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Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42 y = 1.0047x -9.5772 R 2 = 0.9675 -8 -6 -4 -2 0 2 4 6 8 10 12 0 5 10 15 20 25 Log 2 [RN A copies/ng total R NA] Log 2 (N orm alised signal) y = -1.0205x + 42.617 R 2 = 0.9988 20 22 24 26 28 30 32 34 36 38 40 0 5 10 15 20 25 Log PC R Efficiency [R N A copies/ng total R NA] C t A B

Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42

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Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42. A. B. Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-81. A. B. - PowerPoint PPT Presentation

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Page 1: Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42

Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42

y = 1.0047x - 9.5772

R2 = 0.9675

-8

-6

-4

-2

0

2

4

6

8

10

12

0 5 10 15 20 25

Log2[RNA copies/ng total RNA]

Lo

g2(

No

rma

lise

d s

ign

al)

y = -1.0205x + 42.617

R2 = 0.9988

20

22

24

26

28

30

32

34

36

38

40

0 5 10 15 20 25

LogPCR Efficiency[RNA copies/ng total RNA]

Ct

A

B

Page 2: Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42

Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-81

y = 1.0389x - 10.155

R2 = 0.9671

-10

-8

-6

-4

-2

0

2

4

6

8

10

0 5 10 15 20 25

Log2[RNA copies/ng total RNA]

Lo

g2(N

orm

alis

ed s

ign

al)

y = -0.9946x + 40.515

R2 = 0.9992

18

20

22

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26

28

30

32

34

36

38

40

42

0 5 10 15 20 25

LogPCR Efficiency[RNA copies/ng total RNA]

Ct

A

B

Page 3: Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42

Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-84

y = 0.9772x - 5.8678

R2 = 0.9639

-6

-4

-2

0

2

4

6

8

10

12

14

16

0 5 10 15 20 25

Log2[RNA copies/ng total RNA]

Lo

g2(N

orm

alis

ed s

ign

al)

y = -0.9693x + 41.49

R2 = 0.9986

20

22

24

26

28

30

32

34

36

38

40

0 5 10 15 20 25

LogPCR Efficiency[RNA copies/ng total RNA]

Ct

A

B

Page 4: Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42

Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-95

y = 0.957x - 8.8564

R2 = 0.9712

-8

-6

-4

-2

0

2

4

6

8

10

12

0 5 10 15 20 25

Log2[RNA copies/ng total RNA]

Lo

g2(N

orm

alis

ed s

ign

al)

y = -1.0022x + 44.939

R2 = 0.9992

22

24

26

28

30

32

34

36

38

40

42

0 5 10 15 20 25

LogPCR Efficiency[RNA copies/ng total RNA]

Ct

A

B

Page 5: Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42

Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-99

y = 1.0095x - 6.6213

R2 = 0.9626

-8

-6

-4

-2

0

2

4

6

8

10

12

14

0 5 10 15 20 25

Log2[RNA copies/ng total RNA]

Lo

g2(N

orm

alis

ed s

ign

al)

y = -1.0052x + 41.88

R2 = 0.9984

20

22

24

26

28

30

32

34

36

38

40

0 5 10 15 20 25

LogPCR Efficiency[RNA copies/ng total RNA]

Ct

A

B

Page 6: Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42

Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-113

y = 1.0248x - 6.6933

R2 = 0.9993

-6

-4

-2

0

2

4

6

8

10

12

14

0 5 10 15 20 25

Log2[RNA copies/ng total RNA]

Lo

g2(N

orm

alis

ed s

ign

al)

y = -1.02x + 42.406

R2 = 0.9974

20

22

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26

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30

32

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40

0 5 10 15 20 25

LogPCR Efficiency[RNA copies/ng total RNA]

Ct

A

B

Page 7: Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-42

Additional File 2: Linear range of ERCC detection (A) microarray (B) RT-qPCR platforms: ERCC-171

y = 1.0696x - 10.718

R2 = 0.9993

-10

-8

-6

-4

-2

0

2

4

6

8

10

12

0 5 10 15 20 25

Log2[RNA copies/ng total RNA]

Lo

g2(N

orm

alis

ed s

ign

al)

y = -0.9714x + 44.299

R2 = 0.9981

22

24

26

28

30

32

34

36

38

40

42

44

0 5 10 15 20 25

LogPCR Efficiency[RNA copies/ng total RNA]

Ct

A

B