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Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings PowerPoint ® Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley with contributions from Joan Sharp Chapter 6 A Tour of the Cell

Chapter 6 Presentation

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Page 1: Chapter 6 Presentation

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

PowerPoint® Lecture Presentations for

Biology Eighth Edition

Neil Campbell and Jane Reece

Lectures by Chris Romero, updated by Erin Barley with contributions from Joan Sharp

Chapter 6Chapter 6

A Tour of the Cell

Page 2: Chapter 6 Presentation

Overview: The Fundamental Units of Life

• All organisms are made of cells

• The cell is the simplest collection of matter that can live

• Cell structure is correlated to cellular function

• All cells are related by their descent from earlier cells

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 3: Chapter 6 Presentation

Fig. 6-1

Page 4: Chapter 6 Presentation

Concept 6.1: To study cells, biologists use microscopes and the tools of biochemistry

• Though usually too small to be seen by the unaided eye, cells can be complex

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Page 5: Chapter 6 Presentation

Microscopy

• Scientists use microscopes to visualize cells too small to see with the naked eye

• In a light microscope (LM), visible light passes through a specimen and then through glass lenses, which magnify the image

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Page 6: Chapter 6 Presentation

• The quality of an image depends on

– Magnification, the ratio of an object’s image size to its real size

– Resolution, the measure of the clarity of the image, or the minimum distance of two distinguishable points

– Contrast, visible differences in parts of the sample

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Page 7: Chapter 6 Presentation

Fig. 6-210 m

1 m

0.1 m

1 cm

1 mm

100 µm

10 µm

1 µm

100 nm

10 nm

1 nm

0.1 nm Atoms

Small molecules

Lipids

Proteins

Ribosomes

Viruses

Smallest bacteria

Mitochondrion

Nucleus

Most bacteria

Most plant and animal cells

Frog egg

Chicken egg

Length of some nerve and muscle cells

Human height

Un

aid

ed e

ye

Lig

ht

mic

rosc

op

e

Ele

ctro

n m

icro

sco

pe

Page 8: Chapter 6 Presentation

• LMs can magnify effectively to about 1,000 times the size of the actual specimen

• Various techniques enhance contrast and enable cell components to be stained or labeled

• Most subcellular structures, including organelles (membrane-enclosed compartments), are too small to be resolved by an LM

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Page 9: Chapter 6 Presentation

Fig. 6-3TECHNIQUE RESULTS

(a) Brightfield (unstained specimen)

(b) Brightfield (stained specimen)

50 µm

(c) Phase-contrast

(d) Differential-interference- contrast (Nomarski)

(e) Fluorescence

(f) Confocal

50 µm

50 µm

Page 10: Chapter 6 Presentation

Fig. 6-3ab

(a) Brightfield (unstained specimen)

(b) Brightfield (stained specimen)

TECHNIQUE RESULTS

50 µm

Page 11: Chapter 6 Presentation

Fig. 6-3cd

(c) Phase-contrast

(d) Differential-interference- contrast (Nomarski)

TECHNIQUE RESULTS

Page 12: Chapter 6 Presentation

Fig. 6-3e

(e) Fluorescence

TECHNIQUE RESULTS

50 µm

Page 13: Chapter 6 Presentation

Fig. 6-3f

(f) Confocal

TECHNIQUE RESULTS

50 µm

Page 14: Chapter 6 Presentation

• Two basic types of electron microscopes (EMs) are used to study subcellular structures

• Scanning electron microscopes (SEMs) focus a beam of electrons onto the surface of a specimen, providing images that look 3-D

• Transmission electron microscopes (TEMs) focus a beam of electrons through a specimen

• TEMs are used mainly to study the internal structure of cells

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Page 15: Chapter 6 Presentation

Fig. 6-4

(a) Scanning electron microscopy (SEM)

TECHNIQUE RESULTS

(b) Transmission electron microscopy (TEM)

Cilia

Longitudinalsection ofcilium

Cross sectionof cilium

1 µm

1 µm

Page 16: Chapter 6 Presentation

Cell Fractionation

• Cell fractionation takes cells apart and separates the major organelles from one another

• Ultracentrifuges fractionate cells into their component parts

• Cell fractionation enables scientists to determine the functions of organelles

• Biochemistry and cytology help correlate cell function with structure

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Page 17: Chapter 6 Presentation

Fig. 6-5

Homogenization

TECHNIQUE

HomogenateTissuecells

1,000 g(1,000 times theforce of gravity)

10 min Differential centrifugation

Supernatant pouredinto next tube

20,000 g20 min

80,000 g60 minPellet rich in

nuclei andcellular debris

Pellet rich inmitochondria(and chloro-plasts if cellsare from a plant)

