphorase to dihydrothymoquinone, a phenolic metabolite that acts as a radical

scavenger and inhibits lipid peroxidation in vitro (Mansour et al., 2002). The most

comprehensive evidence on the antioxidant effects of BCO and its components came

from the studies conducted that TOH, TQ and TQ2 exhibit antioxidant properties and

acted as scavengers of various reactive oxygen species. TOH, for example, acted as 1O2

quencher, while TQ and TQ2 showed superoxide dismutase- like activity removing O.

El-Dakhakhny et al.(2002a) also showed that BCO as well as nigellone and TQ exert

inhibitory actions on the production of leukotriene- type mediators of inflammation in

vitro. The high antioxidative action of BCO and its components suggests their importance

for the treatment of various diseases occurring with participation of reactive oxygen

species. Hepatoprotective effects of TQ were also documented against carbon

tetrachloride- induced toxicity (Mansour et al,. 2004). Similar hepatoprotective effects in

the same system were obtained following a 4-weeks oral intake of BCO in male albino

rats (El-Dakhakhny, 2003). It was shown that black cumin seeds given orally every day

for 2 months decreased the lipid peroxidation, increased the antioxidant defense system

and prevented the lipid peroxidation- induced liver damage in experimentally induced

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diabetic rabbits (Meral et al., 2001), suggesting that the seed may be used in diabetic

patients to prevent lipid peroxidation.

1.4.1.23 Toxicity of Nigella sativa:

The toxicity properties of TQ and THQ were investigated in male rats whereby the drugs

were dissolved in propylene glycol, injected into 30 male rats and LD50 determined

(Vuorelaa et al., 2004). The oral administration of aqueous extracts of the seeds of black

cumin for 14 days has been shown to cause no toxicity symptoms in male Sprague-

Dawley rats (El-Mahady et al., 2005). The safety of consuming black cumin seeds was

also reported by Al-Homidan et al. (2002) whereby the seeds did not affect the growth of

7-day-old Hibro broiler chicks when fed black cumin seeds at 20 and 100 g/kg of the diet

for 7 weeks.

Although several studies have reported the safety of consuming black cumin seeds, a

recent comprehensive investigation has shown that the plant is relatively unsafe if

consumed for prolonged periods of time (Zaoui et al., 2002b). Treatment of animals with

a daily oral dose of 1ml/kg b.w. of BCO for 12 weeks resulted in significant slowdown of

the body weight in black cumin- treated animals compared to untreated control animals.

Changes in key hepatic enzymes levels and histopathological modifications (heart, liver,

kidneys and pancreas) were not observed in rats treated with black cumin after 12 weeks.

However, the serum cholesterol, triglyceride and glucose levels and the count of

leukocytes and platelets decreased significantly, compared to the control values, while

Hematocrit and Hemoglobin levels increased significantly. The decrease in body weight

in black cumin treated rats was thought to be related to the decreased in serum lipids and

glucose levels as a consequence of a possible reduction in food intake by BCO

administration (Zaoui et al., 2002b).

1.4.1.24 Actions on high risk groups :

The seed generally safe in pregnancy, lactation & for children but its volatile oil advised

to be avoided in pregnancy (Gilani et al., 2001).

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Table 1.5 Methods of N.sativa application for treatment of diseases:

Disease and

condition

Methods of application

Acne Half a teaspoon of oil in bowl of hot water, vapour bath with a

towel over head.

Asthma & cough Rub the back and chest with oil, drink one tsp after weab a

towel 3 times a day.

Cold & flu 1tsp of oil, three times a day. Drink hot lemon with honey.

Lethargy 1tsp of oil with orange juice for 10 days.

Nervous tension ½ tsp oil with herbal tea like lemon balm, clary sage, passion

flower, st.Johns Wort.

Healthy

complexion

Rub ½ tsp oil all over face; wash with cold water.

Tired leg,

muscles,etc

Massage on affected area.

Backache,

arthritis, bruises

and rheumatism

Heat oil slightly and massage intensely. Drink 1tsp oil with 1

tsp olive oil 3 times a day.

High blood

pressure

Drink 1tsp in any hot drink; take 2 lobes of garlic before

breakfast.

Stomach

complaint

Drink mint tea with lemon and take 1tsp oil three times a day

or until relieved.

Diarrhea 1tsp oil with a cup of yoghurt. Take 2 times daily. Also eat

boiled rice with yogurt.

Hair loss Stroke the scalpe thoroughly with lemon, leave for 15 minutes

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then wash and dry, apply ½ -1 tsp oil.

Headache Rub the forehead and sides of the head and the part of the face

near the ear with the oil. Drink ½ tsp of oil after a meal 3 times

aday.

Earache Mix ½ tsp oil with ½ tsp olive oil, warm and then drip drops

into the ear and cover the ear with a woolen shawl or hat.

Intestinal

parasites

Take one tsp oil with ―warm wood‖ capsules. Eat plenty of

onions and garlic.

Colic (babies) Warm oil in hand, massage the whole abdomen with it,

stroking clockwise.

Sinusitis Inhale through nose with vapour bath, take 1tsp daily in

chronic cases, 3 times daily in acute cases.

Skin fungus Affected area with cider vinegar, then apply oil, repeat if

necessary.

1.4.2Mycetoma (=Madura Foot):

1.4.2.1Characteristics:

Chronic localized subcutaneous infection that involves underlying bone later in the

disease course.

- The lesions are multiple abscesses.

- Main symptoms/signs are cold swelling of the affected site (tumefaction),

formation of sinuses that drain pus to the surface of the skin, and presence of

grains.

- Grains are granules (small colonies), about 1-2 mm diameter, of the etiologic

agent with different color.

- The commonly affected site is the foot; however, it can be in leg, thigh, arm,

shoulder, or head.

- Infection is acquired following trauma to the skin by plant material from trees,

shrubs, or vegetation debris. Thus more seen in rural areas (in farmers,

Sheppard‘s, walking bare-foot in agricultural land or city parks)

- ―Madura foot‖ referring to the first case seen in ―Madura‖ region of India which

was in the foot of that patient.

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- Infection is very chronic takes months to be fully established and years to deal

with. It is not contagious. More seen in tropics and subtropics.

- Etiologies are Fungi which cause eumycotic mycetoma (Eumycetoma) or

actinomycetes which cause actinomycotic mycetoma ( actionmycetoma ). Their

natural habitats are plant materials (Rippon .,1988).

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Fig 1.13 Mycetoma infections

1.4.2.2 Epidemiology:

Mycetoma has a worldwide distribution, which is, however, extremely uneven.

Mycetoma is endemic in tropical and subtropical regions and the African continent seems

to be the area of the highest prevalence (Figure 1.14). Worldwide, mycetoma prevails in

the mycetoma belt that stretches between the latitudes of 15° South and 30° North

(Boiron et al 1998 and Magana,.1984). The belt includes Sudan, Somalia, Senegal, India,

Yemen, Mexico, Venezuela, Columbia, Argentina and other countries (Magana, 1984,

Mahgoub,. 1973, Mariat, 1963). In Africa, mycetoma is most frequently seen in Sudan,

Senegal, Mauritania, Kenya, Niger, Nigeria, Ethiopia, Chad, Cameroon, Djibouti and

Somalia

(Abbott,. 1956, Agarwal., and Mathur 1985, Basset et al 1965, Cameron et al., 1973,

Develoux et al., 1988, Develoux et al., 1995, Lynch, 1964, and Singh, 1978). Lynch in

1964 gave an estimation of 300 - 400 new cases per year in Sudan.

