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Par-4 Transcriptionally Regulates Bcl-2 through a WT1-binding Site on the bcl-2 Promoter* Received for publication, June 12, 2002, and in revised form, March 14, 2003 Published, JBC Papers in Press, March 17, 2003, DOI 10.1074/jbc.M205865200 Sangeeta K. Cheema‡, Sandip K. Mishra§, Vivek M. Rangnekar, Ana M. Tari‡, Rakesh Kumar§, and Gabriel Lopez-Berestein‡ From the Department of Bioimmunotherapy, Section of Immunobiology and Drug Carrier and the §Department of Molecular and Cellular Oncology, University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030 and the Department of Radiation Medicine, the University of Kentucky, Lexington, Kentucky 40536 Elevated expression levels of the bcl-2 proto-oncogene have been extensively correlated with the appearance of androgen independence in prostate cancer. Although bcl-2 was first cloned as the t(14:18) translocation break- point from human follicular B cell lymphoma, the mech- anism of overexpression of bcl-2 is largely undefined for advanced prostate cancer because there are no gross alterations in the gene structure. We investigated the role of the product of the prostate apoptosis response gene-4 (Par-4) and the product of the Wilms’ tumor 1 gene (WT1) in the regulation of Bcl-2 expression in pros- tate cancer cell lines. We observed growth arrest and apoptosis, upon decreasing Bcl-2 protein and transcript in the high Bcl-2-expressing, androgen-independent prostate cancer cell line, by all-trans-retinoic acid treat- ment (ATRA), but this did not occur in the androgen-de- pendent cell line expressing low levels of Bcl-2. The decrease in the Bcl-2 protein and transcript following all-trans-retinoic acid treatment was accompanied by changes in localization of Par-4 and an induction in the expression of WT1 protein. In stable clones expressing ectopic Par-4 and in ATRA-treated cells, we observed decreased Bcl-2 protein and transcript. This was accom- panied by an induction in WT1 expression. The involve- ment of WT1 in the Par-4-mediated down-modulation of Bcl-2 was further defined by blocking endogenous WT1 expression, which resulted in an increase in Bcl-2 ex- pression. Finally, we detected Par-4 and WT1 proteins binding to a previously identified WT1-binding site on the bcl-2 promoter both in vitro and in vivo leading to a decrease in transcription from the bcl-2 promoter. We conclude that Par-4 regulates Bcl-2 through a WT1-bind- ing site on the bcl-2 promoter. These data also identify Par-4 nuclear localization as a novel mechanism for ATRA-mediated bcl-2 regulation. Overexpression of Bcl-2 in prostate cancer is a hallmark of advanced hormone-refractory disease and may account for the resistance to apoptosis that is characteristic of the late stages (1, 2). This correlation is strengthened by in vitro studies that demonstrate an increased Bcl-2 expression upon androgen withdrawal in androgen-sensitive prostate cancer cells (3–5). Previously, we have shown that high Bcl-2 expression in an- drogen-independent prostate cancer cells is associated with cytoplasmic sequestration of the p53 protein, thereby impair- ing the nuclear transport of p53 in response to an apoptotic signal (6). Overexpression of Bcl-2 also correlates with poor prognosis for patients undergoing radical prostatectomy or hor- monal ablation. In addition, high levels of Bcl-2 confer resist- ance to chemotherapy in prostate cancer cell lines, and current clinical efforts are aimed at modulating the expression of Bcl-2 (3). Furthermore, in vivo studies have demonstrated that in- creased expression of Bcl-2 accelerates the appearance of the androgen-independent phenotype in prostate cancer and that decreasing Bcl-2 expression delays progression to androgen independence along with enhancing chemosensitivity of these tumors (7–9). The bcl-2 gene is a key determinant of neoplastic cell expan- sion whose oncogenic activity has been ascribed primarily to its ability to promote cell survival (10). It was first cloned as the t(14:18) translocation breakpoint from follicular lymphoma (11, 12). This translocation results in the juxtaposition of the bcl-2 gene in front of the immunoglobulin heavy-chain enhancer that leads to aberrant expression. In addition to lymphomas with t(14:18) translocations, high levels of Bcl-2 protein, aberrant patterns of Bcl-2 protein production, or both have been ob- served in a variety of solid tumors (13, 14). However, in con- trast to lymphomas, no evidence for gross alterations in the bcl-2 gene structure has been obtained for these other types of cancer, suggesting that expression is controlled through tran- scription initiation at the bcl-2 promoter (15). Two promoter regions have been identified in the 5-regulatory region of the bcl-2 gene. P1, the predominant promoter in B cells, is a TATA- less, GC-rich region containing multiple initiation sites (16 – 18). The second promoter, P2, is located 1.3 kb downstream of P1, contains a CCAAT box, an octamer motif, and a TATA element. This promoter is active in neuronal cells and some pre-B cells (18, 19). bcl-2 promoter usage in prostate cancer cells and the identity of transcription factors that regulate its expression in these cells remain uncharacterized. Recently, nuclear factor-B has been identified to bind to the bcl-2 P2 promoter via B sites and activate its transcription in prostate cancer cells in response to tumor necrosis factor- treatment (20). However, the mechanisms of Bcl-2 overexpression in an- drogen-independent prostate cancer are undefined. The product of the prostate apoptosis response gene-4 (Par- 4), although not a classical transcription factor, is co-expressed along with Bcl-2 in the normal prostate basal epithelia (23). Following differentiation of these cells to luminal/secretory epithelia, Par-4 expression is decreased and mainly restricted to the nucleus, and Bcl-2 expression is lost (23). Previously, ectopic expression of Par-4 led to the down-modulation of Bcl-2 * The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement” in accordance with 18 U.S.C. Section 1734 solely to indicate this fact. To whom correspondence should be addressed: Dept. of Bioimmu- notherapy, Box 422, the University of Texas M. D. Anderson Cancer Center, 1515 Holcombe Blvd., Houston, TX 77030. Tel.: 713-792-8140; Fax: 713-796-1731; E-mail: [email protected]. THE JOURNAL OF BIOLOGICAL CHEMISTRY Vol. 278, No. 22, Issue of May 30, pp. 19995–20005, 2003 © 2003 by The American Society for Biochemistry and Molecular Biology, Inc. Printed in U.S.A. This paper is available on line at http://www.jbc.org 19995 by guest on December 5, 2020 http://www.jbc.org/ Downloaded from

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Page 1: THE J BIOLOGICAL C © 2003 by The American Society for ... · the product of the Wilms’ tumor gene (WT1),1 the atypical protein kinase C- , and the death-activated protein-like

Par-4 Transcriptionally Regulates Bcl-2 through a WT1-binding Siteon the bcl-2 Promoter*

Received for publication, June 12, 2002, and in revised form, March 14, 2003Published, JBC Papers in Press, March 17, 2003, DOI 10.1074/jbc.M205865200

Sangeeta K. Cheema‡, Sandip K. Mishra§, Vivek M. Rangnekar¶, Ana M. Tari‡, Rakesh Kumar§,and Gabriel Lopez-Berestein‡�

From the ‡Department of Bioimmunotherapy, Section of Immunobiology and Drug Carrier and the §Department ofMolecular and Cellular Oncology, University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030 and the¶Department of Radiation Medicine, the University of Kentucky, Lexington, Kentucky 40536

Elevated expression levels of the bcl-2 proto-oncogenehave been extensively correlated with the appearance ofandrogen independence in prostate cancer. Althoughbcl-2 was first cloned as the t(14:18) translocation break-point from human follicular B cell lymphoma, the mech-anism of overexpression of bcl-2 is largely undefined foradvanced prostate cancer because there are no grossalterations in the gene structure. We investigated therole of the product of the prostate apoptosis responsegene-4 (Par-4) and the product of the Wilms’ tumor 1gene (WT1) in the regulation of Bcl-2 expression in pros-tate cancer cell lines. We observed growth arrest andapoptosis, upon decreasing Bcl-2 protein and transcriptin the high Bcl-2-expressing, androgen-independentprostate cancer cell line, by all-trans-retinoic acid treat-ment (ATRA), but this did not occur in the androgen-de-pendent cell line expressing low levels of Bcl-2. Thedecrease in the Bcl-2 protein and transcript followingall-trans-retinoic acid treatment was accompanied bychanges in localization of Par-4 and an induction in theexpression of WT1 protein. In stable clones expressingectopic Par-4 and in ATRA-treated cells, we observeddecreased Bcl-2 protein and transcript. This was accom-panied by an induction in WT1 expression. The involve-ment of WT1 in the Par-4-mediated down-modulation ofBcl-2 was further defined by blocking endogenous WT1expression, which resulted in an increase in Bcl-2 ex-pression. Finally, we detected Par-4 and WT1 proteinsbinding to a previously identified WT1-binding site onthe bcl-2 promoter both in vitro and in vivo leading to adecrease in transcription from the bcl-2 promoter. Weconclude that Par-4 regulates Bcl-2 through a WT1-bind-ing site on the bcl-2 promoter. These data also identifyPar-4 nuclear localization as a novel mechanism forATRA-mediated bcl-2 regulation.

