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www.elsevier.com/locate/neuint
Neurochemistry International 50 (2007) 1042–1051
The metabolic role of isoleucine in detoxification of ammonia
in cultured mouse neurons and astrocytes
Maja L. Johansen a,1, Lasse K. Bak a,1, Arne Schousboe a, Peter Iversen b, Michael Sørensen b,c,Susanne Keiding b,c, Hendrik Vilstrup c, Albert Gjedde b, Peter Ott c, Helle S. Waagepetersen a,*
a Department of Pharmacology and Pharmacotherapy, Faculty of Pharmaceutical Sciences, University of Copenhagen, 2 Universitetsparken,
2100 Copenhagen, Denmarkb Positron Emission Tomography Center, Aarhus University Hospital, 8000 Aarhus, Denmark
c Department of Medicine V, Aarhus University Hospital, 8000 Aarhus, Denmark
Received 2 November 2006; received in revised form 15 January 2007; accepted 18 January 2007
Available online 6 February 2007
Abstract
Cerebral hyperammonemia is a hallmark of hepatic encephalopathy, a debilitating condition arising secondary to liver disease. Pyruvate
oxidation including tricarboxylic acid (TCA) cycle metabolism has been suggested to be inhibited by hyperammonemia at the pyruvate and
a-ketoglutarate dehydrogenase steps. Catabolism of the branched-chain amino acid isoleucine provides both acetyl-CoA and succinyl-CoA, thus
by-passing both the pyruvate dehydrogenase and the a-ketoglutarate dehydrogenase steps. Potentially, this will enable the TCA cycle to work in the
face of ammonium-induced inhibition. In addition, this will provide the a-ketoglutarate carbon skeleton for glutamate and glutamine synthesis by
glutamate dehydrogenase and glutamine synthetase (astrocytes only), respectively, both reactions fixing ammonium. Cultured cerebellar neurons
(primarily glutamatergic) or astrocytes were incubated in the presence of either [U-13C]glucose (2.5 mM) and isoleucine (1 mM) or [U-13C]iso-
leucine and glucose. Cell cultures were treated with an acute ammonium chloride load of 2 (astrocytes) or 5 mM (neurons and astrocytes) and
incorporation of 13C-label into glutamate, aspartate, glutamine and alanine was determined employing mass spectrometry. Labeling from
[U-13C]glucose in glutamate and aspartate increased as a result of ammonium-treatment in both neurons and astrocytes, suggesting that the TCA
cycle was not inhibited. Labeling in alanine increased in neurons but not in astrocytes, indicating elevated glycolysis in neurons. For both neurons
and astrocytes, labeling from [U-13C]isoleucine entered glutamate and aspartate albeit to a lower extent than from [U-13C]glucose. Labeling in
glutamate and aspartate from [U-13C]isoleucine was decreased by ammonium treatment in neurons but not in astrocytes, the former probably
reflecting increased metabolism of unlabeled glucose. In astrocytes, ammonia treatment resulted in glutamine production and release to the
medium, partially supported by catabolism of [U-13C]isoleucine. In conclusion, i) neuronal and astrocytic TCA cycle metabolism was not inhibited
by ammonium and ii) isoleucine may provide the carbon skeleton for synthesis of glutamate/glutamine in the detoxification of ammonium.
# 2007 Elsevier Ltd. All rights reserved.
Keywords: TCA-cycle; Aspartate; Glutamate; Glutamine; Metabolism; Hepatic encephalopathy; Energy; Glucose
1. Introduction
Cerebral hyperammonemia is thought to play a pivotal role
in hepatic encephalopathy (HE), a debilitating neurological
Abbreviations: AAT, aspartate aminotransferase; ALAT, alanine amino-
transferase; HE, hepatic encephalopathy; GDH, glutamate dehydrogenase; a-
KGDH, a-ketoglutarate dehydrogenase; PBS, phosphate-buffered saline; PC,
pyruvate carboxylase; PDH, pyruvate dehydrogenase; TCA, tricarboxylic acid
* Corresponding author. Tel.: +45 35306470; fax: +45 35306021.
E-mail address: [email protected] (H.S. Waagepetersen).1 Contributed equally to this work.
0197-0186/$ – see front matter # 2007 Elsevier Ltd. All rights reserved.
doi:10.1016/j.neuint.2007.01.009
condition arising secondary to severe liver disease. The
majority of patients suffering from liver cirrhosis develop at
least one episode of HE during the cause of the disease, varying
from minor disturbances in personality to frank coma. The
pathogenesis of HE is largely unknown; however, cerebral
intoxication caused by ammonium derived from the intestines
(usually detoxified by the liver) is believed to play a role and
hyperammonemia is a hallmark of liver cirrhosis (e.g. review by
Albrecht and Dolinska, 2001). The glutamine synthetase (GS)
reaction, forming glutamine from glutamate by amidation, is
the quantitatively most important way for disposal of excess
ammonium in the mammalian brain (review, Hawkins et al.,
M.L. Johansen et al. / Neurochemistry International 50 (2007) 1042–1051 1043
2002). Interestingly, GS is selectively localized in astrocytes
(Norenberg and Martinez-Hernandez, 1979). In addition, the
mitochondrial glutamate dehydrogenase (GDH; both neurons
and astrocytes) reaction may also to some extent serve this
purpose, as it fixes ammonium while forming glutamate from
a-ketoglutarate by reductive amination, a mechanism shown to
operate in cultured neurons (Yudkoff et al., 1990).
