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The Analysis of Solutions and SurfacesThe Analysis of Solutions and Surfaces using TriVersa NanoMate
Mark Allen, Mark Baumert, Reinaldo AlmeidaAdvion, Harlow, UK
OutlineOutline- How it works- SolutionSolution
-Infusion - Lipid and Non Covalent Binding-LC coupling and Fraction Collection - Plant Metabolites
- SurfacesLi id E t ti S f A l i (LESA)-Liquid Extraction Surface Analysis (LESA)
- Liver – G2 ion mobility - Patient PlaquesPatient Plaques - Lung- Food/Leaves pesticide screening p g-TLC Plate Reader for compound identification
TrIVersa NanoMateTrIVersa NanoMate
IMPROVING THE PERFROMANCE OF MASS SPECTROMETRYMASS SPECTROMETRY
More time = more sensitivity = more information to identify compounds
Over 500 systems WorldWide in LeadingOver 500 systems WorldWide in Leading Laboratories
Multi purpose systemIMPROVING THE PERFROMANCE OF MASS SPECTROMETRY
N C l
LESA – tissue analysis
Metabolomics
Non Covalent Interactions
In tact protein
Metabolite Identification
Post Translation Modifications
D I iti
HistonesPlants Metabolomics
A tib d I
Chinese Medicine
Organic Chemistry Support
Drug Impurities Glycosylation/Glycomics
Lipids
Flexiblechip-based ESI system
Fast change overI f i t LC
Antibody Igg
Petroleomics
Organic Chemistry Support
Infusion to nanoLC to fraction collection
Petroleomics
Reaction MonitoringHydrogen Deuterium Exchange
Compatible with most Mass SSpectrometers
Co-Marketing AgreementsCo Marketing Agreements
Thermo FischerWaters
AB SciexBruker AB SciexBruker
and most recently..Agilent
Introducing The ESI Chip and TriVersa nanoMate:A f 400 i d d t l t lArray of 400 independent nanoelectrospray nozzles
The ESI ChipTM – A Stand Alone Source
V220 x 106 V/mIn the ESI Chip, the electric
field around the nozzle tip is formed from the potential pdifference between the microfabricated silicon substrate as an integrated counter electrode and the voltage applied to the fluid i th d ti i tt ti
• Incorporation of the ESI counter electrode into the spray nozzle
via the conductive pipette tip.
• Incorporation of the ESI counter electrode into the spray nozzle.This is very different from conventional electrospray devices, which define the electric field by the potential difference between the spray device (fluid potential) and the mass spectrometer inlet or atmospheric pressure ionization (API) interface.
• As the distance between the electrodes is only a few microns and t t t l t d t bl l t i fi ld iconstant, an extremely strong and stable electric field is
reproducibly generated, essentially decoupling the ESI process from the inlet of the mass spectrometer.
NanoMate Advantages Over Pulled Capillary NanoSprayNanoSpray
Conventional pulled capillary NanoMate Advantages• One analysis per capillary• Manual operation• Great expertise required• Avg throughput: 8 10
• Up to 400 analyses per chip• Fully automated• Minimal expertise required• Avg throughput: 100’s samples/day• Avg. throughput: 8-10
samples/day• Unpredictable spray stability may
compromise data quality
• Avg. throughput: 100 s samples/day• Better data quality and improved
quantitation over pulled capillaries• No microscope needed
Automated InfusionAutomated Infusion
Samples are Introduced to the Chip InletUsing Conductive Pipette TipsUsing Conductive Pipette Tips
Silicon chip bearing a20 x 20 array of 10 μm ID
nanospray nozzlesHigh Voltage850 1500 V
MS
850-1500 VSample
MSOrifice
10 μL conductive pipette tip
NanoESI flow rates approx 100 to 500 nL/min
TriVersa NanoMateTriVersa NanoMate
Why do our customers use the TVNM ?Why do our customers use the TVNM ?– Infusion
• Long stable spray from small sample volumes• Zero carry-over infusion analyses of simple samples
Protein Core Laboratories - protein structure/research Non covalent interactionsNon covalent interactionsIntact protein Identification Histone Characterization P l i difi i (PTM) Ch i iPost translation modifications (PTM) CharacterizationGlycosylation
Lipidomics (maybe in hospitals and pharma also)
Lipid Analysis, Novel High-Throughput Methodology for Lipidome Analysisfor Lipidome Analysis
“High throughput, reproducible and sensitive analysis of total lipid extracts much easier.”
Reference: Christer Ejsing PhD Thesis 2007, Molecular Characterization of the Lipidome by Mass Spectrometry Technische Universität Dresden http://deposit d nb de/cgi
Laboratory: Dr Andrej ShevchenkoSpectrometry, Technische Universität Dresden http://deposit.d-nb.de/cgi-
bin/dokserv?idn=983638306&dok_var=d1&dok_ext=pdf&filename=983638306.pdfDr. Andrej ShevchenkoMPI Mol Cell Biol & GeneticsDresdenGermany
Automated Shotgun Lipidomics – yeast cells
“We achieved the absolute quantification of 250 molecular lipid species covering 21 major lipid classes.” “This analysis provided 95%This analysis provided 95% coverage of the yeast lipidome achieved with 125-fold improvement in sensitivity compared with previous approaches.”
