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EBI is an Outstation of the European Molecular Biology Laboratory.
Kinetic Simulation Algorithm Ontology
Dagmar Waltemath, Anna Zhukova, Nick Juty, Camille Laibe and Nicolas Le Novère
COMBINE 2011 Heidelberg, 3rd - 7th September
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COMBINE 2011, Heidelberg, September 3–72
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COMBINE 2011, Heidelberg, September 3–73
KiSAO 2.0 vs 1.0N
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–74
KiSAO 2.0 vs 1.0N
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–75
KiSAO 2.0 vs 1.0N
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–76
KiSAO 2.0 vs 1.0N
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–77
KiSAO 2.0 vs 1.0N
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–78
KiSAO 2.0 vs 1.0N
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–79
KiSAO 2.0 vs 1.0N
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–710
KiSAO 2.0 vs 1.0N
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–711
Nat
ure
Pre
cedi
ngs
: doi
:10.
1038
/npr
e.20
11.6
330.
1 : P
oste
d 3
Sep
201
1
COMBINE 2011, Heidelberg, September 3–712
Nat
ure
Pre
cedi
ngs
: doi
:10.
1038
/npr
e.20
11.6
330.
1 : P
oste
d 3
Sep
201
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COMBINE 2011, Heidelberg, September 3–713
Use Case: libKiSAO and Simulation ToolsN
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–714
Use Case: libKiSAO and Simulation ToolsN
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–715
Use Case 2: libKiSAO and Simulation ToolsN
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–716
Use Case: libKiSAO and Simulation ToolsN
atur
e P
rece
ding
s : d
oi:1
0.10
38/n
pre.
2011
.633
0.1
: Pos
ted
3 S
ep 2
011
COMBINE 2011, Heidelberg, September 3–717
Acknowledgments
KiSAO
Dagmar Waltemath, Anna Zhukova, Nick Juty, Camille Laibe, Nicolas Le Novère
libKiSAOAnna Zhukova, Richard Adams, Camille Laibe, Nicolas Le Novère
We would like to thank European Molecular Biology Laboratory and Marie-Curie BioStar for providing resources to carry out this work.
The community of SED-ML for their contributions and their comments.
Nat
ure
Pre
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ngs
: doi
:10.
1038
/npr
e.20
11.6
330.
1 : P
oste
d 3
Sep
201
1
COMBINE 2011, Heidelberg, September 3–718
http://biomodels.net/kisao
✔ Suggest terms ✔ Submit bugs
✔ Download ✔ libKiSAO
[email protected] (Anna Zhukova)
Nat
ure
Pre
cedi
ngs
: doi
:10.
1038
/npr
e.20
11.6
330.
1 : P
oste
d 3
Sep
201
1