Cerebral hyperammonemia has been suggested to inhibit
tricarboxylic acid (TCA) cycle metabolism at the level of both
pyruvate dehydrogenase (PDH) and a-ketoglutarate dehydro-
genase (a-KGDH) which are both rate-limiting steps in
oxidative metabolism (Lai and Cooper, 1986; Zwingmann
et al., 2003). The consequences of this might be an overall
reduction of oxidative (TCA cycle) metabolism, which in turn
may result in increased glycolysis. In a recently published
hypothesis, degradation of the carbon skeletons of the
branched-chain amino acids (BCAAs) particularly isoleucine
and valine, was suggested to be able to compensate for the
ammonium-induced inhibition of a-KGDH by introducing
anaplerosis subsequent to the a-KGDH step plus acetyl-CoA
(Fig. 1) (Ott et al., 2005). The anaplerotic function of
isoleucine/valine was suggested to provide the carbon skeletons
for glutamate and glutamine synthesis by GDH and GS,
respectively, both reactions consuming ammonium and thus
contributing to detoxification of excess ammonium. There are
important differences in the degradation of the BCAAs carbon
skeleton; leucine ultimately ends up as acetyl-CoA and may
then be oxidized in the TCA cycle, whereas valine ends up as
succinyl-CoA, and may act as an anaplerotic substrate.
Fig. 1. Schematic representation of the tricarboxylic acid (TCA) cycle plus the py
synthetase (GS) reactions. Glucose is catabolized to pyruvate in the process of glyco
condenses with oxaloacetate to form citrate. As indicated, the PDH step may be inhi
(a-KG) that can be reductively aminated to glutamate (Glu) by GDH producing NAD
by GS. As indicated, the formation of succinyl-CoA from a-KG by a-ketoglutarate d
the branched-chain amino acids is complex involving multiple steps. Leucine enter
succinyl-CoA and acetyl-CoA. See text for further details.
Isoleucine, on the other hand, is degraded into both acetyl-
CoA and succinyl-CoA. This would make isoleucine an ideal
substrate to counteract both the inhibition of a-KGDH and
PDH by ammonium.
In the present study, the role of isoleucine as a TCA cycle
substrate and metabolism of glucose during exposure to
ammonium chloride was investigated in cultured mouse
cerebellar neurons or astrocytes. The objective was: (i) to
detect any significant inhibitory effect of ammonium exposure
on TCA cycle metabolism; and (ii) to determine the ability of
isoleucine to support TCA cycle metabolism and formation of
glutamate/glutamine in the face of an ammonium challenge.
Both types of cell cultures were incubated in the presence of
different levels of ammonium chloride and either [U-13C]iso-
leucine or [U-13C]glucose. Cell extracts were analyzed by mass
spectrometry for incorporation of label into alanine, glutamate,
glutamine (in astrocytes) and aspartate. Release of glutamine
into the medium (astrocytes only) was quantified by HPLC.
2. Materials and methods
2.1. Materials
Seven-day-old NMRI mice were obtained from Taconic M&B (Ry, Den-
mark). Plastic tissue culture dishes were purchased from NUNC A/S (Roskilde,
Denmark), fetal calf serum from SeraLab Ltd. (Sussex, U.K.). Culture medium
and poly-D-lysine (MW > 300,000) were from Sigma Chemical Co. (St. Louis,
MO, U.S.A.). Penicillin was from Leo (Ballerup, Denmark). Isotopically
labeled compounds were either from Cambridge Isotopes Laboratories, Inc.
(Massachusetts, U.S.A.) or Isotec (a subsidiary of Sigma Chemical Co.), all
ruvate dehydrogenase (PDH). glutamate dehydrogenase (GDH) and glutamine
lysis and the resulting pyruvate is decarboxylated by PDH to acetyl-CoA which
bited by hyperammonemia. Citrate is in three steps converted to a-ketoglutarate
(P)+ in the process. In astrocytes, glutamate may be amidated to glutamine (Gln)
ehydrogenase (a-KGDH) may be inhibited by hyperammonemia. Catabolism of
s the TCA cycle as acetyl-CoA, valine as succinyl-CoA and isoleucine as both
Fig. 2. Simplified schemes illustrating tricarboxylic acid (TCA) cycle metabolism of [U-13C]glucose (A) or [U-13C]isoleucine (B). Labeled carbon atoms are
represented by black circles. (A) TCA cycle metabolism of [1,2-13C]acetyl-CoA or acetyl-CoA derived from [U-13C]glucose or glucose/lactate. respectively. In the
first turn, unlabeled oxaloacetate condenses with either labeled or unlabeled acetyl-CoA. The scheme shows all the possible combinations of label in glutamate and
aspartate during three turns of the TCA cycle. Insert: labeling patterns of glutamate (first turn) and direct formation of aspartate from labeled oxaloacetate arising from
pyruvate carboxylase activity on [U-13C]pyruvate. (B) TCA cycle metabolism of [U-13C]isoleucine and unlabeled acetyl-CoA, the latter derived from glucose/lactate.
[U-13C]isoleucine is metabolized to [U-13C]succinyl-CoA and [1,2-13C]acetyl-CoA (the latter assumed to be negligible compared to the contribution from unlabeled
glucose/lactate, see insert). In the first turn, unlabeled oxaloacetate condenses with either labeled or unlabeled acetyl-CoA. The scheme shows all the possible
M.L. Johansen et al. / Neurochemistry International 50 (2007) 1042–10511044
M.L. Johansen et al. / Neurochemistry International 50 (2007) 1042–1051 1045
were >98% enriched. The Phenomenex EZ:faast LC–MS kit was used for
amino acid analysis. All other chemicals used were of the purest grade available
from regular commercial sources.