The lipid metabolic network of S. cerevisiae. Enzymes are annotated by gene name (essential genes are indicated in red). The lipid metabolic networkwas compiled using the Saccharomyces Genome Database (www.yeastgenome.org) and references therein. Lipids monitored by absolute quantification are indicated by green circles. Lipids that were only identified are shown by gray circles.
Reference:Ejsing CS, Sampaio JL, Surendranath V, Duchoslav E, Ekroos K, Klemm RW, Simons, Shevchenko A (2009): Global analysis of the yeast lipidome by quantitative shotgun
Laboratory:Dr. Andrej ShevchenkoMPI Mol Cell Biol & GeneticsDresdenGlobal analysis of the yeast lipidome by quantitative shotgun
mass spectrometry. PNAS 106 (7), 2136-2141.DresdenGermany
Non-covalent Interaction, Compound Screening
“… high sample throughput.” Determination of the dissociationconstants (Kd) for the complexes of two different proteins with their ligands.
“… improving analysis reproducibility.”
“… eliminates carryover”
“… very small sample consumption”
“great potential for rapid screening of compound libraries in drug discovery programs.”
Reference:Zhang S, Van Pelt CK & Wilson DB (2003): Quantitative Determination of Noncovalent
Laboratory: Prof. David B. Wilson
Binding Interactions Using Automated Nanoelectrospray Mass Spectrometry. Anal. Chem. 75, 3010-3018.
Molecular Biology and Genetics Cornell University, New York USA
Non Covalent Interactions Receptor-Ligand-InteractionsPheromone Binding Protein (PBP)
Bombykol
ight
: MPI
Bio
phys
ical
ibpc
.mpg
.de/ Ligand-bound PBP
Unbound PBP
Bombyx moriPict
ures
Cop
yri
Che
mis
try,
http
://w
ww
.mp
Principle of the Assay:Ratio of ligand-bound PBP/ unbound PBP/ unbound PBP at increasing ESI-MS cone voltages
Reference:Hooper AM, Dufour S, He X, Muck A, Zhou J-J, Almeida R, Field LM, Svatos A, Pickett JA (2009): High-throughput ESI-MS analysis of binding between the Bombyxmori pheromone-binding protein BmorPBP1, its pheromone components and some
Laboratory:Dr. Aleš SvatošMax Planck Institutefor Chemical Ecologyp g p , p p
analogues. Chem. Commun. 5725–5727. for Chemical EcologyJena
NanoLC couplingNanoLC coupling
0.2 - 0.8 µL/min
nanoLC or Nanoaquity butt connected via teflon sheath
Move to next nozzle in 3 seconds so no sample loss if sprayer plugs mid run
Use your own nanoLC columnsUse your own nanoLC columns
TriVersa NanoMateTriVersa NanoMate
Why Do our customers Use for NanoLC?Why Do our customers Use for NanoLC?– NanoLC coupling
• The most stable nanoESI for direct coupling to nanoLC.• Automated next nozzle in 3 seconds • Fast change from Infusion to nanoLC
Peak Area ComparisonPeak Area ComparisonRT: 3.20 - 3.40
NL 3 06E5
ESI ChipPeak Area ~2x60
70
80
90
100
ndan
ce
RT: 3.26AA: 415254
NL: 3.06E5TIC F: + c NSI SRM ms2 653.901 [906.399-906.401] MS ICIS 08apr10_003
Peak Area ~2x greater
10
20
30
40
50
Rel
ativ
e Abu
n
RT 3 26 NL: 8 40E4
Other Nanospray S
60
70
80
90
100
RT: 3.26AA: 232397
NL: 8.40E4TIC F: + c NSI SRM ms2 653.901 [906.395-906.405] MS ICIS
Source10
20
30
40
50
3.20 3.22 3.24 3.26 3.28 3.30 3.32 3.34 3.36 3.38Time (min)
18Nano-LC/MS in Routine Bioanalysis: Application to Human NGF Biomarker StudiesPresented by: Gary A. Schultz, PhDhttp://advion.com/events/webinars.php
TriVersa Spray Sensing Technology
High aqueous, higher spray current ~125nA
Re-equilibration of analytical column
Low aqueous, lower spray current ~40nA
19
TriVersa NanoMate – Lockmass capability
Fraction Collection
200µL/min
Fraction Collection
200µL/min
0,2 µL/min HPLC
5 - 1000 µL/min
199,8 µL/min
Robotic
Nanoelectrospray
ProbeBackpressure
20s / Fraction 67 µL / FractionInfusion
Conductive Pipette0 – 3 kV
ArmProbe
~ 0.2 psi
TriVersa NanoMate for Higher FlowsTriVersa NanoMate for Higher Flows 320um columns and above
Set-upSet up
TriVersa-NanoMate
Fraction collection into 384 plates (or 96 plates)
240 µL/min incoming flow
Robotic arm for fractioncollection and later Infusion
240 µL/min incoming flow rate
Low volume splitting ‘T’
300 nL/min to nESI chipand MS
≤ 0.2 % of the flow
22
The Power of Signal Averaging
TriVersa NanoMate Users – Fraction C ll ti ith i f iCollection with infusion
PharmaceuticalDrug Metabolism/DMPK – development
Radioactive metabolites
Drug Impurities
Chinese Medicine More information from complex samples.
