SysteMicrobiology Badry Revision

Embed Size (px)

Citation preview

  • 7/28/2019 SysteMicrobiology Badry Revision

    1/141

    Systematic Microbiology Revision

    Supervised by

    :

    Prof. Dr. Mohamed SherifBy:

    Mohamed El-Badry

    Mahmoud El-Mahallawy

  • 7/28/2019 SysteMicrobiology Badry Revision

    2/141

    Medical Microbiology

    Microorganisms

    Bacteria Fungi Viruses

    Cocci Bacilli Spirals DNA viruses RNA viruses

  • 7/28/2019 SysteMicrobiology Badry Revision

    3/141

    Cocci

    Gram +ve Gram -ve

    Neisseria

    Bunches Chains Diplo Diplo

    Staphylococci Streptococci Pneumococci

  • 7/28/2019 SysteMicrobiology Badry Revision

    4/141

    S. aureusmorphology

  • 7/28/2019 SysteMicrobiology Badry Revision

    5/141

    Staphylococci

    Definition

    Gram-positive cocci arranged in bunches, non motile, non spore -forming

  • 7/28/2019 SysteMicrobiology Badry Revision

    6/141

    Classification of Staphylococci

    Classified according to the color of the colonies into :

    Staphylococcus

    saprophyt icus (Ci trus)

    Staphylococcus

    epidermidis (albus )

    Staphylococcus

    aureus

    Golden Yellow Colonies White Colonies Lemon Yellow Pigment

  • 7/28/2019 SysteMicrobiology Badry Revision

    7/141

    2. Direct Microscopic examination (Direct Film): Gram

    positive cocci arranged in bunches, non motile, non-sporeforming among pus.

  • 7/28/2019 SysteMicrobiology Badry Revision

    8/141

    b. Effect of colonies on Blood Agar:

    Colony

    Complete Zone of

    haemolysis (-

    hemolysis) around

    colony due to production

    of haemolysin

    S. aureus produce haemolysin that destroy RBCs in blood agar medium

  • 7/28/2019 SysteMicrobiology Badry Revision

    9/141

    Indirect film (Film from culture)

    Gram-positive cocci arranged in bunches from culture

  • 7/28/2019 SysteMicrobiology Badry Revision

    10/141

    Biochemical Reactions:

    Coagulase production:

    Tube Method: to detect soluble coagulase

    Slide Method: to detect bound coagualse

    Coagulase-positive Staphylococci:

    Staphylococcus aureus

    Coagulase-negative Staphylococci:

    S. epidermidis

    S. saprophyticus

  • 7/28/2019 SysteMicrobiology Badry Revision

    11/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    12/141

    12

    Cutaneous lesions of S. aureus

  • 7/28/2019 SysteMicrobiology Badry Revision

    13/141

    Staphylococcal osteomyelitis in a long bone

    13

  • 7/28/2019 SysteMicrobiology Badry Revision

    14/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    15/141

    Stye

  • 7/28/2019 SysteMicrobiology Badry Revision

    16/141

    Impetigo

  • 7/28/2019 SysteMicrobiology Badry Revision

    17/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    18/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    19/141

    scalded skin syndrome

  • 7/28/2019 SysteMicrobiology Badry Revision

    20/141

    Toxic shock syndrome

  • 7/28/2019 SysteMicrobiology Badry Revision

    21/141

    Toxic shock syndrome

  • 7/28/2019 SysteMicrobiology Badry Revision

    22/141

    SSSTSS

  • 7/28/2019 SysteMicrobiology Badry Revision

    23/141

    TSS SSS TSS

  • 7/28/2019 SysteMicrobiology Badry Revision

    24/141

    1 normal

    microflora

    2impetigo

    11 respiratory infections

    8 meningitis

    3 furuncle, carbuncle

    4 wound inf., abscesses

    5 spread via lymphatic

    and blood ways

    6 osteomyelitis

    7 endocarditis

    10nephritis

    9 enteritisfood poisoning

  • 7/28/2019 SysteMicrobiology Badry Revision

    25/141

    Streptococci

    DefinitionGram-positive cocci arranged in chains, non motile, non spore-forming

    Sometimes capsulated (Strept. Pneumoniae)

