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We Monitor Drug Discovery On The Internet, 24/7 Using The Latest Text-Analytics Tools
Science Professionals Use Our Data, Developers Use Our Software
Data Intelligence
Text Analysis
SciBite.com
SciBite.com: A free “Twi9er®” like news feed for pharma & biotech
SciBite Plus: A rich therapeuCc intelligence dashboard for scienCfic & business analysts
SciBite API: Access to a rich data feed for data-‐mining in target discovery and drug repurposing
Termite: A highly-‐tuned text-‐mining engine for pharma and biotechnology
Termite-‐Search: Powerful detecCon of biomedical topics in text
Termite-‐Ontologies: Ontologies and text-‐mining thesauri for life science industry
What is Therapeutic Intelligence?
I care about asthma.
What does the current landscape of (Drugs, Targets, Companies, Trials,
Collabora:ons…) look like?
SciBite.com
Well, a bit like this actually >>
Coloured bars tell us type of arCcle (news, patent, paper…)
SemanCc tags tell us exactly which topics menConed, regardless of synonyms
Spikes when interesCng stuff happening
Never miss a thing, email or RSS updates
Not just “things”, context too.
Scibite.com: “.. like Twitter® for Pharma..”
Best of all, its completely free! SciBite.com
But That’s Just The Tip Of The Iceberg
Our database contains millions of papers, clinical trials summaries, grants,
patents, news arCcles, blog posts, Tweets, press releases, FDA noCces and
much more…
SciBite.com
Interrogate Our Data, Understand The Landscape >>
NewsScape plot shows topic-‐topic relaConships by Cme and frequency
InteracCve charts highlighCng hot targets, drugs, companies, indicaCons
SciBite Plus: Understand & Exploit The Drug Discovery Landscape
SciBite.com
Commercial Landscape map shows who’s working on your target… for what.
Target relaConship matrix, find new targets by precedence
& Much More Coming Soon…..
h9p://scibite.com/site/p3/prod/scibite_api.html
SciBite API : A World Of Opportunity For Data Miners
SciBite.com
Termite® The SciBite Text-Mining Engine
SciBite.com
Termite Makes Text-Mining Easy • Simple architecture, runs on any Unix/Linux/OSX system • High throughput, easily scaled to process MB of text per second • “On-demand” and batch-mode processing • Combines thesauri and algorithms in a best-of-both platform • Professionally curated modules to identify gene, disease, side effect,
biochemical, companies, procedures, drugs, cells, and many more
Termite Is Uniquely Tuned For Biomedicine • There are many text-mining tools out there, but none of them provide
the range of capabilities offered by Termite • While other engines struggle with the ambiguity of everyday
biomedical text, Termite embraces it. • For example:
• Termite knows when “GSK” means Glucose Synthase Kinase and when it means GlaxoSmithKline
• Termite knows when “Hedgehog” means the developmental protein and not the animal
• Termite knows that ERK1/2 means the proteins ERK1 and ERK2
• Termite knows there are at least five diseases known as “Pick Disease” and can work out which exact one the text concerns
For many more examples where other engines fail, see our presentaCon: h9p://www.slideshare.net/scibitely/termite-‐dealing-‐with-‐real-‐world
Try Termite Now! Go to h9p://scibite.com/site/p3/webconnect.html
Then find an article http://www.ncbi.nlm.nih.gov/pubmed/23144792
Install The Bookmarklet Watch Termite In Action
Internal installa7on for private documents is available SciBite.com
Augmenting Enterprise Search
Document Repositories
Extracted Files
Termite Enhancement
SemanCc “Tags”
Your search tool here
Generic Search Tools Just Don’t Cut It! • Standard Enterprise Search systems are
built to serve a wide audience. They can’t deal with the nuances of biomedicine
• Which means your users get annoyed when they can’t find the right drug, target or indication
• Termite can be installed as part of your indexing workflow, creating rich (and correct) meta-data that allows users to search more accurately
• Documents can be extracted and tagged in batch, or on-the-fly using the Termite-On-Demand web service
SciBite.com
.. And Now… Cell Line Species InvesCgaCve Procedure Phenotype MedDRA
Termite Ontologies & Thesauri
Custom Ontologies Created For You Extensive ontologies and thesauri, curated by experts with decades of drug-‐discovery experience
SciBite.com