AcademiaMetabolomicsPlant Metabolomics
p p
BiotechAntibody IGG
Traditional Chinese Medicine Sample Profiling with UPLC/oaTOF/NanoMateUPLC/oaTOF/NanoMate
John Shockor, Waters Corporation June, 2009
UPLCTriversa Nanomate
ACQUITY UPLC/Xevo Qtof MS with MSE
Maximum chromatographic resolution,sensitivity, and speedExact mass analysis with data-rich information
ACQUITY UPLC/Xevo Qtof MS with MSE
Maximum chromatographic resolution,sensitivity, and speedExact mass analysis with data-rich information
MarkerLynx XS data processingIdentify leading markers using extended statistical analysis tool
such as PCA/OPL
MarkerLynx XS data processingIdentify leading markers using extended statistical analysis tool
such as PCA/OPL
Synapt HDMSFraction Collection with NanoMate
Infuse fraction collected back into MS for MSMS analysis for structural elucidation
Fraction Collection with NanoMateInfuse fraction collected back into MS for MSMS
analysis for structural elucidation
NanoMate can quickly switch between LC, fraction collection and infusion mode Re-inject Fraction into UPLC/Qtof MS
for further separationRe-inject Fraction into UPLC/Qtof MS
for further separationLockmass compatible
for further separationSeparate isomers, coeluted peaks so that more detailed info about the sample can be revealed
for further separationSeparate isomers, coeluted peaks so that more detailed info about the sample can be revealed
Glycomics, high throughput brain ganglioside (GG) analysis
“… improved ionization NanoMate robot was coupled to a high-capacity ion trap (HCT) mass spectrometer to create a system merging automatic chip-based electrospray ionization (ESI) infusion, ultrafast ion detection, and multistage sequencing at superior sensitivity.
efficiency”“… improved signal stability”“… high run-to-run
NanoESI chip MS experiments enabled the identification of more than 50 glycoforms exhibiting a high degree of heterogeneity in the ceramide motifs and alterations such as O-acetylation.
25 distinct GG species … were identified for the first time.
reproducibility”„... >15-fold sensitivity increase”increase
… method of choice in modern glycomics”
Reference:Almeida R, Mosoarca C, Chirita M, Udrescu V, Dinca N, Vukelic Z, Allen M, Zamfir AD
Laboratory: PD Dr. Alina D. Zamfir
(2008):Coupling of fully automated chip-based electrospray ionization to high-capacityion trap mass spectrometer for ganglioside analysis. Analytical Biochemistry 378, 43-52.
Mass Spectrometry Laboratory, National Institute for Research and Development in Electrochemistry and Condensed Matter, 300224 Timisoara, Romania
Plant MetobolismUPLC-FTICR-MS coupling via TriVersa NanoMateSolution:
Source: Bettina Seiwert, DGMS, Konstanz, 2009, Advion Lunch Seminar.
Reference:Giavalisco P, Köhl K, Hummel J, Seiwert B, Willmitzer L (2009): 13C Isotope-labeled metabolomes allowing for improved compound annotation and relative quantification in liquid chromatography-mass spectrometry-based metabolomic
Laboratory:Prof. Dr. Lothar WillmitzerMPI Molecular Plant PhysiologyPotsdam-Golmq q g p y p y
research. Anal. Chem. 81 (15), 6546-6551.Potsdam GolmGermany
Antibody - Analysis of Glycosylation Structures.b
ioch
.ox.
ac.u
k/gl
ye/
igg1
.gif
Sour
ce:
http
://w
ww
cob/
arch
ive
“CID-MS/MS analysis (was done) by static nanosprayy ( ) y p yinfusion using a Triversa Nanomate (Advion Biosciences, Ithaca, NY). CID-MSn was carried out on the glycosylatedand non-glycosylated chymotryptic peptide NSGAL at a collision energy of 25–30 V.”gy
Reference:Valliere-Douglass JF, Kodama P, Mujacic M, Brady LJ, Wang W, Wallace A, Yan B, Reddy P, Treuheit MJ, Balland A (2009): Asparagine-linked oligosaccharides present on a non-consensus amino acid sequence in the CH1
Laboratory:Dr. Alain BallandProcess and Product Developmentoligosaccharides present on a non-consensus amino acid sequence in the CH1
domain of human antibodies. JBC 284 (47), 32493-32506.Product DevelopmentAmgen Inc., USA
LESA – Liquid Extraction Surface Analysis
Simultaneously identify drugs and their phase I
y
Simultaneously identify drugs and their phase I & II metabolites directly from tissue samples
using chip-based NanoESIusing chip based NanoESI28
Normal Operation using the TriVersa NanoMate SystemSyste
Mass Spectrometer
Sampling tip
Nozzle
Aspirate sample
T f l
Sample
Transfer sample
Apply HV, spray samplewith 200nl/minSample with 200nl/min