  • 7/28/2019 SysteMicrobiology Badry Revision

    26/141

    Classification

    Streptococci

    Aerobic Anaerobic

    Peptostreptococcus-hemolytic -hemolytic Non-hemolytic

    St. viridans St. pyogenes St. faecalis

    (Enterococcus

    faecalisSt. pneumoniae

  • 7/28/2019 SysteMicrobiology Badry Revision

    27/141

    Freshly isolated Streptococcus

    27

  • 7/28/2019 SysteMicrobiology Badry Revision

    28/141

    Streptococcus pneumoniae

  • 7/28/2019 SysteMicrobiology Badry Revision

    29/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    30/141

    - Haemolytic Streptococci

    Viridans Streptococci Streptococcus pneumoniae

    Diseases

  • 7/28/2019 SysteMicrobiology Badry Revision

    31/141

    Diagnosis of Sub Acute Bacterial Endocarditis

    Incubate

    37 oC,

    24 h.

    Sub

    Cu

    lture

    Blood Culture

  • 7/28/2019 SysteMicrobiology Badry Revision

    32/141

    -hemolytic streptococci Group A Lancifield

  • 7/28/2019 SysteMicrobiology Badry Revision

    33/141

    Direct microscopic examination

    showing Gram positive cocci,

    arranged in chains among pus

    Indirect microscopic examination

    showing Gram positive cocci,

    arranged in chains from culture

    Treatment (The drug of Choice)

    Penicillin

  • 7/28/2019 SysteMicrobiology Badry Revision

    34/141

    Acute follicular tonsillitis

    Scarlet FeverNote the strawberry tongue of

    scarlet fever

    Impetigo

    Erysipelas

  • 7/28/2019 SysteMicrobiology Badry Revision

    35/141

    35

    Erysipelas

  • 7/28/2019 SysteMicrobiology Badry Revision

    36/141

    36

  • 7/28/2019 SysteMicrobiology Badry Revision

    37/141

    Acute follicular tonsillitis

    37

  • 7/28/2019 SysteMicrobiology Badry Revision

    38/141

    Scarlet fever

  • 7/28/2019 SysteMicrobiology Badry Revision

    39/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    40/141

    Neisseria

  • 7/28/2019 SysteMicrobiology Badry Revision

    41/141

    Acute gonorrheal male - showing urethral discharge

    Neisseria gonorrhea

  • 7/28/2019 SysteMicrobiology Badry Revision

    42/141

    N. gonorrhoeae N. meningitides

    Direct Examination (Stained smear) will show:

    Gram-negative kidney-shaped diplococci, Intracellular and extracellular

  • 7/28/2019 SysteMicrobiology Badry Revision

    43/141

    Ophthalmia neonatorumNon venereal gonococcal infection

    Neisseria gonorrhea

  • 7/28/2019 SysteMicrobiology Badry Revision

    44/141

    meningo coccus

    44

    Neisseria Meningitidis

  • 7/28/2019 SysteMicrobiology Badry Revision

    45/141

    Lumbar Puncture

  • 7/28/2019 SysteMicrobiology Badry Revision

    46/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    47/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    48/141

    Gram Positive Bacilli

    Aerobic Anaerobic

    Spore-forming Non-spore forming

    Bacillus Corynebacterium

    Spore-forming

    Clostridium

    Anthracis

    Anthracoid

    diphtheriae

    diphtheroid

    botulinum

    Perfringens

    tetani

  • 7/28/2019 SysteMicrobiology Badry Revision

    49/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    50/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    51/141

