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DNA Mutations and Mutagenesis
MPH1-19-15
Learning Objectives
• By the end of this lecture……….we all should be able to appreciate:
– The definition of mutation
– Chromosome and gene mutations
– Types of Mutagens
Mutation
A heritable alteration or change in the genetic material.
Why mutations occur?
• Spontaneously
• Exposure to mutagens
Types of Mutation
Types of Mutations
Substitution
Substitution• A substitution is the replacement of a single nucleotide by
another. • Most common type of mutation. • If substitution involves replacement by the same type of
nucleotide• Two types:
– Transition: (More frequent) • A pyrimidine for a pyrimidine (C for T or vice versa)• A purine for a purine (A for G or vice versa);
– Transversion: • A pyrimidine by a purine • A purine for a pyramidine
Substitution/Point Mutation
Deletion
• Loss of one or more nucleotides.
– Small deletions may lead to frame shift
– Larger deletions may result in partial or complete gene deletions and may arise through unequal crossover.
Insertion
Insertion
• An insertion involves the addition of one or more nucleotides into
• a gene. • Small insertions may lead to frame shift.
• Tri-nucleotide repeat sequences
Unstable trinucleotide repeats may be within coding or non-coding regions of genes and hence vary in their pathogenic mechanisms
Frameshift Mutation
Chromosomal Rearrangements
Trinucleotide Repeats
Trinucleotide repeats
Polymorphisms
Sequence variants with no obvious effect upon phenotype may be termed polymorphisms.
Structural Effects of mutations
• Non-synonymous mutations
– Missence
– Nonsence
– Frameshift
• Synonymous mutations
Non-synonymous mutations
If a mutation leads to an alteration in the encoded polypeptide, it is known as a non-
synonymous mutation.
Missense Mutations
A single base-pair substitution can result in coding for a different amino acid and the
synthesis of an altered protein, a so-called missense mutation.
Nonsense Mutations
A substitution that leads to the generation of one of the stop codons will result in
premature termination of translation of a peptide chain, or what is termed a
nonsense mutation.
Frameshift mutations
If a mutation involves the insertion or deletion of nucleotides that are not a multiple of
three, it will disrupt the reading frame and constitute a frameshift mutation.
MUTATIONS IN NON-CODING DNA
• In general, mutations in non-coding DNA are less likely to have a phenotypic effect.
• Exceptions include mutations in promoter sequences or other regulatory regions that affect the level of gene expression.
• Mutations in miRNA or siRNA binding sites within UTRs are also likely to result in disease
What causes mutations?
Spontaneous Mutations Mistakes in replication
Induced Mutations Caused by a mutagen
Mutagens •Chemical •Physical
Radiation can cause mutations
Effects of UV RadiationThymine dimers
Base pairing on opposite strand does not occur
Polymerase skips during replication
Fortunately these are repaired
Effect of UV on DNA structure
Ionizing radiation•Any radiation capable of displacing electrons from atoms or molecules, thereby producing ions. •Causes breaks in the phosphodiesterbackbone, DNA cannot be replicated unless repaired•Some examples are alpha, beta, gamma, and X-rays•Causes formation of free radicals, and toxic oxygen
.