Operation using the TriVersa NanoMate Systemfor LESA
Mass Spectrometer
Sampling tip
Nozzle
Sample Aspirate solvent
Solvent
Dispense solvent on sampleAspirate sample solutionTransfer sampleSolvent a s e sa p eSpray sample
LESA Workflow
Step 3 – Analyte IonizationRobot aspirates extracted analytes from target and
i i i l
Step 1 – Solvent DeliveryDisposable Tip picks up
extraction solvent at reservoir
Step 2 – Analyte ExtractionRobot places extraction
solvent on target and initiates aspirate/dispense cycles for
initiates electrospray at a 400 nozzle nESI chip
analyte extraction
Resolution of
K t V V B k l GJ F ll t t d li id t ti b d f li d i i ti i
Resolution of approx. 1mm
Kertesz V, VanBerkel GJ: Fully automated liquid extraction-based surface sampling and ionization using a chip-based robotic nanoelectrospray platform. Journal of Mass Spectrometry 2009 45(3) 252-60
TriVersa NanoMateTriVersa NanoMate
Why do our customers use the TVNM ?Why do our customers use the TVNM ?• Liquid Extraction Surface Analysis for
direct analysis of tissuedirect analysis of tissue– NanoESI quality data directly from a surface– Complimentary to MALDIp y– See analytes that may not be visible using MALDI – Validate MALDI results or Prescreen prior to MALDI
Long stable infusion times enables signal averaging and ion– Long stable infusion times enables signal averaging and ion mobility investigations
• No matrix interference as no matrix used so Less suppression than MALDI (<500 Damatrix signal) due to liquid extraction
• Semi quantitative, but we need more proof here
Surfaces Analyzed using LESASurfaces Analyzed using LESA
-Whole TissueWhole Tissue- Liver- Patient Plaques - Lipids - Lung - Food/Leaves pesticide screening TLC Pl t R d f d id tifi ti-TLC Plate Reader for compound identification
Tissue: 7.5 mg/kg propranolol, IV dosed mouse, 60 min after doseEluent: 80/20/0.1 ACN/H2O/FA
Data collected: MRM mode, 1 min/sample
15 45 13
Dosed tissue Control tissue
12 3
45 6 5 632
nsity
, cps
10000
15000
20000
nsity
, cps
10000
15000
20000stomach
liverlung
kidneymuscle
brain
brain liver
Propranolol Propranolol
4 6 8 10 12 14
Inte
n
0
5000
14 16 18 20 22 24
Inte
n
0
5000liver
kidney muscle lung stomach
Hydroxypropranolol glucuronide Hydroxypropranolol glucuronide
nten
sity
, cps
5000
10000
15000
20000
Inte
nsity
, cps
5000
10000
15000
20000(Phase II) (Phase II)
4 6 8 10 12 14
I 014 16 18 20 22 24
I 0
t,min t,min
Analysis of Tissue using LESA + Synapt G2
Eleanor Blatherwick, Sue Slade and Jim Scrivens
School of Life Sciences
University of Warwick
Ion mobility cell
Ad iAdvionTriVersa
Nanomate
Liquid Extraction Surface Analysis
(LESA) ( )
Collision energy can either be applied in the trap or transfer regions, allowing mobility separation after or before y p
fragmentation respectively.
University of Warwick
Selectivityy
LESA LESA LESA LESALESA LESA LESA LESA
MS MSMS MS
MS/MS
Ion Mobility
MS/MS
MS/MS Ion Mobility
University of Warwick
MS/MS Ion Mobility
Fenclozic acid• Drug compound – Fenclozic acid• [M+H]+= 254 m/z• Contains one chlorine atom
• Characteristic isotope pattern in mass spectrum• 3:1 intensity ratio of Cl35:Cl37
Nano-ESIvoltage
1.55 kV
• Fenclozic acid administered to rats at 10 mg/kg• Livers harvested from both dosed and
Gas pressure 0. 5 psi
Extraction solvent
1 µl 50 % ACN + 0.1 % formic acid
control rats, sectioned to 30 µm• Frozen & stored at ‐80˚C
(aq)
Extraction time 5 seconds on tissue.
• Positive ion HDMS/MS mode• MS/MS transition of m/z 254 – 208• Ion mobility separation prior to MS/MS f t tifragmentation
Blatherwick, E.Q., Van Berkel, G.J. et al. (2011) XENOBIOTICA 41 (8) 720-734.
LESA –MS/MS spectra
Drug gstandard
Dosed tissue section
NegativeNegative control tissue section
Blatherwick, E.Q., Van Berkel, G.J. et al. (2011) XENOBIOTICA 41 (8) 720-734.
LESA – arrival time distributions
Drug
• Extracted arrival time distribution through the mobility cell of m/z 254 ion
a)
b)
Drug standard
y /
• Same mobility profile for drug standard and dosed
Dosed tissue section
drug standard and dosed tissue
• Different mobility profile
Negative
Different mobility profile for control tissue
• Provides additionalNegative control tissue section
• Provides additional evidence that fenclozicacid is being detected from dosed tissue samplesdosed tissue samples
Blatherwick, E.Q., Van Berkel, G.J. et al. (2011) XENOBIOTICA 41 (8) 720-734.