Pellet rich in“microsomes”(pieces of plasmamembranes andcells’ internalmembranes)

150,000 g3 hr

Pellet rich inribosomes

Page 18: Chapter 6 Presentation

Fig. 6-5a

Homogenization

Homogenate

Differential centrifugation

Tissuecells

TECHNIQUE

Page 19: Chapter 6 Presentation

Fig. 6-5b

1,000 g(1,000 times the force of gravity)

10 min

Supernatant poured into next tube

20,000 g20 min

80,000 g60 min

150,000 g3 hr

Pellet rich in nuclei and cellular debris

Pellet rich in mitochondria (and chloro-plasts if cellsare from a plant)

Pellet rich in “microsomes” (pieces of plasmamembranes and cells’ internal membranes) Pellet rich in

ribosomes

TECHNIQUE (cont.)

Page 20: Chapter 6 Presentation

Concept 6.2: Eukaryotic cells have internal membranes that compartmentalize their functions

• The basic structural and functional unit of every organism is one of two types of cells: prokaryotic or eukaryotic

• Only organisms of the domains Bacteria and Archaea consist of prokaryotic cells

• Protists, fungi, animals, and plants all consist of eukaryotic cells

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Page 21: Chapter 6 Presentation

Comparing Prokaryotic and Eukaryotic Cells

• Basic features of all cells:

– Plasma membrane

– Semifluid substance called cytosol

– Chromosomes (carry genes)

– Ribosomes (make proteins)

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Page 22: Chapter 6 Presentation

• Prokaryotic cells are characterized by having

– No nucleus

– DNA in an unbound region called the nucleoid

– No membrane-bound organelles

– Cytoplasm bound by the plasma membrane

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Page 23: Chapter 6 Presentation

Fig. 6-6

Fimbriae

Nucleoid

Ribosomes

Plasma membrane

Cell wall

Capsule

Flagella

Bacterialchromosome

(a) A typical rod-shaped bacterium

(b) A thin section through the bacterium Bacillus coagulans (TEM)

0.5 µm

Page 24: Chapter 6 Presentation

• Eukaryotic cells are characterized by having

– DNA in a nucleus that is bounded by a membranous nuclear envelope

– Membrane-bound organelles

– Cytoplasm in the region between the plasma membrane and nucleus

• Eukaryotic cells are generally much larger than prokaryotic cells

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Page 25: Chapter 6 Presentation

• The plasma membrane is a selective barrier that allows sufficient passage of oxygen, nutrients, and waste to service the volume of every cell

• The general structure of a biological membrane is a double layer of phospholipids

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Page 26: Chapter 6 Presentation

Fig. 6-7TEM of a plasmamembrane

(a)

(b) Structure of the plasma membrane

Outside of cell

Inside ofcell 0.1 µm

Hydrophilicregion

Hydrophobicregion

Hydrophilicregion Phospholipid Proteins

Carbohydrate side chain

Page 27: Chapter 6 Presentation

• The logistics of carrying out cellular metabolism sets limits on the size of cells

• The surface area to volume ratio of a cell is critical

• As the surface area increases by a factor of n2, the volume increases by a factor of n3

• Small cells have a greater surface area relative to volume

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Page 28: Chapter 6 Presentation

Fig. 6-8Surface area increases while

total volume remains constant

5

11

6 150 750

125 1251

6 61.2

Total surface area

[Sum of the surface areas

(height width) of all

boxes

sides number of boxes]Total volume

[height width length number of boxes]

Surface-to-volume

(S-to-V) ratio

[surface area ÷ volume]

Page 29: Chapter 6 Presentation

A Panoramic View of the Eukaryotic Cell

• A eukaryotic cell has internal membranes that partition the cell into organelles

• Plant and animal cells have most of the same organelles

BioFlix: Tour Of An Animal CellBioFlix: Tour Of An Animal Cell

BioFlix: Tour Of A Plant CellBioFlix: Tour Of A Plant Cell

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Page 30: Chapter 6 Presentation

Fig. 6-9a

ENDOPLASMIC RETICULUM (ER)

Smooth ERRough ERFlagellum

Centrosome

CYTOSKELETON:

Microfilaments

Intermediatefilaments

Microtubules

Microvilli

Peroxisome

MitochondrionLysosome

Golgiapparatus

Ribosomes

Plasma membrane

Nuclearenvelope

Nucleolus

Chromatin

NUCLEUS

Page 31: Chapter 6 Presentation

Fig. 6-9b

NUCLEUS

Nuclear envelopeNucleolus

Chromatin

Rough endoplasmic reticulum

Smooth endoplasmic reticulum

Ribosomes

Central vacuole

Microfilaments

Intermediate filaments

Microtubules

CYTO-SKELETON

Chloroplast

PlasmodesmataWall of adjacent cell

Cell wall

Plasma membrane

Peroxisome

Mitochondrion

Golgiapparatus

Page 32: Chapter 6 Presentation

Concept 6.3: The eukaryotic cell’s genetic instructions are housed in the nucleus and carried out by the ribosomes

