Department of Bioinformatics - BiGCaT 1

Correlating time spent onexercises with exam results inProtein Structure education

Egon Willighagen, @egonwillighagenDept. of Bioinformatics - BiGCaT - Maastricht University

orcid.org/0000-0001-7542-0286

ACS New Orleans, 10 April 2013, #ACSNola

Department of Bioinformatics - BiGCaT 2

Disclaimer

• I am an interested scientist...–Basic Teaching Qualification–… with interest in getting students

smarter

• The data is not ready yet :(

Department of Bioinformatics - BiGCaT 3

Context of this study

• To learn about the variation within the student population–By recording what they do

• To increase the internal motivation by encouraging to their interest–By allowing them to go beyond the

learning goals

Department of Bioinformatics - BiGCaT 4

A uniform student population?

Source: WikiPedia

Department of Bioinformatics - BiGCaT 5

But what about bimodal? Or ...

Source: WikiPedia

Department of Bioinformatics - BiGCaT 6

Cognitive Load

1. Learning goals– “Intrinsic cognitive load”

2. Learning the tools– “Extraneous cognitive load”

J. Leppink et al. Behavior ResearchMethods, 2013, p1-15

Department of Bioinformatics - BiGCaT 7

Teaching Protein Structure

Department of Bioinformatics - BiGCaT 8

Needs

• Visualisation• Interactive• Records

→ Bioclipse … JavaScript … yeah, sure does!

Department of Bioinformatics - BiGCaT 9

Integration platform: Bioclipse

Spjuth, O et al. BMC bioinformatics 2007 8(1):59.

Department of Bioinformatics - BiGCaT 10

Hanson, RM. Appl Cryst 2010 43(5):1250-1260.

Department of Bioinformatics - BiGCaT 11

JavaScripting (...)

Department of Bioinformatics - BiGCaT 12

“Cheat sheets”

Department of Bioinformatics - BiGCaT 13

Department of Bioinformatics - BiGCaT 14

Recording & Reporting

Department of Bioinformatics - BiGCaT 15

Results

• Teaching material in a versatile environment

• It can record and report progress of the student (e.g. to a central server)

• The timing results give us a multivariate view on the student population

Department of Bioinformatics - BiGCaT 16

Acknowledgements

• Uppsala University–Ola Spjuth, Jonathan

Alvarsson, Arvid Berg

• Jmol–Bob Hanson, Nicolas

Vervelle, Angel Herraez

• http://bioclipse.net• http://jmol.org

@egonwillighagen

orcid.org/0000-0001-7542-0286

egonw.github.com