Diclofenac• Drug compound – Diclofenac•Common non‐steroidal anti‐inflammatory drug (NSAID)• [M‐H]‐= 294 m/z• Contains two chlorine atoms• Readily formed fragment ion at m/z 249
Nano-ESI -1.56 kV
• 14C‐Diclofenac administered to mice at 10 mg/kg• Whole‐body sections Nano ESI
voltage1.56 kV
Gas pressure
0. 6 psi
• Mounted on tape, dried & stored at room temperature
N ti i HDMS/MS dExtraction solvent
1 µl 80 % ACN (aq)
Extraction 5 seconds on
• Negative ion HDMS/MS mode• MS/MS transition of m/z 249 – 213• Ion mobility separation following MS/MS fragmentation Extraction
time5 seconds ontissue, 1second delaypost aspiration
fragmentation
University of Warwick
LESA Sampling/ionisation
Diclofenac parent i I l iion
m/z 294Isolation
MS/MS fragmentation
Activation
Ion mobility Separation
MS/MS D t tispectra Detection
University of Warwick
Improving selectivitya) 1 µg
Diclofenac
b) 100 ng
c) 10 ngLESA
sampling positions
Diclofenac spotted
• Control rat kidney sections
positions
• Three different concentrations of diclofenac spotted onto tissue:• a) 1 µg diclofenac dosed on tissue.• b) 100 ng diclofenac on tissue.• c) 10 ng diclofenac on tissue.
LESA MS used to sample across the kidney at each sampling positionLESA‐MS used to sample across the kidney at each sampling position indicated using the selective mobility MS/MS method.
University of Warwick
Improving selectivity ‐ATDsa)
Kidney tissue only
b) c)1 µg 100 ng 10 ng
Diclofenac on tissue
The extracted arrival time distributions (ATDs) for m/z 249 (Red) and the resulting m/z 213 daughter ion (Black) through the mobility cell are displayed above for two
samplings from each tissue sectionsamplings from each tissue section.
These results indicate that with an IMS separation after MS/MS fragmentation, di l f b fid tl id tifi d ith j t 10 tt d tidiclofenac can be confidently identified with just 10 ng spotted on tissue.
University of Warwick
Dosed whole‐body sections 3 hours post‐doseKidney Sampling points
Liver Brain
LESA-IMS-MS/MS sampling of wild type mouse whole body tissue section 3 hours post-dose. Arrival time distribution of m/z 249 (red) and m/z 213 (black) from a) kidney b) liver and c) brain. d) Optical image f ( ) ( ) f ) y ) ) ) p g
of WT whole-body tissue section, with sampling positions highlighted in yellow.
University of Warwick
Dosed whole‐body sections 24 hours post‐dose
KidneySampling points
Liver Brain
LESA-IMS-MS/MS sampling of wild type mouse whole body tissue section 24 hours post-dose. Arrival time distribution of m/z 249 (red) and m/z 213 (black) from a) kidney b) liver and c) brain. d) Optical
image of WT whole-body tissue section, with sampling positions highlighted in yellow.
University of Warwick
Lipid Analysis of Atherosclerotic Plaqueswith LESATM
“Lipids were directly analyzed from tissue sections with a Adviontissue sections with a AdvionTriVersa NanoMate … “
“Notably, LESA allowed a rapid analysis of plaque lipids directly from tissue sectionswithout time and labor-intensive sample preparation.”
„The solvent extraction volume was 1.5 μL (chloroform/methanol/isopropanol 1:2:4 containing 7.5 mM
i t t ) d th di d l 1 0 L
References:Stegemann C, Drozdov I, Shalhoub J, Humphries J, Ladroue C, Didangelos A, Baumert B, Allen M, Davies AH, Monaco C, Smith A, Xu Q, Mayr M (2011): Comparative Lipidomics Profiling of Human Atherosclerotic Plaques. Circ. Cardiovasc. Genet p blished online April 21
Laboratory:Prof. Dr. Manuel MayrKing‘s College London
ammonium acetate) and the dispensed volume was 1.0 μL.
Genet., published online April 21. UK
Lipid Analysis of Atherosclerotic Plaqueswith LESATM
“The signals as well as the signal intensities were comparable to shotgun lipidomics of tissue extracts”
References:Stegemann C, Drozdov I, Shalhoub J, Humphries J, Ladroue C, Didangelos A, Baumert B, Allen M, Davies AH, Monaco C, Smith A, Xu Q, Mayr M (2011): Comparative Lipidomics Profiling of Human Atherosclerotic Plaques. Circ. Cardiovasc. Genet p blished online April 21
Laboratory:Prof. Dr. Manuel MayrKing‘s College London
Genet., published online April 21. UK
Lipid Analysis of Atherosclerotic Plaqueswith LESATM
“To our knowledge, this study is the most
h icomprehensive MS analysis of the lipid content in human atherosclerotic plaque toatherosclerotic plaque to date.”