It has been extensively reported in India (Bocarro, 1909, Singh, 1978). There were

reports on mycetoma from the United States, Ceylon, Germany, Egypt, Turkey,

Philippines, Japan, Lebanon, Thailand, Iran, The Netherlands and Saudi Arabia (Corray,

1962, de Hoog,et al., 1993 , El Mofti et al., 1965., Gammel, 1927, Erbakan et al., 19730,

Tight and Bartlett 1981).

Areas where mycetoma prevails are relatively arid with a short rainy season of 4-6

months. Rainfall is50 to 1000 mm per year, with a relative humidity of 60-80% and fairly

constant temperatures of 30- 3rC for 24 hours a day. This is followed by a dry season of

6-8 months with a relative humidity of 12- 18%, day temperatures rising to 45-60°C.

Temperatures may fall to 15-18°C during the night (Mahgoub and Murray 1973). This

alteration in extreme weather conditions may be a prerequisite to the survival of the

causative organism in its natural niche.

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Geographical distribution of the mycetoma causative agents shows considerable

variations, which could be explained on these and other environmental factors, especially

the rainfall (Mariat, 1963). Many microorganisms are capable of causing mycetoma. The

most prevalent etiological agent of eumycetoma worldwide is Madurel/a mycetomatis

(McGinnis, 1996). Most of the mycetoma cases in Africa are eumycetoma caused by M.

mycetomatis. In some parts of central Africa, including Sudan, M. mycetomatis causes

more than 70% of all mycetoma infections (Gumaa, 1994).

Fig 1.14 Map showing the geographical distribution of some eumycetoma agents

(Gumaa, 1994).

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Fig 1.15 Map showing the geographical distribution of mycetoma in sudan (Gumaa,

1994).

1.4.2.3Etiology:

1.4.2.3.1Eumycetoma:

- It is caused by several mold fungi.

- The color of grains in this type of mycetoma is black or white.

- Fungi include: Madurella, Pseudallescheria (Scedosporium), Pyrenochaeta

(Pycnidia producer), Acremonium, and the ascomycetes Leptosphaeria and

Neoteatudina, others (larone, 2002).

- The common etiologies in Saudi Arabia and neighboring

countries are :

o Madurella mycetomatis causes the majority of the cases with black

grains. It is imperfect dematiaceous mold with brown colonies and

diffused hony – colored pigment. Produces phialoconidia from phialides,

and chlamydospores.

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Fig 1.16 Madurella mycetomatis colonies

o Madurella grisea :Another species of Madurella, similar to M.mycet. but

with grey colonies.

o Pseudallescheria boydii – causes white grain mycetoma. It is

Ascomycete mold forming cleistothecia and ascospores. The imperfect of

it is the moniliaceous mold: Scedosporium apiospermum which forms

annelloconidia from annelids.

Fig 1.17 Pseudallescheria boydii colonies

1.4.2.3.2Actinomycetoma:

Caused by about 10 species of aerobic actionmycetes.

o Color of grains yellow, white, yellowish-brown. Pinkish-red.

o Actinomycetes are filamentous higher bacteria. The filaments (very thin

about 1.0µm wide) appear as long branching, beaded, or as long rods.

They are Gram-positive (Rippon, 1988).

o Main etiologies:

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Streptomyces somaliensis – causes the majority of the cases –

color of grains yellow to yellow - brown.

Actinomadura madurae – white or yellow grains.

Actinomadura pelletieri – pinkish-red grains.

Nocardia brasiliensis - white grains.

N.asteroides, N.caviae, N.coeliaca –white or yellow grains.

Latter species of Nocardia usually cause Nocardiosis (which is

subcutaneous, pulmonary, or brain abscess infection).

Nocardia is acid-fast to partially acid fast when stained by Ziehl-

Nelsen stain (ZN) while Streptomyces and Actinomadura are

nonacid-fast.

o These actinomycetes are differentiated by their decomposition pattern of

gelatin. Also by few other biochemical tests and colony morphology

(They have adherent dry colonies). See Table of characteristics.

o The anaerobic actinomycete ;Actinomyces israelii causes the infection:

―Actinomycosis‖ which is subcutaneous, cervicofacial, pulmonary,

abdominal, uterine, or brain abscess infection. It also causes dental caries.

The organism is filamentous and will have yellow grains ( sulfer

granules) (McNeil & Brown, 1994).

Table 1.6 Characteristics of the main species of the Actinomycetes:

(McNeil & Brown, 1994).

Organism Ca Ty Xa Hx Urea Growth in

0.4X salt

Gelatin Colony

S.somaliensis + + - - - - + Brown

A.madurae + + - + - + + Brown

A.pelletieri + + - + - + Brown

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N.brasiliensis + + - + + + Orange

N.asteroides - - - - + - White

Decomposition of Ca=Casien, Ty=Tyrosine, Xa=Xanthine, Hx=Hypoxanthine

1.4.2.4laboratory Diagnosis:

1.4.2.4.1Specimen:

Visible grains, Biopsy tissue (not skin pinch), curetting of sinuses, pus, blood for

serology.

- First determine color of grains – it helps identify etiology and initiate treatment.

- Make histologic section, or grinde tissue and crush grains and make smears –

stain by: Hematoxylin –Eosin, Gram, ZN; if fungi do 20% KOH or periodic

acid Schiff stain.

- Extract serum for serology (Isenberg , 2004).

1.4.2.4.2Direct Microscopy:

- Will reveal grains in tissue ;

o Homogenous texture = actinomycetes.

o Heterogenous texture = fungi.

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Fig 1.18 Comparison between Actinomycotic & Eumycotic grain

- Actinomycete grains = will not reveal filaments easily.

- Fungal grains = will contain easily seen hyphae and chlamydospores.

- Grain will have different morphology and color (White, black, yellow,

pink….etc) depending on etiology.

Table 1.7 The color of the grains in mycetomas & related

species(Mahgoub, 1973):

Color of grains Species

Eumycetoma

black grains

M. mycetomatis, M. grisea, Leptospheria senegalensis,

Exophiala jeanselmei, P.romeroi, C.lunata, Phialophora

verrucosa, P. parasitica

Eumycetoma

pale grains

P.boydii, Aspergillus nidularis, A. flavus, Fusarium Sp,

Acrimonium Sp, Neotestudina rosatii, dermatophytes

Actinomycetoma

red grains

Actinomadura pelleitieri

Actinomycetoma

yellow grains

streptomyces somalinsis

Actinomycetoma

pale grains

N. brasiliensis, N. cavae, N. asteroids, Actinomadura

madurae

- Direct microscopy of specimen from Nocardiosis and actinomycosis will show

branching thin filaments by silver stain (Isenberg, 2004). .

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Fig 1.19 Actinomycete & Nocardia filaments

1.4.2.4.3 Culture:

On sabouroud dexterose agar(SDA), Neutral- Sabouroud dexterose agar,Brain

Haert Infusion-Agar(BHI-A), Blood agar and incubate at 37˚C and at 25-30˚C

aerobically.

- For actinomycosis also culture on cooked meat medium and incubate

anaerobically at 37˚C.

- The organisms will grow slowly and may be contaminated with skin flora –

purify – identify.

( Koneman and Roberts,1985)

Fig 1.20 Actinomycete filaments from culture

1.4.2.4.4 Serology:

- Test for antibody using known antigen from each etiologic agent.

- Methods used immunodiffusion (I.D), and/or

counterimmunoelectrophoresis ( C.I.E). (Anaissie et al., 2003).

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1.4.2.5 Management:

- Usually actinomycetoma respond better to treatment than eumycetoma.

- Generally if bone is infected the response to treatment is poor (Mahgoub,

1994).

Actinomycetoma:

- Trimethoprim – Sulfametoxazol (Cotrimoxazole/septrin) + Streptomycin

sulfate (Mahgoub,1972) .

- Or : Dapsone + Streptomycin sulfate.

- Or : Doxycycline + Cefachlor.

