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APRIL 29, 2016 PEGS, BOSTON DISCOVERY AND CHARACTERIZATION OF A HIGH POTENCY ANTI-INFLAMMATORY TRISPECIFIC TNF/IL-17A/IL-17F INHIBITOR

Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

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Page 1: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

DISCOVERY AND CHARACTERIZATION OF A HIGH POTENCY ANTI-INFLAMMATORY

TRISPECIFIC TNF⍺/IL-17A/IL-17F INHIBITOR

Page 2: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

AUTHORSS. AGEEV A. ULITIN E. ZUBAREVA I. USTUGOV D. KORZHAVIN E. LOMKOVA V. SOLOVJEV E. SOFRONOVA V. EKIMOVA

A. ALEXANDROV A. KARABELSKY Y. BASOVSKIY V. USATOVA T. CHERNOVSKAYA E. MOROZOVA A. GRACHEV R. IVANOV D. MOROZOV

PRESENTER:

PAVEL YAKOVLEV

APRIL 29, 2016 PEGS, BOSTON

Page 3: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

BCD 121

OctetRED96 measurement demonstrated that BCD 121

is capable to simultaneous non-completitive IL-17A

and TNF ligand binding.

Blue lines — added 1 mkg/ml TNFa

Red and green — without TNFa

Page 4: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

YEAR 2012

Page 5: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

YEAR 2012

SAINT-PETERSBURG

Page 6: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

YEAR 2012

SAINT-PETERSBURG MOSCOW

Page 7: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

YEAR 2012

SAINT-PETERSBURG MOSCOW

PHAGE DISPLAY

Page 8: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

YEAR 2012

SAINT-PETERSBURG MOSCOW

PHAGE DISPLAY 454 SEQUENCING SYSTEMS

Page 9: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

YEAR 2012

SAINT-PETERSBURG MOSCOW

PHAGE DISPLAY 454 SEQUENCING SYSTEMS

IL17A

Page 10: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

454 SEQUENCING SYSTEMS

Page 11: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

ANTIBODY ANNOTATION

V/D/J GENESFR/CDR

SOMATIC MUTATIONS

GERMLINE FAMILIES

Page 12: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

PATTERN MINING

FR1 CDR1 FR2 CDR2 FR3QVQLVQSGAEVKKPGASVKVSCKASGYTFT G--YYMH WVRQAPGQGLEWMG WINP--NSGGTNYAQKFQG RVTMTRDTSISTAYMELSRLRSDDTAVYYCARQVQLVQSGAEVKKPGASVKVSCKASGYTFT S--YAMH WVRQAPGQRLEWMG WINA--GNGNTKYSQKFQG RVTITRDTSASTAYMELSSLRSEDTAVYYCARQVQLVQSGAEVKKPGASVKVSCKASGYTFT S--YDIN WVRQATGQGLEWMG WMNP--NSGNTGYAQKFQG RVTMTRNTSISTAYMELSSLRSEDTAVYYCARQVQLVQSGAEVKKPGASVKVSCKASGYTFT S--YGIS WVRQAPGQGLEWMG WISA--YNGNTNYAQKLQG RVTMTTDTSTSTAYMELRSLRSDDTAVYYCARQVQLVQSGAEVKKPGASVKVSCKVSGYTLT E--LSMH WVRQAPGKGLEWMG GFDP--EDGETIYAQKFQG RVTMTEDTSTDTAYMELSSLRSEDTAVYYCATQMQLVQSGAEVKKTGSSVKVSCKASGYTFT Y--RYLH WVRQAPGQALEWMG WITP--FNGNTNYAQKFQD RVTITRDRSMSTAYMELSSLRSEDTAMYYCARQVQLVQSGAEVKKPGASVKVSCKASGYTFT S--YYMH WVRQAPGQGLEWMG IINP--SGGSTSYAQKFQG RVTMTRDTSTSTVYMELSSLRSEDTAVYYCARQMQLVQSGPEVKKPGTSVKVSCKASGFTFT S--SAVQ WVRQARGQRLEWIG WIVV--GSGNTNYAQKFQE RVTITRDMSTSTAYMELSSLRSEDTAVYYCAAQVQLVQSGAEVKKPGSSVKVSCKASGGTFS S--YAIS WVRQAPGQGLEWMG GIIP--IFGTANYAQKFQG RVTITADESTSTAYMELSSLRSEDTAVYYCARQVQLVQSGAEVKKPGSSVKVSCKASGGTFS S--YAIS WVRQAPGQGLEWMG GIIP--IFGTANYAQKFQG RVTITADKSTSTAYMELSSLRSEDTAVYYCAREVQLVQSGAEVKKPGATVKISCKVSGYTFT D--YYMH WVQQAPGKGLEWMG LVDP--EDGETIYAEKFQG RVTITADTSTDTAYMELSSLRSEDTAVYYCATQITLKESGPTLVKPTQTLTLTCTFSGFSLS TSGVGVG WIRQPPGKALEWLA LIY---WNDDKRYSPSLKS RLTITKDTSKNQVVLTMTNMDPVDTATYYCAHRQVTLKESGPVLVKPTETLTLTCTVSGFSLS NARMGVS WIRQPPGKALEWLA HIF---SNDEKSYSTSLKS RLTISKDTSKSQVVLTMTNMDPVDTATYYCARIQVTLKESGPALVKPTQTLTLTCTFSGFSLS TSGMRVS WIRQPPGKALEWLA RID---WDDDKFYSTSLKT RLTISKDTSKNQVVLTMTNMDPVDTATYYCARIEVQLVESGGGLVQPGGSLRLSCAASGFTFS S--YWMS WVRQAPGKGLEWVA NIKQ--DGSEKYYVDSVKG RFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREVQLVESGGGLVQPGRSLRLSCAASGFTFD D--YAMH WVRQAPGKGLEWVS GISW--NSGSIGYADSVKG RFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDQVQLVESGGGLVKPGGSLRLSCAASGFTFS D--YYMS WIRQAPGKGLEWVS YISS--SGSTIYYADSVKG RFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREVQLVESGGGLVQPGGSLRLSCAASGFTFS S--YDMH WVRQATGKGLEWVS AIG---TAGDTYYPGSVKG RFTISRENAKNSLYLQMNSLRAGDTAVYYCAREVQLVESGGGLVKPGGSLRLSCAASGFTFS N--AWMS WVRQAPGKGLEWVG RIKSKTDGGTTDYAAPVKG RFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTEVQLVESGGGVVRPGGSLRLSCAASGFTFD D--YGMS WVRQAPGKGLEWVS GINW--NGGSTGYADSVKG RFTISRDNAKNSLYLQMNSLRAEDTALYHCAREVQLVESGGGLVKPGGSLRLSCAASGFTFS S--YSMN WVRQAPGKGLEWVS SISS--SSSYIYYADSVKG RFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREVQLLESGGGLVQPGGSLRLSCAASGFTFS S--YAMS WVRQAPGKGLEWVS AISG--SGGSTYYADSVKG RFTISRDNSKNTLYLQMNSLRAEDTAVYYCAK