References:Stegemann C, Drozdov I, Shalhoub J, Humphries J, Ladroue C, Didangelos A, Baumert B, Allen M, Davies AH, Monaco C, Smith A, Xu Q, Mayr M (2011): Comparative Lipidomics Profiling of Human Atherosclerotic Plaques. Circ. Cardiovasc. Genet p blished online April 21
Laboratory:Prof. Dr. Manuel MayrKing‘s College London
Genet., published online April 21. UK
Guinea Pig lung model• Whole Guinea pig lung is extracted
from the animal, connected to aperfusator and mechanically ventedperfusator and mechanically ventedusing a cannula inserted into thetrachea and connected to a smallrodent ventilator (60 strokes/minuteat 2 mL/stroke)
• Lung Tissue model dosed intra-tracheally with 3 mg Fluticasonepropionate in 5 mL air using apropionate in 5 mL air using amicro-sprayer needle
• Lung Tissue was then frozen, slicedin 16 um thickness and placed onpglass slides for vacuum drying andfurther LESA processing
Tissue samples and pictures courtesy of Walter Korfmacher and Fangbiao Li from Merck Research Laboratories
MS data from location ‘B3’MS data from location B3Q1 scan, negative ion mode
MS/MS of m/z 499.1, negative ion modeQ , g
Fl ti i tFluticasone propionate(M-H)-
Analytical standard: negative ion modenegative ion mode MS/MS m/z 499.3
B3
Positive vs. negative ion mode SRM(9 mm lateral resolution)
B2 B4B3 B5 B6
1,000,000 1,000,000
B2 B4B3 B5 B6
100,000
ty cps)
ity cps)
363,00
0
±3
10,000
, ,
100,000
10,000
, ,
Ca. 10x signal improvement in negative ion
d
M signa
l inten
siative ion mod
e (
M signa
l inten
sitive ion mod
e (c
0
13,200
257
500
506
83
1,000
10,000
1,000
10,000mode
100SRne
ga SRpo
si
340
80
2
124 5
190 5
10
100
10
0 0
B2 B4B3 B5 B6
Pesticide Screening from Food Surfaces
GSpinach
L f
Grape-half
Leaf
Apple SkinSkin
54
Spray Set-up ‘Pump’AerosolSpray Set upUsing 4 mL Methanol spray
Pump Aerosol Sprayer
g p ytotal equaling 1/20 of tolerance level (8,000ng):-400 ng/g Malathion
500 ng/g Se in- 500 ng/g Sevin- 10 ng/g Simazin- 20 ng/g Carbofuran- 100 ng/g Diazinon (no known tolerance level)
Spray bottle rinsed with MeOH
‘Real World’ Sprayer
Spray bottle rinsed with MeOH before use
55
S.E. Edison, et al. Surface swabbing technique for rapid screening for pesticides using ambient pressure desorption ionization with high-resolution mass spectrometry, RCMS, 2011 25, 127-139
Structures of PesticidesMalathion CarbofuranDiazinon
MW 330.1(M+H)+: 331.0434
MW 304.1(M+H)+: 305.1083
MW 221.1(M+H)+: 222.1126
SimazineSevin
(Isobaric Compounds)
MW 201.1(M+H)+: 202.0864
MW 201.1(M+H)+: 202.0854
Infusion of 50 uM Equimolar Mixture in S S l t E tiSpray Solvent: Exactive
Di iDiazinon
SimazineSevin Carbofuran
Simazine
Malathion
57
58
Apple – Exactive MalathionMalathion
Sprayed Apple(20x below tolerance level – 400 ng/g Malathion)
Apple from Supermarket
Theoretical mass spectrum of Malathion
Malathion detected at 2.7 ppm deviation from
(M+H)+ = 331.0434
59
ppm deviation from theoretical value
Apple – Exactive CarbofuranCarbofuran
Sprayed Apple(20x below tolerance level – 20 ng/g Carbofuran)
A l f S k hApple from Supermarket: shows trace carbofuran present.
Apple from Supermarket, additionally washed
Theoretical mass of Carbofuran
Carbofuran detected at 3.1 ppm deviation from theoretical value
60
Also detected from purchased Apple, needed extra cleaning to wash off !
Summary of LESA for Pesticide S iScreening
• Rapid (<2 min/sample) screening for pesticides on food surfaces is feasiblesurfaces is feasible
• Detection limits easily see 20-fold below tolerance levels• Method is automated without conventional sample preparation
or chromatographyor chromatography– ‘preparation’ is placing a sample skin or leaf on a glass slide
• High mass resolution and MS/MS techniques are complimentarycomplimentary
• Trace evidence for carbofuran in purchased apple and diazinon in purchased grape and spinachp g p p
• ‘Liquid extraction surface analysis (LESA) of food surfaces employing chip‐based nano‐electrospray mass spectrometry’employing chip based nano electrospray mass spectrometry Henion et al RCM 2011
TLC-MS/MS: Integrated Liquid Surface Sampling-Nano Electrospray Determination of Small Drug Molecules
from Thin Layer Chromatography Platesfrom Thin Layer Chromatography Plates.