Overexpression of Bcl-2 in prostate cancer is a hallmark ofadvanced hormone-refractory disease and may account for theresistance to apoptosis that is characteristic of the late stages(1, 2). This correlation is strengthened by in vitro studies thatdemonstrate an increased Bcl-2 expression upon androgenwithdrawal in androgen-sensitive prostate cancer cells (3–5).

Previously, we have shown that high Bcl-2 expression in an-drogen-independent prostate cancer cells is associated withcytoplasmic sequestration of the p53 protein, thereby impair-ing the nuclear transport of p53 in response to an apoptoticsignal (6). Overexpression of Bcl-2 also correlates with poorprognosis for patients undergoing radical prostatectomy or hor-monal ablation. In addition, high levels of Bcl-2 confer resist-ance to chemotherapy in prostate cancer cell lines, and currentclinical efforts are aimed at modulating the expression of Bcl-2(3). Furthermore, in vivo studies have demonstrated that in-creased expression of Bcl-2 accelerates the appearance of theandrogen-independent phenotype in prostate cancer and thatdecreasing Bcl-2 expression delays progression to androgenindependence along with enhancing chemosensitivity of thesetumors (7–9).

The bcl-2 gene is a key determinant of neoplastic cell expan-sion whose oncogenic activity has been ascribed primarily to itsability to promote cell survival (10). It was first cloned as thet(14:18) translocation breakpoint from follicular lymphoma (11,12). This translocation results in the juxtaposition of the bcl-2gene in front of the immunoglobulin heavy-chain enhancer thatleads to aberrant expression. In addition to lymphomas witht(14:18) translocations, high levels of Bcl-2 protein, aberrantpatterns of Bcl-2 protein production, or both have been ob-served in a variety of solid tumors (13, 14). However, in con-trast to lymphomas, no evidence for gross alterations in thebcl-2 gene structure has been obtained for these other types ofcancer, suggesting that expression is controlled through tran-scription initiation at the bcl-2 promoter (15). Two promoterregions have been identified in the 5�-regulatory region of thebcl-2 gene. P1, the predominant promoter in B cells, is a TATA-less, GC-rich region containing multiple initiation sites (16–18). The second promoter, P2, is located 1.3 kb downstream ofP1, contains a CCAAT box, an octamer motif, and a TATAelement. This promoter is active in neuronal cells and somepre-B cells (18, 19). bcl-2 promoter usage in prostate cancercells and the identity of transcription factors that regulate itsexpression in these cells remain uncharacterized. Recently,nuclear factor-�B has been identified to bind to the bcl-2 P2promoter via �B sites and activate its transcription in prostatecancer cells in response to tumor necrosis factor-� treatment(20). However, the mechanisms of Bcl-2 overexpression in an-drogen-independent prostate cancer are undefined.

The product of the prostate apoptosis response gene-4 (Par-4), although not a classical transcription factor, is co-expressedalong with Bcl-2 in the normal prostate basal epithelia (23).Following differentiation of these cells to luminal/secretoryepithelia, Par-4 expression is decreased and mainly restrictedto the nucleus, and Bcl-2 expression is lost (23). Previously,ectopic expression of Par-4 led to the down-modulation of Bcl-2

* The costs of publication of this article were defrayed in part by thepayment of page charges. This article must therefore be hereby marked“advertisement” in accordance with 18 U.S.C. Section 1734 solely toindicate this fact.

� To whom correspondence should be addressed: Dept. of Bioimmu-notherapy, Box 422, the University of Texas M. D. Anderson CancerCenter, 1515 Holcombe Blvd., Houston, TX 77030. Tel.: 713-792-8140;Fax: 713-796-1731; E-mail: [email protected].

THE JOURNAL OF BIOLOGICAL CHEMISTRY Vol. 278, No. 22, Issue of May 30, pp. 19995–20005, 2003© 2003 by The American Society for Biochemistry and Molecular Biology, Inc. Printed in U.S.A.

This paper is available on line at http://www.jbc.org 19995

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protein expression in NIH3T3 mouse fibroblasts and in PC3prostate cancer cell lines (24). An inverse correlation in theexpression of Bcl-2 and Par-4 also has been reported in thexenografts of human androgen-dependent and androgen-inde-pendent prostate cancer developed in mice as well as in acutelymphocytic leukemia (21, 22, 24).

Par-4 is approximately a 39-kDa protein, first identified bydifferential screening for early response genes up-regulatedduring induction of apoptosis in prostate cells (25). The nucle-otide sequence of Par-4 predicts a leucine zipper protein with anuclear localization signal, although no DNA binding has beendemonstrated for this molecule (26, 27). A stretch of 70 aminoacids at the COOH terminus of Par-4 shows homology to aregion referred to as the death domain, which is also found inother pro-apoptotic proteins such as Fas, FADD, and TNFR-1(26, 28). Par-4 seems to be functionally required but not sufficientfor apoptosis (26, 28, 29). Expression of this protein was found tobe ubiquitous and not restricted to any specific organ (23).

Par-4 is known to interact with the following three proteins:the product of the Wilms’ tumor gene (WT1),1 the atypicalprotein kinase C-�, and the death-activated protein-like kinase(27, 29, 30). WT1 is a 52–54-kDa protein that possesses manycharacteristics of a transcription factor including a glutamine/proline-rich NH2 terminus, a nuclear localization domain, andfour Cys2–His2 zinc finger motifs (31). Three COOH-terminalzinc fingers share 64% homology to the zinc fingers of the earlygrowth response gene 1 (32). WT1 is involved in the transcrip-tional regulation of the bcl-2 gene (33–35). WT1 has beenshown previously (34, 35) to bind to two different sites on thebcl-2 P1 promoter to both repress and activate the transcrip-tion of this gene. Par-4 binds to two different domains of WT1and regulates the transcriptional activation and repressionpotential of WT1 (27, 36). In view of the correlation of Bcl-2overexpression and progression of prostate cancer from andro-gen dependence to independence, the observation that ectopicexpression of Par-4 can decrease Bcl-2 expression and thatPar-4 binds to WT1, we set out to examine whether Par-4utilizes WT1 to bind to the bcl-2 promoter to transcriptionallyregulate Bcl-2 expression in an androgen-independent prostatecancer cell line. We report here evidence that Par-4 can tran-scriptionally modulate Bcl-2 expression by associating with apreviously defined WT1-binding site on the bcl-2 P1 promoter.

EXPERIMENTAL PROCEDURES

All-trans-Retinoic Acid—All-trans-retinoic acid (ATRA) has beenused previously (37, 38) to down-modulate the expression of Bcl-2.Because ATRA is a hydrophobic drug and to prevent its rapid clearancedue to enhanced metabolism, we used liposomes to deliver the drug (39).L-ATRA, the liposomal form of ATRA, was prepared in bottles fromlyophilized powder in bottles containing ATRA (100 mg) in a 1:15drug:lipid formulation that consisted of soy oil and dimyristoylphos-phatidylcholine (kindly supplied by Aronex Pharmaceuticals, Inc., TheWoodlands, TX, as AtragenR). L-ATRA was stored in the dark at 4 °C,reconstituted by adding 50 ml of normal saline to each bottle, andvortexed for 2 min immediately before use.

Cell Lines, Antibodies, and Reagent—The androgen-sensitive pros-tate cancer cell line LNCaP was obtained from American Type CultureCollection (Manassas, VA) (40). The androgen-insensitive prostate can-cer cell line LNln3, which is an isogenic derivative of LNCaP, wasobtained from Dr. Curtis Pettaway, the University of Texas M. D.Anderson Cancer Center (41). Dr. Pettaway also provided the LNPro5cell line, an isogenic derivative of LNCaP derived from the fraction ofthe cells that have the propensity to stay in the mouse prostate upon

orthotopic implantation of LNCaP in nude mice (41). All cell lines wereroutinely cultured in RPMI 1640 supplemented with 10% fetal bovineserum, 2 mM L-glutamine, and antibiotics. The following antibodieswere used in the immunoblotting experiments: (a) anti-Bcl-2, a mousemonoclonal antibody; (b) anti-Par-4, a rabbit polyclonal antibody; and(c) anti-WT1, a mouse monoclonal antibody (Santa Cruz Biotechnology,Santa Cruz, CA). The secondary antibody was either anti-rabbit oranti-mouse IgG conjugated to horseradish peroxidase (Amersham Bio-sciences). Enhanced chemiluminescence reagents were purchased fromKirkegaard & Perry Laboratories (Gaithersburg, MD).

