Upload
others
View
0
Download
0
Embed Size (px)
Citation preview
Activity Report Department of Physics, Chemistry and Biology
January - December 2012
Index
IntRoductIon ............................................................. 3
oRganIzatIon .............................................................4Financial Summary ......................................................6Personnel Situation ..................................................... 7New Professors ........................................................... 8The Environment .........................................................9Equal Opportunities .................................................. 10The Third University Task ........................................... 11
undeRgRaduate educatIon .....................................12Physics .........................................................................12Biology .........................................................................13Chemistry ................................................................... 14Physics – Measurement Technology ........................ 16International Master’s Programmes .........................17
gRaduate educatIon .................................................18Forum Scientium ........................................................18Agora Materiae ...........................................................18IFM Graduate Programme ....................................... 19
ScIentIfIc bRanch of applIed phySIcS ....................21Applied Optics ........................................................... 23Applied Physics ..........................................................24Biomolecular and Organic Electronics ..................... 25Biosensors and Bioelectronics ..................................26Biotechnology ............................................................. 30Molecular Physics .......................................................31Regenerative Medicine ...............................................33Molecular Surface Physics and Nano Science ......... 34Applied Sensor Science ............................................. 36Surface Physics and Chemistry ................................. 38
ScIentIfIc bRanch of bIology ................................40AVIAN Behavioral Genomics and Physiology .......... 41Conservation Ecology Group ....................................42Plant Evolution and Domestication Group ............. 43The Sensory and Behavioral Physiology Group .......44
ScIentIfIc bRanch of chemIStRy ................................46Molecular Biotechnology ...............................................47Organic Chemistry .........................................................48Physical Chemistry .........................................................49Inorganic Chemistry.......................................................50Analytical Chemistry ......................................................50
ScIentIfIc bRanch of mateRIal phySIcS ..................... 52Functional Electronic Materials ..................................... 53Nanostructured Materials ............................................. 54Plasma & Coatings Physics ........................................... 56Semiconductor Materials .............................................. 59Surface and Semiconductor Physics.............................63Thin Film Physics ...........................................................65
ScIentIfIc bRanch of theoRy and modelIng ......... 69Bioinformatics ................................................................70Computational Physics .................................................. 71Theoretical Biology.........................................................72Theoretical Physics ........................................................ 73
ReSeaRch centeRS .........................................................76AFM ................................................................................76CeNano ........................................................................... 77FunMat ...........................................................................78LiLi-NFM .........................................................................80LBB ................................................................................. 85SIMARC ..........................................................................86
publIcatIonS .................................................................88
theSeS .......................................................................... 110Doctoral Theses ........................................................... 110Licentiate Theses.......................................................... 110Undergraduate Theses ................................................. 111
IFM actIvIty report 2012 3
The Department of Physics, Chemistry and Biology (IFM) hereby presents its 42nd consecutive progress report since the start in 1970. The report contains a description of activities in research and educa-tion within the department and is intended as a source of informa-tion for colleagues and other interested readers.
IFM Is organIzed In FIve scIentIFIc areas• AppliedPhysics• Biology• Chemistry• MaterialPhysics• TheoryandModelling.
AlargepartoftheresearchwithinthesedivisionsismadepossiblebygenerousgrantsfromfoundingagencieslikeTheSwedishResearchCouncil(VR),TheSwedishFoundationforStrategicResearch(SSF),VINNOVA,Formas,TheKnutandAliceWallenbergFoundationandinternationallyalsothroughtheEuropeanResearchCouncilandtheFP7frameworkpro-gramme.
Duringtheyear2012,arecordhighof29doctoraland19licentiatetheseswerepresented.Morethan230undergraduatecourseswerepresentedinMasterofScienceinEngineeringprogrammes,inMasterofScienceprogrammes,inBachelorofScienceinEngineeringprogrammes,andinteachertrainingprogrammes.
Theimageonthecovershowsamirror-reflectedexperimentalValenceElectronEnergyLossSpectrumlinescanobtainedacrossanAl1-xInxNmultilayerstructuregrownonAl2O3.Thespectrumintensityisrepresentedbyacolorscaleandeachhorizontallinecorrespondstoalocalelectronenergylossspec-trumintherange15to25eV.ThecentrallayercorrespondstoAl2O3anditissurroundedbyAl1-xInxNlayerswithstep-wiseincreasingIn-concentrationMoredetailsofourresearch,graduateandundergraduatepro-grammescanbefoundatwww.ifm.liu.se.