- For Actinomycosis : Penicillin G

Actinomycetoma is amenable to medical treatment with antibiotics and other

chemotherapeutic agents. Combined drug therapy is always preferred to a single

drug to avoid drug resistance and to eradicate residual infection. The common

drugs in use include combination of:

a. Streptomycin sulphate (14 mg/kg daily), Diaminodiphenyl sulphone

(Dapsone) (1.5 mg/kg twice daily).

b. If there is no response for few months or if there is persistent side effect then

dapsone is replaced by Co-trimoxazole (14 mg/kg twice daily).

c. Amikacin sulphate alone or in combination with Co-trimoxazole

d. In resistant cases other drugs such as Rifampicin, Sulfadoxine-

pyrimethamine (Fansidar) and Sulphonamides

(Mahgoub, 1976) (Mahgoub, 1994) (Mahgoub, 1972) (Welsh et al, 1987) .

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All drug of antifungal Induced Nephrotoxicity and the most common factors that

have been identified in retrospective studies of nephrotoxicity include:

a) Baseline renal dysfunction.

b) Previous or concurrent administration of nephrotoxic agents (i.e.

Cyclosporin, Aminoglycosides)

c) Prolonged therapy with high dosages of (i.e. treatment for invasive fungal

infection).

d) Underlying disease state associated with renal dysfunction (i.e. diabetes,

sepsis).

) Luber et al,.1999) , ) Wingard et al,.1999)

Fig 1.21 Schematic Representation of the Balance between Amphotericin B-

Induced Nephrotoxicity, Patient Risk Factors, and Cost Effective Therapy(

Luber et al,.1999, Wingard et al,.1999):

Eumycetoma:

- Ketoconazole(Nizoral) tablets or Itraconazol or voriconazole

(Mahgoub, 1984) .

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If drugs not effective and bone is infected = Amputate the limb or

debride tissue and continue treatment.

Treatment duration is long – up to many years.

All drugs have two costs. In addition to their acquisition costs, cost of

monitoring and treatment of side effects must also be considered. These

secondary costs are especially important with antifungal agents. Those invasive

fungal infections are also one of the most expensive complications that can be

encountered in hospitalized patients. Until recently, studies examining the

pharmacoeconomics of antifungal therapy were a low priority, as few antifungal

therapies were available and costs related to antifungal acquisition and

administration appeared (Rentz et al., 1998)

Figure 1.22 Antifungal drugs overall average cost in 1993

(Rentz et al., 1998):

1.4.2.6 Detailed Descriptions for most common microorganisms:

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1.4.2.6.1Madurella mycetomatis

Pathogenicity: Causes black grain mycetoma (larone, 2002) .

Rate of

growth:

Moderate at 37˚C; mature in 10 day. Grows much more slowly

at 25˚C.

Colony

morphology:

Varies greatly; may be smooth or folded and glabrous or

powdery and ranges in color from white to yellowish brown.

There is usually a brown diffusible pigment in the agar . reverse

is dark brown.

Microscopic

morphology:

On sabouroud dexterose agar forms only septate hyphae (1-6µm

in diameter ) with numerous chlamydoconidium –like enlargwd

cells. On cornmeal agar , some strains produce phialides that

bear round or oval conidia at their tips.may form large, black

masses of modified hyphae ( sclerotia) in old cultures.

M.mycetomatis differs biochemically from Madurella grisea in

assimilating lactose but not sucrose.

Fig 1.23 Microscopic morphology of Madurella mycetomatis

1.4.2.6.2 Pseudallescheria boydii (sexual state); Scedosporium

apiospermum(asexual state)

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Pathogenicity : Has been known for many years to cause mycetoma .The

infection occurs most often in the feet or hands but may

occur on any exposed parts of the body.this organisem is

now also recognized as an agent of phaeohyphomycosis. It

can infect the subcutaneous tissue, bones, brain, eye, lungs,

sinuses, meninges, and other body sites. Disseminated

infection has been reported in immunocompromised patients

(larone, 2002).

Rate of growth: Moderately rapid; mature in 7 days. The sexual stage

(P.bodydii) is inhibited by cyclohexamide, the asexual stage

(S.apiospermum) is not inhibited.

Colony

morphology:

Surface has a spreading, white, cottony aerial mycelium

which later turns gray or brown. Reverse is at first white but

usually becomes gray or black.

Microscopic

morphology:

Hyphae are septate (2-4 µm in diameter ), with simple long or

short conidiophores bearing coninda singly or in small

groups ( may resemble mould phase of Blastomyces

dermatitidis, the conidia (4-7 x 5-12µm) are unicellular and

oval, with the larger end to ward the apex, and appear cut

off at the apex, and appear cut off at beas (i.e.,truncate);they

become dark with age, the grapbium type of a sexual

conidiation is seen occasionally; it is characterized by long,

erect, narrow conidophores that are cemented together,

diverge at the apex, and bear clusters of oval, truncate

conidia (2-3 x 5-7µm). in the sexual stage, large brown

cleistotheca (50-250µm in dimeter) are formed and release

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elliptical ascospores when ruptured. The sexual stage may

sometimes be induced by culturing on corn-meal agar or

potato dextrose agar; the cleistothecia are most likely to

form in the center of the colony .

Fig 1.24 Microscopic morphology of Pseudallescheria boydii (sexual state);

Scedosporium apiospermum(asexual state)

1.4.2.6.3Nocardia spp.:

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Pathogenicity : Cause nocardiosis, which symptomatically may be similar to

tuberculosis or actinomycosis. Disease may begin as a

pulmonary infection and later involve the central nervous

system, kidneys, and other organs. Skin lesions or

subcutaneouse abscesses may be the only manifestation of

infection; occasionally mycetomas develop in the extremities.

on rare occasions, the eye has been infected. The organisms

are ubiquitous in nature and may therefore be encountered as

contaminants or colonizers.

Rate of growth: Moderately rapid; mature in 7-9day. Optimal growth is at 35-

37c. Grow on sabouraud dexterose agar (SDA) without

antibiotics and also on Lowenstein –Jensen (LJ ) and

middlebrook 7H11 media ( frequently survive

decontamination procedures used for isolation of acid- fast

bacilli). Excellent recovery has been reported on nonselective

buffered charchoal yeast extract (BCYE) agar and also on

Thayer-Martin agar (especially useful for inhibiting other

organisms in mixed cultures) (larone, 2002).

Colony

morphology:

Grow aerobically on SDA without antibiotics, forming raised,

irregular, folded colonies varying from white to orange,

depending on the species. May be glabrous or develop a white

chalky coating.

Microscopic Delicate, branching, often beaded, intertwining filaments that

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morphology: fragment into bacillary and coccoid forms; best exhibited on

slide culture using a minimal medium, such as cornmeal-

Tween 80agar. They are gram positive and often, but not

always, partially acid fast (use a modified kinyoun method).

Young primary cultures are usually the most acid fast; acid

fastness may be enhanced on middlebrook 7H11 medium or

by growing cultures for 3-4 weeks in a proteinaceous medium,

such as litmus milk or bromocresol purple milk.

Fig 1.25 Microscopic morphology of Nocardia spp.

1.4.2.6.4Streptomyces spp.

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Pathogenicity: Most streptomyces spp. Are considered nonpathogenic

contaminants. Other species, such as S.somaliensis, cause

mycetomas and occasionally appears to be an etiologic agent of

infection.

Rate of

growth:

Rapid or moderate; mature in 4-10days. Optimum growth

occurs at 30c.

Colony

morphology:

Surface is slightly folded, hard, and leathery; may develop a

fine chalky or powdery aerial mycelium. Many strains have

various pigments of gray, orange, rose, red, or occasionally

green. Culture often produces the characteristic odor of freshly

tilled soil (larone, 2002).