    Pneumonic Anthrax

    Wool sorters disease

    Cutaneous Anthrax

    Malignant Pustule

  • 7/28/2019 SysteMicrobiology Badry Revision

    52/141

    Corynebacterium

    Definition

    Aerobic, non spore forming, Gram-positive bacilli arranged in chinese letters

  • 7/28/2019 SysteMicrobiology Badry Revision

    53/141

    Diphtheria

  • 7/28/2019 SysteMicrobiology Badry Revision

    54/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    55/141

    Metachromatic

    granules

  • 7/28/2019 SysteMicrobiology Badry Revision

    56/141

    Lofflers serum Blood Tellurite

  • 7/28/2019 SysteMicrobiology Badry Revision

    57/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    58/141

    Clostridium

    Definition

    Anaerobic, Gram-positive spore-forming bacilli

    Spore

  • 7/28/2019 SysteMicrobiology Badry Revision

    59/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    60/141

    Clostridium tetani

  • 7/28/2019 SysteMicrobiology Badry Revision

    61/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    62/141

    Tetanic neonatorum

  • 7/28/2019 SysteMicrobiology Badry Revision

    63/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    64/141

    Treatment of Tetanus

    Antitoxic serum Penicillin

  • 7/28/2019 SysteMicrobiology Badry Revision

    65/141

    Immunization

    (Diphtheria, Pertussis, Tetanus)

  • 7/28/2019 SysteMicrobiology Badry Revision

    66/141

    A film of Cl. tetani stained by Gram showing characteristic durm-stick

    appearance due to terminal spherical spores

    Microscopic Examination

  • 7/28/2019 SysteMicrobiology Badry Revision

    67/141

    Culture

    Anaerobic culture (using

    anaerobic gas pak jar)

    on blood agar

    Anaerobic culture

    (using anaerobic medium)

    on Robertson Cooked meet

  • 7/28/2019 SysteMicrobiology Badry Revision

    68/141

    Clostridium causing gas gangrene

    Saccharolytic Proteolytic

    C. perfringens (welchii) C. sporegenes

  • 7/28/2019 SysteMicrobiology Badry Revision

    69/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    70/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    71/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    72/141

    Culture

    Anaerobic culture

    (using anaerobic medium)

    on Robertson Cooked meet

  • 7/28/2019 SysteMicrobiology Badry Revision

    73/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    74/141

    Treatment of Gas Gangrene

    1. Removal of necrotic tissues or even amputation

    2. Antitoxic serum

    3. Penicillin or clindamycin

    4. Washing with H2O2

  • 7/28/2019 SysteMicrobiology Badry Revision

    75/141

    Mycobacterium

    (Acid-Fast Bacilli)

    The Cell wall is rich in lipid (mycolic acid) making the cell wall resistant to:

    Disinfectants

    StainsGrams Stain

    Decolorization by acids thus they are termed acid fast bacilli

    Mycobacterium

    Tuberclosis

    Tubercle Bacilli

    (T.B.)

    saprophyticusLeprae

  • 7/28/2019 SysteMicrobiology Badry Revision

    76/141

    A Sputum film stained by Ziehl-Nellsen stain showing the

    tubercle bacili as pink rods in a blue background.

    Mycobacter ium tuberclosis (T.B )

  • 7/28/2019 SysteMicrobiology Badry Revision

    77/141

    Lowenstein Jensen media

  • 7/28/2019 SysteMicrobiology Badry Revision

    78/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    79/141

    Treatment

    PASA

    Ethambutol

    Streptomycin

    INH

    Remactan

    cycloserine

    Immunization

    BCG

  • 7/28/2019 SysteMicrobiology Badry Revision

    80/141

    Mycobacterium leprae

    Ziehl nellsen Modified Ziehl nellsen

    T.B.