Pleasealsofeelfreetocontactusbymail,e-mailortelephone.
göran Hansson,Professor Head of Department
IFM– tHe departMent oF pHysIcs,cHeMIstry and bIology
4 IFM actIvIty report 2012
OrganizationadMInIstratIon Head of Department GöranHanssonDeputy Heads MagdalenaSvensson PerJensenFinancial Administrator IngerJohanssonPersonnel Administrator LouiseGustafssonRydströmPrincipal Research Engineer BengtAndersson departMent board Members deputy MembersGöranHansson,ChairpersonIgorAbrikosov,Teacher representatives KarinSundblad-TonderskiKennethJärrendahl KarinEnanderPeterNilsson MagnusOdénJohannaRosén ElkeSchwedaUnoWennergrenSusanneAndersson,Techn/adm. representatives JeanetteNilssonMattiasTengdelius,PhD stud. representatives LeifJohanssonMartinEriksson MonicaMalmbeckerEdstamPatrikÅkesson,Student representatives MatsWermePatrikHallsjö IngegärdAndersson,SecretaryLenaMartinsson
Central department functions
Research and Education
Theory and ModelingBioinformatics, Computational Physics,Theoretical Biology, Theoretical Physics
Material PhysicsFunctional Electronic Materials, Nanostructured
Materials, Plasma and Coatings Physics, Semiconductor Materias, Thin Film Physics
ChemistryInorganic Chemistry, Molecular biotechnology,
Organic Analytical Chemistry, Organic Chemistry,Physical Chemistry, Protein Chemistry
BiologyEcology, Molecular genetics, Zoology
Applied PhysicsApplied Optics, Applied Physics, Biomolecular and Organic Electronics, Biosensors and Bioelectronics,
Biotechnology, Molecular Surface Physics & Nanoscience, Applied Sensor Science,
Molecular Physics, Surface Physics and Chemistry
Department board
Personnel
Scientific areasDivisions
Study Programmes Research Centra
Economy Technical Computer support
LSG, Local co-operation group
Head of Department
AFM
Biosensors and Bioelectronics Centre
CeNano
FunMat
LiLi-NFM
SIMARC
Central department functions
Research and Education
Theory and ModelingBioinformatics, Computational Physics,Theoretical Biology, Theoretical Physics
Material PhysicsFunctional Electronic Materials, Nanostructured
Materials, Plasma and Coatings Physics, Semiconductor Materias, Thin Film Physics
ChemistryInorganic Chemistry, Molecular biotechnology,
Organic Analytical Chemistry, Organic Chemistry,Physical Chemistry, Protein Chemistry
BiologyEcology, Molecular genetics, Zoology
Applied PhysicsApplied Optics, Applied Physics, Biomolecular and Organic Electronics, Biosensors and Bioelectronics,
Biotechnology, Molecular Surface Physics & Nanoscience, Applied Sensor Science,
Molecular Physics, Surface Physics and Chemistry
Department board
Personnel
Scientific areasDivisions
Study Programmes Research Centra
Economy Technical Computer support
LSG, Local co-operation group
Head of Department
AFM
Biosensors and Bioelectronics Centre
CeNano
FunMat
LiLi-NFM
SIMARC
Or
ga
niz
at
iOn
IFM actIvIty report 2012 5
Undergraduate teachingarea dIrector oF stUdIes
Biology AgnetaJohanssonChemistry StefanSvenssonMeasurementTechnology RagnarErlandssonPhysics-engineeringprograms LeifJohansson/MagnusJohanssonPhysics-naturalscience MagnusBoman
InternatIonal Master´s prograMMes
AppliedEthologyandBiology, AgnetaJohanssonMolecularGeneticsandPhysiology, AgnetaJohanssonEcologyandTheEnvironment AgnetaJohanssonMaterialsPhysicsandNanotechnology LeifJohansson/MagnusJohansson
gradUate teacHIngIFMGraduateProgramme Per-OlofHoltzForumScientium StefanKlintströmAgoraMateriae Per-OlofHoltz
researcH dIvIsIons scIentIFIc brancH oF applIed pHysIcs
AppliedOptics HansArwin,prof.AppliedPhysics StefanKlintström,Dr.,chairpersonAppliedSensorScience AnnitaLloyd-Spetz,prof.BiomolecularandOrganicElectronics OlleInganäs,prof. BiosensorandBioelectronics AnthonyTurner,prof.Biotechnology Carl-FredrikMandenius,prof.MolecularSurfacePhysicsandNanoscience KajsaUvdal,prof.MolecularPhysics BoLiedberg,prof. /ThomasEderth,assoc.prof.,actingheadofdivisionSurfacePhysicsandChemistry MatsFahlman,prof.
scIentIFIc brancH oF bIology PerJensen,prof.,chairpersonEcology PerMilberg,prof. Moleculargenetics JohanEdqvist,assoc.prof.Zoology JordiAltimiras,assoc.prof.
scIentIFIc brancH oF cHeMIstry
Biochemistry UnoCarlsson,prof.InorganicChemistry Per-OlovKäll,prof.MolecularBiotechnology BengtHaraldJonsson,prof.,chairpersonOrganicAnalyticalChemistry RogerSävenhed,assoc.prof.OrganicChemistry PeterKonradsson,prof.PhysicalChemistry LarsOjamäe,prof.ProteinChemistry PerHammarström,prof.