2.2. Cell cultures
Cerebellar neurons were cultured from seven-day-old mice essentially as
described by Schousboe et al. (1989). After dissection of the cerebellum, the
tissue was exposed to a mild trypsinization (0.25 mg/ml trypsin, 15 min, 37 8C)
followed by trituration in a DNase solution (75 i.u./ml) containing a trypsin
inhibitor (0.53 mg/ml) from soybeans. The cells were suspended
(3.0 � 106 cells/ml) in a slightly modified Dulbecco’s medium (Hertz et al.,
1982) containing 24.5 mM KCl, 12 mM glucose, 7 mM p-aminobenzoate,
50 mM kainate and 10% fetal calf serum and cultured in poly-D-lysine coated
25 cm2 or 80 cm2 culture flasks (5 or 15 ml/flask, respectively). To prevent
astrocytic proliferation, cytosine arabinoside was added after 48 h in culture to a
concentration of 20 mM. The cells were cultured for 7–8 days, at which point
the cultures exhibit pronounced glutamatergic characteristics. This is due to the
treatment with cytosine arabinoside and kainate, which inhibit proliferation of
astrocytes and GABAergic cell function, respectively (Drejer and Schousboe,
1989; Sonnewald et al., 2004, 2006). The medium of the individual cultures was
supplemented twice with an aliquot of glucose to reach a minimum concentra-
tion of 12 mM. Cerebellar astrocytes were cultured from dissociated cerebella
from 7-day-old mice as detailed by Hertz et al. (1989) and Waagepetersen et al.
(2000). Briefly, the dissected cerebella were mechanically dissociated by
squeezing the tissue through 80 mm nylon sieves into the culture medium
and subsequently the cell suspension was seeded in 25 cm2 or 80 cm2 culture
flasks (5 or 15 ml/flask corresponding to 0.8 or 4 animals, respectively). The
cells were cultured in a slightly modified Dulbecco’s medium containing 6 mM
glucose and 2.5 mM glutamine (Hertz et al., 1982). The culture medium was
changed twice a week and maintained for three weeks before experiments were
performed. The last week of the culturing period, di-butyryl-cAMP (final
concentration 0.25 mM) was added to the culture medium, which induces
morphological and biochemical differentiation (Juurlink and Hertz, 1985; Hertz
et al., 1989).
2.3. Incubation experiments
Following the culture period, the medium was discarded and the cells were
rinsed twice in phosphate-buffered saline (PBS; 137 mM NaCl, 2.7 mM KCl,
7.3 mM Na2HPO4, 0.9 mM CaCl2, 0.5 mM MgCl2, pH 7.4, 37 8C) and sub-
sequently incubated for 5 h in serum-free culture medium (25 cm2 flasks: 5 ml;
80 cm2 flasks: 15 ml) containing ammonium chloride (0, 2 or 5 mM), 1 mM
lactate, 2.5 mM glucose and 1 mM [U-13C]isoleucine or 1 mM lactate, 2.5 mM
[U-13C]glucose and 1 mM isoleucine. In addition, the serum-free medium
contained 0.8 mM of unlabeled isoleucine. The incubation medium was
supplemented with ammonium chloride after 2.5 h to a minimum concentration
of the level for that experiment, i.e. 2 (astrocytes) or 5 mM (neurons and
astrocytes). For all experiments, a 30 min pre-incubation period was employed
by adding ammonium chloride to the culture medium. The incubation was
terminated by separating the medium from the cells which were rinsed twice in
PBS and extracted with 70% (v/v) ethanol. The cells were scraped off the flask
and the cell-ethanol mixture was centrifuged at 20,000 g (20 min) to separate
the soluble extract from the insoluble component. In parallel, the resulting
supernatant and the incubation medium (astrocytes only) were subsequently
lyophilized and reconstituted in water for biochemical analyses.
2.4. Biochemical analyses
Amino acids were separated and quantified by reversed-phase HPLC
employing pre-column, on-line o-phthaldialdehyde derivatization and fluores-
cence detection (excitation 350 nm; detection 450 nm) (Geddes and Wood,
1984). Mass spectrometric analysis was performed on an LC–MS system
combinations of label in glutamate and aspartate during two turns of the TCA cycle a
AT, aminotransferase; a-KG, a-ketoglutarate; GDH, glutamate dehydrogenase; LDH
pyruvate dehydrogenase.
consisting of a Shimadzu LCMS-2010 mass spectrometer coupled to a Shi-
madzu 10A VP HPLC system. The Phenomenex EZ:faast amino acid analysis
kit for LC–MS was used for analysis of labeling in relevant amino acids. Protein
content was determined according to Lowry et al. (1951) using bovine serum
albumin as the standard.
2.5. Calculation of percent molecular carbon labeling (MCL)
To obtain a measure of total incorporation of 13C label into intracellular
glutamate, the average percent of labeled carbon atoms was calculated, as
initially introduced by Bak et al. (2006). Glutamate may contain anywhere
between one and five 13C atoms. To provide a measure of the total labeling of
the glutamate pool, the percent of the individual isotopomers are first multiplied
by the number of carbons labeled. Subsequently these numbers are summed up
and expressed as a percent of the total number of carbon atoms. Hence, percent
MCL is a measure of the total labeling of glutamate.
