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Using a PICO Method to Organize Medical Evidence: A Case Study involving Medical Students and The Cochrane Library Dympna O’Sullivan, Szymon Wilk, Wojtek Michalowski, Ken Farion “The conscientious, explicit and judicious use of current best evidence in making decisions about the care of individual patients” 1 Advocates that clinicians pay attention to findings from health care research that are valid and ready for clinical practice Modern medicine is characterized by an “explosion” in clinical research information making practical application of EBM problematic Multiple repositories MDs lack knowledge on how to construct effective queries Difficulty tracking down evidence quickly during a consultation Present a PICO method for organizing medical evidence so that it may be automatically accessed and evaluated by MDs during a clinical encounter Student’s Experience of EBM 9/11 had studied EBM as part of their medical degree program. 8/11 use search engines or repositories of medical literature UpToDate® is the most popular repository (only used by Canadian MDs) PubMed and Google are the next most popular engines 3/11 know how to construct complex queries using operators and qualifiers Quality of Mapping and Evidence Retrieval 10/11 agreed that mappings to PICO representation were accurate 9/11 stated that retrieved evidence was relevant for encounter descriptions 10/11 stated that retrieved evidence was relevant for PICO descriptions Usability of the PICO Method for Evidence Retrieval All stated framework would enable better retrieval of evidence during clinical consultations All agreed evidence retrieved would be relevant to clinical tasks and learning 10/11 stated PICO method would save time searching for evidence All thought that presentation of evidence was logical and intuitive During a consultation an MD will review pertinent patient data (signs and symptoms), form a diagnosis and decide upon a course of treatment(s) to apply. PICO method for evidence retrieval 3 PICO elements (patient-, diagnosis-, and treatment-related attributes) are identified in Cochrane Library Systematic Reviews using text mining techniques Elements are expanded using UMLS Metathesaurus 4 and fine- grained PICO elements are applied as index terms to Systematic Reviews using MetaMap 5 Clinical queries are automatically formulated from data gathered during the clinical encounter and converted to PICO elements (patient-, diagnosis-, and treatment-related attributes) Queries executed on PICO-based indices to retrieve and present evidence ranked according to similarity to PICO elements 1. Sackett DL, Rosenberg WM, Gray JA, Haynes RB, and Richardson WS. Evidence based medicine: what it is and what it isn't. BMJ 1996: 312 (7023): 712. 2. Sackett DL, Strauss SE, Richardson WS, Rosenberg W, and Haynes RB. Evidence- based medicine: how to practice and teach EBM. London: Churchill-Livingstone, 2000 3. O'Sullivan D, Wilk S, Michalowski W, and Farion K. Automatic Indexing and Retrieval of Encounter-specific Evidence for Point-of-Care Support, J Biomed Inform 2010: 43(4): 623-631. 4. U.S. National Library of Medicine, Unified Medical Language System (UMLS) http://www.nlm.nih.gov/research/umls/knowledge_sources/metathesaurus/ 5. U.S. National Library of Medicine, MetaMap Portal , http://metamap.nlm.nih.gov/ Student MDs are enthusiastic to apply EBM however many existing tools do not effectively support them: Most popular programs are generic search tools not explicitly designed for EBM tasks (e.g. Google and Wikipedia) No help is provided to formulate queries focused on current clinical task Retrieved evidence is usually organized according to metrics such as keyword frequencies rather than pertinent aspects of clinical encounters or established markers from EBM (e.g. the PICO elements) Novice users are challenged to evaluate evidence quickly and effectively and find it difficult to apply findings during clinical encounters Our PICO-based method for evidence retrieval helps: Better organize evidence to emphasize pertinent aspects of a clinical encounter and thus retrieve evidence that is aligned with student MD’s decision making models Automatically and implicitly integrates complex functionally so that student MDs can readily practice EBM and not be disadvantaged by lack of specialist knowledge or skills Sackett et al 2 proposed that a good clinical question should involve the following components: Patient/Population - Who or What? Intervention - How? Comparison - What is the main alternative? (If appropriate) Outcome - What are you trying to accomplish, measure, improve, effect? A good clinical question will: Save time when searching Keep the focus directly on the patient's need EVIDENCE BASED MEDICINE (EBM) FORMULATING CLINICAL QUESTIONS PICO METHOD FOR RETRIEVING EVIDENCE AT THE POINT-OF-CARE RESULTS CONCLUSIONS BIBLIOGRAPHY EVALUATING THE PICO METHOD FOR EVIDENCE RETRIEVAL Elicited student MDs attitudes towards PICO method for organizing evidence 11 students (5 from Ireland, 6 from Canada), majority in final year of study, evaluated PICO method and completed questionnaire Developed a web application to test the PICO method and which presented: Pre-defined clinical encounters represented as vignettes Patient-, diagnostic-, and treatment- related attributes extracted from Cochrane Systematic Reviews using text mining techniques Extracted patient-, diagnostic-, and treatment- related attributes and translated to PICO representation Automatically constructed queries built from PICO elements captured during consultation Systematic Reviews ranked according to similarity to PICO elements PICO

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Page 1: Using a PICO Method to Organize Medical Evidence: A Case ... · EBM (e.g. the PICO elements) • Novice users are challenged to evaluate evidence quickly and effectively and find

Using a PICO Method to Organize Medical Evidence:

A Case Study involving Medical Students and The Cochrane Library Dympna O’Sullivan, Szymon Wilk, Wojtek Michalowski, Ken Farion

• “The conscientious, explicit and judicious use of

current best evidence in making decisions about

the care of individual patients”1

• Advocates that clinicians pay attention to findings

from health care research that are valid and ready

for clinical practice

• Modern medicine is characterized by an

“explosion” in clinical research information

making practical application of EBM problematic

• Multiple repositories

• MDs lack knowledge on how to construct

effective queries

• Difficulty tracking down evidence quickly

during a consultation

• Present a PICO method for organizing medical

evidence so that it may be automatically accessed

and evaluated by MDs during a clinical encounter

Student’s Experience of EBM

•9/11 had studied EBM as part of their medical

degree program.

