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US Stripe Rust in 2006 Xianming Chen April 2, 2007 ARS, Wheat Genetics, Quality, Physiology, and Dis Research Unit tment of Plant Pathology, Washington State Univers

US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

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Page 1: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

US Stripe Rust in 2006 US Stripe Rust in 2006

Xianming Chen

April 2, 2007

USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology, Washington State University

Page 2: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

Wheat Stripe Rust(Puccinia striiformis f. sp. tritici)

Page 3: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

Barley Stripe Rust(Puccinia striiformis f. sp. hordei)

Page 4: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

Wheat Stripe Rust Epidemic in the US in 2005Wheat Stripe Rust Epidemic in the US in 2005

Places fromwhich striperust werecollected.

Stripe rustoccurredwithin theregion.

Page 5: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

1.515.0

Wheat Yield Losses Caused by Stripe Rust in 2005 (in percentage and million bushels)

2.722.62.46

4.43.242.3

0.445.0

0.531.0

0.071.0

33.788.0

0.040.2

0.265.00.03

1.0

0.602.0

2.894.0

6.815.0

0.040.5

17.8215.2

0.061.0

US Total3.36%73.28 mHttp://www.crl.umn.edu

Page 6: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

First Observations of Stripe Rust in Various States in 2006

4/26

3/7 3/20

Colusa3/16

St. Paul

College Station

Baton Rouge

4/23

Plains

Walla2 4/20

Corvallis4/11

Sturtgart4/17

5/13Limestone

Painter5/16

Urbana5/8

Kalispell5/23

Hertford5/17

Weston5/28

Pullman5/31

Clarksville6/1

Pleurina6/5

Wenetah6/9

6/14Fargo

Logan3/16

Yuma3/20

Page 7: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

WA

OR ID

MT

NV

WY

UT

AZ NM

OK

KS

SD WI

IA

MO

AR

LA

IL IN

MI

OH

KY

TN

MS AL GA

SC

VA

NC

WV

PA

NY

MDDE

NJ

ME

NHVT

MACT

NC

ND

MN

TX

NE

CO

2000

WA

OR

CA

ID

MT

NV

WY

UT

AZ NM

OK

KS

SD WI

IA

MO

AR

LA

IL IN

MI

OH

KY

TN

MS AL GA

FL

SC

VA

NC

WV

PA

NY

MDDE

NJ

ME

NHVT

MACT

NC

ND

MN

TX

NE

CO

2001FL

WA

OR

CA

ID

MT

NV

WY

UT

AZ NM

OK

KS

SD WI

IA

MO

AR

LA

IL IN

MI

OH

KY

TN

MS AL GA

FL

SC

VA

NC

WV

PA

NY

MDDE

NJ

ME

NHVT

MACT

NC

ND

MN

TX

NE

CO

2002

Barley Stripe Rust

1991

19921992

1992

1993

1993

1993

19941994

1995

1995 Spread in 1991-1995 Distributions

in 2000-06

WA

OR ID

MT

NV

WY

UT

AZ NM

OK

KS

SD WI

IA

MO

AR

LA

IL IN

MI

OH

KY

TN

MS AL GA

SC

VA

NC

WV

PA

NY

MDDE

NJ

ME

NHVT

MACT

NC

ND

MN

TX

NE

CO

2003 - 2006

Trace –20%

Severe (>20%)

Page 8: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

Yield Losses Caused by Stripe Rust in the US in 2006

State Percent BushelsArkansas 1.0 189,800California 15.0 2,529,100

Idaho 0.3 164,5003.0 199,000

0.5 172,400Louisiana 2.0 114,700Montana 0.6 498,400

0.1 63,900Oregon 0.2 77,500

0.5 28,900Washington 0.2 238,100

0.5 106,800

CropWinter wheatWinter wheat

Winter wheatDurum wheat

Spring wheatWinter wheatWinter wheatSpring wheatWinter wheatSpring wheatWinter wheatSpring wheat

US Total 0.24 4,383,100All wheat0.05 93,800Barley

http://www.cdl.umn.edu/index.htm

Page 9: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

Barley differentialsNo. Cultivar123456789

1011

TopperHeils FrankenEmirAstrixHiprolyVarundaAbed Binder 12TrumpfMazurkaBigoI 5

12 Bancroft

Barley Stripe Rust Races in 2006

Race Virulence US CA WA OR AZPSH Frequency (%)

1 1,2 2.3 6.336 1,4 2.348 1

56 1,5,7,8,12 4.760 1,5,7,8,9,10,12 7.0 6.3

77 1,3,5,7,8,9,10,12 2.3

71 1,3,5,6,7,8,9,10,12 25.6 30.072 1,2,3,4,5,6,7,8,9,10,11,12 2.375 1,2,3,4,5,6,7,8,9,10,12 27.9 20.0

78 1,2,4,5,6,7,8,12 2.3 8.312.5

52 1,5,7,84.72.3

63 1,3,5,7,8,12 2.3

76 1,5,6,7,8,9,10,12 7.0

79 1,2,4,5,7,8,9,10,12 2.3 10.080 1,5,7,10 2.3 6.3

MN

6.312.5

6.320.010.0 25.010.0

31.3 75.0

83.318.8

6.3

81 1,7,10 2.3 100

Page 10: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

Races of Puccinia striiformis f. sp. hordeiin Various States in 2006

StateNo. ofIsolate

No. ofRaces PSH Race (and No. of Isolates)

Arizona 12 3 72 (1), 75 (10), 78 (1)California 16 9 36 (1), 48 (2), 52 (1), 60 (1),

71 (5), 76 (3), 77 (1), 80 (1)Oregon 4 2 60 (1), 71 (3)Washington 10 7 56 (2), 60 (1), 63 (1), 71 (1)

75 (2), 76 (3), 79 (1)Minnesota 1 1 81 (1)*

Total 43 16

* This isolate from barley also was identified as PST-123 .