2.6. Data analysis
All labeling data were corrected for natural abundance of 13C by subtracting
a sample of the relevant metabolite. Isotopic enrichment was calculated
according to Biemann (1962). Data analysis was performed using Microsoft
Excel 2003 and GraphPad Prism v4.01. All data are presented as averages � the
standard error of the mean (S.E.M.). Differences between groups were analyzed
using one-way ANOVA followed by Bonferroni post hoc test. A P-value <0.05
was considered statistically significant.
3. Results
In the present study, 13C-labeling from either [U-13C]iso-
leucine or [U-13C]glucose observed in alanine, glutamate,
glutamine (astrocytes only) and aspartate is employed to study
the effect of ammonium on TCA cycle metabolism of these two
substrates. TCA cycling may in any given microenvironment be
monitored using labeling of glutamate since aspartate
aminotransferase (AAT) activity is several-fold higher than
that of the TCA cycle (Drejer et al., 1985; Fitzpatrick et al.,
1990; Mason et al., 1992). When [U-13C]glucose is the
substrate, the incorporation of label in glutamate is a product of
the extent of label in the pyruvate/acetyl-CoA pool as well as
TCA cycling; see Bak et al. (2006) for a more extensive
discussion on this matter.
3.1. Incorporation of 13C-label into relevant amino acids
from [U-13C]glucose or [U-13C]isoleucine
Label from [U-13C]glucose (Fig. 2A) enters the TCA cycle
as [1,2-13C]acetyl-CoA formed from [U-13C]pyruvate gener-
ated in glycolysis. In addition, [U-13C]pyruvate can be
transaminated by alanine aminotransferase (ALAT) to
[U-13C]alanine or carboxylated in astrocytes by pyruvate
carboxylase (PC) to [1,2,3-13C]oxaloacetate, which will
equilibrate with the preceding reversible reactions of the
TCA cycle to form [2,3,4-13C]oxaloacetate as well (Fig. 2A,
insert). Glutamate and subsequently glutamine in astrocytes are
labeled from the TCA cycle intermediate a-ketoglutarate.
Likewise, aspartate is labeled from the TCA cycle intermediate
s indicated. AAT, aspartate aminotransferase; ALAT, alanine aminotransferase;
, lactate dehydrogenase; OAA, oxaloacetate; PC, pyruvate carboxylase; PDH,
Fig. 3. Cultured cerebellar neurons were incubated in serum-free culture
medium in the presence of [U-13C]glucose (2.5 mM) and isoleucine (1 mM)
for 5 h. The effect of 5 mM ammonium chloride was investigated (black bars;
see Section 2 for details). Cell extracts were analyzed by mass spectrometry for
percent 13C-labeling of glutamate (A), alanine (B) and aspartate (C). The results
are averages of 4–5 cultures � S.E.M. (*): significantly different from the
control condition (P < 0.05). n.q: not quantifiable.
M.L. Johansen et al. / Neurochemistry International 50 (2007) 1042–10511046
oxaloacetate. Fig. 2A shows all possible isotopomers of
glutamate and aspartate after three turns of the TCA cycle when
[1,2-13C]acetyl-CoA or unlabeled acetyl-CoA is metabolized,
as well as the isotopomers formed via PC activity in the first
turn.
Label from [U-13C]isoleucine (Fig. 2B) enters the TCA
cycle at the level of succinyl-CoA following several steps
(Yudkoff, 2006). The resulting succinyl-CoA and subsequently
oxaloacetate is triple labeled and the latter may be transami-
nated to triple labeled aspartate. In the first turn of the TCA
cycle, glutamate and glutamine (in astrocytes) will be double
and triple labeled, whereas aspartate will be double labeled.
Provided that an unlabeled acetyl-CoA condenses with labeled,
i.e. first-turn derived oxaloacetate, a second turn of the TCA
cycle results in mono and double labeling of glutamate/
glutamine.
3.2. Effects of ammonium on metabolism of
[U-13C]glucose or [U-13C]isoleucine in neurons
To study the effect of ammonium chloride (5 mM) on
neuronal TCA cycle metabolism of glucose or isoleucine,
cultured cerebellar neurons were incubated in the presence of
either [U-13C]isoleucine (1 mM) and glucose (2.5 mM) or
[U-13C]glucose and isoleucine. [U-13C]glucose was included to
study the effect of ammonium on glycolysis and TCA cycling
per se.
Labeling from [U-13C]glucose in glutamate was extensive,
showing a decrease in mono and double labeling whereas
quadruple and uniform label were increased when incubated in
the presence of ammonium chloride (5 mM; Fig. 3A). This
indicates that TCA cycle metabolism of [1,2-13C]acetyl CoA
was elevated, as quadruple and uniformly labeled glutamate
are formed in the second or third turn of the TCA cycle,
respectively. Uniform labeling of alanine was increased as an
effect of ammonium treatment (Fig. 3B), reflecting increased
formation of [U-13C]pyruvate which is transaminated into
[U-13C]alanine (see Fig. 2). Label in aspartate showed the same
pattern as that of glutamate, i.e. decreases in mono and double
plus increases in triple and uniform labeling, again indicating
that TCA cycling of 13C-label from glucose was increased
(Fig. 3C). The amounts (nmol/mg protein) of individual
isotopomers of glutamate (Table 1) showed a similar pattern of
significant differences with regard to the effect of ammonium as
the percent labeling except for double and triple labeling which
was unchanged and increased, respectively.