scIentIFIc brancH oF MaterIal pHysIcs
FunctionalElectronicMaterials WeiminChen,prof.NanostructuredMaterials MagnusOdén,prof.Plasma&CoatingsPhysics UlfHelmersson,prof.SemiconductorMaterials ErikJanzén,prof.,deputychairpersonSurfaceandSemiconductorPhysics RogerUhrberg,prof.ThinFilmPhysics LarsHultman,prof.,chairperson
scIentIFIc brancH oF tHeory and ModellIng
Bioinformatics BengtPersson,prof.ComputationalPhysics SvenStafström,prof.TheoreticalBiology BoEbenman,prof.TheoreticalPhysics IgorAbrikosov,prof.,chairperson
Or
ga
niz
at
iOn
6 IFM actIvIty report 2012
Financial summaryoperatIng IncoMe (aMoUnts In MseK) 2012 2011
University allocations for teaching 87 95 University allocations for research 168 154 External sources of income 193 170
total 448 420 operatIng expenses (aMoUnts In MseK) Expences for staff 237 222Expences for premises 69 62Other operating expenses 116 106Depreciation 26 17total 448 407 change in capital for the year 1 13 Balanced capital January 65 56Balanced capital December 66 69
external soUrces oF IncoMe 2012 (aMoUnts In MseK) 2012 2011 Swedish Research Council, VR 54 57 Other Research-funding agencies, e.g. Vinnova, Formas 18 19 Research foundations, e.g. SSF 20 22 Other private foundations, e.g. Wallenberg 30 15 Funding from the European Union 32 22 Other sources of funding 26 30 Contract research 14 5
total 193 170
University allocations for teaching
University allocations for research
external sources of income
distribution of income sources, IFM, 2012
external sources of income, IFM, 2012
Or
ga
niz
at
iOn
15% 10%
9%
28%
7%
14%
17%
IFM actIvIty report 2012 7
personnel situation 2012IFM staFF JUne 2012 Position Men Women TotalProfessors 46 9 55Adj Professors 4 0 4Guest Professors 6 0 6Senior Lecturers 42 18 60Adj Lectures 2 1 3Assistant Lecturers 2 3 5Researchers 3 0 3Assistant Professors 22 6 28Postdoctors 40 15 55Other researchers 27 9 36PhD students 81 48 129Administrators 3 24 27Engineers 21 4 25Coordinator/Environm. 0 1 1total 299 138 437
new eMployMents dUrIng 2012 Personnel category Men Women TotalSenior Lecturers 1 1 2Postdoctors 8 1 9Other researchers 5 1 6PhD students 7 0 7Administrators 0 1 1Total 21 4 25
During 2012, 25 persons began their employment at the department.
46
94 6
42
18
2 1 2 3 3
22
6
40
15
27
9
3
24
48
81
21
41
Prof
esso
rs
Adj P
rofe
ssor
s
Gue
st P
rofe
ssor
s
Seni
or L
ectu
rers
Adj L
ectu
res
Assi
stan
t Lec
ture
rs
Rese
arch
ers
Assi
stan
t Pro
fess
ors
Post
doct
ors
Oth
er re
sear
cher
s
PhD
stu
dent
s
Adm
inis
trat
ors
Engi
neer
s
Coor
dina
tor
Or
ga
niz
at
iOn
8 IFM actIvIty report 2012
new professors 2012
ngUyen tIen son, professorinSemiconductorMaterials,receivedhisPhDinsolidstatephysicsattheDepartmentofPhysicsandAstronomy,UniversityofAmsterdamin1993. Afterthatheworkedasapostdoctoralfellow(1993-1997)atthedivisionofSemiconductorMaterials,IFM,LinköpingUniversity.Hebecamedocent(1999)andassociateprofessor(2003)inmaterialsscienceatIFM. Hisresearchcoversfromthefundamentalpropertiesofsemiconductorstothephysicsofdefectsandtheinfluenceofdefectsonthematerialproperties.Thematerialsofinterestin-cludebulkSi,SiC,GaN,AlN,andZnOaswellasthethin-filmstructuresofIII-nitridealloys.Intheresearch,differentoptical,electricalandmagneticexperimentaltechniques,suchaspho-toluminescence,deepleveltransientspectroscopy,magneticandcyclotronresonance,havebeenemployed. HiscurrentresearchinterestsfocusondefectphysicsanddefectengineeringinSiCandIII-nitrides(GaN,AlGaNandAlN)tosolvematerialproblemsfortheirapplicationsinhigh-powerandhigh-frequencyelectronicsanddeep-ultravioletlight-emittingdevices.