TriVersa NanoMate
6262
TriVersa NanoMate Pipette tip ‘Extracting’ spot from TLC Plate
Strychnine LESA Mass Spectra of TLC Spot from Dog Stomach Contents 335
(M+H)+LTQ Q1 Full-scan MS of dog 100(M+H)+LTQ Q1 Full scan MS of dog
stomach contents
30405060708090
elat
ive
Abu
ndan
ce
263.08156.00 189.00 217.08
Davidow developing solvent85/10/5 ETOAc/ MeOH/NH4OH
Strychnine
LTQ full-scan CID mass spectrum from dog stomach contents 100 150 200 250 300 350 400
m/z
0102030R
e
163.08 227.00 239.17371.08309.25294.92195.08 351.25 393.25258.00 330.92
Solvent Front
5060708090
100e
Abu
ndan
ce264.13264
(M+H)+
100 150 200 250 300 350 400m/z
010203040
Rel
ativ
222.10234.10184.06 272.13220.10 307.20248.16
194.11 335.25168.09156.08122.03106.03 353.32 370.98
Full scan CID mass spectrum of standard strychnine
5060708090
100
ve A
bund
ance
Full-scan CID mass spectrum of standard strychnine
264 (M+H)+
MW=334
264.11
g St
d
g St
d
xtra
ct
olve
nt
6363100 150 200 250 300 350 400
m/z
010203040
Rel
ativ
222.10234.11184.04 272.13220.08 307.20248.16194.09 335.21168.08156.08122.04108.01 353.06 371.04 388.97
200
ng
200
ng ExSo
AcknowledgementsAcknowledgements• Mark Baumert, Reinaldo Almeida, Simon Prosser, Daniel
Eikel and Jack Henion, Advion• Dr. Shaun MacMahon, FDA's Center for Food Safety
and Applied Nutrition (FDA- CFSAN)and Applied Nutrition (FDA CFSAN)• Dr. Tim Croley, FDA• Vilmos Kertesz and Gary Van Berkel of ORNL for first
d t ti LESA f ibilitdemonstrating LESA feasibility
Multi purpose systemMulti purpose system
N C l
LESA – tissue analysis
Metabolomics
Non Covalent Interactions
In tact protein
Metabolite Identification
Post Translation Modifications
D I iti
HistonesPlants Metabolomics
A tib d I
Chinese Medicine
Organic Chemistry Support
Drug Impurities Glycosylation/Glycomics
Lipids
Flexiblechip-based ESI system
Fast change overI f i t LC
Antibody Igg
Petroleomics
Organic Chemistry Support
Infusion to nanoLC to fraction collection
Petroleomics
Reaction MonitoringHydrogen Deuterium Exchange
Conclusion
TriVersa NanoMate® and
RePlayTM are integral partsRePlayTM are integral parts
of modern LC/MS-
applications, improving the
stability, information
quality and sample
throughput in many areas
of molecular analysis.
Examples from Published Studies
Customers from Central Europe using the TriVersa NanoMate include:
Selected Users - TriVersa NanoMateApplication Name Facility Country
Protein Core Lab Bruce Stanley Penn State University USA
Protein Core Lab Leslie Hicks Danforth Agricultural Center USA
Protein Core Lab Allis Chien Stamford University USA
Protein Core Lab Mark Skehel Cancer Research UK UK
Protein Core Lab Marta Vilaseca Casas University Barcelona Spain
Protein Core Lab Helen Cooper University of Birmingham UK
Protein Core Lab Kostas Petritius Translational Genomics Research Institute USA
Protein Core Lab Manuel Mayr Kings College London UL
Non Covalent Interactions Alison Ashcroft University of Leeds UK
Non Covalent Interactions Carol Robinson University of Cambridge UK
Non Covalent Interactions John Crosby University Of Bristol UK
Non Covalent Interactions Ales Svatos MPI Jena Germany
Non Covalent Interactions Alain Van Dorssellar University of Strasbourg France
In tact Protein ‐Top Down Stephen Master university of Pennsylvania USA
In tact Protein ‐Top Down Neil Kelleher University of Illinois USA
In tact Protein ‐Top Down Ying Ge University of Wisconsin USA
In tact Protein ‐Top Down Alan Marshall University of Florida USA
In tact Protein ‐Top Down Julia Chamot‐Rooke Ecole Polytechnic France
Histones Alex Imhof University of Munich Germany
Glycosylation Carlito Lebrillo UC Davis USAy y
Glycosylation Vern Reinhold University New Hampshire USA
Glycosylation Catherine Costello University of Boston USA
Glycosylation Igor Almeida University of Texas El Paso USA
Lipids Xianlin Han Washington University St. Louis USA
Lipids Andrej Schevchenko MPI Dresden GermanyLipids Andrej Schevchenko MPI Dresden Germany
Lipids Christer Ejsing University of Southern Denmark Denmark
Lipids Dr Taguchi University of Tokyo Japan
Lipids Dominic Schwudke Tata Research Intitute India
Organic Chemistry Support Bridget Stein University of Swansea UK
Selected Users - TriVersa NanoMateApplication Name Facility CountryApplication Name Facility Country
Metabolite Identification Jose Castro Perez Merck USA
Metabolite Identification Josh Rowe Allergan USA
Metabolite Identification Glen Dillow Alcon USA
Metabolite Identification Johnathan Josephs Bristol Myers Squib USA
Metabolite Identification Gary Bowers GSK USA
Metabolite Identification Gerard Hopfgartner University of Geneva Switzerland
Metabolomics Olaf Boernsen Novartis Switzerland
Metabolomics Thomas Hankemeier University of Leiden UK
Metabolomics Mark Viant University of Birmingham UK
Metabolomics Paul Skip University of Southampton UK
Plant Metabolomics Chris Vlahakis Pioneer USA
Plant Metabolomics Tim Snow DuPont USA
Plant Metabolomics Patrick Giavalisco MPI Golm Germany
Antibody IGG Anne Zeck Roche Penzberg Germany
Antibody IGG Joerg Thomas Regula Roche Penzberg GermanyAntibody IGG Joerg Thomas Regula Roche Penzberg Germany
Antibody IGG Amgen Colorado Steve Cockrill USA
Antibody IGG Amgen Seattle Allain Balland USA
LESA
Tissue Analysis Gary Van Berkel Oak Ridge National Laboratory USA
Software Control enables integration with external multiple plate fraction collection and radiochemical detection
This flow can be directed to an online flow scintillation detector or multiplate 96 well fractionscintillation detector or multiplate 96-well fraction collector for radioactive measurements on dried fractions.(Data exchange via External Collector Synchronization Software:Integration with external multiple plate fraction collection and radiochemical detection.) These fractions can be used for in-depth MS
analysis of metabolites (optionally) identifiedanalysis of metabolites (optionally) identified by radioactive detection.
