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Topics spatial encoding - part 1

240 spatial encoding

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Page 1: 240 spatial encoding

Topics

• spatial encoding - part 1

Page 2: 240 spatial encoding

K-space, the path to MRI.K-space, the path to MRI.

ENTER IF YOU DAREENTER IF YOU DARE

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What is k-space?

• a mathematical device• not a real “space” in the patient nor in

the MR scanner• key to understanding spatial encoding

of MR images

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k-space and the MR Image

x

y

f(x,y)

kx

ky

K-spaceK-space

F(kx,ky)

Image-spaceImage-space

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k-space and the MR Image

• each individual point in the MR image is reconstructed from every point in the k-space representation of the image

– like a card shuffling trick: you must have all of the cards (k-space) to pick the single correct card from the deck

• all points of k-space must be collected for a faithful reconstruction of the image

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Discrete Fourier Transform

F(kx,ky) is the 2D discrete Fourier transform of the image f(x,y)

x

y

f(x,y)

kx

ky

K-space

F(kx,ky)

f x yN

F k k exk yk

kkx y

jN

x jN

yNN

yx

( , ) ( , )

12

2 2

0

1

0

1

image-space

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k-space and the MR Image

• If the image is a 256 x 256 matrix size, then k-space is also 256 x 256 points.

• The individual points in k-space represent spatial frequencies in the image.

• Contrast is represented by low spatial frequencies; detail is represented by high spatial frequencies.

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Low Spatial Frequency

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Higher Spatial Frequency

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low spatial frequencies

high spatial frequencies

allfrequencies

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Spatial Frequencies

• low frequency = contrast• high frequency = detail• The most abrupt change occurs at an

edge. Images of edges contain the highest spatial frequencies.

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Waves and Frequencies

• simplest wave is a cosine wave• properties

– frequency (f)– phase ()– amplitude (A)

f x A f x( ) cos ( ) 2

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Cosine Waves ofdifferent frequencies

-1

-0.8

-0.6

-0.4

-0.2

0

0.2

0.4

0.6

0.8

1

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Cosine Waves ofdifferent amplitudes

-4

-3

-2

-1

0

1

2

3

4

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Cosine Waves ofdifferent phases

-1

-0.8

-0.6

-0.4

-0.2

0

0.2

0.4

0.6

0.8

1

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k-space Representation of Waves

image space, f=4 k-space

-128 -96 -64 -32 0 32 64 96 128

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k-space Representation of Waves

image space, f=16 k-space

-128 -96 -64 -32 0 32 64 96 128

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k-space Representation of Waves

image space, f=64 k-space

-128 -96 -64 -32 0 32 64 96 128

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Complex Waveform Synthesis

f4 + 1/2 f16 + 1/4 f32

Complex waveforms can besynthesized by adding simplewaves together.

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k-space Representation of Complex Waves

f4 + 1/2 f16 + 1/4 f32

-128 -96 -64 -32 0 32 64 96 128

image space k-space

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k-space Representation of Complex Waves

“square” wave

image space k-space

-128 -96 -64 -32 0 32 64 96 128

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Reconstruction of square wave from truncated k-space

truncated space (16)

image space k-space

-128 -96 -64 -32 0 32 64 96 128

reconstructed waveform

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Reconstruction of square wave from truncated k-space

truncated space (8)

image space k-space

-128 -96 -64 -32 0 32 64 96 128

reconstructed waveform

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Reconstruction of square wave from truncated k-space

truncated space (240)

image space k-space

-128 -96 -64 -32 0 32 64 96 128

reconstructed waveform

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Properties of k-space

• k-space is symmetrical• all of the points in k-space must be known

to reconstruct the waveform faithfully • truncation of k-space results in loss of

detail, particularly for edges• most important information centered

around the middle of k-space• k-space is the Fourier representation of the

waveform

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MRI and k-space

• The nuclei in an MR experiment produce a radio signal (wave) that depends on the strength of the main magnet and the specific nucleus being studied (usually H+).

• To reconstruct an MR image we need to determine the k-space values from the MR signal.

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RF signal

A/Dconversion

image space

FT

k-space

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MRI

• Spatial encoding is accomplished by superimposing gradient fields.

• There are three gradient fields in the x, y, and z directions.

• Gradients alter the magnetic field resulting in a change in resonance frequency or a change in phase.

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MRI• For most clinical MR imagers using

superconducting main magnets, the main magnetic field is oriented in the z direction.

• Gradient fields are located in the x, y, and z directions.

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MRI

• The three magnetic gradients work together to encode the NMR signal with spatial information.

• Remember: the resonance frequency depends on the magnetic field strength. Small alterations in the magnetic field by the gradient coils will change the resonance frequency.

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Gradients

• Consider the example of MR imaging in the transverse (axial) plane.

Z gradient: slice select X gradient: frequency encode (readout) Y gradient: phase encode

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Slice Selection

• For axial imaging, slice selection occurs along the long axis of the magnet.

• Superposition of the slice selection gradient causes non-resonance of tissues that are located above and below the plane of interest.