Cell Growth Assay—Cell survival was determined using the cell titerMTS/phenazine methosulfate cell proliferation assay (Promega, Madi-son, WI). Briefly, log phase growing prostate cancer cells were culturedin flat-bottomed 96-well plates in RPMI 1640, 10% fetal bovine serummedium overnight. Cells were plated at a density of 2 � 103 per well forLNCaP and LNln3 and incubated with L-ATRA at concentrations rang-ing from 1 nM to 10 �M. The effects of L-ATRA on growth were comparedwith untreated cells, which were taken to represent 100% growth.

The well contents were gently washed, and treatment was added in100 �l of medium. The number of live cells 96 h thereafter was deter-mined by the uptake of the MTS/phenazine methosulfate dye andmeasured on a �max Kinetics microplate reader (Molecular Devices,Sunnyvale, CA) at A490 nm. For each treatment, triplicates were run,and each experiment was performed three times.

Western Blot Analysis—LNCaP and LNln3 cells were plated in T75flasks and were either treated with L-ATRA (10 �M) for 96 h or leftuntreated. Following this, the cells were collected by trypsinization andwashed in PBS. Then cell pellets were lysed in 1% Nonidet P-40 lysisbuffer (150 mM NaCl, 1% Nonidet P-40, 0.5% sodium deoxycholate, 0.1%SDS, 50 mM Tris, pH 8.0) to which 2 mM phenylmethylsulfonyl fluoride,3.3 �g/ml leupeptin, and 5 �g/ml pepstatin were added fresh before use.Lysis was carried out at 4 °C for 30 min. Cells were then centrifuged at14,000 rpm for 10 min, and the supernatants were collected. Fiftymicrograms of protein from each cell line was loaded on precast SDS/Tris/glycine gels (Bio-Rad), and after electrophoresis, proteins weretransferred to nitrocellulose membranes, which were blocked in 5%nonfat dry milk and blotted with the appropriate primary antibody.Membranes were then incubated with the appropriate secondary anti-body linked to horseradish peroxidase and developed using the ECL kitaccording to the manufacturers’ protocols.

Fluorescence-activated Cell Sorter Analysis—LNCaP and LNln3 cellswere cultured in T75 flasks and either treated with 10 �M L-ATRA orleft untreated. Cells were collected by trypsinization 96 h after treat-ment and washed in PBS. Subsequently, cells were fixed in 70% ethanolovernight at �20 °C. After removal of the ethanol by centrifugation,cells were incubated with propidium iodide containing RNase A (1mg/ml) at 37 °C for 15 min. DNA fluorescence of propidium iodide-stained cells was measured by flow cytometric analysis (Coulter EpicsProfile, Coulter Corp., Miami, FL).

Immunofluorescence Microscopy—LNCaP and LNln3 cells were cul-tured in 2-chambered Falcon culture slides in the presence or absenceof 10 �M all-trans-retinoic acid for 96 h. The cells were fixed for 10 minin methanol:acetone (50:50) at �20 °C. Following permeabilization with0.1% Triton X-100 in PBS, the cells were incubated with rabbit anti-Par-4 polyclonal antibody (Santa Cruz Biotechnology, Santa Cruz, CA)in PBS containing 2% fetal calf serum, overnight at 4 °C. Subsequently,the cells were incubated with anti-rabbit rhodamine antibody (SantaCruz Biotechnology, Santa Cruz, CA), mounted in anti-bleaching solu-tion, and analyzed by laser confocal microscopy Olympus FluoviewFV500.

Real Time Quantitative PCR—Duplicate samples of 1 �l of eachcDNA were used as a template. Real time quantitative PCR was per-formed using the ABI PRISM 7700 sequence detection system (PEApplied Biosystems, Wellesley, MA). We used primers and a probegenerated by the program Primer Express (PerkinElmer Life Sciences;kindly provided by Dr. Michael Andreeff, the University of Texas M. D.Anderson Cancer Center). Bcl-2 primers were F (forward) 5�-GAG-GAGCTCTTCAGGGACGG-3� and Bcl-2 R (reverse) 5�-GGTGCCGGT-GCAGGTACTCA-3�. TaqMan probe (FAM-labeled 5�-AGGATTGTGGC-CTTCTTTGAGTTCGGTG-3�) was added to the PCR mixture to a finalconcentration of 200 nM. GAPDH primers were F (forward) 5�-GAAG-GTGAAGGTCGGAGTC-3� and GAPDH R (reverse) 5�-GAAGATGGT-GATGGGATTC-3� and GAPDH TaqMan probe fluorescence labeled 5�F5�-CAAGCTTCCCGTTCTCAGCC-3� (PerkinElmer Life Sciences) wereused as internal controls. Amplification conditions were as follows:50 °C for 2 min, 95 °C for 10 min, and then 40 cycles at 95 °C for 15 sand 60 °C for 60 s. GAPDH was co-amplified with Bcl-2.

1 The abbreviations used are: WT1, Wilms’ tumor; EMSAs, electro-phoretic mobility shift assays; IGF-II, insulin-like growth factor II;GAPDH, glyceraldehyde-3-phosphate dehydrogenase; PBS, phosphate-buffered saline; ATRA, all-trans-retinoic acid treatment; MTS, (3-(4,5-dimethylthiazol-2-yl)-5(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium.

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Northern Blot Analysis—Isolation of total RNA was accomplishedusing the TRIzol� reagent (Invitrogen). The probe for Bcl-2 was gener-ated with the 8.0-kb cDNA fragment from the Bcl-2 expression plasmidp442 (gift from Dr. T. J. McDonnell, the University of Texas M. D.Anderson Cancer Center) by cutting it with EcoRI. The probe thusgenerated was random primer-labeled with 32P using the MegaprimeTM

DNA-labeling system (Amersham Biosciences). The GAPDH probe hasbeen described previously (11) and was used as a loading control.Prehybridization and hybridization were performed at 62 °C for 30 minovernight. The blot was subjected to low and high stringency washesusing the buffers provided in the NorthernMaxTM kit for Northern blots(Ambion Inc.; Austin, TX).

Transfection and Generation of Stable Clones Expressing Par-4—LNln3 prostate cancer cell line was stably transfected with cytomega-lovirus Par-4 expression construct expressing the full-length Par-4 us-ing the calcium phosphate method (26). Stable clones expressing Par-4were selected using the G418 antibiotic. The clones were analyzed forBcl-2 and Par-4 expression by immunoblotting and were analyzed forthe transcript of Bcl-2 by Northern blot and quantitative real time PCR.

WT1 Antisense—For inhibition of WT1 expression, we used antisense(AS) deoxyoligonucleotides (5�-GTCGGAGCCCATTTGCTG-3�) thatwere complementary to the region spanning the initiation codon of thehuman WT1 (42). The P-ethoxy-modified oligonucleotide was incorpo-rated into a dioleoylphosphatidylcholine liposome formulation as de-scribed previously (43). Briefly, LNln3 cells were plated in 6-well plates(1 � 105 per well), and 10 �M antisense was added. Cells treated wereharvested after 3 days of WT1 antisense incubation. Expression of Bcl-2and WT1 proteins was determined by Western blotting.

Isolation of Nuclear Proteins Binding to Biotinylated Probes—Oligo-nucleotides representing the WT1-binding site on the bcl-2 promotersequence were synthesized, and 5 �g of the sense strand was 3�-labeledusing the terminal deoxynucleotidyltransferase (Promega) and biotin-14-dATP (Invitrogen) (34, 44). The biotin-labeled sense strand wasannealed to its complementary antisense strand and purified over a

Sephadex column. The concentration of purified oligonucleotide wasmeasured by absorbance at 260 nm, and equal amounts of annealedoligonucleotide were incubated with streptavidin-coated magneticbeads (Promega) for 30 min at room temperature. Coupling of theoligonucleotides to the beads was measured by absorbance. For thebinding reaction, 50 �g of nuclear extract alone or preincubated withanti-Par-4 antibody (R334) was used. The beads were captured by amagnet, washed three times with a high salt buffer, and resuspended inLaemmli buffer. The samples were heated at 95 °C for 5 min to elute allthe proteins, loaded onto a 12% SDS-PAGE, electrophoresed, and trans-ferred to a nitrocellulose membrane. Par-4 was detected using the Par-4antibody (R334) by immunoblotting as described earlier.