sergeI sIMaK DoctorofPhysicalandMathematicalSciences(2000)atNationalUniversityofScienceandTechnology(MI-SiS),Moscow,Russia.ForskarassistentatTheDepartmentofAppliedPhysics,ChalmersUniversityofTechnologyandGöte-borgUniversity,Gothenburg,Sweden2000-2002,ForskareatTheDepartmentofPhysics,UppsalaUniversity,Sweden(2002-2004),UniversitylectureratIFM,LinköpingUniversitysince2004. Sergei’sresearchisfocusedonstudiesofphysicalproper-tiesofmaterialsbasedonfundamentallawsofNature,firstofalltheprinciplesofQuantumMechanics.Whathedoes,canbedescribedas“theoreticalexperiments”employingmodernsupercomputersinsteadofstandardexperimentalequipment.Hedevelopsnewmethodswhichallowonetocalculateandpredictphysicalpropertiesofsolidmaterialsatgivenexternalconditions,suchas,forexample,pressure,temperatureandcomposition.Inparticular,heisdeeplyinvolvedinstudiesof
Or
ga
niz
at
iOn
theEarth’scoreandsuperhardmaterials.Theresultsofhisresearcharepresentedinmanypublications,inparticularinhigh-impactjournalsScience,ThePhysicalReviewLettersandProceedingsoftheNationalAcademyofScienceoftheUSA(PNAS). Sergei’smaincurrentinterestisinthematerialsforfuelcells,i.e.thepossiblefuturesourcesof“green”energywhichdonotpollutetheenvironment.Hisultimategoalistheoreticalmaterialsdesignoffuelcellswithoptimumproperties.Thisworkbroughtsubstantialattentionoftheinternationalscien-tificcommunity.Inparticular,Sergeigotapatentforthesolidoxidefuelcellelectrolyte,designedexclusivelyonthebasisofquantummechanicalcalculations.ExcellentpropertiesofthepredictedmaterialwerelaterconfirmedbyexperimentalistsinFloridaUniversity,USA. TheresultsofSergei’sresearchhavebeenmanytimesde-scribedinpopularformbydifferentscientificsources(likein“ACleanAirActAttheQuantumScale”byPhilSchewe,JamesRiordon,andBenStein,PhysicsNewsUpdate,Number607#1,October2,2002;“Thequantumoriginofoxygenstorage”,PhysicsUpdate,PhysicsToday,December2002;“Quantumoxygenstorage”byEdGerstner,NatureMaterialsUpdate,10October2002);bytheSwedishRadio(likethepresentationbytheSwedishRadioP1,2007-06-29);andbynewspapers(likeinN.Olauson,“Jordensinnerstahemlighetavslöjad”,Newspa-perÖstgötaCorrespondenten,2007-06-29;C.-J.Bilkenroth,“Svenskarförsttillmitten”,NewspaperSvenskaDagbladet2007-06-29;“Stärktteoriomjordenskärna”,DagensNyheternätupplagaDN.se,2007-06-29;“Nyarönomjordensinre”,NorrköpingsTidningarNT.se,2007-06-30). Sergei’sscientificinterestswouldbeincompletewithoutteaching.HeisateacheranddeveloperofundergraduateandPh.D.courses.Inparticular,hegivesregularcoursesinSolidStatePhysicsandRelativisticQuantumMechanicsatLinköpingUniversity.HisinternationalPhDcourses“Quan-tumSimulationofLiquidsandSolids”hostedbyCentreeuro-péendecalculatomiqueetmoléculaire(CECAM)weregreatsuccessandattractedyoungresearchersfromalloverEurope.Hehasalsobeenprincipalsupervisorof2Ph.Dstudents(bothreceivedthePh.D.degree),4M.Sc.Students,and2Post.Docs.
IFM actIvIty report 2012 9
Or
ga
niz
at
iOnthe environment
legIslatIonIFMhasaninjunction,accordingtotheSwedishEnvironmen-talCode,tosubmitayearlyreporttothelocalenvironmentalagencydescribingthelaboratoryworkatthedepartment.TheagencymakesregularinspectionsatIFM.
envIronMental ManageMent systeMs TheRectoratLiUdecidedin2006thatalldepartmentsmustworkaccordingtoanenvironmentalmanagementsystem.Since2009aregulationofenvironmentalmanagementforgovernmentagenciesstipulateshowtoperformtheenviron-mentalwork.In2010anenvironmentalenquirywasper-formedatLiUandresultedinseveralenvironmentaltargetareasandgoals. AtIFMaplanfortheenvironmentalworkwasfirstestab-lishedin2004andresultedinmeasurestakentowardsreach-inganenvironmentalmanagementsystem.Anenvironmentalplanfor2011-2012wasdecidedbytheIFMboardinMarch2011andconsistsofanactionplanwithenvironmentaltargetsandmeasuresneededtobetaken.Theenvironmentalworkhasbeenpresentedinthelocalco-operationgroupduringtheyear.
IFMs envIronMental targets 2011-2012Thetargetsareorganisedaccordingtothelong-termenviron-mentalareasadoptedbyLiUandIFMandaretobeaccom-plishedby2012-12-31.
lIMIt tHe contrIbUtIon to tHe clIMate cHanges1.DecreasetheenergyconsumptionofIT-equipmentbyin-stallingenergy-savingmodeandincreasingthenumberofswitchedoffequipment.Asystemforautomaticmeasurementsofthenumberofcomputersturnedonoroffwastobedevelopedandim-plementedduring2012,butunfortunatelyitprovedtobedifficulttofindamethodthatprovidedreliabledata.Wheninstallingcomputersinofficesetc,thecomputersupportgroupalwaysconfigurestoenergy-savemode.Themeasurestoachievethetargetwerepartlyfulfilled.