• The nucleus contains most of the DNA in a eukaryotic cell

• Ribosomes use the information from the DNA to make proteins

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Page 33: Chapter 6 Presentation

The Nucleus: Information Central

• The nucleus contains most of the cell’s genes and is usually the most conspicuous organelle

• The nuclear envelope encloses the nucleus, separating it from the cytoplasm

• The nuclear membrane is a double membrane; each membrane consists of a lipid bilayer

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Page 34: Chapter 6 Presentation

Fig. 6-10

NucleolusNucleus

Rough ER

Nuclear lamina (TEM)

Close-up of nuclear envelope

1 µm

1 µm

0.25 µm

Ribosome

Pore complex

Nuclear pore

Outer membraneInner membraneNuclear envelope:

Chromatin

Surface ofnuclear envelope

Pore complexes (TEM)

Page 35: Chapter 6 Presentation

• Pores regulate the entry and exit of molecules from the nucleus

• The shape of the nucleus is maintained by the nuclear lamina, which is composed of protein

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Page 36: Chapter 6 Presentation

• In the nucleus, DNA and proteins form genetic material called chromatin

• Chromatin condenses to form discrete chromosomes

• The nucleolus is located within the nucleus and is the site of ribosomal RNA (rRNA) synthesis

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Page 37: Chapter 6 Presentation

Ribosomes: Protein Factories

• Ribosomes are particles made of ribosomal RNA and protein

• Ribosomes carry out protein synthesis in two locations:

– In the cytosol (free ribosomes)

– On the outside of the endoplasmic reticulum or the nuclear envelope (bound ribosomes)

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Page 38: Chapter 6 Presentation

Fig. 6-11

Cytosol

Endoplasmic reticulum (ER)

Free ribosomes

Bound ribosomes

Large subunit

Small subunit

Diagram of a ribosomeTEM showing ER and ribosomes

0.5 µm

Page 39: Chapter 6 Presentation

Concept 6.4: The endomembrane system regulates protein traffic and performs metabolic functions in the cell

• Components of the endomembrane system:

– Nuclear envelope

– Endoplasmic reticulum

– Golgi apparatus

– Lysosomes

– Vacuoles

– Plasma membrane

• These components are either continuous or connected via transfer by vesicles

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Page 40: Chapter 6 Presentation

The Endoplasmic Reticulum: Biosynthetic Factory

• The endoplasmic reticulum (ER) accounts for more than half of the total membrane in many eukaryotic cells

• The ER membrane is continuous with the nuclear envelope

• There are two distinct regions of ER:

– Smooth ER, which lacks ribosomes

– Rough ER, with ribosomes studding its surface

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Page 41: Chapter 6 Presentation

Fig. 6-12Smooth ER

Rough ER Nuclear envelope

Transitional ER

Rough ERSmooth ERTransport vesicle

RibosomesCisternaeER lumen

200 nm

Page 42: Chapter 6 Presentation

Functions of Smooth ER

• The smooth ER

– Synthesizes lipids

– Metabolizes carbohydrates

– Detoxifies poison

– Stores calcium

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Page 43: Chapter 6 Presentation

Functions of Rough ER

• The rough ER

– Has bound ribosomes, which secrete glycoproteins (proteins covalently bonded to carbohydrates)

– Distributes transport vesicles, proteins surrounded by membranes

– Is a membrane factory for the cell

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Page 44: Chapter 6 Presentation

• The Golgi apparatus consists of flattened membranous sacs called cisternae

• Functions of the Golgi apparatus:

– Modifies products of the ER

– Manufactures certain macromolecules

– Sorts and packages materials into transport vesicles

The Golgi Apparatus: Shipping and Receiving Center

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Page 45: Chapter 6 Presentation

Fig. 6-13

cis face(“receiving” side of Golgi apparatus) Cisternae

trans face(“shipping” side of Golgi apparatus)

TEM of Golgi apparatus

0.1 µm

Page 46: Chapter 6 Presentation

Lysosomes: Digestive Compartments

• A lysosome is a membranous sac of hydrolytic enzymes that can digest macromolecules

• Lysosomal enzymes can hydrolyze proteins, fats, polysaccharides, and nucleic acids

Animation: Lysosome FormationAnimation: Lysosome Formation

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Page 47: Chapter 6 Presentation

• Some types of cell can engulf another cell by phagocytosis; this forms a food vacuole