Nuclear Extract Preparation and Electrophoretic Mobility Shift As-says (EMSAs)—The double-stranded oligonucleotides used for EMSA ofthe WT1 region are shown with the WT1 site underlined and themutated bases in boldface. The B1 WT1 site in the insulin-like growthfactor II (IGF-II) P3 promoter was used as the positive control (45).Bcl-2 WT1 site, CCTTCCTCCCGCGCCCGC and GGAAGGAGGCGCG-GGCG; mutated WT1 site, CCTTCCTAATGCGCCCGC and GGAAGG-ATTACGCGGGCG; and IGF-II P3 B1 site, GGGTTGCGGGGGCGG-GCC and CCCAACGCCCCCGCCCGG. The oligonucleotides were 5�-end-labeled with [�-32P]dATP and T4 polynucleotide kinase. EMSAreactions (20 �l) contained 20 mM HEPES, pH 7.9, 0.5 mM EDTA, pH8.0, 5% glycerol, 2 �g of poly(dI-dC), 3 � 106 cpm of end-labeled oligonu-cleotide probe, and 10 �g of nuclear extracts. Leupeptin (0.3 mg/ml),phenylmethylsulfonyl fluoride (5 mM), and aprotinin (2 �g/ml) wereincluded in all nuclear extract buffers. Samples were incubated at 37 °Cfor 1 h. Electrophoresis was performed at 30 mA in a 0.5� Tris borate,EDTA, 5% polyacrylamide gel. For the blocking reaction, 400 ng each ofthe anti-Par-4 antibody (R334) and the anti-WT1 antibody specific for aregion near the COOH terminus of WT1 (C-19) were used.

Chromatin Immunoprecipitation—Chromatin immunoprecipitationwas done as described earlier with little modification (46). LNln3 cellsand LNln3 clones stably expressing Par-4 were plated in a 100-mm

FIG. 1. L-ATRA-mediated growthinhibition is restricted to androgen-independent, high Bcl-2-expressingprostate cancer cell lines. A, MTS as-say to assess the effect of L-ATRA on thegrowth of prostate cancer cell lines.LNCaP (u)and LNln3 (`)cells, plated at acell density of 2 � 103 well, were exposedto different concentrations of L-ATRA for96 h. L-ATRA concentrations ranged from1 nM to 10 �M and are represented interms of ATRA concentrations (lipid ex-cluded). B, morphological analysis ofLNCaP (top) and LNln3 (bottom) cell linesfollowing 10 �M L-ATRA treatment for96 h, because maximal effects were ob-served at this concentration. The left-hand panels represent untreated cells(control), and the right-hand panels rep-resent the morphology of cells followingL-ATRA treatment (ATRA).

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dish. About 70% confluent dishes were treated with formaldehyde (1%)for 10 min at 37 °C to cross-link proteins to DNA. The cells were washedtwice with PBS, pH 7.4, containing protease/inhibitor mixture (RocheApplied Science) and then lysed with lysis buffer containing 1% SDS.Sonication of cross-linked chromatin was performed at 30% of maxi-mum power with two rounds of 10-s pulses so that chromatin fragmentsthus obtained ranged from 500 to 2000 bp in size. Soluble chromatinwas subjected to overnight immunoprecipitation with either anti-WT1antibody or anti-Par-4 antibody. A portion of the chromatin solutionwas kept to check the amount of input DNA in different samples beforeimmunoprecipitation. Following immunoprecipitation and elution, theeluent was heated to 65 °C for 6 h to reverse the cross-link. Phenol/chloroform extraction was performed, and the supernatant was etha-nol-precipitated. DNA thus obtained was resuspended in 10 mM Tris, 1mM EDTA, pH 8.0, and subjected to PCR. LNCaP and LNln3 cellscultured in the presence or absence of 10 �M of all-trans-retinoic acid for24 h were also subjected to chromatin immunoprecipitation with theanti-Par-4 antibody. Forward and reverse primers selected for the bcl-2promoter are as follows: bcl-2 5�-AAAACTGTCTGCTTGCGCGGTA;bcl-2 3�-GTAGCTTCCTAGGTGTCCGCG; GenBankTM accession num-ber AC021803 (Homo sapiens).

Due to high GC content (36,182–36,560), PCR of the immunoprecipi-tated chromatin sample has been performed a little upstream (about

900 bases) adjacent to the predicted WT1-binding site (37,426–37,443).For that matter the modified sonication was done to have the fragmentsin the range of 500–2000 bp.

Forward and reverse primers representing a site upstream of theWT1-binding site, used as negative controls, are as follows: bcl-2 5�-AGGTTGGGGCCATGGTTTACT; bcl-2 3� CAGCCTGGGTGACAGACT-GATAC. The negative primer was designed targeting the site furtherupstream and is about 3664 bases away from the known WT1-bindingsite on the bcl-2 promoter. The PCR products were resolved on a 1.5%agarose gel and stained with ethidium bromide.

Plasmid Constructs—The bcl-2 promoter constructs are a generousgift from Linda Boxer, Division of Hematology, Stanford UniversitySchool of Medicine, Stanford, CA. The bcl-2 5� promoter (P1) deletionswere inserted into pBluescript II KS-plasmid from Stratagene. Thesedeletions all end �1287 bp from the bcl-2 translation start site. TheSacI site at �1287 has been changed to a PstI site, which is followed bya sequence of multiple cloning site of pBluescript II KS� and then theluciferase gene sequence. The LB124 is a P1 promoter deletion contain-ing the previously identified WT1-binding sites. The LB360 is also a P1promoter deletion lacking the WT1-binding sites. These constructs havebeen described previously (34, 47). Full-length Par-4 expression plas-mid is a 1.4-kb EcoRI fragment of Par-4 cDNA subcloned in the EcoRIsite of pCB6 driven by cytomegalovirus promoter. The Par-4 plasmidsare a generous gift from Vivek Rangnekar (26).

Transient Transfection and Luciferase Assays—Transfections wereperformed in 6-well plates using FuGENE 6 (Roche Applied Science)according to the manufacturer’s direction. The transfected DNA mix-ture consisted of 4 �g of the full-length construct of human bcl-2 gene5�-promoter region cloned upstream of the firefly reporter gene and 400ng of pRL-Tk (Promega), which served as an internal control for trans-fection efficiency. pRL-Tk directs expression of the Renilla luciferase(RL) using the herpes simplex virus thymidine kinase promoter. Aminimal bcl-2 P1 promoter lacking the WT1 sites described previouslywas also used. Where appropriate the transfection mixture also con-tained either the full-length Par-4 expression plasmid or an emptyexpression vector (2–4 �g). Cell extracts were prepared 24 h post-transfection and assayed for firefly and Renilla luciferase activity usingthe stop and glo kit (Promega) as directed by the manufacturer.

RESULTS

The Vitamin A Derivative, All-trans-retinoic Acid, Causes aDown-modulation of the Bcl-2 Protein and Transcript in theAndrogen-independent Prostate Cancer Cell Lines—Our initial

FIG. 2. L-ATRA decreased the expression and transcript ofBcl-2 in androgen-independent, high Bcl-2-expressing prostatecancer cell lines. A, immunoblot analysis of Bcl-2 expression in pros-tate cancer cell lines. 2 � 105 cells/well plated for LNCaP and LNln3cells were either untreated (�) or treated (�) with 10 �M L-ATRA for96 h. Fifty micrograms of whole-cell lysate was immunoblotted usingthe anti-Bcl-2 mouse monoclonal antibody. For loading control, themembranes were also blotted with antibody against �-actin. Cell ly-sates from MCF-7 breast cancer cells were used as a positive control forBcl-2 expression. Values from densitometric analysis of Bcl-2 expres-sion were normalized to �-actin. To assess the transcript of Bcl-2, realtime quantitative reverse transcriptase-PCR was performed. B, filledand open bars represent the relative amounts of bcl-2 transcript fromuntreated and treated cells (10 �M L-ATRA for 96 h), respectively. Therelative amounts of the bcl-2 transcript, as extrapolated from the stand-ard curve, are plotted.

FIG. 3. L-ATRA induces growth arrest and apoptosis in theandrogen-independent, high Bcl-2-expressing prostate cancercell lines. Cell cycle analysis by propidium iodide staining of prostatecancer cell lines is as follows: LNCaP (A) and LNln3 (B). Untreatedcontrols are shown in the left panel and following L-ATRA treatment(10 �M for 96 h) in the right panel.