Microscopic

morphology:

Hyphae are long, thin (1µm or less in diameter), and abundantly

branching, with filaments which may be straight, wavy, or

spiral. Small oblong conidia are produced at distinct points on

the filament; this is best observed on slide culture. Some

species do not form conidia readily.

Fig 1.26 Microscopic morphology of Streptomyces spp.

1.4.2.6.5Actinomadura spp.

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Pathogenicity : A frequent cause of mycetoma. They have also been isolated

from sputum, wounds, blood, and other sites, suggesting the

ability to colonize or infect some patients.

Rate of growth: Usually rapid on Lowenstein-Jensen (LJ) medium; slower on

Sabouraud dexterose agar (SDA). Optimum growth is at 35-

37c.

Colony

morphology:

Waxy, folded, membranous, or mucoid. May be white, tan,

pink, orange, or red. White aerial hyphae may develop after 2

weeks of incubation; best seen on LJ medium(larone, 2002).

Microscopic

morphology:

Narrow abundantly branched filaments (0.5-1µm in diameter )

that are gram positive, non-acid fast, and nonfragmenting.

Short chains of round conidia may be produced from limited

portions of the aerial hyphae; this is best observed on slide

culture.

Fig 1.27 Microscopic morphology of Actinomadura spp.

Table 1.8 Differentiation of aerobic Actionmycetes: (larone, 2002).

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1.4.2.7 Detailed Descriptions for disease:

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1.4.2.7.1Actinomycosis:

Etiologic

agents:

Actinomyces israelii (in human), Actionmyces bovis (in animals),

and other Actinomyces spp.; occasionally Arabnia, Rotbia, and

Eubacterium spp. (larone, 2002)

Sites of

Infection :

Neck and face area, lung, thoracic cavity, abdomen, pelvis,

multiple systemic sites.

Tissue

reaction :

Typically suppuration with abscesses containing granules

composed of the bacterial filaments. The innermost portion of the

wall of the abscess sometimes contains foamy macrophages.

Palisading epithelioid macrophages and giant cells often surround

the abscess and may be encapsulated by fibrosing granulation

tissue. Splendore-Hoeppli material usually radiates around the

abcesses. Sinus tracts connecting the absesses or opening to the

body surface are common.

Morphology

of

organism:

Granules from an abscess or draining sinus tract are 30 - 3000µm

or more in dimeter and are commonly called ―sulfur

granules‖.when crushed, the granules appear microscopically as

opaque masses with peripheral, gelatinous, club-shaped bodies.

The granules are composed of numerous delicate (less than 1µm

in diameter) bacterial filaments that branch and may exhibit

beading. In some instances, only small groups of branching

filaments form instead of the characteristic granules. The

organisms are gram positive and nonacid fast; they stain well with

GMS and Giemsa stains but not with H&E, PAS, and Gridley

fungus. Other anaerobic bacteria may also be present. Branching

filaments of Nocardia are partially acid fast.

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Fig 1.28 organism morphology of Actinomycosis

1.4.2.7.2Mycetoma (Actinomycotic or Eumycotic ):

Etiologic

agents :

Actinomycotic: Nocardia spp, Actinomadura spp, Streptomyces spp.

Eumycotic:Pseudallescberia boydii, Madurella spp, Exophiala

jeanselmei, Acremonium spp, Fusarium spp, Curvularia spp, and

occasionally other moulds (larone, 2002).

Sites of

infection :

Subcutaneous tissue and skin; long-standing infections may ivolve

muscle, fascia, and bone. The infection is most commonly on lower

leg or foot, rarely disseminated.

Tissue

reaction :

Similar reaction are seen with all mycetomas, i.e., both

actinomycotic and eumycotic. Multiple draining sinus tracts with

neurophilic abscesses containing granules and necrotic debris are

characteristic. The abscesses and sinus tracts are surrounded by

chronic inflammation consisting of palisading epothelioid

macrophages, multinucleated giant cells. Lymphocytes, and plasma

cells. Between the abscesses is granulation tissue that is usually

vascular and contains many inflammatory cells. Splendore-Hoeppli

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material very often surrounds the granules. Fibrosis may occur in

long-standing infections.

Morphology

of

organism :

The etiologic agent typically organizes into aggregates in infected

tissue to form granules ranging in size from 25µm to 5µm.

-Actinomycotic Mycetoma: Granules (White, yellow, or red) are

composed of narrow (1µm or less in diameter) interwined filaments

that are radially oriented and most numerous at the edge of the

granule. Nocardia spp. Are usually at least partially acid fast, while

Actinomadura and Streptomyces spp. Are not acid fast.All are gram

positive and stain well with GMS and Giemsa, but not with H&E,

PAS, or Gridley fungus.

-Eumycotic Mycetoma: Granules (white, yellow, browen, or black)

contain septate, variously shaped, somewhat distorted hyphae (2-

6µm in diameter) that are often accompanied by numerous

chlamydoconidia and swollen cells; the fungal forms are most

commonly visible at the periphery of the granule.

Fig 1.29 organism morphology of ( Actinomycotic or Eumycotic )

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1.4.2.7.3Nocardiosis

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Etiologic

agents:

Nocardia asteroids (most common), Nocardia brasiliensis,

Nocardia otitidiscaviarum (formally Nocardia caviae), and

rarely other Nocardia spp. (larone , 2002).

Sites of

infection:

Lung, central nervous system, skin and subcutaneous tissue,

multiple systemic sites.

Tissue

Reaction:

Generally, the reaction is suppurative, sometimes

necrotizing. Poorly defined, variably encapsulated abscesses

may form. Occasionally, granulomatous tissue is seen in

chronic infections. The Splendore-Hoeppli phenomenon is

rare in Nocardia infections.

Morphology

of organism:

Delicate, narrow (0.5-1.0µm in diameter) filaments that tend

to branch at right angles; coccobacillary elements may also

form branched that they have been described as resembling

‖Chinese letters‖. They are partially acid fast when stained

with the modified Kinyoun stain or other acid fast stain

using a weak acid solution for decolorization. The

organisms are gram positive and stain well with GMS,

especially when the staining time in the silver nitrate

solution is increased; they do not reliably stain with H&F,

PAS, or Gridley fungus.

Fig 1.30 organism morphology of Nocardiosis

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Table 1.9 The main clinical differences between eumycotic and actinomycotic

mycetoma: (Mahgoub, 1994).

Eumycetoma Actinomycetoma

Causative agents Fungi Bacteria

Lesion

characteristics

Well-encapsulated with a clear

margin

Diffuse, no clear margin

Sinuses Relatively few Many

Color of grains Different colors, but mostly

white or black

Different colors, other than black

Course of

infection

Slowly progressive More inflammatory and rapid

progression

Bone invasion After a long time Rapid

Cavities in X-ray Small in number, but large in

size with clear margins

Numerous, small in size (except

in case of Actinomadura

madurae) with unclear margins

Management

Drug of choice Ketoconazole

ltraconazole

Dapsone + streptomycin

Rifampicin or fansidar

Amikacin + cotrimoxazole

Management of

choice

Both medical and surgical

intervention required

Only medical treatment is

sufficient (in some advanced

cases in combination with

surgery)

Surgery only May cure small, well-

encapsulated lesions

Up to 90% recurrence in

most cases

Not indicated

Medical

treatment only Partial cure or

improvement

Recommended before

surgery to prevent local

spread

Needed after surgery to

prevent recurrence

Useful in most of cases

Most successful

outcome

Early diagnosis followed by

adequate antifungal treatment

in combination with surgery

Early diagnosis followed by

medical treatment for a

sufficiently long period

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2.1 Materials:

2.1.1 Nigella sativa Origin:

The seeds were purchased from Qasiem garden and authenticated by (Roby marry

in King Khalid hospital lab)