• A lysosome fuses with the food vacuole and digests the molecules

• Lysosomes also use enzymes to recycle the cell’s own organelles and macromolecules, a process called autophagy

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Page 48: Chapter 6 Presentation

Fig. 6-14

Nucleus 1 µm

Lysosome

Digestiveenzymes

Lysosome

Plasmamembrane

Food vacuole

(a) Phagocytosis

Digestion

(b) Autophagy

Peroxisome

Vesicle

Lysosome

Mitochondrion

Peroxisomefragment

Mitochondrionfragment

Vesicle containingtwo damaged organelles

1 µm

Digestion

Page 49: Chapter 6 Presentation

Fig. 6-14aNucleus 1 µm

Lysosome

Lysosome

Digestive enzymes

Plasma membrane

Food vacuole

Digestion

(a) Phagocytosis

Page 50: Chapter 6 Presentation

Fig. 6-14bVesicle containingtwo damaged organelles

Mitochondrion fragment

Peroxisome fragment

Peroxisome

Lysosome

DigestionMitochondrionVesicle

(b) Autophagy

1 µm

Page 51: Chapter 6 Presentation

Vacuoles: Diverse Maintenance Compartments

• A plant cell or fungal cell may have one or several vacuoles

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Page 52: Chapter 6 Presentation

• Food vacuoles are formed by phagocytosis

• Contractile vacuoles, found in many freshwater protists, pump excess water out of cells

• Central vacuoles, found in many mature plant cells, hold organic compounds and water

Video: Paramecium VacuoleVideo: Paramecium Vacuole

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Page 53: Chapter 6 Presentation

Fig. 6-15

Central vacuole

Cytosol

Central vacuole

Nucleus

Cell wall

Chloroplast

5 µm

Page 54: Chapter 6 Presentation

The Endomembrane System: A Review

• The endomembrane system is a complex and dynamic player in the cell’s compartmental organization

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Page 55: Chapter 6 Presentation

Fig. 6-16-1

Smooth ER

Nucleus

Rough ER

Plasma membrane

Page 56: Chapter 6 Presentation

Fig. 6-16-2

Smooth ER

Nucleus

Rough ER

Plasma membrane

cis Golgi

trans Golgi

Page 57: Chapter 6 Presentation

Fig. 6-16-3

Smooth ER

Nucleus

Rough ER

Plasma membrane

cis Golgi

trans Golgi

Page 58: Chapter 6 Presentation

Concept 6.5: Mitochondria and chloroplasts change energy from one form to another

• Mitochondria are the sites of cellular respiration, a metabolic process that generates ATP

• Chloroplasts, found in plants and algae, are the sites of photosynthesis

• Peroxisomes are oxidative organelles

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Page 59: Chapter 6 Presentation

• Mitochondria and chloroplasts

– Are not part of the endomembrane system

– Have a double membrane

– Have proteins made by free ribosomes

– Contain their own DNA

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Page 60: Chapter 6 Presentation

Mitochondria: Chemical Energy Conversion

• Mitochondria are in nearly all eukaryotic cells

• They have a smooth outer membrane and an inner membrane folded into cristae

• The inner membrane creates two compartments: intermembrane space and mitochondrial matrix

• Some metabolic steps of cellular respiration are catalyzed in the mitochondrial matrix

• Cristae present a large surface area for enzymes that synthesize ATP

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Page 61: Chapter 6 Presentation

Fig. 6-17

Free ribosomesin the mitochondrial matrix

Intermembrane space

Outer membrane

Inner membraneCristae

Matrix

0.1 µm

Page 62: Chapter 6 Presentation

Chloroplasts: Capture of Light Energy

• The chloroplast is a member of a family of organelles called plastids

• Chloroplasts contain the green pigment chlorophyll, as well as enzymes and other molecules that function in photosynthesis

• Chloroplasts are found in leaves and other green organs of plants and in algae

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Page 63: Chapter 6 Presentation

• Chloroplast structure includes:

– Thylakoids, membranous sacs, stacked to form a granum

– Stroma, the internal fluid

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Page 64: Chapter 6 Presentation

Fig. 6-18

Ribosomes

Thylakoid

Stroma

Granum

Inner and outer membranes

1 µm

Page 65: Chapter 6 Presentation

Peroxisomes: Oxidation

• Peroxisomes are specialized metabolic compartments bounded by a single membrane

• Peroxisomes produce hydrogen peroxide and convert it to water

• Oxygen is used to break down different types of molecules

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Page 66: Chapter 6 Presentation

Fig. 6-19

1 µm

Chloroplast

Peroxisome

Mitochondrion

Page 67: Chapter 6 Presentation

Concept 6.6: The cytoskeleton is a network of fibers that organizes structures and activities in the cell