TABLE IMeans of cycle threshold (CT) log values from three

independent experiments

A B C

LNCaP (0) 30.65 32.46 30.9LNCaP (L) 31.10 32.06 31.5

LNln3 (0) 30.76 30.77 29.16LNln3 (L) 32 32 30.2

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investigations of the regulation of Bcl-2 expression in prostatecancer have focused on signals that are known to down-modu-late Bcl-2. One known biological agent that has been shown todown-modulate Bcl-2 in various systems is ATRA (37, 38).Retinoids are known to induce and repress numerous genesthat modulate cell growth and differentiation and to exert theiranti-cancer action by inducing cells to undergo apoptosis (48).The relatively slow progression of prostate cancer and its as-sociation with vitamin A deficiency set precedence for use ofATRA as a therapeutic agent (49).

It has been shown previously (37) that L-ATRA, but not freeATRA, induces apoptosis in follicular lymphoma cell lines. Thisis accompanied by a decrease in the expression of Bcl-2 and anincrease in the expression of Bax, a pro-apoptotic molecule. Inprostate cancer, ATRA in conjunction with liarazole, a cyto-chrome p450 inhibitor, induces apoptosis accompanied bydown-modulation of Bcl-2 (38). Prostate cancer cells are knownto display an increased rate of ATRA clearance and metabo-lism. In order to circumvent the problem of increased clearanceand metabolism of ATRA, we used L-ATRA for our studies.

In an attempt to modulate Bcl-2 expression, we treated theprostate cancer cell lines with ATRA. We first examined theeffects of L-ATRA on the proliferation of prostate cancer celllines. L-ATRA induced a dose-dependent growth inhibition inthe androgen-insensitive line, LNln3, but not in the androgen-sensitive line, LNCaP (Fig. 1A).

Microscopic examination of LNln3 cells treated with 10 �M

L-ATRA for 96 h revealed many flattened cells with mem-brane blebbing and condensed nuclei, which are changestypical of cells undergoing apoptosis. No such changes were

observed for the LNCaP cell line following treatment withL-ATRA (Fig. 1B).

L-ATRA induced a 50% decrease of the Bcl-2 protein inLNln3 cells, as determined by densitometric scanning. Nochanges in Bcl-2 expression were observed in the LNCaP cellline (Fig. 2A).

The Bcl-2 message was also down-modulated in LNln3 cellscorresponding to the observed decrease of the Bcl-2 protein, fol-lowing L-ATRA treatment. No decrease in the Bcl-2 transcriptwas observed in the LNCaP cell line (Fig. 2B and Table I).

Decrease in Bcl-2 Expression Correlates with G1 Arrest andApoptosis in Androgen-independent Prostate Cancer CellLines—Previous studies (37) in follicular lymphoma have dem-onstrated that decreasing Bcl-2 leads to apoptosis in these cellsdue to alteration of the Bcl-2:Bax ratio. In solid tumors, includ-ing prostate cancer, decreased Bcl-2 is associated with en-hanced sensitivity to chemotherapeutic drugs (7, 8). Hence, wenext determined whether the decrease observed in Bcl-2, at theprotein and transcript level, exerted an effect on the cell cycleprofile of the prostate cancer cells. The cell cycle profile of theLNCaP cells remained unaltered following 96 h of treatmentwith L-ATRA (Fig. 3A). A significant G1 arrest (19%) was seenfor the LNln3 cell line and was accompanied by a decrease inthe S phase (14.3%) and by the appearance of a sub-G0/G1

population (15.5%), as compared with none seen for the un-treated cells (Fig. 3B). These data demonstrate that down-modulating Bcl-2 in the androgen-independent prostate cancercells produces an effect in terms of growth arrest and apoptosisin these cells. These data are in agreement with previousreports (8, 9) that demonstrated in vivo that decreasing Bcl-2 in

FIG. 4. Par-4 undergoes a change inlocalization following L-ATRA treat-ment in the androgen-independent,high Bcl-2-expressing prostate can-cer cell line. Immunofluorescence anal-ysis for Par-4 in LNCaP and LNln3 pros-tate cancer cells followed 96 h oftreatment with 10 �M L-ATRA. A, LNCaPcells with no treatment, stained for Par-4.B, nucleus of untreated LNCaP cells,stained with TO-PRO-3 iodide nucleardye; C is a superimposed image of Par-4and the nuclear stain. D, LNCaP treatedwith 10 �M L-ATRA stained for Par-4. E,nucleus of L-ATRA-treated LNCaP cells,stained with TO-PRO-3 iodide nucleardye; F is a superimposed image of Par-4and the nuclear stain. G representsLNln3 cells without any treatment,stained for Par-4. H, nucleus of untreatedLNln3 cells, stained with TO-PRO-3 io-dide nuclear dye; I is a superimposed im-age of Par-4 and the nuclear stain it rep-resents. J, LNln3 cells treated with 10 �M

L-ATRA stained for Par-4. K, nucleus ofL-ATRA-treated cells stained with TO-PRO-3 iodide nuclear dye; L is a superim-posed image of Par-4 and the nuclearstain. The R334 rabbit polyclonal anti-body against Par-4 and the anti-rabbitantibody tagged with Rhodamine wereused for detecting Par-4.

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prostate cancer is of significance to the progression and patho-genesis of this disease.

Altered Par-4 Localization and Induction of WT1 ExpressionAccompany Decreased Bcl-2 Expression—Because the down-modulation of Bcl-2 in response to L-ATRA treatment was alate event (occurring 96 h after treatment) and because thebcl-2 promoter does not have any retinoic acid response ele-ment, we next examined the potential involvement of Par-4.The rationale for investigating this is based on the strongcorrelation observed for the expression of Bcl-2 and Par-4 innormal prostate basal epithelia. In addition, a previous studydocumented that ectopic expression of Par-4 results in down-modulation of Bcl-2 in the mouse fibroblast cell line NIH3T3and in the prostate cancer cell line PC3 (24). Kinetics done forPar-4 expression following treatment with 10 �M ATRA did notreveal any change in Par-4 expression at various time pointstested in the two cell lines (data not shown).

However, Par-4 has a bipartite localization that may contrib-ute to the different interactions and functionality of this pro-tein (26, 27, 29, 30). The localization of Par-4 following L-ATRAtreatment was analyzed in the LNCaP and LNln3 cells usingimmunofluorescence microscopy. In LNCaP cells Par-4 wasfound to be cytoplasmic and nuclear in its localization. Follow-ing treatment with L-ATRA, Par-4 remains in the cytoplasm(Fig. 4, A and D). Par-4 is observed to be mainly cytoplasmic inthe LNln3 cells; however, following treatment with L-ATRA for96 h, a rise in concentration of Par-4 in the nucleus is observed,which correlated with the decreased Bcl-2 expression and tran-script in these cells (Fig. 4, E and H). The concentration ofPar-4 in the nucleus accompanied by a decrease in Bcl-2 ex-pression correlates well with the nuclear localization of Par-4in the luminal/secretory epithelial cells of the normal prostatethat lack Bcl-2 expression.

Par-4 via its leucine zipper is capable of interacting with twodifferent domains of WT1. Upon binding to the exon 5 domainof WT1, Par-4 acts as a co-activator of WT1-mediated transcrip-tional activation, whereas upon binding to the zinc finger do-main of WT1, Par-4 augments the transcriptional repressionand inhibits the transcriptional activation being mediated byWT1 (27, 36). WT1 is known to bind to two different sites on thebcl-2 promoter to activate as well as repress transcription ofthis promoter (34, 35). Hence, we next examined the effects ofL-ATRA treatment on WT1 expression.

WT1 expression was increased in LNCaP and LNln3 celllines following L-ATRA treatment (Fig. 5). However, LNCaPcells did not show any down-modulation in the Bcl-2 expres-sion, which may be attributed to the unchanged Par-4 localiza-tion in this cell line following L-ATRA treatment, as comparedwith LNln3 cells. Data from this set of experiments suggestthat altered localization of Par-4 and induction of WT1 expres-sion may be the two events required for successful down-mod-ulation of Bcl-2 in the prostate cancer cells.