Automated Shotgun Lipidomics
2-Step Lipid Extraction
Optimized Solvent Systems
“Settings of the ion source (NanoMate HD) must allow stable and reproducible spray with the flow injection rate of 200-300 nL/min.” (Ejsing et al 2006 Anal Chem 78 6202 14 )
Overview of the quantitative shotgun lipidomics approach. Yeast cell lysates were spiked with internal lipid standards. Samples were processed by 2-step lipid extraction for fractionation of apolarand polar lipids. The lipid extracts were analyzed by automated shotgun lipidomics analysis in negative and positive ion mode. Lipid species were detected by MPIS or MRM analysis on a QSTAR i b FT MS l i LTQ O bi hi Q ifi i f l hi d b h i l l i f ll d b MRM l i Id ifi i d ifi i f
Absolute Quantification (Ejsing et al. 2006, Anal Chem 78, 6202-14.)
Reference:Ejsing CS, Sampaio JL, Surendranath V, Duchoslav E, Ekroos K, Klemm RW, Simons, Shevchenko A (2009): Global analysis of the yeast lipidome by quantitative shotgun
Laboratory:Dr. Andrej ShevchenkoMPI Mol Cell Biol & GeneticsDresden
instrument, or by FT MS analysis on a LTQ Orbitrap machine. Quantification of ergosterol was achieved by chemical acetylation followed by MRM analysis. Identification and quantification of detected lipid species were performed by Lipid Profiler and ALEX.
Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry. PNAS 106 (7), 2136-2141.
DresdenGermany
Automated Shotgun Lipidomics – human plasma
“Top-down shotgun lipidomics demonstrated h h t i i i d b
Plasma lipidome of 19 men with hypertension and 51 normotensive male controls was screened by top-down shotgun profiling on a LTQ Orbitrap hybrid mass spectrometer. The analysis encompassed 95 lipid species of 10 major lipid classes.
that hypertension is accompanied by specific reduction of the content of ether lipids and free cholesterol that occurred independently of lipidomic alterations induced by obesity and insulin resistance.”
“These results may form the basisThese results may form the basis for novel preventive and dietary strategies alleviating the severity of hypertension.“
Reference:Graessler J, Schwudke D, Schwarz PEH, Herzog R, Shevchenko A, Bornstein SR (2009): Top-down lipidomicsreveals ether lipid deficiency in blood plasma of hypertensive
Laboratory:Dr. Andrej ShevchenkoMPI Mol Cell Biol & GeneticsDresdenreveals ether lipid deficiency in blood plasma of hypertensive
patients. Plos One 4 (7), e6261.DresdenGermany
Plant MetobolismUPLC-FTICR-MS coupling via TriVersa NanoMateProblem with the Integration of the UPLC:UPLC produces narrow peaks with a width of 3-6 seconds, BUT the scanning rate of the FT-ICR MS is quiet low (~1 second per scan @ R100000)
Source: Bettina Seiwert, DGMS, Konstanz, 2009, Advion Lunch Seminar.
Reference:Giavalisco P, Köhl K, Hummel J, Seiwert B, Willmitzer L (2009): 13C Isotope-labeled metabolomes allowing for improved compound annotation and relative quantification in liquid chromatography-mass spectrometry-based metabolomic
Laboratory:Prof. Dr. Lothar WillmitzerMPI Molecular Plant PhysiologyPotsdam-Golmq q g p y p y
research. Anal. Chem. 81 (15), 6546-6551.Potsdam GolmGermany
MetabolomicsUPLC-FTICR-MS coupling via TriVersa NanoMateSince highly sensitive on-line coupling of UPLC with FTICR-MS is technically infeasible due to their different scan rates, at-line coupling of these techniques was developed for rapid analysis.
“Good reproducibility and high recovery was observed.”
“M li bl i t“More reliable assignments were achieved by use of at-line coupling of UPLC and FTICR-MS compared with off-line pmeasurements.”
Reference:Li X, Fekete A, Englmann M, Frommberger M, Lv S, Chen G, Schmitt-Kopplin P (2007): At-line coupling of UPLC to chip-electrospray-FTICR-MS Anal Bioanal Chem 389
Laboratory:PD Dr. Phillippe Schmitt-KopplinInstitute for Ecological ChemistryNeuherberg/Münchenchip-electrospray-FTICR-MS. Anal. Bioanal. Chem. 389,
1439–1446.Neuherberg/MünchenGermany