Page 11: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

Wheat Stripe Rust Races Identified in 2006

racePST

VirulencesNo. of

samples from

25 1,3,6,8,9,10,12 3 WA35 1,10 5 WA78 1,3,11,12,16,17,18,19,20 1 WA80 1,3,8,11,12,16,17,18,19,20 1 GA98 1,3,8,10,11,12,16,17,18,19,20 2 LA,TX

100 1,3,8,9,10,11,12,16,17,18,19,20 42 16 states101 1,2,3,8,9,10,11,12,16,17,18,19,20 24 CA (23), WA (1)102 1,3,8,9,10,11,12,14,16,17,18,19,20 17 11 states111 1,3,5,8,9,10,11,12,16,17,18,19,20 5 OR, ID, WA

Collected Wheat Differentials

No Name

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

Yr5

Lemhi

Chinese 166

Heines VII

Moro

Paha

Druchamp

Produra

Yamhill

Stephens

Lee

Fielder

Tyee

Tres

Hyak

17 Yr8

18 Yr9

19 Clement

20 Compair

16 Express

No Name

for PST races

114 1,3,4,8,9,10,11,12,14,16,17,18,19,20 29 OR, ID, WA, UT115 1,3,5,8,9,10,11,12,16,17,18,19,20 7 OR, ID, WA116 1,3,4,5,8,9,10,11,12,16,17,18,19,20 1 WA117 1,3,6,8,9,10,11,12,14,16,17,18,19,20 1 OR, WA122 1,2,3,6,8,9,10,11,12,14,16,17,18,19,20 1 CA123 1,3,6,8,9,10,11,12,16,17,18,19,20 2 CA, MN124 1,2,3,12 1 CA125 1,2,8,12 1 CA126 1,2,8,10,12,16 1 CA

Page 12: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

No. of No. of State isolates races PST race (and frequncy, %)CA 28 4 100 (7.1), 101 (82.1), 102 (7.1), 122 (3.6)OR 14 6 100 (21.4), 102 (21.4), 111 (7.1), 114 (28.6), 115 (7.1), 117 (14.3)

WA 52 1125 (5.8), 35 (9.6), 78 (1.9), 100 (13.5),101 (3.8),102 (1.9),111 (5.8), 114 (38.5), 115 (7.7), 116 (1.9), 117 (9.6)

ID 10 4 100 (30.0), 111 (10.0), 114 (40.0), 115 (20)UT 5 2 100 (80.0), 114 (20.0)MT 3 2 100 (33.3), 102 (66.7)AL 1 1 100AR 1 1 102GA 11 3 80 (9.1), 100 (72.7), 102 (18.2)IL 1 1 100 (1)IN 3 2 100 (33.3), 102 (66.7)LA 4 3 98 (25.0), 100 (50.0), 102 (25.0)MD 2 2 100 (50.0), 102 (50.0)MN 4 3 100 (50.0), 102 (25.0), 123 (25.0)MO 1 1 102NC 1 1 100TX 1 1 98VA 5 1 100 (100.0)Total 147 18

PST Races and Their Frequencies in Various States in 2006

Page 13: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

Total no. of races

US WA

18 11No. of samples 147 52

No. of new races 5 (3.5) 0 (0)Races in old group 2 (5.6) 2 (15.4)Races in new group 16 (94.4) 9 (84.6)

No. of previous races 13 (96.5) 11 (21.2)

PST-100 (29.4) (13.5)PST-114 (20.3) (38.5)PST-101 (16.8) (3.8)

Race Identification of Wheat Stripe Rust in 2006

Predominant races

Number (frequency, %)

PST-102 (11.9) (1.9)PST-115 (4.9) (7.7)PST-111 (3.5) (5.8)

Page 14: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

Summary of Races of Puccinia striiformis f. sp. tritici in the US from 2000 to 2006

2000 2001 2002 2003 2004 2005 2006

No. of isolates

No. of races

No. of new races

143

18

5

486

27

6

293

28

6

420

31

10

414

39

9

34

10

184156

42

21

Prevalent races

1st

2nd

3rd

4th

5th

100 (29%)

101 (17%)

114 (20%)

102 (12%)

115 (5%)

100 (33%)

102 (27%)

115 (14%)

114 (3.2%)

116 (3%)

100 (50%)

102 (17%)

101 (4%)

92 (3%)

110 (3%)

100 (33%)

98 (29%)

97 (11%)

78 (6%)

80 (5%)

78 (31%)

97 (11%)

98 (10%)

80 (9%)

20 (5%)

78 (23%)

80 (17%)

67 (8%)

71 (5%)

64 (4%)

80 (12%)

20 (11%)

59 (11%)

58 (11%)

78 (8%)

Page 15: US Stripe Rust in 2006 Xianming Chen April 2, 2007 USDA-ARS, Wheat Genetics, Quality, Physiology, and Disease Research Unit Department of Plant Pathology,

AcknowledgementsAcknowledgementsK. Burch

C. Cowger

J. Costa

S. Harrison

D. Hole

L Jackson

Y. Jin

M. Johnston

M. Kolding

L. Kolb

D. Long

R. McIntosh

S. Markell

L. Penman

K. Richardson

D. Santra

B. Steffenson

A. Steve

M. Wang

J. Windes

D. Wood

J. YoumansM. Carson

C. Griffey

R. Harrington