Ectopic Expression of Par-4 Down-modulates Bcl-2 Proteinand Transcript—Based on the strong correlation observed be-tween Par-4, WT1, and Bcl-2 from our L-ATRA study, we next

examined the relationship between these molecules. Previousstudies (24) have shown an inverse correlation between Par-4and Bcl-2 expression. We generated stable clones expressingPar-4 in the LNln3 cell line, and we examined the effect of thison the Bcl-2 protein and message. Bcl-2 protein expression wasfound to be down-modulated in LNln3 clones stably overex-pressing Par-4 (Fig. 6A). The Bcl-2 transcript was assessed byNorthern blotting (Fig. 6B) and real time quantitative PCR(Fig. 6C) and was found to be decreased, suggesting a tran-scriptional mechanism for the Par-4-mediated down-modula-tion of the Bcl-2 protein that was previously not defined. Byusing Western blotting, we also assessed the expression of WT1in the stable clones expressing Par-4. WT1 expression wasincreased in the clones stably overexpressing Par-4 (Fig. 6D).The induction in WT1 expression observed following ectopicexpression of Par-4 corresponds to that accompanying L-ATRA-induced decrease in Bcl-2 in the same cell line. Taken together,these data suggest that WT1 expression needs to be inducedabove basal levels in the LNln3 cell line for Bcl-2 to bedown-modulated.

Blocking Endogenous WT1 Results in an Increase in Bcl-2Protein—To characterize the involvement of WT1 in the regu-lation of Bcl-2 in the LNln3 cell line, we blocked the expressionof the endogenous WT1 protein using antisense (Fig. 7). Wethen determined the effect of WT1 inhibition on Bcl-2 expres-sion. Bcl-2 expression was increased following inhibition ofWT1 expression (Fig. 7). These data indicate that endogenousPar-4 requires high levels of WT1 to cause a decrease in Bcl-2expression.

Par-4 Is Part of a Protein Complex Interacting with the WT1-binding Site on the bcl-2 Promoter—To characterize further therelationship between Par-4, WT1, and Bcl-2, we used a previ-ously identified WT1-binding site (�1460 relative to ATG) onthe bcl-2 P1 promoter as bait to pull out potential interactingmolecules (34). This bcl-2 promoter sequence was labeled withbiotin using terminal deoxynucleotidyltransferase and incu-bated with nuclear extracts from the LNln3 cell line. Followingthis, the samples were subjected to high salt washes to removeany nonspecific binding. The washed complex was pulled out,using streptavidin conjugated to magnetic beads, with the helpof a magnet. The proteins binding to the promoter were elutedby boiling in Laemmli’s buffer and subjected to SDS-PAGE,and Western blotting for Par-4 was performed using anti-Par-4antibody. Indeed, we observed that Par-4 is present in a com-plex interacting with the WT1-binding site on the bcl-2 pro-moter (Fig. 8). The Par-4-specific antibody (R334) has beenshown previously (36) to disrupt the interaction between Par-4and WT1. We could not detect Par-4 in nuclear extracts prein-cubated with the R334 antibody and then incubated with thebiotin-labeled WT1-binding site on the bcl-2 promoter. Hence,these data would suggest that Par-4 interacts with the previ-ously identified WT1-binding site on the Bcl-2 promoter, pos-sibly through WT1. These results also show the presence ofPar-4 on the bcl-2 promoter, reinforcing transcriptional controlof the bcl-2 gene by Par-4.

FIG. 5. Selective induction of WT1 following treatment with L-ATRA. Immunoblot analysis for WT1 expression in the prostate cancer celllines. Fifty micrograms of whole-cell lysate from untreated (�) or following treatment with 10 �M L-ATRA for 96 h (�) was immunoblotted for WT1using the monoclonal antibody for WT1. Whole-cell lysates from MCF-7, a breast cancer cell line, served as a positive control for the expressionof WT1. For loading control, the membranes were also blotted with antibody against �-actin.

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Par-4 and WT1 Proteins in LNln3 Cells Bind to the bcl-2(�1460) WT1 Site in Vitro—To ascertain whether both Par-4and WT1 interact with the bcl-2 promoter, previously definedWT1-binding sites on the bcl-2 P1 promoter (�1460 and�1807) were used as probes in EMSA experiments (34, 35). Thebcl-2 (�1807) oligonucleotide site did not show any complexformation upon incubation with nuclear extracts from LNln3cells (Fig. 9A, lane 6). Two complexes were formed with thebcl-2 (�1460) oligonucleotide (Fig. 9A, lane 8). Competitionwith increasing amounts of cold competitor demonstrated thatboth complexes were specific (Fig. 9A, lanes 9 and 10). Todetermine the presence of Par-4 and WT1 in the complexes

formed, nuclear extracts from LNln3 cells were incubated withthe �1460 probe along with antibodies directed against Par-4and WT1. The anti-Par-4 antibody is directed against theCOOH terminus of Par-4 and has been demonstrated previ-ously (36) as a blocking antibody. This antibody caused disap-pearance of the faster migrating complex and reduction inintensity of the slower migrating complex, thus indicating thepresence of Par-4 in both the complexes (Fig. 9A, lane 11). Theanti-WT1 antibody caused a reduction in intensity of the slowermigrating complex indicating the presence of WT1 (integrateddensity value for this complex is 76,874 in comparison to theintegrated density value for the slower migrating complex inlane 8, which is 100,096, as revealed by spot densitometricanalysis). The anti-WT1 antibody is also directed against theCOOH terminus of WT1 and has been shown previously (34) tocause reduction in intensity of specific complex containing theWT1 protein. The mutated bcl-2 (�1460) site showed veryweak complex formation (Fig. 9A, lane 4). The IGF-II promoter,P3, containing the WT1-binding site was used as a positivecontrol and demonstrated the formation of a single complex(Fig. 9A, lane 2) (34). These results support the participation ofPar-4 and WT1 in the DNA-protein complex formed at the�1460 site on the bcl-2 promoter.

The �1460 WT1-binding site was also used as a probe toperform EMSA with nuclear extracts from LNCaP and LNPro5cell lines (Fig. 9B). The �1460 site, on the bcl-2 P1 promoter,was not bound by any proteins when LNPro5 nuclear extractswere used (Fig. 9B, 13th lane). The lack of any retarded com-plex formation with the nuclear extracts of LNPro5 correlatesvery well with the barely detectable levels of Bcl-2 and Par-4 inthis cell line. However, the same nuclear extracts do showformation of DNA-protein complex when the WT1-binding siteon the IGF promoter was used as a probe (Fig. 9B, 9th lane). Nocomplex formation was observed upon using a mutated WT1-

FIG. 7. Blocking endogenous WT1 results in increase in Bcl-2expression. Immunoblot analysis for WT1 and Bcl-2 following block-ade of WT1 expression using liposome-incorporated P-ethoxy antisenseoligonucleotide targeted to the translation initiation site of WT1 (A/SWT1). LNln3 cells, plated at a cell density of 1 � 105 cells/well in6-well plates, were either untreated (left panel) or treated with 10 �M ofWT1 antisense for 3 days (right panel). Cells were harvested andimmunoblotted for WT1 and Bcl-2 expression. �-Actin was blotted forloading control.

FIG. 6. Ectopic expression of Par-4 results in down-modulation of the Bcl-2 protein and transcript. A, immunoblotting for theexpression of Par-4 in the clones generated in the LNln3 cell line to stably express Par-4. B, Bcl-2 transcript as assessed by Northern blotting. C,real time quantitative PCR for assessing Bcl-2 transcript in LNln3 cell line and clones stably expressing Par-4. GAPDH was used as a loadingcontrol and an internal control for the Northern analysis (B) and real time PCR (C), respectively. D, immunoblotting for WT1 expression in LNln3clones harboring high levels of Par-4.

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binding site as a probe (Fig. 9B, 11th lane). DNA-protein com-plexes were formed upon using nuclear extracts from theLNCaP cell line; however, these were much lower in intensityas compared with the LNln3 cell line and were competed-outupon using 50-fold excess of the cold probe (Fig. 9B, 6th and 7thlanes). Taken together, these results suggest that Par-4 andWT1 are able to bind the bcl-2 promoter at position �1460forming a multiprotein complex, which suggests their cooper-ation in driving the expression of the bcl-2 gene in the LNln3and in the lack of the same in the LNPro5 prostate cancer cellline.