2.WorkshallbeperformedtotakethepreviouslydesignedmeasurestoreducetheenvironmentalimpactfromtravelmadebyIFM.InformationtotheIFMemployeesregardingtheguidelinesforenvironmentallyfriendlytravellingsetbyLiUisneededduring2013.During2012itbecamepossibletousetheLiU-cardwhentravellingwiththeCampusbus.Themeasurestoachievethetargetwerepartlyfulfilled.
lIMIt tHe contrIbUtIon to tHe clIMate cHanges/ eFFIcIent Use oF natUral resoUrces3.IFMshall,wheneverpossible,buycomputerswithgoodenvironmentalperformance(useofelectricityandcontentofhazardoussubstances)basedonthedemandsinprocure-mentsoflocal/publicframeworkagreements.IFMfollowstheavailableframeworkagreement.Themeas-urestoachievethetargetwerefulfilled.
eFFIcIent Use oF natUral resoUrces4.IFMshallsupplementthewastesortingsysteminaccord-ancewithdecisionsmadebyLiUregardingwastesorting.Thewastesortingsystemhasbeensupplementeddur-ing2011and2012;themeasurestoachievethetargetwerefulfilled.
MInIMal IMpact FroM Use oF HazardoUs or contagIoUs sUbstances5.IFMshallimplementfutureguidelinesforhandlingofhaz-ardouswasteandotherlaboratorywasteatLiU.IFMhasdecidedtooffersomeofthemostcommoncontain-ersforlaboratorywasteforfree.Informationregardingthisandthenewroutineforlaboratorywastehasbeensentbye-mailandpublishedattheIFMwebsite.Informationhasalsobeengivenatdifferentmeetingsduring2012.AtIFM,thelaboratorieshaveembracedthenewroutinestoalargeextent.Informationaboutthenewroutineforhandlinghaz-ardouswastewasgivenbye-mailandinformationatdiffer-entmeetings.TheroutinewaspublishedontheIFMwebsite.Themeasurestoachievethetargetwerepartlyfulfilled.
6.Riskassessmentsshallbemadebeforeallnewexperiments/laboratoryworkandwhenpurchasingnewequipment.Intheautumn2012LiUinitiatedworktoimproveinforma-tiononthewebsite,templatesetc.Whenthatworkiscom-pleted,spring2013,IFMemployeeswillreceiveinformationaboutriskassessment.Themeasurestoachievethetargetwerepartlyfulfilled.
organIzatIonal actIon7.AtIFMalllaboratorieswhereworkthatcanbeconsideredriskfultakesplace,musthaveanappointedpersonresponsi-bleforsupervisionofthelaboratory.Improvementisneededtomakesurepersonsresponsibleforsupervisionoflaboratorieshaveawrittendelegation.Informationwasgivenatdifferentmeetingsduring2012andtheworkwillcontinueduring2013.LaboratoriesatIFMhave,toalargeextent,anoticeoutsidetheentrancewithcontactinformation.Themeasurestoachievethetargetwerepartlyfulfilled.
10 IFM actIvIty report 2012
equal opportunities
IFMbelievesthatequalopportunityisimportantforbothstudentsandemployees.Theinstitutionhasthereforeassignedtheresponsibilityofequalopportunitytoagroupwiththefollowingmembers:LejlaKronbäck(administrativeperson-nel),AnnaSundin(administrativepersonnel),SimonaEles(technicalstaff),UlfFrykman(technicalstaff),GöranHansson(prefect),AgnetaJohansson(directorofstudies),UnoWenner-gren(professor),andLinnéaSelegård(PhDstudent).
Thegroupaimstomeetonceamonthtodiscussongoingprojectsandinitiatenewones.Theseprojectsareinsomewayrelatedtooneorseveralofthefivemainissuesthatwebuildourworkaround;genderequalityandgenderissues,ethnicityandreligionorotherbeliefsystems,disability,sexualorienta-tionandgenderidentityandvictimization,discriminationandharassmentatanindividuallevel.
InordertopreventdiscriminationandharassmentthegrouphasdrawnupanEqualOpportunityStrategy.Webelievethatthisstrategywillcontributetothefollowing:
• anattractivestudyandworkenvironment• developmentandcreativity• qualityineducationandresearch• equitablestructuresandprocesses
the equal opportunities vision• IFMaimstobeastudyandworkingenvironmentthatmakesfulluseoftheresourcescontributedtothedepartmentbystudentsandemployeeswithdifferentbackgrounds,lifesituationsandskills.• IFMseekstopromoteequalopportunitiesintheacademicworldandthecommunityatlarge.• Admissionandrecruitmentprocessesshouldbenon-dis-criminatory.• IFM’sstudyprogrammesshouldformallyofferequalop-portunitiesandbeaccessibleto,preparedforandconsiderateoftheneedsofvariousstudentcategories.• ThecontentofIFM’sstudyprogrammesshouldpromoteequalopportunitiesasfaraspossible.• Newstudentsshouldbereceivedinsuchawaythattheyallfeelwelcome.• Equalopportunitiesshouldprevailintermsofemployees´workingconditions,salaries,influence,careerprospectsandscopeforcombiningaprofessionalcareerwithresponsibilityforhomeandfamily.• IFMseekstomakeiteasierforemployeesandstudents,irrespectiveofgender,tocombinetheirstudieswithparentalresponsibilities.• IFMaimstobefreefromalldiscriminationandharassment.