• The cytoskeleton is a network of fibers extending throughout the cytoplasm

• It organizes the cell’s structures and activities, anchoring many organelles

• It is composed of three types of molecular structures:– Microtubules– Microfilaments– Intermediate filaments

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Page 68: Chapter 6 Presentation

Fig. 6-20

Microtubule

Microfilaments0.25 µm

Page 69: Chapter 6 Presentation

Roles of the Cytoskeleton: Support, Motility, and Regulation

• The cytoskeleton helps to support the cell and maintain its shape

• It interacts with motor proteins to produce motility

• Inside the cell, vesicles can travel along “monorails” provided by the cytoskeleton

• Recent evidence suggests that the cytoskeleton may help regulate biochemical activities

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Page 70: Chapter 6 Presentation

Fig. 6-21

VesicleATP

Receptor for motor protein

Microtubuleof cytoskeleton

Motor protein (ATP powered)

(a)

Microtubule Vesicles

(b)

0.25 µm

Page 71: Chapter 6 Presentation

Components of the Cytoskeleton

• Three main types of fibers make up the cytoskeleton:

– Microtubules are the thickest of the three components of the cytoskeleton

– Microfilaments, also called actin filaments, are the thinnest components

– Intermediate filaments are fibers with diameters in a middle range

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Page 72: Chapter 6 Presentation

Table 6-1

10 µm 10 µm 10 µm

Column of tubulin dimers

Tubulin dimer

Actin subunit

25 nm

7 nm

Keratin proteins

Fibrous subunit (keratins coiled together)

8–12 nm

Page 73: Chapter 6 Presentation

Table 6-1a10 µm

Column of tubulin dimers

Tubulin dimer

25 nm

Page 74: Chapter 6 Presentation

Table 6-1b

Actin subunit

10 µm

7 nm

Page 75: Chapter 6 Presentation

Table 6-1c

5 µm

Keratin proteins

Fibrous subunit (keratinscoiled together)

8–12 nm

Page 76: Chapter 6 Presentation

Microtubules

• Microtubules are hollow rods about 25 nm in diameter and about 200 nm to 25 microns long

• Functions of microtubules:

– Shaping the cell

– Guiding movement of organelles

– Separating chromosomes during cell division

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Page 77: Chapter 6 Presentation

Centrosomes and Centrioles

• In many cells, microtubules grow out from a centrosome near the nucleus

• The centrosome is a “microtubule-organizing center”

• In animal cells, the centrosome has a pair of centrioles, each with nine triplets of microtubules arranged in a ring

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Page 78: Chapter 6 Presentation

Fig. 6-22Centrosome

Microtubule

Centrioles

0.25 µm

Longitudinal section of one centriole

Microtubules Cross sectionof the other centriole

Page 79: Chapter 6 Presentation

Cilia and Flagella

• Microtubules control the beating of cilia and flagella, locomotor appendages of some cells

• Cilia and flagella differ in their beating patterns

Video: Video: ChlamydomonasChlamydomonas Video: Video: Paramecium Paramecium CiliaCilia

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Page 80: Chapter 6 Presentation

Fig. 6-23

5 µm

Direction of swimming

(a) Motion of flagella

Direction of organism’s movement

Power stroke Recovery stroke

(b) Motion of cilia15 µm

Page 81: Chapter 6 Presentation

• Cilia and flagella share a common ultrastructure:

– A core of microtubules sheathed by the plasma membrane

– A basal body that anchors the cilium or flagellum

– A motor protein called dynein, which drives the bending movements of a cilium or flagellum

Animation: Cilia and FlagellaAnimation: Cilia and Flagella

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Page 82: Chapter 6 Presentation

Fig. 6-24

0.1 µm

Triplet

(c) Cross section of basal body

(a) Longitudinal section of cilium

0.5 µm

Plasma membrane

Basal body

Microtubules

(b) Cross section of cilium

Plasma membrane

Outer microtubule doublet

Dynein proteins

Central microtubuleRadial spoke

Protein cross-linking outer doublets

0.1 µm

Page 83: Chapter 6 Presentation

• How dynein “walking” moves flagella and cilia:

− Dynein arms alternately grab, move, and release the outer microtubules

– Protein cross-links limit sliding

– Forces exerted by dynein arms cause doublets to curve, bending the cilium or flagellum

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Page 84: Chapter 6 Presentation