Table 2.1 Instruments:

Instrument Model No Serial No Company Country

Incubator lib- 080M 07083144 prime company khartom

/sudan vertical Autoclave - 7421st.JF.190 Medica

instrumentMFG.Co

Autoclave H86613AC1 2521993-101-

01

Hot air oven LDO-080N 07083131 prime company khartom /

sudan Sensitive Balance kern 440-33N - prime company khartom /

sudan Sensitive Balance TE601&Sec:BL 23603172 Sartorius

Colony counter - - prime company khartom /

sudan Soxhelt apparatus - - Quick Fit England

Rotatary vapour - - Buchi Switzerland

star dust - - Japan Japan

Table 2.2 Media:

Type Qty in Grams/litre of medium Code Packing

Nutrient Agar 28.00 M001-500G 500gm

Sabouraud Dextrose

Agar 65.00 M063-500G 500gm

Columbia CNA agar

base

42.50 M002-500G 500gm

Table 2.3 Solvents:-

Name Chemical

Symbol M.Wt Company Country

Distilled water - - - - Chloroform CHCL3 119.38 British drug house England

Methanol CH3OH E.Merck Germany

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2.1.2 Other materials:-

Bunsen burner.

Petri dishes.

Wire loops.

Glass ware.

Test tube.

Tips.

Cork borer (No2).

Bottles.

Cylinder.

Pipette.

Physiological saline.

Sterile swab.

Forceps.

Antipapal.

Slop holder.

Tube holder.

Para film.

Electronic pipette.

Cornal tube.

Micro filter.

Centrifuge.

Glass pit.

Electronic chaker.

Betridish.

Mixing machen.

Basintgater.

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2.1.3 Tested bacterial / fungal strains:-

Standard strains were obtained from natural culture type collection (NCTC) , England

and American type culture collection (ATCC), USA as well as specimens were collected

from patients in Sudan (SU1), (SU2) and Saudi Arbia(SA), (Pot).

The test organisms used were:

Table 2.4 Tested fungal strains (Eumycetoma):

m/o Abbrev. Code number

Madurella mycetomatis M.m(SU1) ATCC 6380

Madurella mycetomatis M.m(SU2) From pat.

Madurella mycetomatis M.m(Pot) 586/587

23/3/11

Madurella mycetomatis M.m(SA) 24/12/13

Pseudallescheria boydii

(Scedosporium)

Pseudo. ATCC27853

Madurellagrisea M.g M ¾

Table 2.5 Tested bacterial strains (Actinomycetoma):

Streptomyces

somaliensis

S.s MO7/1109

26/8/07

Streptomyces

somaliensis

S.s 442

16/11/12

Actinomaduramadurae A.m 690

5/5/97

Actinomaduramadurae A.m MO/991

21/7/5

Nocardiabrasiliensis N.b 7/3/4

24/12/13

Nocardiaasteroides N.a 16/6/98

24/12/13

(SA) Saudi Arabia sample in Sabroud dexterose agar. (Pot) Saudi Arabia sample in Potato desterose

agar. (SU1) and (SU2) Sample from Sudan in SDA.

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2.2 Methods:-

2.2.1Preparation of plant extracts:- 100g of N.sativa powder was extracted by maceration using chloroform as a solvent.

Another 100g was extracted by the same method using methanol.

The solvent was evaporated with a rotary evaporator and the oil was collected.

The oil obtained from both extracts was serially diluted (0.05%, 1%, 2%, 3%, 4%, 5%,

6%, 7%, 8%, 9%, 10%) using chloroform and methanol respectively.

2.2.2 Preparations of culture media:

2.2.2.1 Preparations of Sabouraud Dextrose Agar:

1000 ml of distilled water and 1ml of anti-bubbles was added to 65g of Sabouraud

Dextrose Agar powder in glass bottle,

And was sterilized for 3 hours at 121Coin an Autoclave, then after 3 hours the media was

removed from the autoclave and was cooled for 15 minutes, 100mg of chloramphenicol

in 6ml of ethanol I was added to the media to prevent bacterial contamination without

affecting the growth of mycetoma.

15 ml of the prepared agar was transferred into sterile plastic tubes and petrie dishes and

the agar in the tubes was allowed to set in slope position.

2.2.2.2 Preparations of blood agar:

500 ml of blood agar was prepared by adding 21.25 g of Cloumbia CNA agar base to 500

ml distilled water and 3 drops of anti-bubbles was added and autoclaved for 1 hr. and 45

min., 50 ml of blood was added. 15 ml of the prepared agar was transferred into sterile

plastic tubes and petrie dishes and the agar in the tubes was allowed to set in slope

position (McGinnis, 1980).

2.2.3 Preparation of Specimens:

Specimens of exudates, pus, and drainage should be examined for granules by using a

dissecting microscope. If granules are present, the colour is noted, and then a portion of

the specimen is teased apart gently, crushed between two glass slides, and examined

microscopically; the remainder is washed several times in sterile distilled water, crushed

with a sterile glass rod, and inoculated onto appropriate media (granules may be bacterial

and should be plated accordingly). If no granules are present, the specimen is examined

microscopically for hyphae and other fungal elements and directly inoculated onto

isolation medium (larone, 2002)..

2.2.4 Inoculation or culture of media:

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Inoculation was performed in a sterile advanced safety cabinet using Sabouroud

dexterose agar and blood agar media.

The plates were inverted and the tubes were put in test tube rack and incubated

aerobically at 35-37˚C for 7 days insure the growth of mycetoma was begin and clearly

change was shown up to 21 -23 days to reach the complete growth (McGinnis, 1980).

2.2.5 Phytochemical Screening:

The methanol extracts from the defatted vegetal products may contain important groups

of natural constituents, as for example:

- Polyphenols (tannins, etc.),

- Reducing compound,

- Alkoloid salts,

- Polyphenolic glycosides (anthracenosides, coumarins, flavonosides),

- Sterol glycosides (cardiotonics, saponosiders),

- Triterpene glycosides,

- Anthocyanosides.

Very good results may be also obtained by extraction with alcohol (70-80 per cent).

2.2.5.1 Test for Carbohydrates and / or Glycosides:

The dried powdered seed (5g) was boiled with 100ml of distilled water; the aqueous

solution was filtered through a cloth of muslin and the liquid obtained was tested as

follows:

- Molishs test:

An aliquot of the filtrate (2ml) was mixed with 0.2 ml of ethanolic-naphthol

(20%) followed by 2ml of sulphuric acid (98%) poured carefully on the side of the

test tube to form two layers. A violet zone at the junction of the two layers

indicated the presence of carbohydrates.The filtrate (5ml) was heated with 5ml

fehlings solution, and a red precipitate indicated the presence of reducing sugars

(Gonalez, 1962).

2.2.5.2 Test for tannins:

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The dried powdered plant (1gm) was extracted with aqueous ethanol (50%) and tested for

tannins by the following tests:

- Addition of 1ml of ferric chloride reagent, a green blackish colour indicated the

presence of complexes Gallic tannins.

- To about 5ml of an aqueous extract 0.5g of NaH2PO4 , was added , warmed, cooled

and filtered . to the filtrate, 2ml of 2% solution of phenazone was added. Formation

of a precipitate or turbidity indicates the presence of tannins.

- Vanillin in hydrochloric acid (2ml) was added to 5ml of ethanol extract. A crimson

red colour obtained indicated the presence of condensed tannins.

- A match stick was dipped in a few ml of aqueous extract and the stick was left to

dry, then dipped again in hydrochloric acid, removed quickly and dried near the

flame , a red colour indicated the presence of condensed tannins(Gonalez,

1962)(Clauss; 1961).