Labeling of glutamate and aspartate from [U-13C]isoleucine
was lower than that from [U-13C]glucose (Fig. 4); however, it
should be noted that the enrichment of [U-13C]isoleucine was
only 56% in the medium. Mono, double and triple labeling in
glutamate decreased significantly in the presence of ammonium
chloride (Fig. 4A). In line with this, mono and double labeled
aspartate decreased as well, probably as a consequence of
increased TCA cycle metabolism of unlabeled glucose or lactate.
However, triple labeled aspartate did not change, indicating that
the flow of label from [U-13C]isoleucine into succinyl-CoA was
not inhibited (Fig. 4B). In addition, the amount of triple labeled
aspartate actually increased significantly from 0.20 � 0.01 to
0.27 � 0.02 nmol/mg protein (P < 0.05), showing increased
synthesis of aspartate from [1,2,3-13C]/[2,3,4-13C]oxaloacetate
originating from [U-13C]isoleucine. Significant decreases were
observed in the amounts of mono and double labeling of
glutamate (Table 1).
The total amounts of glutamate, aspartate and alanine
increased after incubation in the presence of ammonium
chloride (Table 2), indicating that ammonium is fixed by the
neuronal GDH reaction forming glutamate that is used for
transamination to form alanine and aspartate.
3.3. Effects of ammonium on metabolism of
[U-13C]glucose or [U-13C]isoleucine in astrocytes
Cultures of astrocytes were incubated in the presence of
either [U-13C]isoleucine (1 mM) and glucose (2.5 mM) or
[U-13C]glucose and isoleucine with or without exposure to
ammonium chloride (2 or 5 mM).
Labeling from [U-13C]glucose in glutamate was extensive,
with double labeled glutamate being the most abundant
isotopomer (Fig. 5A). Mono labeling in glutamate decreased
Table 1
Amount of 13C-labeled glutamate isotopomers (nmol/mg protein) in cultured cerebellar neurons or astrocytes incubated for 5 h in the presence of either 2.5 mM
[U-13C]glucose and 1 mM isoleucine or [U-13C]isoleucine and glucose
Amount of 13C-labeled glutamate (nmol/mg of protein)
Precursor [U-13C]glucose
Cell type Condition Mono Double Triple Quadruple Uniform
Neurons Control 5.0 � 0.2 12.5 � 0.4 8.3 � 0.2 5.8 � 0.3 3.3 � 0.2
5 mM NH4+ 2.2 � 0.2 12.0 � 0.8 14.1 � 0.9* 18.4 � 1.2* 22.8 � 2.0*
Astrocytes Control 2.4 � 0.1 7.3 � 0.3 2.8 � 0.1 1.6 � 0.1 0.7 � 0.04
2 mM NH4+ 2.1 � 0.1 9.7 � 0.2* 3.9 � 0.1* 4.2 � 0.1* 1.7 � 0.05*
5 mM NH4+ 1.9 � 0.1 10.0 � 0.6* 4.2 � 0.2* 5.0 � 0.3* 2.1 � 0.1*
Precursor [U-13C]isoleucine
Cell type Condition Mono Double Triple Quadruple Uniform
Neurons Control 2.8 � 0.2 2.4 � 0.2 0.4 � 0.03 – –
5 mM NH4+ 1.3 � 0.1* 1.3 � 0.1* 0.1 � 0.01 – –
Astrocytes Control 1.4 � 0.1 3.1 � 0.3 0.5 � 0.04 – –
2 mM NH4+ 1.9 � 0.1 4.2 � 0.3* 0.6 � 0.1 – –
5 mM NH4+ 1.6 � 0.1 3.2 � 0.2� 0.6 � 0.03 – –
Cultured cerebellar neurons or astrocytes were incubated for 5 h in serum-free culture medium containing either 2.5 mM [U-13C]glucose and 1 mM isoleucine or
[U-13C]isoleucine and glucose, as detailed in Section 2. Cell extracts were analyzed by HPLC and LC–MS for amount of intracellular glutamate and 13C-labeling,
respectively (see Section 2). Results are amounts of 13C-labeled intracellular glutamate isotopomers (nmol/mg protein) expressed as the average � S.E.M. of 3–9
individual values. (*): significantly different from the control condition (P < 0.05); (�): significantly different from the values obtained in the presence of 2 mM
ammonium (P < 0.05).
M.L. Johansen et al. / Neurochemistry International 50 (2007) 1042–1051 1047
whereas quadruple and uniform labeling increased with
increasing ammonium concentrations (2 and 5 mM;
Fig. 5A), suggesting increased TCA cycling. In addition,
double and triple labeling in glutamate increased as a
consequence of ammonium treatment; however, no differences
were observed between 2 and 5 mM ammonium. Increased
double and triple labeling along with quadruple and uniform
labeling may indicate increased PC activity as a consequence of
Fig. 4. Cultured cerebellar neurons were incubated in serum-free culture
medium in the presence of [U-13C]isoleucine (1 mM) and glucose (2.5 mM)
for 5 h. The effect of 5 mM ammonium chloride was investigated (black bars;
see Section 2 for details). Cell extracts were analyzed by mass spectrometry for
percent 13C-labeling of glutamate (A) and aspartate (B). The results are
averages of 4–5 cultures � S.E.M. (*): significantly different from the control
condition (P < 0.05).
treatment with ammonium (see Fig. 2 and Section 4.2). In
contrast to what was observed in neurons, uniform labeling in
alanine did not increase upon ammonium treatment indicating
that glycolysis was not up-regulated in these cells (Fig. 5B).
