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NIWA - Dataversity
What is NIWA doing in the dataversity space?
NIWA - Dataversity
What is NIWA doing in the dataversity space?
How is NIWA doing what it's doing?
NIWA - Dataversity
What is NIWA doing in the dataversity space?
FBIS : Freshwater Biodiversity Information SystemFWFDB : Freshwater Fish DatabaseTRS : Taxa Reference ServiceEIB : Environmental Information BrowserCEMT : Community Environmental Monitoring ToolkitSPDBPub : Species Database Publishing ApplicationOS2020 Portal : BoI, IPY/CAML, Chat/ChallNZ Marine Biosecurity Porthole : as it says...
NIWA - Dataversity
FBIS : Freshwater Biodiversity Information System
Old, struggling to cope with current user requirements
New design, rebuild, integrate FWFDB
TFBIS/NIWA funded
NIWA - Dataversity
FWFDB : Freshwater Fish Database
Old, also can't meet current requirements
Effectively a subset of a full FBIS
Will be part of a wider spec'd new FBIS
NIWA - Dataversity
TRS : Taxa Reference Service
NIWA & public index & search tool for NZOR
NZOR?
Machine readable XML RESTful API
examples:
NIWA - Dataversity
TRS:
Web service to query taxa information
For use by applicationswhich requiretaxa information
NIWA - Dataversity
http://trs.niwa.co.nz/trs_rest/rest/taxa/search?name=Lipkius
<taxa:taxonList><taxa:list>
<taxa:id>31807</taxa:id><taxa:niwaId>100</taxa:niwaId><taxa:rankId>8</taxa:rankId><taxa:name>Lipkius</taxa:name><taxa:canonicalName>Lipkius</taxa:canonicalName><taxa:parentId>5045</taxa:parentId>
</taxa:list></taxa:taxonList>
NIWA - Dataversity
<taxa:taxonList><taxa:list>
<taxa:id>32309</taxa:id><taxa:niwaId>100</taxa:niwaId><taxa:rankId>8</taxa:rankId><taxa:name>Lipkius</taxa:name><taxa:canonicalName>Lipkius</taxa:canonicalName><taxa:parentId>5045</taxa:parentId>
</taxa:list><taxa:list>
<taxa:id>32310</taxa:id><taxa:niwaId>100</taxa:niwaId><taxa:rankId>24</taxa:rankId><taxa:name>Lipkius holthuisi Yaldwyn 1960</taxa:name><taxa:canonicalName>holthuisi</taxa:canonicalName><taxa:parentId>32309</taxa:parentId>
</taxa:list></taxa:taxonList>
http://trs.niwa.co.nz/trs_rest/rest/taxa/tree/name/Lipkius
NIWA - Dataversity
http://trs.niwa.co.nz/trs_rest/rest/taxa/fullname/name/Styela
Styelidae:Styela:Animalia:ROOT:Tunicata
NIWA - Dataversity
EIB : Environmental Information Browser
Very early days.
General tool for map/text search
Open Source tools
OGC web service standards
NIWA - Dataversity
CEMT : Community Environmental Monitoring Toolkit
Early stages of development
Crowd sourcing tool: individual & group mgmt
Initial specific local purpose
Generic design
NIWA - Dataversity
SPDBPub : Species Database Publishing Application
Planning stages: toolset selection & db design
To manage taxa related non-NZOR content(text, photographs, attribute data)
To provide by-taxa templated publication quality output for ID guides
TFBIS funded for updated FW pests guide
NIWA - Dataversity
OS2020 Portal : BoI, IPY/CAML, Chat/Chall
Initial public release Oct 2010
Provide access to data from OS2020 BoI survey
Metadata catalogue / web map interface
Provide reports, data, images
NIWA - Dataversity
OS2020 Portal : BoI, IPY/CAML, Chat/Chall
BoI: Essentially data, minimal analysis
IPY/CAML: metadata requirementOBIS requirement
Chat/Chall: biodiversity analysisrequirement
NIWA - Dataversity
Includes20,000 seabed photographs via public search & map interface
NIWA - Dataversity
Analysis results:
Measures of biodiversity by site using various methods
NIWA - Dataversity
Data: species distribution
Analysis results:
Modelled/Predicted species distribution based on habitat classification
NIWA - Dataversity
NZ Marine Biosecurity Porthole
Re-use OS2020 tools to provide access to marine biosecurity data and reports
Search for & download reports
View species distributions
NIWA - Dataversity
Access to 4 distinctbiosecurity datasets pluaall 4 combined
NIWA - Dataversity
Species selection & distribution for all datasets, includes point locations and bioregionsfrom litereature review.
Also shows ports sampled
NIWA - Dataversity
How is NIWA doing what it is doing?
As a CRI, NIWA is required to make a return on assets,
but also to support an “NZ Inc/public good” approach
WRT to OS2020:
Open standards; open source; open data
NIWA - Dataversity
Open standards; open source; open data
Open standards provide interoperability(map layers embedded in other apps)
Open source provides reuseability(biosecurity portal from OS2020 one)
Open data provides ...