projects we worked with during 2012Theequalopportunitygrouphasworkedwithseveralprojectsduring2012andlistedbelowaresomeoftheactionstakenbythegroup:
12 iFM Activity RepoRt 2010
oR
GA
NiZ
At
ioN
Equal Opportunities
IFMbelievesthatequalopportunityisimportantforbothstudentsandemployees.Theinstitutionhasthereforeassignedtheresponsibilityofequalopportunitytoagroupwiththefollowingmembers:AnetteAndersson(administrativestaff),UlfFrykman(technicalstaff),GöranHansson(prefect),AgnetaJohansson(directorofstudies),ParisaSehati(PhDstudent),LinnéaSelegård(PhDstudent)andKajsaUvdal(professor).
Thegroupmeetsonceamonthanddiscussongoingprojectsandinitiatenewones.Theseprojectsareinsomewayrelatedtooneorseveralofthefivemainissuesthatwebuildourworkaround;genderequalityandgenderissues,ethnicityandreligionorotherbeliefsystems,disability,sexualorienta-tionandgenderidentityandvictimization,discriminationandharassmentatanindividuallevel.
InordertopreventdiscriminationandharassmentthegrouphasdrawnupanEqualOpportunityStrategy.Webelievethatthisstrategywillcontributetothefollowing:
• anattractivestudyandworkenvironment• developmentandcreativity• qualityineducationandresearch• equitablestructuresandprocesses
The Equal Opportunities vision• IFMaimstobeastudyandworkingenvironmentthat
makesfulluseoftheresourcescontributedtothedepart-mentbystudentsandemployeeswithdifferentback-grounds,lifesituationsandskills.
• IFMseekstopromoteequalopportunitiesintheacademicworldandthecommunityatlarge.
• Admissionandrecruitmentprocessesshouldbenon-discriminatory.
• IFM’sstudyprogrammesshouldformallyofferequalopportunitiesandbeaccessibleto,preparedforandconsiderateoftheneedsofvariousstudentcategories.
• ThecontentofIFM’sstudyprogrammesshouldpromoteequalopportunitiesasfaraspossible.
• Newstudentsshouldbereceivedinsuchawaythattheyallfeelwelcome.
• Equalopportunitiesshouldprevailintermsofemployees´workingconditions,salaries,influence,careerprospectsandscopeforcombiningaprofessionalcareerwithrespon-sibilityforhomeandfamily.
• IFMseekstomakeiteasierforemployeesandstudents,ir-respectiveofgender,tocombinetheirstudieswithparentalresponsibilities.
• IFMaimstobefreefromalldiscriminationandharassment.
Projects we worked with during 2010Theequalopportunitygrouphasworkedwithseveralprojectsduring2010andlistedbelowaresomeoftheactionstakenbythegroup:
IFM,togetherwithtwootherinstitutions,arraignedaseminarthatfocusedonculturaldifferencesamongemployeesandstudentsandhowwecanbemoreawareofthesedifferences.
Ourwebsiteiscontinuouslybeingupdatedwithnewinformationaboutourwork.TherearelinkstotheuniversitycentralequalopportunitygroupwithrelatedinformationfoundinbothSwedishandEnglish.
Informationaboutupcomingeventssuchasseminars,lecturersandmeetingswascontinuouslysentouttoallem-ployees.
Thepersonneldepartmentensuredthattherewerenotanyunjustifieddifferencesinsalariesbetweenmenandwomen.
Wearetryingtoachieveadistributionaccordingtogenderthatiswithin40%–60%intheBoardofDirectorsandallotherworkinggroupsatIFM.
Wearecontinuouslytryingtoincreasethenumberoffemaleguestlecturersandourgoalistohavebothgenderswithinarangeof40%–60%.
Thisyearwefocusedonhighlightingculturaldifferencesinordertoincreasecommunicationbetweendifferentgroupsofpeopleandbydoingsotryingtoreducemisunderstandingsthateasilycanoccur.
Ourwebsiteiscontinuouslybeingupdatedwithnewinforma-tionaboutourwork.TherearelinkstotheuniversitycentralequalopportunitygroupwithrelatedinformationfoundinbothSwedishandEnglish. Thepersonneldepartmentensuredthattherewerenounjus-tifieddifferencesinsalariesbetweenmenandwomen. Wearetryingtoachieveadistributionaccordingtogenderthatiswithin40%-60%intheBoardofDirectorsandallotherworkinggroupsatIFM. Wearecontinuouslytryingtoincreasethenumberoffemaleguestlecturersandourgoalistohavebothgenderswithinarangeof40%-60%.