Aspartate mimicked glutamate showing ammonium-dependent
increases in double and uniform labeling, although only
modestly in double labeling (Fig. 5C). Glutamine, which is
formed from glutamate, showed ammonium-dependent
increases in label for quadruple and uniformly labeled
isotopomers (Fig. 5D). Amounts of double, triple, quadruple
and uniformly labeled glutamate were increased in the presence
of ammonium (Table 1).
Table 2
Amount of amino acids in cultured cerebellar neurons incubated for 5 h in the
presence of either 2.5 mM [U-13C]glucose and 1 mM isoleucine or [U-13C]iso-
leucine and glucose
Metabolite Content (nmol/mg protein)
Control 5 mM NH4+
Glutamate 42.5 � 1.8 68.7 � 2.8*
Aspartate 10.7 � 0.5 15.4 � 0.7*
Alanine 17.2 � 0.8 20.9 � 1.0*
Leucine 7.0 � 0.7 7.8 � 0.2
Isoleucine 24.3 � 2.7 27.1 � 1.0
Valine 8.8 � 1.0 10.1 � 0.6
Cultured cerebellar neurons were incubated for 5 h in serum-free culture
medium containing either 2.5 mM [U-13C]glucose and 1 mM isoleucine or
[U-13C]isoleucine and glucose, as detailed in Section 2. Cell extracts were
analyzed by HPLC for amount of intracellular amino acids (See Section 2). As
the experimental conditions were the same regardless of whether glucose or
isoleucine was labeled, results are shown as the average � S.E.M. of all (9–14)
cultures contained in both groups. (*): significantly different from the control
condition (P < 0.05).
Fig. 5. Cultured cerebellar astrocytes were incubated in serum-free culture
medium in the presence of [U-13C]glucose (2.5 mM) and isoleucine (1 mM) for
5 h. The effect of 2 (white bars) or 5 mM ammonium chloride was investigated
(black bars; see Section 2 for details). Cell extracts were analyzed by mass
spectrometry for percent 13C-labeling of glutamate (A), alanine (B), aspartate
(C) and glutamine (D). The results are averages of 4–5 cultures � S.E.M. (*):
significantly different from the control condition (P < 0.05); (�): significantly
different from cultures incubated in the presence of 2 mM ammonium
(P < 0.05).
Fig. 6. Cultured cerebellar astrocytes were incubated in serum-free culture
medium in the presence of [U-13C]isoleucine (1 mM) and glucose (2.5 mM) for
5 h. The effect of 2 (white bars) or 5 mM ammonium chloride was investigated
(black bars; see Section 2 for details). Cell extracts were analyzed by mass
spectrometry for percent 13C-labeling of glutamate (A), aspartate (B) and
glutamine (C). The results are averages of 4–5 cultures � S.E.M. (*): signifi-
cantly different from the control condition (P < 0.05); (�): significantly
different from cultures incubated in the presence of 2 mM ammonium
(P < 0.05).
M.L. Johansen et al. / Neurochemistry International 50 (2007) 1042–10511048
Label from [U-13C]isoleucine in glutamate was most
pronounced for double labeling, with mono and triple labeled
glutamate being about one half and one fourth of that observed
for double labeling, respectively (Fig. 6A). Double labeling in
aspartate was most significant, compared to mono and triple
labeling (Fig. 6B). The double and triple labeled isotopomers of
aspartate decreased slightly upon ammonium treatment
(5 mM). Interestingly, both mono and double labeling in
glutamine increased as an effect of ammonium treatment
(Fig. 6C), which was in contrast to glutamate. This indicates
that glutamine is synthesized from a glutamate pool different
from the average glutamate pool, and that glutamine may be
produced from the isoleucine carbon skeleton in the presence of
ammonium. Compared to percent labeling, the amount of
double labeled glutamate actually increased in the presence of
2 mM ammonium compared to both the control and the
presence of 5 mM ammonium (Table 1).
The amount of glutamate, glutamine and alanine increased
as an effect of ammonium treatment at both 2 and 5 mM of
ammonium (Table 3), whereas aspartate increased at 2 mM
ammonium but decreased at 5 mM ammonium as compared to
the control value. The amount of extracellular glutamine was
doubled, from 107.7 � 5.3 to 226.0 � 17.8 nmol/mg protein
(P < 0.05), as a consequence of incubation in the presence of
2 mM ammonium.
3.4. Comparison of [U-13C]isoleucine or [U-13C]glucose
metabolism in neurons and astrocytes
To obtain a comparable measure of the extent of
[U-13C]isoleucine or [U-13C]glucose metabolism in neurons
Table 3
Amount of amino acids in cultured cerebellar astrocytes incubated for 5 h in the
presence of either 2.5 mM [U-13C]glucose and 1 mM isoleucine or [U-13C]iso-
leucine and glucose
Metabolite Content (nmol/mg protein)
Control 2 mM NH4+ 5 mM NH4
+
Glutamate 24.8 � 0.4 38.6 � 2.0* 32.3 � 1.2*
Glutamine 3.1 � 0.3 7.3 � 0.5* 8.0 � 0.8*
Aspartate 15.1 � 0.7 23.4 � 1.0* 6.3 � 0.2*,�
Alanine 4.5 � 0.2 5.6 � 0.3* n.d.
Leucine 3.6 � 0.2 4.4 � 0.5 n.d.
Isoleucine 11.8 � 0.6 14.2 � 1.7 n.d.
Valine 4.3 � 0.2 5.1 � 0.5 n.d.
