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croFGD manual for users
Homepage
update news
visitor tracking
Search one gene for detailed information
Gene detail information
functional annotation and data source
top three hits in Arabidopsis
top300 PCC genelist, PPI, miRNA-target and link to
correspoding network
functional module including the query gene
location information
Gbrowser and UCSC visulization
DNA, cds, transcript and protein sequence
gene ontology
gene family and subfamily
Gene detail information
KEGG pathway predicted by GhostKOALA
plantCyc pathway
Pfam domain
bar chart according to FPKM in all samples
Network input one gene or genelist
global network tissue-preferential analysis treat-response analysis
further analysis
Network compare
Network comparsion results
two network member expression profiles
Module search
Functional module search results
all functional module detailed information
Gene family
family
family members link to global network page
KEGG pathway
indole alkaloid biosynthesis
pathway member information
miRNA infor
miRNA expression profile
Gbrowser and UCSC visualization
miRNA target info
miRNA seq and struture info
miRNA location info
program select
submit sequence in fasta
parameter select
Tools: blast Blast results
Tools: motif analysis
sequence scan
motif analysis
input your interested motif
Tools: gene set enrichment analysis
choose geneset
input genelist
GSEA analysis result:
Tools: functional module enrichment analysis
module enrichment analysis result:
input genelist
parameter select
Download page
miRNA target functional modules
miRNA target network and the expression profiles of target genes
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