Fig. 6-25Microtubuledoublets

Dyneinprotein

ATP

ATP

(a) Effect of unrestrained dynein movement

Cross-linking proteinsinside outer doublets

Anchoragein cell

(b) Effect of cross-linking proteins

1 3

2

(c) Wavelike motion

Page 85: Chapter 6 Presentation

Fig. 6-25a

Microtubule doublets

Dynein protein

(a) Effect of unrestrained dynein movement

ATP

Page 86: Chapter 6 Presentation

Fig. 6-25b

Cross-linking proteins inside outer doublets

Anchorage in cell

ATP

(b) Effect of cross-linking proteins

(c) Wavelike motion

1 3

2

Page 87: Chapter 6 Presentation

Microfilaments (Actin Filaments)

• Microfilaments are solid rods about 7 nm in diameter, built as a twisted double chain of actin subunits

• The structural role of microfilaments is to bear tension, resisting pulling forces within the cell

• They form a 3-D network called the cortex just inside the plasma membrane to help support the cell’s shape

• Bundles of microfilaments make up the core of microvilli of intestinal cells

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Page 88: Chapter 6 Presentation

Fig. 6-26

Microvillus

Plasma membrane

Microfilaments (actin filaments)

Intermediate filaments

0.25 µm

Page 89: Chapter 6 Presentation

• Microfilaments that function in cellular motility contain the protein myosin in addition to actin

• In muscle cells, thousands of actin filaments are arranged parallel to one another

• Thicker filaments composed of myosin interdigitate with the thinner actin fibers

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Page 90: Chapter 6 Presentation

Fig. 6-27

Muscle cell

Actin filament

Myosin filamentMyosin arm

(a) Myosin motors in muscle cell contraction

Cortex (outer cytoplasm):gel with actin network

Inner cytoplasm: solwith actin subunits

Extendingpseudopodium

(b) Amoeboid movement

Nonmoving corticalcytoplasm (gel)

Chloroplast

Streamingcytoplasm(sol) Vacuole

Cell wall

Parallel actinfilaments

(c) Cytoplasmic streaming in plant cells

Page 91: Chapter 6 Presentation

Fig, 6-27a

Muscle cell

Actin filament

Myosin filamentMyosin arm

(a) Myosin motors in muscle cell contraction

Page 92: Chapter 6 Presentation

Fig. 6-27bcCortex (outer cytoplasm): gel with actin network

Inner cytoplasm: sol with actin subunits

Extending pseudopodium

(b) Amoeboid movement

Nonmoving cortical cytoplasm (gel)

Chloroplast

Cell wall

Streaming cytoplasm (sol)

Parallel actin filaments

(c) Cytoplasmic streaming in plant cells

Vacuole

Page 93: Chapter 6 Presentation

• Localized contraction brought about by actin and myosin also drives amoeboid movement

• Pseudopodia (cellular extensions) extend and contract through the reversible assembly and contraction of actin subunits into microfilaments

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Page 94: Chapter 6 Presentation

• Cytoplasmic streaming is a circular flow of cytoplasm within cells

• This streaming speeds distribution of materials within the cell

• In plant cells, actin-myosin interactions and sol-gel transformations drive cytoplasmic streaming

Video: Cytoplasmic StreamingVideo: Cytoplasmic Streaming

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Page 95: Chapter 6 Presentation

Intermediate Filaments

• Intermediate filaments range in diameter from 8–12 nanometers, larger than microfilaments but smaller than microtubules

• They support cell shape and fix organelles in place

• Intermediate filaments are more permanent cytoskeleton fixtures than the other two classes

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Page 96: Chapter 6 Presentation

Concept 6.7: Extracellular components and connections between cells help coordinate cellular activities

• Most cells synthesize and secrete materials that are external to the plasma membrane

• These extracellular structures include:

– Cell walls of plants

– The extracellular matrix (ECM) of animal cells

– Intercellular junctions

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Page 97: Chapter 6 Presentation

Cell Walls of Plants

• The cell wall is an extracellular structure that distinguishes plant cells from animal cells

• Prokaryotes, fungi, and some protists also have cell walls

• The cell wall protects the plant cell, maintains its shape, and prevents excessive uptake of water

• Plant cell walls are made of cellulose fibers embedded in other polysaccharides and protein

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Page 98: Chapter 6 Presentation

• Plant cell walls may have multiple layers:

– Primary cell wall: relatively thin and flexible

– Middle lamella: thin layer between primary walls of adjacent cells

– Secondary cell wall (in some cells): added between the plasma membrane and the primary cell wall

• Plasmodesmata are channels between adjacent plant cells

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Page 99: Chapter 6 Presentation

Fig. 6-28

Secondary cell wall

Primary cell wall

Middle lamella

Central vacuoleCytosol

Plasma membrane

Plant cell walls

Plasmodesmata

1 µm

Page 100: Chapter 6 Presentation

Fig. 6-29

10 µm

Distribution of cellulose synthase over time

Distribution of microtubules over time

RESULTS

Page 101: Chapter 6 Presentation

The Extracellular Matrix (ECM) of Animal Cells

• Animal cells lack cell walls but are covered by an elaborate extracellular matrix (ECM)

