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Why I blog instead of writing papers @rdmpage http://iphylo.blogspot.com

Why I blog instead of writing papers

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Keynote given at PopGroup 46 meeting in Glasgow, 21 December 2012

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Page 1: Why I blog instead of writing papers

Why I blog instead of writing papers

@rdmpage

http://iphylo.blogspot.com

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Blogging

Facebook

Twitter

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Blogging

Facebook

Twitter

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Why blog?

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Rants, raves (and occasionally considered opinions) on phyloinformatics, taxonomy, and biodiversity informatics. For more ranty and less considered opinions, see my Twitter feed.

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What sort of things do I blog about?

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Rants

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Reviews

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Experiments

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Grant proposals

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NERC said NO

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Analyses

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Dark taxa

http://iphylo.blogspot.co.uk/2011/04/dark-taxa-genbank-in-post-taxonomic.html

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Mammals in GenBank

Proper Linnaean names

Aus sp.

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Mammals

Proper Linnaean names

Aus sp.

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“Invertebrates”

BOLD

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Is this a problem?

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It’s the norm for Bacteria

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Why blog?

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Déjà vu

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@cboettig

http://www.carlboettiger.info/2012/09/28/Welcome-to-my-lab-notebook.html

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Immediate feedback

(great if you are a shy attention seeker)

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Blogs can lead to conversations

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“Dark taxa” conversation 68 comments

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Isn’t it vanity publishing?

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Of course it is!

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Isn’t any publishing?

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Is your blog any good?

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Does it get cited?

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Citations to “dark taxa” blog post

An update on DNA barcoding: low species coverage and numerous unidentified sequenceshttp://dx.doi.org/10.1111/j.1096-0031.2012.00408.x

No name, no game http://dx.doi.org/10.5852/ejt.2012.10

Ramping up biodiversity discovery via online quantum contributions http://dx.doi.org/10.1016/j.tree.2011.10.010

Applications of Natural Language Processing in Biodiversity Science http://dx.doi.org/10.1155/2012/391574

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https://twitter.com/dpsspiders/status/281094052072542208

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What do I want for Christmas?

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DOIs for my blog posts

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What about peer review?

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Watson and Crick 1953

Not peer reviewed

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Peer review as filter

Physical and/or economic limits on how big a journal can be

Accept for publication

Submitted for publication

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Filter, then publish

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Peer review as filter

Physical and/or economic limits on how big a journal can be

Accept for publication

Submitted for publication

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…publish, then filter

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Attention filter

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Peer-review doesn’t guarantee science is correct

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NASA will hold a news conference at 2 p.m. EST on Thursday, Dec. 2 [2010], to discuss an

astrobiology finding that will impact the search for evidence of extraterrestrial life.

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A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus

Wolfe-Simon et al. 2010Science

doi:10.1126/science.1197258

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@RosieRedfield

(University of British Columbia)

Lots of flim-flam, but very little reliable information … If this data was presented by a PhD student at their committee meeting, I'd send them back to the bench to do more cleanup and controls.

http://rrresearch.fieldofscience.com/2010/12/arsenic-associated-bacteria-nasas.html

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https://twitter.com/ironlisa/statuses/11579028288839680

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NASA DID NOT HYPE anything – others did. Credible media organizations have not questioned NASA about any text. Bloggers and social media have.

NASA will hold a news conference at 2 p.m. EST on Thursday, Dec. 2, to discuss an astrobiology finding that will impact the search for evidence of extraterrestrial life.

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Absence of Detectable Arsenate in DNA from Arsenate-Grown GFAJ-1 Cells

Reaves et al. July 2012

Sciencedoi:10.1126/science.1219861

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Rebuttal in peer-reviewed literature

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but released as preprint…

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arXiv:1201.6643

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…and initial concerns raised on blog

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What’s next?

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Science as a process will be open

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figshare.com

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http://dx.doi.org/10.6084/m9.figshare.92668

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Everything of interest will be citable(papers, data, figures, blogs)

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http://www.altmetric.com/

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http://impactstory.org/

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… and that is why I blog instead of writing papers