Par-4 and WT1 Proteins in LNln3 Cells Bind to the bcl-2(�1460) WT1 Site in Vivo—To assess directly the potentialsignificance of physical interaction between Par-4, WT1, andthe bcl-2 promoter, we investigated whether WT1 and Par-4associate on the chromatin of endogenous bcl-2 promoter usingthe chromatin immunoprecipitation assay. We immunoprecipi-tated chromatin from the LNCaP, LNln3 cells and the clones ofLNln3 stably overexpressing Par-4, using specific antibodiesagainst WT1 and Par-4 or no antibody at all as a control.Genomic DNA fragments bound to WT1 or Par-4 were analyzedby PCR using primers upstream of the �1460 WT1 site on thebcl-2 promoter. Analysis of genomic DNA immunoprecipitatedwith anti-WT1 revealed bcl-2 promoter in both the parentalLNln3 cells and Par-4 clones (Fig. 10A, 2nd and 3rd lanes,middle panel). Immunoprecipitates from anti-Par-4 antibodyrevealed the presence of the bcl-2 promoter in both the parentalLNln3 cells and the clone with greater amounts of bcl-2 pro-moter being associated with Par-4 in the clone as comparedwith the parental cell line (Fig. 10, 2nd and 3rd lanes, toppanel). The samples subjected to the immunoprecipitation pro-cedure minus the antibody as expected did not pull out anygenomic DNA (Fig. 10A, bottom panel). Chromatin immunopre-cipitated with anti-Par-4 antibody or anti-WT1 antibody, sub-jected to PCR using primers representing a non-WT1-bindingsite on the bcl-2 promoter, did not amplify any DNA, thusdemonstrating that Par-4 and WT1 specifically bind to theWT1-binding site on the bcl-2 promoter. Together, these find-ings strongly support the idea that Par-4 and WT1 interactwith a previously defined WT1-binding site on the bcl-2 pro-moter in the LNln3 cells and that the ectopic expression ofPar-4 causes an enhanced binding of the two molecules Par-4and WT1 at this site. Neither Par-4 nor WT1 were found to bepresent on the WT1-binding site on the bcl-2 promoter in thelow Bcl-2-expressing androgen-sensitive LNCaP cells (Fig.10A, 1st lane top and middle panels, respectively).

Upon examining LNln3 cells treated with 10 �M all-trans-retinoic acid for 96 h, we observed greater amounts of the bcl-2promoter pulled down with the chromatin immunoprecipitated

with the anti-Par-4 antibody as compared with the untreatedcells, indicating enhanced amounts of Par-4 at the WT1-bind-ing site on the bcl-2 promoter that correlated with decreasedBcl-2 protein and transcript observed in these cells followingall-trans-retinoic acid treatment (Fig. 10B, 1st and 2nd lanes).Chromatin isolated from the same cells (untreated and treatedwith ATRA) immunoprecipitated with the anti-Par-4 antibody,and PCR amplified using primers representing non-WT1-bind-ing site on the bcl-2 promoter, failed to amplify any DNAthereby demonstrating that the WT1-binding site on the bcl-2promoter is required by Par-4 to bind the promoter (Fig. 10B,5th and 6th lanes).

Transrepression of Transcription by Par-4 from the bcl-2 P1Promoter in the LNln3 Cell Line—The physical data presentedabove demonstrate that Par-4 can bind to the bcl-2 promotervia a WT1-binding site. However, to determine whether theWT1-binding site on the bcl-2 P1 promoter had any functionalactivity in presence of Par-4 in LNln3 cells, transient transfec-tion experiments were performed. The constructs for the tran-sient transfection experiment are illustrated in Fig. 11A. Wedemonstrated that co-transfection with increasing amounts offull-length Par-4 resulted in decreased activity of the bcl-2promoter in a dose-dependent manner (Fig. 11B). Par-4 doesnot mediate its repression when co-transfected with a constructof bcl-2 promoter that lacks the WT1-binding site (Fig. 11B),thus indicating that the WT1-binding site is required by Par-4to transcriptionally down-modulate Bcl-2 expression in theLNLn3 cell line.

DISCUSSION

We demonstrated that Par-4 regulates the transcription ofthe bcl-2 gene by interacting with a previously defined WT1-binding site on the bcl-2 promoter. We provide evidence thatPar-4 and WT1 are involved in regulating Bcl-2 expression inprostate cancer cell lines and that ectopically expressed Par-4is involved in the transcriptional repression of Bcl-2 in theandrogen-insensitive prostate cancer cell line LNln3. Previousstudies have reported an inverse correlation between Par-4 andBcl-2; however, here we demonstrate the presence of Par-4 atthe promoter of a bcl-2 both in vitro and in vivo. We have alsodemonstrated the presence of Par-4 at the bcl-2 promoter fol-lowing all-trans-retinoic acid treatment, which correlates withthe decreased Bcl-2 protein and transcript, thus defining amechanism for retinoic acid-mediated decrease of Bcl-2 in pros-tate cancer cells. So far the regulation of Bcl-2 expression inprostate cancer has not been extensively defined. A recentstudy (20) has demonstrated the transcriptional activation ofBcl-2 in prostate cancer cell lines by NF-�B through �B siteson the P2 promoter upon treatment with TNF-�. We have

FIG. 8. Par-4 is present in the com-plex of proteins binding to the previ-ously defined WT1-binding site onthe bcl-2 promoter. Denaturing SDS-PAGE of protein complexes formed withthe WT1-binding site on the bcl-2 pro-moter. Fifty micrograms of nuclear ex-tracts from LNln3 was either electro-phoresed alone (N.E.), incubated with theWT1-binding site on the bcl-2 promoter,WT1RE (�1460 relative to the transcrip-tion initiation codon) (N.E.�WT1RE), orpreincubated with anti-Par-4 antibody(R334) (N.E.�R-334�WT1RE) before be-ing incubated with WT1RE. Lanes 4 and 5represent supernatants removed fromN.E.�WT1RE and N.E.�R334�WT1RE,respectively, following binding.

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also demonstrated that Par-4 requires the WT1-binding siteon the bcl-2 promoter to mediate repression of bcl-2 genetranscription.

Our data also indicate that an induction in the expression ofWT1, over and above endogenous levels, is required for Par-4 tosuccessfully down-modulate Bcl-2. Our study has defined amechanism of regulating Bcl-2 expression in androgen-insen-

sitive prostate cancer cells. The significance of this comes fromthe fact that previous studies (7–9) have clearly demonstratedthat decreased Bcl-2 levels sensitize prostate cancer cells tochemotherapeutic agents and also delay progression to andro-gen independence. As such, our data implicate Par-4 and itsinteracting partner WT1 in the transcriptional regulation ofbcl-2 via a previously defined WT1-binding site on the bcl-2 P1promoter.

In normal prostate epithelia, Par-4 and Bcl-2 are co-ex-pressed in the basal epithelial cells, which do not require an-drogens to survive. As these cells differentiate to luminal orsecretory epithelia, the growth and differentiation of these cellsis tightly regulated by androgens, making these cells sensitiveto apoptosis upon androgen ablation. The secretory epitheliumexpresses no Bcl-2 and lower levels of Par-4, which is inducibleupon hormonal ablation (4, 23, 24). An inverse correlation hasbeen reported for Par-4 and Bcl-2 expression in androgen-de-pendent and androgen-independent prostatic tissues from hu-man prostate cancer xenografts in the rat (the CWR22 and theCWR22R models) (4, 23, 24). It has also been demonstratedthat exogenous apoptotic insults, such as androgen withdrawalfrom prostate cancer cells, cause a decrease in Bcl-2 expression(4). Androgen withdrawal also results in induction of Par-4 inandrogen-sensitive prostatic tissue (25). Previously, ectopic ex-

FIG. 9. EMSA of the bcl-2 WT1 sites (�1460 relative to ATG). A,EMSA of the WT1 site on the IGF promoter (lanes 1 and 2), the mutatedWT1-binding site (�1460) on the bcl-2 promoter (lanes 3 and 4), theWT1-binding site �1807 on the bcl-2 promoter (lanes 5 and 6), and theWT1-binding site �1460 on the bcl-2 promoter P1 (lanes 7–12). Eachprobe is incubated (from left to right) with no nuclear extracts (lanes 1,3, 5, and 7), nuclear extracts from LNln3 cells (lanes 2, 4, 6, and 8–12),nuclear extracts from LNln3 cells incubated with 10- and 30-fold excessof the cold competitor (lanes 9 and 10, respectively), nuclear extractsfrom LNln3 cells incubated with the anti-Par-4 antibody R334 (400 ng)(lane 11), and nuclear extracts from LNln3 cells incubated with theanti-WT1 antibody C-19 (400 ng) (lane 12). B, EMSA of the WT1 site onthe IGF promoter (1st and 2nd and 8th and 9th lanes), the mutatedWT1-binding site (�1460) on the bcl-2 promoter (3rd and 4th and 10thand 11th lanes), and the WT1-binding site �1460 on the bcl-2 promoterP1 (5th to 7th and 12th to 14th lanes). Each probe is incubated (from leftto right) with no nuclear extracts (1st, 3rd, 5th, 8th, 10th, and 12thlanes), nuclear extracts from LNCaP cells (2nd, 4th, 6th, and 7th lanes),and nuclear extracts from LNPro5 cells (9th, 11th, 13th, and 14thlanes). Unlabeled probe representing the �1460 WT1-binding site onthe bcl-2 P1 promoter was added in 10-fold excess for the LNCaP andthe LNPro5 nuclear extracts, respectively (7th and 14th lanes).