Or
ga
niz
at
iOn
IFM actIvIty report 2012 11
the third university task
school contacts Ourdepartmenthasalwaysbeenveryactiveindifferentformsofschoolcontacts.Forseveralyearswehavehadyoungresearchersparttimeemployedforexternalcontacts,oneeachfromphysics,chemistryandbiology.IFMisrepresentedintheboardforschoolcontactsofLiTH.Thegoalofthisboardistocoordinateandsupportexistingactivities,aswellasdevelopingnewexcitingactivities. Perhapsthemostfrequentactivityisvariousstudyvisitsbychildren,youngpeopleandteachers.InMaywehaveapopularactivitydirectedtosecondaryanduppersecondaryschoolteachers,theMayMingle,Majminglingen.Schoolteach-ersanduniversityteachersmeetinlecturesanddiscussions.ThisactivityisarrangedincooperationwiththeMathematicsdepartment.
popular science weekInOctoberweparticipatedinaPopularScienceweekforthegeneralpublic.ThiseventwasinitiatedbytheProfessorPerJensenin2005,andtheinterestisgrowing.ThesuccessoftheinitialPopularSciencedayhasledtoalargerthree-dayar-rangementincooperationwithotherdepartments,thePopularScienceweek.IFMparticipatedwithvariousexhibitionsandlectures.
open house daysLinköpingUniversityarrangeyearlytwoopenhousedaysforschoolteachersandpupils,andIFMparticipatedwithhands-onexhibitionsduringthesedays.
QuintekIFMreceivedaboutonehundredfemalehigh-schoolstudentswithintheQuintekprogram,aimedtopromotetheinterestforscienceandtechnologyamongtheyoungwomen.Atthiseventhavethehigh-schoolstudentsachancetofamiliarizethemselveswithuniversitystudiesthoughmeetinguniversityteachers,PhD-studentsandMSc-studentsfromIFMinactivi-tiessuchasminilectures,sciencedemonstrationsandgeneraldiscussions.
Or
ga
niz
at
iOn
Senior researchers and PhD students from the Semiconductor materials Division shared their
excitement about science and research with the pupils from Katedralskolan. In an introductory
lecture by Vanya Darakchieva and Olle Kordina, the youngsters learned about the properties and societal
impact of group-III nitrides, graphene and SiC. The young people also visited key labs and witnessed
growth runs and exciting experiments on materials characterization.
12 IFM actIvIty report 2012
Education forUndergraduate StudentsTheundergraduateeducationgivenbytheDepartmentofPhysics,ChemistryandBiology(IFM)hadfourmaindivisions2012.
•Physics(Directors of Studies: Leif Johansson/Magnus Johansson)
•Physics-MeasurementTechnology(Director of Studies: Magnus Boman)
•BiologyattheNaturalscience,TeachersandEngineeringprograms(Director of Studies: Agneta Johansson)
•ChemistryattheNaturalscience,TeachersandEngineeringprograms(Director of Studies: Stefan Svensson)
Thesedivisionshaveinturnsubprograms.
physicsstaFF•Directors of studies:LeifJohansson/MagnusJohansson•Administrative assistants: AgneVirsilaiteMaras/KarinBogg•Technical staff:HasanDzuhoandJonasWissting•Teachers (with course responsibility): TorunBerlind,JensBirch,MagnusBoman,IrinaBuyanova,ValeriuChirita,PerEklund,FredrikEriksson,JensEriksson,MatsEriksson,RagnarErlandsson,UrbanForsberg,CarlHemmingsson,LarsHultman,MagnusJohansson,KennethJärrendahl,FredrikKarlsson,PeterMünger,SonTienNguyen,Wei-XinNi,WeineOlovsson,PlamenPaskov,JohannaRosén,PerSandström,KostasSarakinos,BoSernelius,DanielSöderström,RogerUhrberg,ChariyaVirojanadara,IrinaYakimenko,FenglingZhang
Inourdivision,weareresponsibleforphysicscoursesonthefollowing9EngineeringM.Sc.programsofferedbytheInsti-tuteofTechnologyatLinköpingUniversity.(TheSwedishnameofthedegreefromoneoftheseprogramsis“Civilingenjör”.)Atotalofabout700studentsareannuallyacceptedintheseprograms.
d: ComputerScienceandEngineering(90)I: IndustrialEngineeringandManagement(180)Ii: Industrialengineeringand Management-International(40)It: InformationTechnology(30) M: MechanicalEngineering(120)Med: BiomedicalEngineering(30)Mt: MediaTechnologyandEngineering(60)tb: EngineeringBiology(30)y: AppliedPhysicsandElectricalEngineering(90)yi: AppliedPhysicsandElectrical Engineering-International(20)
ThenominaltimefortheEngineeringM.Sc.programsis5years.Thefirstthreeyearsmainlyconsistofcompulsorycour-sesinbasicsubjectsandcorrespondstoB.Sc.degree.Duringthethirdyearthestudentsmakeachoiceamongthedifferentspecialisations(profiles)inyears4-5,whichcontainsomecom-pulsorycourses(profilecourses)butmostareselectableandcanbecomposedtofitthestudentsowninterest.
TheY(Yi)-studentscanchoosebetween11profiles,twoofwhicharerelatedtoourdivision:• Theory,modellingandvisualization(Irina Yakimenko)• Materialandnanophysics( Jens Birch)
Inaddition,wealsogivephysicscoursesontheProgrammeinPhysicsandNanoscience (FyN),leadingtoaBachelorofScience(3years)withamajorinPhysics,andontheMaster’sProgrammesinPhysicsandNanoscience(MFYS),MaterialsPhysicsandNanotechnology(MPN),andBiomedicalEngine-ering(BME).