Page 13: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

PATTERN MATCHING

S

S

S AM

S

A

S

V T Y

Y

A

A A

S

V

Q

S

Y

T

S S

P

GS Y

R

RV

Y

L

E

I

L

P

DF

A

F

G

S

AA

C

S

W

V

R

QS

V

W

R

F

T

A

C

Y

Y

W

G

Q

A

Page 14: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

PATTERN MATCHING

S

S

F PM

G

G

G

G A H

Y

E

N D

F

V

K

W

N

I

G G

F

SY S

G

TD

Y

R

Y

G

T

DF

T

L

W

F

R

QA

V

F

R

F

A

A

C

Y

Y

W

G

Q

T

Page 15: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

ALIGNMENT-BASED ANNOTATION

5’ V

3’ J

Page 16: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

ALIGNMENT-BASED ANNOTATION

5’ V

3’ J3’ J

3’ J

Page 17: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

ALIGNMENT-BASED ANNOTATION

5’ V

3’ J

3’ J 3’ J

3’ J3’ J

5’ V 5’ V

Page 18: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

STRANGE SEQUENCES

Page 19: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

STRANGE SEQUENCES

VH3 family

Page 20: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

STRANGE SEQUENCES

VH3 family

Unnormal FR2

Page 21: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

STRANGE SEQUENCES

VH3 family

Unnormal FR2

Some unusual mutations in FR3

Page 22: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

STRANGE SEQUENCES

VH3 family

Unnormal FR2

Some unusual mutations in FR3

Enlarged CDR3

Page 23: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

VHH

Page 24: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

LEAD OPTIMIZATION PLAN

Make a classic Fv

Humanize heavy chain

Page 25: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

PAIRING VHH

VLVH

Page 26: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

HUMANIZATION

Page 27: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

HUMANIZATION

Page 28: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

HUMANIZATION

Page 29: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

HUMANIZATION

Page 30: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

AFFINITY MATURATION

Δ Affinity

Page 31: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

BCD 085

ANTI-IL17

Development Preclinical Studies I Phase II Phase III Phase Registration ✓

Page 32: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

AUTOMATIC PIPELINE

Page 33: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

ANTI-TNF⍺

TNF⍺

VH

VL

Page 34: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

CONSTRUCTION OF TRISPECIFIC

Page 35: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

CONSTRUCTION OF TRISPECIFIC

Page 36: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

CONSTRUCTION OF TRISPECIFIC

Page 37: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

BACK TO VHH

VL VH

Page 38: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

BACK TO VHH

VL VH

Page 39: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

BACK TO VHH

45T

44G

Page 40: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

BCD 085 VHH

VHH

IL17a

Page 41: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

BCD 121

CH

VH

CL

VL

VHH

Page 42: Discovery and Characterization of a High Potency Anti-Inflammatory Trispecific TNFα/IL-17A/IL-17F Inhibitor

APRIL 29, 2016 PEGS, BOSTON

[email protected]