Cultured cerebellar astrocytes were incubated for 5 h in serum-free culture
medium containing either 2.5 mM [U-13C]glucose and 1 mM isoleucine or
[U-13C]isoleucine and glucose, as detailed in Section 2. Cell extracts were
analyzed by HPLC for amount of intracellular amino acids (See Section 2). As
the experimental conditions were the same regardless of whether glucose or
isoleucine was labeled, results are shown as the average � S.E.M. of all (4–10)
cultures contained in both groups. (*), significantly different from the control
condition (P < 0.05); (�): significantly different from cultures incubated in the
presence of 2 mM ammonium (P < 0.05). n.d., not determined.
M.L. Johansen et al. / Neurochemistry International 50 (2007) 1042–1051 1049
and astrocytes, MCL values (see Section 2.5) were calculated
and presented in Fig. 7. [U-13C]glucose (Fig. 7A) was
metabolized to a much higher extent than [U-13C]isoleucine
(Fig. 7B). Furthermore, metabolism of [U-13C]isoleucine
tended to decrease in the presence of ammonium whereas
Fig. 7. Cultured cerebellar neurons or astrocytes were incubated in serum-free
culture medium in the presence of either [U-13C]isoleucine (1 mM) and glucose
(2.5 mM) (A) or [U-13C]glucose and isoleucine (B) for 5 h. For neurons, the
effect of 5 (white bars), and for astrocytes 2 and 5 mM ammonium was
investigated (white and black bars, respectively). Results are averages of
percent molecular carbon labeling (MCL) � S.E.M. for intracellular glutamate
(see Section 2 for details). (*): significantly different from the control condition
(P < 0.05); (�): significantly different from cultures incubated in the presence
of 2 mM ammonium (P < 0.05).
that of [U-13C]glucose increased in both neurons and
astrocytes, although the changes were most pronounced in
the neurons.
4. Discussion
Cerebral metabolic disturbances caused by hyperammone-
mia which may be related to the development of HE have so far
not been fully elucidated. It was shown more than 4 decades
ago, that ammonium inhibits oxygen consumption in brain
slices and isolated mitochondria (McKhann and Tower, 1961)
and, in addition, it has been suggested that the malate-aspartate
shuttle may be inhibited due to a lowered amount of cytosolic
glutamate (e.g. Hindfelt et al., 1977). Two hypotheses evolving
around ammonium-induced inhibition of enzymes have been
put forward, namely inhibition of a-KGDH (Lai and Cooper,
1986) or PDH (Zwingmann et al., 2003), resulting in inhibition
of TCA cycle flux or lactate production, respectively. It was
recently suggested by Zwingmann et al. (2003) that lactate,
rather than glutamine accumulation was the cause of the brain
edema observed in acute liver failure induced by initial
portacaval anastomosis followed by ligation of the hepatic
artery in rats. Accumulation of glutamine as the cause of brain
edema has been a longstanding dogma (Albrecht and Dolinska,
2001). However, inhibition of energy metabolism, i.e.
inhibition of the TCA cycle or the PDH reaction, may explain
some of the cerebral impairments observed during hyper-
ammonemia. Catabolism of isoleucine results in formation of
both succinyl-CoA (a TCA cycle intermediate) and acetyl-
CoA, thus supplying both an anaplerotic substrate down-stream
of the a-KGDH step as well as acetyl-CoA for synthesis of
citrate from oxaloacetate by citrate synthase (see Fig. 1). As
recently pointed out by Ott et al. (2005), this may serve a dual
purpose: (i) it bypasses the potential ammonium-dependent
inhibition of both a-KGDH and PDH; and (ii) it provides the
carbon skeleton for detoxification of ammonium via synthesis
of glutamate and glutamine.
4.1. Effects of ammonium on neuronal metabolism of
glucose or isoleucine
The present results suggest that neuronal glycolysis was
increased as a consequence of ammonium treatment due to an
increase in labeling of alanine. This may be consistent with a
direct effect of ammonium on glycolytic enzymes (Clarke and
Sokoloff, 1999). In contrast, a recent study in cultured cells
found no increase in glycolysis in cultured (GABAergic)
interneurons (Kala and Hertz, 2005); however, this may be due
to differences between cultured cerebellar (glutamatergic)
neurons and cortical GABAergic interneurons. One significant
difference between these two cell types is the activity of GDH,
the activity being highest in cerebellar neurons (Zaganas et al.,
2001). As the mitochondrial GDH reaction produces NAD(P)+
when operating in the direction of reductive amination
producing glutamate from a-ketoglutarate, this may increase
TCA cycle metabolism by supplying NAD+ substrates for the
TCA cycle dehydrogenases. In turn, this consumes pyruvate/
M.L. Johansen et al. / Neurochemistry International 50 (2007) 1042–10511050
acetyl-CoA generated from glucose contributing to the
observed increase in glycolysis. Alternatively, the increase
in labeled alanine may be interpreted as inhibition of PDH;
however, this is unlikely as inhibition of neither the PDH
reaction nor the TCA cycle at the a-KGDH step was apparent.