FIG. 10. Demonstration of in vivo binding of WT1 and Par-4 tothe �1460 WT1-binding site on the bcl-2 P1 promoter by chro-matin immunoprecipitation assay. A, chromatin lysates fromLNCaP, LNln3 cells, and clone of LNln3 stably overexpressing Par-4were immunoprecipitated (IP) with either antibody against WT1(middle panel) or antibody against Par-4 (top panel). Samples wereprocessed as described under “Experimental Procedures.” Immunopre-cipitated DNA was amplified using primers representing the �1460WT1-binding site on the bcl-2 promoter. The bottom panel shows PCRanalysis of the total input DNA. Results are representative of twoindependent experiments. B, chromatin lysates from LNCaP, LNln3cells, and clone of LNln3 stably overexpressing Par-4 were immunopre-cipitated with either antibody against WT1 (middle panel) or antibodyagainst Par-4 (top panel). Samples were processed as described under“Experimental Procedures.” Immunoprecipitated DNA was amplifiedusing primers representing a site upstream of the �1460 WT1-bindingsite (negative control) on the bcl-2 promoter. C, chromatin lysates fromLNln3 cells either treated with 10 �M L-ATRA for 96 h (2nd lane) oruntreated (1st lane, C, control), immunoprecipitated with antibodyagainst Par-4 (top panel). The 3rd and 4th lanes represent PCR analysisof the total input DNA. The adjacent panel represents chromatin ly-sates from LNln3 cells either treated with 10 �M L-ATRA for 96 h (6thlane) or untreated (5th lane), immunoprecipitated with antibodyagainst Par-4, and the resulting DNA is amplified using the “negativecontrol” primers as described above. The last two lanes represent totalinput genomic DNA, amplified using the “negative control” primers.

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pression of Par-4 in the NIH3T3 mouse fibroblast and in thePC3 prostate cancer cell line has been shown to down-modulateBcl-2 expression (24). Furthermore, an inverse correlation be-tween Bcl-2 and Par-4 has also been reported in acute lympho-cytic leukemia. These observations suggest that Par-4 is animportant component of the pathway regulating Bcl-2 expres-sion. However, the molecular pathway(s) leading to Bcl-2 reg-ulation by Par-4 have not been defined.

Apart from translocation and amplification, the bcl-2 gene isalso subject to transcriptional, post-transcriptional, transla-tional, and post-translational regulation, which could result inits deregulated expression. We were able to demonstrate adecrease in the bcl-2 transcript corresponding to decreasedprotein following ectopic expression of Par-4, suggesting thatPar-4-mediated down-modulation of Bcl-2 expression occurs atthe transcriptional level. Par-4 is a leucine zipper moleculepossessing two nuclear localization signals; however, no DNAbinding for Par-4 has been demonstrated so far. Par-4 has beenidentified as a co-activator and a repressor for WT1-mediatedtranscription. WT1, a zinc finger transcription factor, is knownto bind to the bcl-2 promoter and modulate its transcription(27, 36). This led us to investigate the role of WT1 in thePar-4-mediated regulation of Bcl-2. We observed an inductionin WT1 expression accompanying L-ATRA-mediated down-modulation of Bcl-2 in the LNln3 cell line. Furthermore, theectopic expression of Par-4 in the LNln3 cell line also caused aninduction in the expression of WT1, which led us to believe thatPar-4 may require high levels of WT1 protein for the successfuldown-modulation of Bcl-2. This inference was confirmed whenwe blocked endogenous WT1 and observed an increase in en-dogenous Bcl-2 expression indicating that basal levels of WT1are also involved in repression of Bcl-2 to some extent; how-

ever, increasing endogenous WT1 levels over and above thebasal magnifies this effect.

Par-4 is known to regulate the transcriptional activity ofWT1 depending on which WT1 domain to which it binds (27,36). By binding to the zinc fingers of WT1, Par-4 can augmentthe transcriptional repression and inhibit the transcriptionalactivation being mediated by WT1. Upon binding to the exon5-encoded domain of WT1, Par-4 has been shown to act as aco-activator of WT1-mediated transcription and is involved inrescuing cells from apoptosis. WT1 binds to two different GC-rich sites on the bcl-2 P1 promoter, �1460 and �1807, relativeto the translation start site, and can both repress and activatetranscription of the bcl-2 gene (33–35).

We have shown both in vitro and in vivo that both the Par-4and the WT1 proteins are a part of the complex that binds tothe �1460 site on the bcl-2 P1 promoter, thus suggesting thatPar-4 mediates transcriptional control of the bcl-2 gene. The�1460 site on the bcl-2 P1 promoter was identified as a sitewhere WT1 binds and represses transcription of the normalbcl-2 allele in the t(14:18) follicular lymphoma. The same siteseems to be driving the expression of the bcl-2 gene in theprostate cancer cell lines examined because this site was boundup in the high Bcl-2-expressing cell line LNln3 and was notbound in the LNPro5 cell line, which has barely detectablelevels of the Bcl-2 or Par-4 protein and also showed a weakcomplex formation in the LNCaP cell line, which has lowerlevels of the Bcl-2 protein than the LNln3 cell line. However,increased levels of WT1 protein, achieved either by L-ATRAtreatment or by ectopic expression of Par-4, change the dynamicsof the complex at the �1460 site leading to increased amounts ofPar-4 at this site and decreased levels of Bcl-2 in the LNln3 cellline. We have demonstrated in vivo that Par-4 and WT1 arepresent at the �1460 WT1-binding site on the bcl-2 promoter inthe LNln3 cells, whereas these proteins are barely detectable inthe LNCaP cells at the same site. Ectopic expression of Par-4resulted in an increased amount of Par-4 and WT1 at the �1460WT1-binding site on the bcl-2 promoter in vivo. Treatment withall-trans-retinoic acid also caused an increased amount of Par-4at the �1460 WT1-binding site on the bcl-2 promoter. By ourpromoter assays we have demonstrated that increased binding ofPar-4 and WT1 at the �1460 site on the bcl-2 promoter trans-lates into decreased transcription of the bcl-2 gene whichrequires the WT1-binding site on the bcl-2 promoter.

Hence our results suggest that in the presence of basal orendogenous levels of WT1, Par-4 activates bcl-2 transcriptionvia the �1460 WT1-binding site of the bcl-2 promoter. How-ever, in the presence of higher levels of WT1, Par-4 repressesbcl-2 transcription via the same binding site. It can be specu-lated based on our data and previous studies (27, 36) that in thepresence of endogenous levels of Par-4, this protein binds theexon 5 domain of WT1 and behaves as a co-activator of WT1-mediated transcription of the bcl-2 gene. However, when thelevels of Par-4 in the nucleus are increased, the excess Par-4may now bind the zinc fingers of WT1, the exon 5 domain beingalready bound, and inhibit transcriptional activation of bcl-2thus changing this from an activator complex to a repressorcomplex. In addition to this, WT1 is known to have numerousisoforms, the functions of which are not totally characterized(31). Hence, there is a need to explore isoforms that may beinvolved, and whether upon induction of WT1 by L-ATRA orectopic Par-4 there is a change in isoforms of WT1 that changesthe Par-4-WT1 complex at the bcl-2 promoter from an activatorcomplex to a repressor complex. Currently, we are in the proc-ess of characterizing these interactions, and future experi-ments should yield valuable information regarding this effect.

FIG. 11. Par-4 trans-represses the bcl-2 promoter activity via aWT1-binding site. A, schematic representation of Bcl-2 luciferasereporter constructs. B, LNln3 prostate cancer cells were co-transfectedwith bcl-2 reporter constructs (P1 containing both the WT1-bindingsites or P1 without the WT1-binding sites) and the pRL-TK vector as aninternal control for transfection efficiency. At the same time the cellswere also transfected with either an empty vector or increasingamounts of full-length Par-4 (2 or 4 �g). Luciferase activity was deter-mined 24 h after the transfection. Non-transfected cells were used asthe background. All values were normalized for expression of Renillaluciferase and expressed as X-fold induction relative to the activity ofthe P1 promoter co-transfected with the empty expression vector con-trol (equal to 100). Shown is a representative experiment of the two thatwere performed.

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Kumar and Gabriel Lopez-BeresteinSangeeta K. Cheema, Sandip K. Mishra, Vivek M. Rangnekar, Ana M. Tari, Rakesh

Promoterbcl-2Par-4 Transcriptionally Regulates Bcl-2 through a WT1-binding Site on the

doi: 10.1074/jbc.M205865200 originally published online March 17, 20032003, 278:19995-20005.J. Biol. Chem. 

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