•8/11 use search engines or repositories of medical

literature

•UpToDate® is the most popular repository (only

used by Canadian MDs)

•PubMed and Google are the next most popular

engines

•3/11 know how to construct complex queries

using operators and qualifiers

Quality of Mapping and Evidence Retrieval

•10/11 agreed that mappings to PICO

representation were accurate

•9/11 stated that retrieved evidence was relevant

for encounter descriptions

•10/11 stated that retrieved evidence was relevant

for PICO descriptions

Usability of the PICO Method for Evidence

Retrieval

•All stated framework would enable better retrieval

of evidence during clinical consultations

•All agreed evidence retrieved would be relevant to

clinical tasks and learning

•10/11 stated PICO method would save time

searching for evidence

•All thought that presentation of evidence was

logical and intuitive

• During a consultation an MD will review pertinent patient data (signs

and symptoms), form a diagnosis and decide upon a course of

treatment(s) to apply.

• PICO method for evidence retrieval3

• PICO elements (patient-, diagnosis-, and treatment-related

attributes) are identified in Cochrane Library Systematic Reviews

using text mining techniques

• Elements are expanded using UMLS Metathesaurus4 and fine-

grained PICO elements are applied as index terms to Systematic

Reviews using MetaMap5

• Clinical queries are automatically formulated from data gathered

during the clinical encounter and converted to PICO elements

(patient-, diagnosis-, and treatment-related attributes)

• Queries executed on PICO-based indices to retrieve and present

evidence ranked according to similarity to PICO elements

1. Sackett DL, Rosenberg WM, Gray JA, Haynes RB, and Richardson WS. Evidence

based medicine: what it is and what it isn't. BMJ 1996: 312 (7023): 71–2.

2. Sackett DL, Strauss SE, Richardson WS, Rosenberg W, and Haynes RB. Evidence-

based medicine: how to practice and teach EBM. London: Churchill-Livingstone,

2000

3. O'Sullivan D, Wilk S, Michalowski W, and Farion K. Automatic Indexing and

Retrieval of Encounter-specific Evidence for Point-of-Care Support, J Biomed

Inform 2010: 43(4): 623-631.

4. U.S. National Library of Medicine, Unified Medical Language System (UMLS)

http://www.nlm.nih.gov/research/umls/knowledge_sources/metathesaurus/

5. U.S. National Library of Medicine, MetaMap Portal , http://metamap.nlm.nih.gov/

• Student MDs are enthusiastic to apply EBM

however many existing tools do not effectively

support them:

• Most popular programs are generic search

tools not explicitly designed for EBM tasks

(e.g. Google and Wikipedia)

• No help is provided to formulate queries

focused on current clinical task

• Retrieved evidence is usually organized

according to metrics such as keyword

frequencies rather than pertinent aspects of

clinical encounters or established markers from

EBM (e.g. the PICO elements)

• Novice users are challenged to evaluate

evidence quickly and effectively and find it

difficult to apply findings during clinical

encounters

• Our PICO-based method for evidence retrieval

helps:

• Better organize evidence to emphasize

pertinent aspects of a clinical encounter and

thus retrieve evidence that is aligned with

student MD’s decision making models

• Automatically and implicitly integrates

complex functionally so that student MDs can

readily practice EBM and not be

disadvantaged by lack of specialist knowledge

or skills

• Sackett et al2 proposed that a good clinical

question should involve the following

components:

• Patient/Population - Who or What?

• Intervention - How?

• Comparison - What is the main alternative?

(If appropriate)

• Outcome - What are you trying to accomplish,

measure, improve, effect?

• A good clinical question will:

• Save time when searching

• Keep the focus directly on the patient's need

EVIDENCE BASED MEDICINE

(EBM)

FORMULATING CLINICAL

QUESTIONS

PICO METHOD FOR RETRIEVING EVIDENCE AT

THE POINT-OF-CARE

RESULTS

CONCLUSIONS

BIBLIOGRAPHY

EVALUATING THE PICO METHOD FOR

EVIDENCE RETRIEVAL

• Elicited student MDs attitudes towards PICO method for organizing

evidence

• 11 students (5 from Ireland, 6 from Canada), majority in final year

of study, evaluated PICO method and completed questionnaire

• Developed a web application to test the PICO method and which

presented:

• Pre-defined clinical encounters represented as vignettes

• Patient-, diagnostic-, and treatment- related attributes extracted

from Cochrane Systematic Reviews using text mining techniques

• Extracted patient-, diagnostic-, and treatment- related attributes and

translated to PICO representation

• Automatically constructed queries built from PICO elements

captured during consultation

• Systematic Reviews ranked according to similarity to PICO

elements

PICO