This is evidenced by the fact that both glutamate and aspartate,
respectively, exhibited ammonium-dependent increases in
labeling patterns from [U-13C]glucose associated with
subsequent turns of the TCA cycle. In support of this, a
previous study performed in cultured neurons found no
inhibition by acute ammonium (3 mM) treatment of 14CO2
production from [U-14C]glucose (Hertz et al., 1987). In
addition, the amount of glutamate was increased following
ammonium treatment, consistent with glutamate synthesis via
the GDH reaction, as was observed in a previous study by
Yudkoff et al. (1990). Hypothetically, the synthesis of
glutamate may to some extent be supported by the anaplerotic
action of isoleucine metabolism. Mono and double labeling
from [U-13C]isoleucine of both glutamate and aspartate
decreased as an effect of ammonium treatment. This is
probably an effect of simultaneous increased metabolism of
the unlabeled glucose or lactate present in the incubation
medium. Furthermore, percent triple labeling in aspartate,
most likely formed from [U-13C]isoleucine-derived triple
labeled oxaloacetate, did not decrease in the face of the
ammonium-challenge. However, the amount (in contrast to
percent) of triple labeled aspartate in fact increased, indicating
that catabolism of isoleucine supports formation of TCA cycle
intermediates during exposure to ammonium.
The incorporation of 13C from [U-13C]isoleucine and
[U-13C]glucose into glutamate may be compared using the
MCL values. The MCL of glutamate when [U-13C]glucose was
the precursor was 10 times higher than when [U-13C]isoleucine
was the precursor. Ammonium had an opposite effect on the
MCL of glutamate produced from the two labeled precursors,
i.e. decreasing and increasing for [U-13C]isoleucine and
[U-13C]glucose, respectively. The comparison is complicated
by the fact that the increase of glucose metabolism in the
presence of ammonium decreases the labeling from [U-13C]iso-
leucine which might be evident from the size of the relative
effect of ammonium on the incorporation from the two
precursors.
4.2. Effects of ammonium on astrocytic metabolism of
glucose or isoleucine
Interestingly, alanine labeling from [U-13C]glucose was
unaffected by ammonium treatment, showing that glycolysis
was not up-regulated in astrocytes in the face of an
ammonium challenge. This was in contrast to the observation
in neurons. Moreover, anaplerosis by formation of oxaloa-
cetate by the astrocytic PC reaction may be increased, as (i)
the intracellular amount of amino acids as well as the amount
of glutamine in the incubation medium increased, and (ii) the
relative amount of double, triple, quadruple and uniformly
labeled glutamate increased. Under the same conditions in
neurons in which pyruvate carboxylation is absent no
increase was observed in double and triple labeling of
glutamate. These observations might reflect that glutamate
generated in astrocytes down-stream of [1,2,3-13C]/
[2,3,4-13C]oxaloacetate is de novo synthesized from uni-
formly labeled pyruvate. Labeling in aspartate from
[U-13C]glucose increased as an effect of ammonium
treatment, albeit at a lower extent compared to glutamate.
This may indicate that the astrocytic TCA cycle is slightly
inhibited at the a-KGDH step by exposure to ammonium, as
labeling of aspartate takes place after this step. Isoleucine
was metabolized to a lower extent than glucose, with only
minor decreasing effects of ammonium treatment in
glutamate and aspartate labeling suggesting that isoleucine
is employed as an anaplerotic substrate during both control
conditions and hyperammonemia, cf. the reasoning in Section
4.1 that [U-13C]isoleucine sustains the ability to label
glutamate/aspartate in the face of increased metabolism of
unlabeled acetyl-CoA.
The labeling pattern of glutamine was similar to that of
glutamate from [U-13C]glucose and the effects of ammonium
were similar although more pronounced with regard to
glutamate. This indicates that the pools of glutamate and
glutamine labeled from glucose are not compartmentalized. In
contrast, the effect of ammonium on labeling of glutamine, i.e.
increased mono and double labeling, was different from that of
glutamate when isoleucine was the labeled precursor indicat-
ing compartmentation of glutamate and glutamine. In addition,
it might be tempting to suggest that isoleucine to some extent
particularly supports synthesis of glutamine during elevated
ammonium. Compartmentation of cellular glutamate is not
surprising, given the fact that astrocytes show a significant
degree of metabolic compartmentation (e.g. Schousboe et al.,
1993; Waagepetersen et al., 2001, 2006; Sickmann et al.,
2005).
4.3. Summary
The focus of this work was: (i) to detect any significant
inhibitory effect of hyperammonemia on TCA cycle metabo-
lism; and (ii) to determine the ability of isoleucine to support
TCA cycle metabolism and formation of glutamate/glutamine
in the face of an ammonium challenge. To conclude: (i) only
slight indications for inhibition of astrocytic TCA cycle
metabolism was obtained in the experimental paradigm
employed, whereas neuronal TCA cycling was increased;
and (ii) isoleucine was metabolized in both neurons and
astrocytes serving a role as anaplerotic substrate. Hence, the
carbon skeleton of isoleucine was employed for glutamate and
aspartate synthesis in neurons and glutamate, aspartate and
glutamine synthesis in astrocytes, thus aiding in detoxification
of the ammonium.
Based on these findings, the role of branched-chain amino
acids in the treatment and pathology of cerebral hyperammo-
nemia/HE seems to be worth further investigations. One
pertinent future goal is to substantiate the present findings in an
in vivo model of chronic or acute cerebral hyperammonemia,
and such studies are presently underway.
M.L. Johansen et al. / Neurochemistry International 50 (2007) 1042–1051 1051
Acknowledgements
Mr. Lars Evje, M.Sc. (Norwegian University of Science and
Technology) and Ms. Lene Vigh (Danish University of
Pharmaceutical Sciences) are cordially acknowledged for their
expert technical assistance. The Lundbeck, Alfred Benzons and
Hørslev Foundations as well as the Danish Medical Research
Council (grants 22-04-0314 and 22-03-0250) are cordially
acknowledged for generous funding.
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