• The ECM is made up of glycoproteins such as collagen, proteoglycans, and fibronectin

• ECM proteins bind to receptor proteins in the plasma membrane called integrins

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 102: Chapter 6 Presentation

Fig. 6-30

EXTRACELLULAR FLUIDCollagen

Fibronectin

Plasmamembrane

Micro-filaments

CYTOPLASM

Integrins

Proteoglycancomplex

Polysaccharidemolecule

Carbo-hydrates

Coreprotein

Proteoglycanmolecule

Proteoglycan complex

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Fig. 6-30a

Collagen

Fibronectin

Plasma membrane

Proteoglycan complex

Integrins

CYTOPLASMMicro-filaments

EXTRACELLULAR FLUID

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Fig. 6-30b

Polysaccharide molecule

Carbo-hydrates

Core protein

Proteoglycan molecule

Proteoglycan complex

Page 105: Chapter 6 Presentation

• Functions of the ECM:

– Support

– Adhesion

– Movement

– Regulation

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Page 106: Chapter 6 Presentation

Intercellular Junctions

• Neighboring cells in tissues, organs, or organ systems often adhere, interact, and communicate through direct physical contact

• Intercellular junctions facilitate this contact

• There are several types of intercellular junctions

– Plasmodesmata

– Tight junctions

– Desmosomes

– Gap junctionsCopyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 107: Chapter 6 Presentation

Plasmodesmata in Plant Cells

• Plasmodesmata are channels that perforate plant cell walls

• Through plasmodesmata, water and small solutes (and sometimes proteins and RNA) can pass from cell to cell

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Page 108: Chapter 6 Presentation

Fig. 6-31

Interior of cell

Interior of cell

0.5 µm Plasmodesmata Plasma membranes

Cell walls

Page 109: Chapter 6 Presentation

Tight Junctions, Desmosomes, and Gap Junctions in Animal Cells

• At tight junctions, membranes of neighboring cells are pressed together, preventing leakage of extracellular fluid

• Desmosomes (anchoring junctions) fasten cells together into strong sheets

• Gap junctions (communicating junctions) provide cytoplasmic channels between adjacent cells

Animation: Tight JunctionsAnimation: Tight Junctions

Animation: DesmosomesAnimation: Desmosomes

Animation: Gap JunctionsAnimation: Gap Junctions

Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

Page 110: Chapter 6 Presentation

Fig. 6-32

Tight junction

0.5 µm

1 µmDesmosome

Gap junction

Extracellularmatrix

0.1 µm

Plasma membranesof adjacent cells

Spacebetweencells

Gapjunctions

Desmosome

Intermediatefilaments

Tight junction

Tight junctions preventfluid from movingacross a layer of cells

Page 111: Chapter 6 Presentation

Fig. 6-32aTight junctions prevent fluid from moving across a layer of cells

Tight junction

Intermediate filaments

Desmosome

Gap junctions

Extracellular matrixSpace

between cells

Plasma membranes of adjacent cells

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Fig. 6-32b

Tight junction

0.5 µm

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Fig. 6-32c

Desmosome1 µm

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Fig. 6-32d

Gap junction

0.1 µm

Page 115: Chapter 6 Presentation

The Cell: A Living Unit Greater Than the Sum of Its Parts

• Cells rely on the integration of structures and organelles in order to function

• For example, a macrophage’s ability to destroy bacteria involves the whole cell, coordinating components such as the cytoskeleton, lysosomes, and plasma membrane

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Page 116: Chapter 6 Presentation

Fig. 6-33

5 µ

m

Page 117: Chapter 6 Presentation

Fig. 6-UN1Cell Component Structure Function

Houses chromosomes, made ofchromatin (DNA, the geneticmaterial, and proteins); containsnucleoli, where ribosomalsubunits are made. Poresregulate entry and exit ofmaterials.

Nucleus

(ER)

Concept 6.3 The eukaryotic cell’s geneticinstructions are housed inthe nucleus and carried outby the ribosomes

Ribosome

Concept 6.4 Endoplasmic reticulum The endomembrane systemregulates protein traffic andperforms metabolic functionsin the cell

(Nuclearenvelope)

Concept 6.5 Mitochondria and chloro-plasts change energy fromone form to another

Golgi apparatus

Lysosome

Vacuole

Mitochondrion

Chloroplast

Peroxisome

Two subunits made of ribo-somal RNA and proteins; can befree in cytosol or bound to ER

Extensive network ofmembrane-bound tubules andsacs; membrane separateslumen from cytosol;continuous withthe nuclear envelope.