  • 7/28/2019 SysteMicrobiology Badry Revision

    81/141

    Mycobacterium leprea

    LeprosyLLTT

  • 7/28/2019 SysteMicrobiology Badry Revision

    82/141

    82

  • 7/28/2019 SysteMicrobiology Badry Revision

    83/141

    Treatment

    Dapson (Sulfa)

  • 7/28/2019 SysteMicrobiology Badry Revision

    84/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    85/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    86/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    87/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    88/141

    www.orl.cz/choroby/ustni/jazyk/zanet/1

  • 7/28/2019 SysteMicrobiology Badry Revision

    89/141

    Treponema pall idum

    Narrow coils

  • 7/28/2019 SysteMicrobiology Badry Revision

    90/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    91/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    92/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    93/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    94/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    95/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    96/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    97/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    98/141

    Secondary Syphilis

    Skin Rash Condylomata lata

  • 7/28/2019 SysteMicrobiology Badry Revision

    99/141

    Tertiary syphilis

  • 7/28/2019 SysteMicrobiology Badry Revision

    100/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    101/141

    Treponema pertenue

    Yaws

    Non venereal skin infection

  • 7/28/2019 SysteMicrobiology Badry Revision

    102/141

    Borrelia spp.

  • 7/28/2019 SysteMicrobiology Badry Revision

    103/141

    Giemsa Stain of Borrelia Gram Stain of Borrelia

  • 7/28/2019 SysteMicrobiology Badry Revision

    104/141

    Vincents Angina

  • 7/28/2019 SysteMicrobiology Badry Revision

    105/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    106/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    107/141

    Cultivation of Viruses

    Figure 13.7

    Chick embryo

  • 7/28/2019 SysteMicrobiology Badry Revision

    108/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    109/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    110/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    111/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    112/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    113/141

    Herpangina caused by coxackie virus

  • 7/28/2019 SysteMicrobiology Badry Revision

    114/141

    Jaundice casued by Hepatitis A virus

  • 7/28/2019 SysteMicrobiology Badry Revision

    115/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    116/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    117/141

    Influenza

    Spread by droplet

  • 7/28/2019 SysteMicrobiology Badry Revision

    118/141

    Point mutation of HA and NAgenes

    ANTIGENIC DRIFT

    ANTIGENIC SHIFT

    Genetic Reassortment

    Human H3N2

    Avian H3N8

    Human H2N2Generation of Novel Influenza A Viruses

  • 7/28/2019 SysteMicrobiology Badry Revision

    119/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    120/141

    d h l

  • 7/28/2019 SysteMicrobiology Badry Revision

    121/141

    Treatment and Prophylaxis

    Tam fluAmantadine

  • 7/28/2019 SysteMicrobiology Badry Revision

    122/141

    k lik d b M l i

  • 7/28/2019 SysteMicrobiology Badry Revision

    123/141

    kopliks spots caused by Measles virus

  • 7/28/2019 SysteMicrobiology Badry Revision

    124/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    125/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    126/141

    S t f HIV i f ti

  • 7/28/2019 SysteMicrobiology Badry Revision

    127/141

    Symptoms of HIV infection

  • 7/28/2019 SysteMicrobiology Badry Revision

    128/141

    didi i

  • 7/28/2019 SysteMicrobiology Badry Revision

    129/141

    candidiasis

  • 7/28/2019 SysteMicrobiology Badry Revision

    130/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    131/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    132/141

    Herpes simplex type 1

  • 7/28/2019 SysteMicrobiology Badry Revision

    133/141

    Herpes simplex type 1

  • 7/28/2019 SysteMicrobiology Badry Revision

    134/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    135/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    136/141

    human papilloma virus

  • 7/28/2019 SysteMicrobiology Badry Revision

    137/141

    human papilloma virus

    Treatment

  • 7/28/2019 SysteMicrobiology Badry Revision

    138/141

    Treatment

    Epstein Barr virus

  • 7/28/2019 SysteMicrobiology Badry Revision

    139/141

    Epstein Barr virus

    Burkitt's lymphoma

  • 7/28/2019 SysteMicrobiology Badry Revision

    140/141

  • 7/28/2019 SysteMicrobiology Badry Revision

    141/141