2.2.5.3 Test for alkaloids and / or nitrogenous bases:

The powdered seed (10g) was extracted with acidified water and the acidic filtrate was

rendered alkaline by the addition of ammonium hydroxide solution, and the mixture

extracted with chloroform. The chloroform extract was evaporated to dryness, and the

residue was dissolved in 2ml of dilute HCL and tested with the following reagents:

Mayers, modified Dragendorffs and iodoplatinate modified reagent. A white, orange

precipitate and violet colour occurred, respectively, with the reagents, indicating the

presence of alkaloids and / or nitrogenous bases (Wall et al., 1954).

2.2.5.4 Test for flavonoids:

- Shinoda test:

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A 1ml of 10% ethanol extract of each plant was treated with 0.5ml of 10%

hydrochloric acid, then magnesium metal strips was added. A red colour developed

indicating the presence of flavonoids.

- Amyl alcohol test (for free and combined flavonoids):

A 5ml aliquot of 1% hydrochloric acid extract of the plant was shaken with 5ml of

amyl alcohol. A yellow colour in the amyl alcoholic layer indicated the presence of

free flavonoid aglycones.The aqueous layer was boiled with 10ml of concentrated

hydrochloric acid for two minutes. The acidic solution was cooled and extracted

with amyl alcohol. A brownish yellow colour indicated the presence of flavonoid

glycosides ( Fuluon, 1932)(Gessman , 1962).

2.2.5.5 Test for Saponins:

- Froth test:

The plant sample (1gm) was boiled in 10ml water for a few minutes ,filtered and

shaked. A persistent froth indicated the presence of saponins.

- Haemolysis test:

The alcohol extract of the plant (10ml) was evaporated at low temperature and the

residue dissolved in 10 ml of normal saline. The solution (10ml) was added to 10

ml of a suspension of red blood corpuscles in normal salin 1:40. Haemolysis

occurred indicating the

presence of saponins ( Harper,1939) (Habrone, 1973).

2.2.5.6 Test for unsaturated sterols:

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The dried powdered plant (1g) was extracted with few ml of ethanol , filtered and

evaporated to dryness, the residue was dissolved into two equal portions and tested as

follows:

- Libermann-burchards test:

To the first portion, 1ml of acetic anhydride was added and 2ml of concentrated

sulphuric acid along the side of the tube. a reddish violet colour at the junction of

the two layers indicated the presence of unsaturated sterols and/or triterpenes.

- Salkowiskis test:

To the second portion an equal volume of concentrated sulphuric acid was added.A

red colour was produced indicating the presence of unsaturated sterols and/or

triterpenes( Stahl .1969).

2.2.5.7 Test for Coumarins:

A small amount of moistened plant sample was placed in a test tube , the tube was

covered with filter paper moistened with dilute sodium hydroxide solution.

The covered test tube was then placed in boiling water bath for several minutes. The

paper was removed and exposed to ultraviolet light. Ayellow – green colour appearing

within a few minutes indicating the presence of coumarins (Franwarth. 1966).

2.2.5.8 Teste for Cardiac-glycoside

- (Legal's test)

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1.0 ml extract was dissolve in 5.0 ml pyridine, 2 drops 2% Sodium Nitroprusside and 2

drops 20% NaOH were added. A deep red color faded to brown indicates presence of

cardenolide.

- Kedde's test

1.0 ml extract was mixed with 1.0 ml 2 % 3,5- dinitrobenzoic acid in methanol and 1.0

ml aqueous NaOH. A violet color precipitate indicates lactone ring present in

cardenolide.

2.2.5.9 Test for Anthracenosides:

4 ml extract was concentrated to 2 ml, then ammonia solution (25 %,1-2 ml) was added

by shaking. A cherish-red colour of the alkaline solution indicates the presence of emodol

(aglycones of anthracenosides) in an oxidized form (Borntragers reaction).

2.2.6 -Methods used for screenning anti-oxidant activity:

2.2.6.1. DPPH radical scavenging assay:

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The DPPH radical scavenging was determined through use In 96-wells plate, the test

samples were allowed to react with 2.2Di (4-tert-octylphenyl)-1-picryl-hydrazyl stable

free radical (DPPH) for half an hour at 37ºC. The concentration of DPPH was kept as

(300μM). The test samples were dissolved in DMSO while DPPH was prepared in

ethanol. After incubation, decrease in absorbance was measured at 517nm using

multiplate reader spectrophotometer. Percentage radical scavenging activity by samples

was determined in comparison with a DMSO treated control group. All tests and analysis

were run in triplicate (Shimada et al., 1992).

2.2.6.2. Iron chelating activity assay:

The ferrous ( Fe+2

) were monitored by measuring the formation of ferrous ion-ferrozine

complex. The experiment was carried out in 96 microtiter plate. The plant extracts were

mixed with Ferrous Sulphate(FeSO4). The reaction was initiated by adding 5 mM

ferrozine. The mixture was shaken and left at room temperature for 10 min. the

absorbance was measured at 562 nm. EDTA was used as standard, and DMSO as control.

All tests and analysis were run in triplicate (Dinis et al., 1994).

3. Results:-

3.1 Phytochemical investigation of the seeds of Nigella sativa:

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100gm of the seeds were extracted with chloroform by maceration. Another 100gm of the

seeds were extracted with methanol by the same method and the percentage yield of the

oil was recorded in table (3.1).

Table 3.1 The percentage yield of oil extract:

Solvents Yield%v/w

Chloroform 30

Methanol 15

The methanolic extract was subjected to qualitative chemical tests and the results are

presented in table (3.2).

Table 3.2 The phytochemical screening of the methanolic extract:

Constituents Test/Reagent Observations Result Hydrolysable tannins

1- Ferric chloride Greenish brown

colour

+Ve

2- 2%solution of

phenazone

Turbidity +ve

Condensed tannins

1- Ferric chloride Greenish brown

colour

+Ve

2- Vanillin in

hydrochloric

acid

A crimson red

colour

+ve

3- Match stick Red colour +ve

Alkaloids (salt)

Mayers reagent White

precipitate

+Ve

Dragendorffs reagent Orange

precipitate

+Ve

Iodoplatinate

modified reagent

Violet colour +Ve

Quarternary bases &

oxidized amines

Mayers reagent Yellow

preciptate

+Ve

Saponins

Froth test Standing

foaming

+Ve

Haemolysis test Haemolysis

occurred

+Ve

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Carbohydrates Molishs test Violet zone +Ve

Reducing sugar Fehlig solution (|I+II) No Red

precipitates

+Ve

unsaturated sterols Liebermann

Burchards reaction

Reddish violet

colour at the

junction of the

two layers

+Ve

Salkowiskis test Red colour +Ve

Anthracenosides Borntragers reaction No colour

change

-Ve

Coumarins Ammonia +UV light Flouresence or

Ayellow – green

colour

+Ve

Flavonoid Shinoda test Red colour +Ve

Free flavonoids

(flavonoid aglycones)

Amyl alcohol test Yellow colour +Ve

Combined flavonoids

(flavonoid glycosides)

Amyl alcohol test Brownish

yellow colour

+Ve

Terpenoids Salkowiskis test No change +Ve

Cardiac Glycosides

(Cardenolide)

Keddees test violet color

precipitate

+Ve

Cardiac Glycosides

(Cardenolide)

Legal's test deep red color

faded to brown

+Ve

Chlorophyll Visual test No green colour -Ve

Essential oil Visual test On filter paper +Ve

Fatty Acids Sudan red 1 Red +Ve

The chloroformic extract was subjected to qualitative chemical tests and the results are

presented in table (3.3).