Membranous sac of hydrolyticenzymes (in animal cells)

Large membrane-boundedvesicle in plants

Bounded by doublemembrane;inner membrane hasinfoldings (cristae)

Typically two membranesaround fluid stroma, whichcontains membranous thylakoidsstacked into grana (in plants)

Specialized metaboliccompartment bounded by asingle membrane

Protein synthesis

Smooth ER: synthesis oflipids, metabolism of carbohy-drates, Ca2+ storage, detoxifica-tion of drugs and poisons

Rough ER: Aids in synthesis ofsecretory and other proteins frombound ribosomes; addscarbohydrates to glycoproteins;produces new membrane

Modification of proteins, carbo-hydrates on proteins, and phos-pholipids; synthesis of manypolysaccharides; sorting of Golgiproducts, which are then released in vesicles.

Breakdown of ingested substances,cell macromolecules, and damagedorganelles for recycling

Digestion, storage, wastedisposal, water balance, cellgrowth, and protection

Cellular respiration

Photosynthesis

Contains enzymes that transferhydrogen to water, producinghydrogen peroxide (H2O2) as aby-product, which is convertedto water by other enzymesin the peroxisome

Stacks of flattenedmembranoussacs; has polarity(cis and transfaces)

Surrounded by nuclearenvelope (double membrane)perforated by nuclear pores.The nuclear envelope iscontinuous with theendoplasmic reticulum (ER).

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Fig. 6-UN1a

Cell Component Structure Function

Concept 6.3 The eukaryotic cell’s geneticinstructions are housed inthe nucleus and carried outby the ribosomes

Nucleus Surrounded by nuclearenvelope (double membrane)perforated by nuclear pores.The nuclear envelope iscontinuous with theendoplasmic reticulum (ER).

(ER)

Houses chromosomes, made ofchromatin (DNA, the geneticmaterial, and proteins); containsnucleoli, where ribosomalsubunits are made. Poresregulate entry and exit osmaterials.

Ribosome Two subunits made of ribo-somal RNA and proteins; can befree in cytosol or bound to ER

Protein synthesis

Page 119: Chapter 6 Presentation

Fig. 6-UN1b

Cell Component Structure Function

Concept 6.4 The endomembrane systemregulates protein traffic andperforms metabolic functionsin the cell

Endoplasmic reticulum

(Nuclearenvelope)

Golgi apparatus

Lysosome

Vacuole Large membrane-boundedvesicle in plants

Membranous sac of hydrolyticenzymes (in animal cells)

Stacks of flattenedmembranoussacs; has polarity(cis and transfaces)

Extensive network ofmembrane-bound tubules andsacs; membrane separateslumen from cytosol;continuous withthe nuclear envelope.

Smooth ER: synthesis oflipids, metabolism of carbohy-drates, Ca2+ storage, detoxifica-tion of drugs and poisons

Rough ER: Aids in sythesis ofsecretory and other proteinsfrom bound ribosomes; addscarbohydrates to glycoproteins;produces new membrane

Modification of proteins, carbo-hydrates on proteins, and phos-pholipids; synthesis of manypolysaccharides; sorting ofGolgi products, which are thenreleased in vesicles.

Breakdown of ingested sub-stances cell macromolecules, and damaged organelles for recycling

Digestion, storage, wastedisposal, water balance, cellgrowth, and protection

Page 120: Chapter 6 Presentation

Fig. 6-UN1c

Cell Component

Concept 6.5Mitochondria and chloro-plasts change energy fromone form to another

Mitochondrion

Chloroplast

Peroxisome

Structure Function

Bounded by doublemembrane;inner membrane hasinfoldings (cristae)

Typically two membranesaround fluid stroma, whichcontains membranous thylakoidsstacked into grana (in plants)

Specialized metaboliccompartment bounded by asingle membrane

Cellular respiration

Photosynthesis

Contains enzymes that transferhydrogen to water, producinghydrogen peroxide (H2O2) as aby-product, which is convertedto water by other enzymesin the peroxisome

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Fig. 6-UN2

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Fig. 6-UN3

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You should now be able to:

1. Distinguish between the following pairs of terms: magnification and resolution; prokaryotic and eukaryotic cell; free and bound ribosomes; smooth and rough ER

2. Describe the structure and function of the components of the endomembrane system

3. Briefly explain the role of mitochondria, chloroplasts, and peroxisomes

4. Describe the functions of the cytoskeleton

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Page 124: Chapter 6 Presentation

5. Compare the structure and functions of microtubules, microfilaments, and intermediate filaments

6. Explain how the ultrastructure of cilia and flagella relate to their functions

7. Describe the structure of a plant cell wall

8. Describe the structure and roles of the extracellular matrix in animal cells

9. Describe four different intercellular junctionsCopyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings