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Isolation and Characterization of
Mycobacteriophages Isolated from Tropical Soils
of Puerto Rico.
Mónica Rivera-TorresCharlene Rivera-Bonet
Mentor: Dr. Michael RubinUniversity of Puerto Rico at Cayey
RISE Program
Introduction Bacteriophages: virus that infect bacteria
Structure: Head with DNA and tail
Life Cycles: Lytic and Lysogenic
Mycobacteriophages: affect Mycobacteria
Significance / Advantages
Phage therapy
Template for research and discovery of emerging bacteriophages
Novel genes
HypothesisWe will be able to find bacteriophages in our soil sample because of its condition and the location it was collected from.
Materials Agar plates
Top Agar
Phage buffer
M. smegmatis culture
Centrifuge
Incubator
Phages
Methodology
Isolate Phage
Prepare Filtrate
Plaque Screening
Plaque Purification
Web Patterns
(Dilutions)
High titter Assay
MethodsSoil Sample Collection
-Date: February 18, 2013- Time: 7:30 pm- Aprox. air temp: 73ºF- 1 inch from ground surface- Moisture: somewhat moist- GPS: 18.23657 N 66.04429 W- Caguas, PR, 00727- 6inches from cement sidewalk- 2ft from a house- 10ft from a large tree
Methods
Enrichment:o Measure 0.5g of soil and add them into the
solution prepared in a 50mL tube. (Solution contains: sterile water, sterile 10x broth, AD supplement, CaCl2, and bacteria)
o Incubate at 37 °C, 220rpm for 24 hours.
Methods
Harvesting: o Centrifuge.o Pour supernatant into new 50mL tube.o Label, filter and cap.o Plaque:• Streak the filtering across the agar. 1, 1 2,
2 3• Add top agar with bacteria and incubate.
Methods
Plaque Purificationo Add 50uL of Phage Buffer to a labeled tube.o Circle the phage you want to purify and insert
micropipette tip into the phage.o Place it in the phage buffer.o Repeat the plaque process.
MethodsSecond Enrichment and filtration
Dilutions
High Titer Assay
ResultsPhages found in first try
o Monchar
Results1st Plaque Purification
Higher Concentration
Lower Concentration
Least Concentration
Results
2nd Plaque Purification Successful
3rd Plaque Purification Six times unsuccessful
Results A second 2nd Plaque
Purification was made but this one also came out wrong.
Conclusion Our hypothesis was proven correct. The soil from where we did our collection was
fertilized with compost Another factor that could have affected our
discovery was the temperature. Unwillingly, we only reached the second plaque
purification due to a series of misfortunate events concerning bad bacteria, or unwanted colonies forming.
Further research can be done in order to characterize this phage and conclude its functionality in the field of medicine.
Acknowledgements Lab Technician: Giovanni Cruz
Christopher
Dr. Michael Rubin
RISE Program
Questions?
https://www.google.com.pr/search?hl=es&site=imghp&tbm=isch&source=hp&biw=1024&bih=768&q=mycobacteriophage&oq=mycobacteriophage&gs_l=img.3..0i19l2.2242.7185.0.7748.17.5.0.12.12.0.138.658.0j5.5.0...0.0...1ac.1.12.img.S0O6D-rk7lY#hl=es&site=imghp&tbm=isch&sa=1&q=bacteriophage&oq=bacteriophage&gs_l=img.3..0l2j0i24l8.5730.5730.0.6605.1.1.0.0.0.0.165.165.0j1.1.0...0.0...1c.1.12.img.M_R1Ayx_SdQ&bav=on.2,or.r_qf.&bvm=bv.46471029,d.dmQ&fp=42cbaab53757bd28&biw=1024&bih=768