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Table 3.3 The phytochemical screening of the chloroformic extract:

Constituents Test/Reagent Observations Result Hydrolysable tannins

1- Ferric

chloride

Greenish brown

colour

-Ve

2- 2%solution of

phenazone

Turbidity -ve

Condensed tannins

1- Ferric

chloride

Greenish brown

colour

-Ve

2- Vanillin in

hydrochloric

acid

A crimson red

colour

-Ve

3- A match stick Red colour -Ve

Alkaloids

Mayers reagent White precipitate +Ve

Dragendorffs

reagent

Orange

precipitate

+Ve

iodoplatinate

modified reagent

Violet colour +Ve

Quarternary bases &

oxidized amines

Mayers reagent Yellow preciptate +Ve

Saponins

Froth test Standing foaming +Ve

Haemolysis test Haemolysis

occurred

+Ve

Carbohydrates Molishs test Violet zone -Ve

Reducing sugar Fehlig solution

(|I+II)

No Red

precipitates

-Ve

unsaturated sterols Libermann

Burchards reaction

Reddish violet

colour at the

junction of the

two layers

+Ve

Salkowiskis test Red colour +Ve

Anthracenosides Borntragers reaction No colour change -Ve

Coumarins Ammonia +UV

light

Flouresence or

Ayellow – green

colour

+Ve

Flavonoid Shinoda test Red colour +Ve

Free flavonoids

(flavonoid aglycones)

Amyl alcohol test Yellow colour +Ve

Combined flavonoids Amyl alcohol test Brownish yellow +Ve

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(flavonoid glycosides) colour

Terpenoids Salkowiskis test Red colour +Ve

Cardiac Glycosides

(Cardenolide)

Keddees test Violet color

precipitate

+Ve

Cardiac Glycosides

(Cardenolide)

Legal's test Deep red color

faded to brown

+Ve

3.2 Screening for antioxidant activity:

Table 3.4 Screening of methanolic extract for antioxidant:

Plant extract %RSA±STD

(DPPH)

Iron ch %±STD

(Iron chelating)

Nigella sativa 07±0.03 16±0.01

3.3 Screening for antimicrobial activity:

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Different concentrations of chloroformic and methanolic oils were screened for their

antimicrobial activity against Actinomycetoma( Nocardia brasiliensis, N.asteroides and

Streptomyces samaliensis ) and Eumycetoma ( Pseudallescheria boydii and 4 samples of

Madurella mycetomatis) using SDA and blood agar as culture media.

The tubes and plates were examined for inhibition of the growth of the above species

from three subcultures for each organism and the results obtained are shown on the

following tables and figures.

3.3.1Subculture from Saudi Arabia examined after 7 days of incubation:

Fig 3.1 Madurella mycetoma(SA) subculture after 7 days

Fig 3.2 Madurella mycetoma(SU2) subculture after 7 days

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Fig 3.3 Madurella mycetoma(Pot) subculture after 7 days

Fig 3.4 Nocardia asteroides Figures 3.5 Nocardia brasiliensis

subculture after 7 days subculture after 7 days

(SA) Saudi Arabia sample in Sabroud dexterose agar.

(Pot) Saudi Arabia sample in Potato desterose agar.

(SU1) and (SU2) Sample from Sudan in SDA.

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Fig 3.6 Comparison of change in media colour between

Culture tubes & blank tube media:

3.3.2Subculture from Saudi Arabia examined after 14 days of incubation:

Normal colour

Colour

change to

darker

from

growth

blank tube media

3Type of Cultures tubes

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Fig 3.7 Madurella mycetoma(SA) subculture after 14 days

Fig 3.8 Madurella mycetoma(SU2) subculture after 14 days

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Fig 3.9 Madurella mycetoma(Pot) subculture after 14 days

Fig 3.10 Nocardia asteroides Fig 3.11 Nocardia brasiliensis

subculture after 14 days subculture after 14 days

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3.3.3Subculture from Saudi Arabia examined after 23 days of incubation:

Fig 3.12 Madurella mycetoma(SA) subculture after 23 days

Fig 3.13 Madurella mycetoma(SU1) subculture after 23 days

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Fig 3.14 Madurella mycetoma(Pot) subculture after 23 days

Fig 3.15 Nocardia asteroides Fig 3.16 Nocardia brasiliensis

subculture after 23 days subculture after 23 days

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The chloroform and methanol extracts were tested separately against ((Pseudallescheria

boydii and 4 samples of Madurella mycetomatis)) and the results are shown on (Tables

3.5-3.6) and (Figures 3.17 – 3.26).

Table 3.5 Antifungal activity against (Pseudallescheria boydii and 4 samples of

Madurella mycetomatis) after 8 days:

Organesim Oil type Concentration of oil

0.05% 1% 2% 3% 4% 5% 6% 7% 8% 9% 10% Control

M.m(SA1) Methanol - - - - - - - - - - - +

M.m(Pot) - - - - - - - - - - - +

M.m(su2) - - - - - - - - - - - +

M.m(Su1) - - - - - - - - - - -

Psudo - - - - - - - - - - - +

M.m(SA1) Chloroform + - - - - - - - - - - +

M.m(Pot) + - - - - - - - - - - +

M.m(Su2) - - - - - - - - - - - +

M.m(Su1) - - - - - - - - - - - +

Psudo + + + + + - - - - - - +

Table 3.6 Antifungal activity against (Pseudallescheria boydii and 4 samples of

Madurella mycetomatis) after 30 days:

Organesim Oil type Concentration of oil

0.05% 1% 2% 3% 4% 5% 6% 7% 8% 9% 10% Control

M.m(SA) Methanol - - - - - - - - - - - +

M.m(Pot) - - - - - - - - - - - +

M.m(Su2) - - - - - - - - - - - +

M.m(Su1) - - - - - - - - - - - +

Psudo - - - - - - - - - - - +

M.m(SA) Chloroform + + - - - - - - - - - +

M.m(Pot) + + - - - - - - - - - +

M.m(Su2) + + - - - - - - - - - +

M.m(Su1) - - - - - - - - - - -

Psudo ++ ++ + + + + + + - - - +

Interpretation of the results:

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On the eighth day of incubation the control showed growth of the organism. While

cultures of four samples of Madurella mycetomatis and Pseudallescheria boydii treated

with methanolic extract showed total inhibition of the growth with all concentrations.

On other hand cultures of Madurella mycetomatis treated with chloroformic extracts

showed inhibition of growth with all oil concentrations (2% and above)

While in case of cultures of Pseudallescheria boydii inhibition of growth was recorded

only with concentration 8% and above.

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Fig 3.17 Culture of methanol extracts tested against Madurella mycetomatis(SA)

Fig 3.18 Culture of methanol extracts tested against Madurella mycetomatis(Pot)

Fig 3.19 Culture of methanol extracts tested against Madurella mycetomatis(Su1)

Fig 3.20 Culture of methanol extracts tested against Madurella mycetomatis(Su2)

Fig 3.21 Culture of methanol extracts tested against Pseudallescheria boydii

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Fig 3.22 Culture of chloroform extracts tested against Madurella mycetomatis(SA)

Fig 3.23 Culture of chloroform extracts tested against Madurella mycetomatis(Pot)

Fig 3.24 Culture of chloroform extracts tested against Madurella mycetomatis(Su1)

Fig 3.25 Culture of chloroform extracts tested against Madurella mycetomatis(Su2)

Fig 3.26 Culture of chloroform extracts tested against Pseudallescheria boy

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The chloroform and methanol extracts were tested separately against (Nocardia

brasiliensis, N.asteroides and Streptomyces samaliensis) and the results are shown on

(Tables 3.7 - 3.8) and (Figures 3.27 – 3.32).

