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How to Use Tutorial for the Non-Coding RNA Databases Resource, an integrative resource for non-coding RNA research.
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Tutorial:
Searching on NRDR 2.0
This tutorial shows you how to perform the following 4 searches in NRDR 2.0:
• Searching siRNAs involved in Cancer
• Searching human miRNAs in databases with similarity search tool
• Searching databases containing FASTA files for download
• Downloading all sequences available for Arabidopsis thaliana
Example 1 Searching siRNAs involved in Cancer
* Speficy cancer as a word in Overview
* Select siRNA as ncRNA class
Example 1 Searching siRNAs involved in Cancer
* Click here to continue
Example 1 Searching siRNAs involved in Cancer
Example 1 Searching siRNAs involved in Cancer
You should see something like this:
Example 1 Searching siRNAs involved in Cancer
* Click here to see more information about this
You should see something like this:
Example 2 Searching human miRNAs in databases with similarity
search tool
* Specify Homo sapiens as organism
Example 2 Searching human miRNAs in databases with similarity
search tool
* Select miRNA as ncRNA class
Example 2 Searching human miRNAs in databases with similarity
search tool
* Specify Similarity as search method
Example 2 Searching human miRNAs in databases with similarity
search tool
* Click here to continue
Example 2 Searching human miRNAs in databases with similarity
search tool
You should see something like this:
Example 3 Searching databases containing FASTA files for
download
* Only specify FASTA in download type
* Click here to continue
Example 3 Searching databases containing FASTA files for
download
You should see something like this:
Example 3 Searching databases containing FASTA files for
download
Example 4 Downloading all sequences available for Arabidopsis
thaliana
* Click on Download at the Main menu
Example 4 Downloading all sequences available for Arabidopsis
thaliana
* Specify Arabidopsis thaliana as your organism
Thank You!
For feedback, comments, suggestions or criticisms please contact us at: paschoal AT utfpr.edu.br