Table 3.7 Antibacterial activity against (Nocardia brasiliensis, N.asteroides and

Streptomyces samaliensis) after 8 days:

Organesim Oil type Concentration of oil

0.05% 1% 2% 3% 4% 5% 6% 7% 8% 9% 10% Control

N.a Methanol + + - - - - - - - - - +

N.b + + - - - - - - - - - +

S.s - - - - - - - - - - - +

N.a Chloroform + + + + + + + + - - - +

N.b + + + + + + + + - - - +

S.s - - - - - - - - - - - +

Table 3.8 Antibacterial activity against (Nocardia brasiliensis, N.asteroides and

Streptomyces samaliensis) after 30 days:

Organesim Oil type Concentration of oil

0.05% 1% 2% 3% 4% 5% 6% 7% 8% 9% 10% Control

N.a Methanol + + + + - - - - - - - +

N.b + + + + - - - - - - - +

S.s + + + + + + + + + + + +

N.a Chloroform + + + + + + + + - - - +

N.b + + + + + + + + - - - +

S.s - - - - - - - - - - - +

Interpretation of the results:

On the eighth day of incubation the control and methanolic extract showed growth of the

organism. While cultures treated with chloroformic extracts showed total inhibition of the

growth with Streptomyces somaliensis in all concentrations but on the other hand

cultures of Nocardia brasiliensis and N.asteroides treated with methanolic and

chloroformic extract showed inhibition of growth with oil concentrations of 4% and 8%

respectively.

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Fig 3.27 Culture of methanol extracts tested against Nocardia brasiliensis.

Fig 3.28 Culture of methanol extracts tested against Nocardia asteroides .

Fig 3.29 Culture of methanol extracts tested against Streptomyces samaliensis .

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Fig 3.30 Culture of chloroform extracts tested against Nocardia brasiliensis.

Fig 3.31 Culture of chloroform extracts tested against Nocardia asteroides .

Fig 3.32 Culture of chloroform extracts tested against Streptomyces samaliensis .

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Table 3.9 Minimum inhibitory concentration of methanol oil extract

against mycetoma:

Organisms Concentration of methanol oil dilution Control

2.5% 1.25% 0.625% 0.31% 0.15% 0.078% 0.039% M.m(SA) - - - - + ++ +++ +

M.m(Pot) - ++ ++ ++ ++ ++ ++ + M.m(Su2) - + + ++ +++ +++ ++++ +

Fig 3.33 Culture of Minimum inhibitory concentration of methanol oil extract against mycetoma

3.2. Discussion:

M.m(SA)

M.m(Su2)

M.m(Pot)

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Nigella sativa seeds were subjected to extraction by maceration using methanol. A new

batch of the plant material was extracted by the same method using chloroform as a

solvent.

Qualitative phytochemical screening tests of the methanolic extract of Nigella sativa

seeds revealed the presence of steroids, tannins, alkaloids, quarternary bases & oxidized

amines, carbohydrates, reducing sugars, terpenoids, essential oils, fatty acids, flavonoids,

coumarins, cardiac glycosides, and saponins.

The extract was devoid of anthracenosides..

These results agreed with was previously reported by Lewis, 2006 and Adekunle &

Adekunle 2009 that N. sativa seeds contain alkaloids, flavonoids, tannins and terpenoids ,

while Eloff, 1998 and Hashem and El-Kiey, 1982 detected tannins only in the methanolic

extract. Our results were also in agreement with Chaouche et al 2011 who reported

flavonoids, tannins, coumarines, saponins and sterols in the methanolic extracts and

disagreed with them in that they did not detected alkaloids in the methanolic extracts.

While the qualitative phytochemical screening tests of the chloroform extract of Nigella

sativa seeds showed the presence of alkaloids, saponins, steroids, terpenoids, flavonoids,

coumarins and cardiac glycosides.

These results agreed with those previously reported by Morsi, 2000.

These differences might be due to age of the plant, climatic factors and different methods

used.

The oil of nigella sativa seeds was subjected to preliminary screening against three

isolates of mycetoma bacteria types [Actinomycetoma: Streptomyces somaliensis –

(causes the majority of the cases) Nocardia brasiliensis and N.asteroides] and five

isolates of fungi types [Eumycetoma: four samples of Madurella mycetomatis (causes

the majority of the cases) and one sample of Pseudallescheria boydii].

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The chloroform extract exhibited activity against all bacterial types with a minimum

inhibitory concentration (MIC) of 8% with Nocardia brasiliensis and N.asteroides and

MIC of 0.5% with Streptomyces somaliensis. It also showed activity against the fungi

types with a MIC of 2%. And showed MIC 8% with Pseudallescheria boydii. This

antimicrobial activity is due to the presence of steroids, terpenoids, flavonoids, coumarins

and cardiac glycosides in the chloroform extract as reported by Morsi, 2000.

The methanol extract exhibited activity against the fungal types with a minimum

inhibitory concentration of 0.15% with the four samples of Madurella mycetomatis and

MIC of 8% with Pseudallescheria boydii. It also showed activity against bacterial types

with MIC 4% with Nocardia brasiliensis and N.asteroides and no inhibition was noticed

with Streptomyces somaliensis. This antimicrobial activity against all strain, is due to the

presence of the essential oils as reported by Enomoto et al., 2001 and Karapinar & Aktug,

1987. Mason & Wasserman, 1987 attributed the activity to essential oils due to enzyme

inhibition by the oxidized compounds, possibly through nonspecific interactions with the

proteins. Also antimicrobial activity was found to be due to presence of tannins as

reported by Eloff, 1998 and Hashem and El-Kiey, 1982 who explain that tannins forms

complexes with proteins through forces such as hydrophobic effects, hydrogen bonding

and covalent bond formation, thus, tannins act as antibacterial agent by inactivating

microbial adhesins, enzymes, and cell envelope transport proteins.

Flavonoids have been found to be effective antimicrobial substances against a wide range

of microorganisms. This activity is probably due to their ability to form complexes with

soluble proteins and also with bacterial cell walls, as well as disruption of membrane

particularly with lipophilic flavonoids.

Triterpenes and many saponins were also known to have antimicrobial activity.

The antimicrobial activity of this plants has been studied previsouly by other researchers

against other types of bacteria different from what we are reporting in this study

(Escherichia coli, Bacillus subtilis, Streptococcus feacalis, Staphylococcus aureus,

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Pseudomonas aerginosa, Proteus vulgaris, Salmonella typhi, and Klebsiella.pneumonia)

and different types of fungi (Candida albicans, A.fumigatous, A.flavus and A.niger) ,

(Manohar et al., 2001, Mansour et al., 2002, Hafez, 1991, El-Fatatry, 1975, Hanafii &

Hatim, 1991, Khan, 2003)

So this is the first attempt to investigate the effect of Nigella sativa seeds oil against

mycetoma.

The results obtained in this study indicated that the antimicrobial activities were found in

two different extracts suggesting existence of different antimicrobial principles.

Phytochemical screening results explain the correlation between the biological activity

(antimicrobial) exhibited by this plant and detected constituents.

The methanolic extract was also screened for its anti-oxidant activity with Iron chelating

recorded a high activity than DPPH radical scavenging assay. These results were

similar to that reported by Nagi and Mansour, 2000. The anti-oxidants activity was

probably due to phenolic compounds, (tannins and flavonoids).

4.1. Conclusion:

-This study showed that oil of Nigella sativa has antimycetoma activity against both

fungal and bacterial types. And it has been used for a long time as food without any

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serious toxicity reported, it can be considered as a safe and affordable treatment for

mycetoma.

4.2. Recommendations:

1- Further studies in Minimum Inhibitory concentration (MIC) recommended to be done

for N.sativa as pure seed.

2- Further studies using other models to confirm the anti-mycetoma activity of the plant.

3- Toxicological studies to ensure the safety of the extract.

4- To be formulated in a suitable dosage form and to be tested in vivo.

5- Suitable dose must be adjusted to prevent from toxicity or over dose effects.

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