Belowisalistofthecoursesgivenbyourdivisionin2012.
tUItIon In pHysIcs
Basic courses:• ElectromagneticFieldTheory(FyN,Y,Yi),8hp• Electromagnetism(summercourse),2hp• Electromagnetism-TheoryandApplications(IT,MED),6hp• EngineeringMechanics(D),6hp• Engineeringproject(MED,Y,Yi),6hp• ModelsinPhysics(IT),8hp• ModernPhysics(FyN),8hp• ModernPhysics(MED,Y,Yi),6hp• NanoScientificProject(FyN),6hp• Nanotechnology(BME,FyN,MFYS,MPN,TB,Y,Yi),6hp• PrinciplesofPhysicsandintroductionto• Nanophysics(FyN),10hp• PerspectivesonPhysics(D,FyN,Y,Yi),2hp• Physics(D),6hp• Physics(I,Ii),6hp• Physics(M),8hp• PhysicsofSound(MT),6hp• ScienceandTechnologyforRenewableEnergyRelated
Applications(FyN,MFYS,Y),6hp• ThermodynamicsandStatisticalMechanics(FyN,Y,Yi),6hp• WaveMotion(FyN),6hp• WaveMotion(MED),8hp• WaveMotion(Y,Yi),8hp
Un
de
rg
ra
tU
ad
e e
dU
ca
tiO
n
IFM actIvIty report 2012 13
Advanced courses:• AdvancedProjectWorkinAppliedPhysics,6hp• AnalyticalMechanics,6hp• AnalyticalMethodsinMaterialsScience,6hp• ChaosandNon-LinearPhenomena,6hp• ClassicalElectrodynamics,6hp• ComputationalPhysics,6hp• ElementaryParticlePhysics,6hp• ExperimentalPhysics,6hp• MathematicalMethodsofPhysics,6hp• NanoPhysics,6hp• Optoelectronics,6hp• PhysicalMetallurgy,6hp• PhysicsofCondensedMatterI,6hp• PhysicsofCondensedMatterII,6hp• ProjectcourseinComputationalPhysicsCDIO,12hp• ProjectCourseinPhysics-DesignandFabricationofSensor
Chip,CDIO,12hp• QuantumComputers,6hp• QuantumDynamics,6hp• QuantumMechanics,6hp• SemiconductorPhysics,6hp• SemiconductorTechnology,6hp• SurfacePhysics,6hp• ThinFilmPhysics,6hp
biologystaFF• Directorofstudies:AgnetaJohansson• Educationsecretary:JessicaLövdahland Eva-MariaStigsdotter• Engineers:IngevaldAbrahamssonandToveBjerg• Teachers:JordiAltimiras,MatsAmundin,Karl-Olof
Bergman,KjellCarlsson,BoEbenman,JohanEdqvist,AndersHargeby,PerJensen,MatthiasLaska,RonnyLock,ÖrjanLönnevik,EvaMattsson,PerMilberg,BengtPersson,LinaRoth,KarinSTonderski,CorneliaSpetea-Wiklund,UnoWennergrenandThomasÖstholm
Coursesinbiologyareofferedaspartsofthefollowingstudyprogrammes:• BiologyProgramme• BachelorofScienceinBiology,profilesinEcology,Envi-
ronmentalManagementandNatureConservation,EthologyandAnimal
• BiologyandMolecularGeneticsandPhysiology• MastersofScienceinBiology,profiles,AppliedEthology
andAnimalBiology,EcologyandtheEnvironmentandMolecularGeneticsandPhysiology
• ChemicalBiology• EngineeringBiology• TheProgramforeducationinLinköping• Separatecourses• Basicyear
tHe bIology prograMMe,leadingtothedegreeofMasterofScience(240creditpoints/hp)ortothedegreeofBachelorof
Science(180creditpoints/hp).Theprogrammeincludes,inthefirsttwoyears,basiccoursesinchemistryandgeneralbiology.Inthethirdandfourthyearsthereareanumberofadvancedlevelcourses,mainlysevenprofiles;Ecology,Ethology,Microbi-ologyandMolecularGenetics,ConservationBiology,Theoreti-calEcology,ZoologyandZoophysiologyandBiomedicineandCellbiology.ThelatterprofileiscarriedoutincollaborationwiththedepartmentofPharmacologyandotherswithintheFaculty
bacHelor oF scIence In bIology,profilesinEcology,Environ-mentalManagementandNatureConservation,EthologyandAnimalBiologyandMolecularGeneticsandPhysiology(180creditpoints/hp).TheProgrammesinclude,inthefirsttwoyears,basiccoursesinchemistryandgeneralbiology.Inthethirdyearherearecoursesspecificforeachprofile.
Master oF scIence In bIology,profileinAppliedEthologyandAnimalBiology,EcologyandtheEnvironmentandMolecularGeneticsandPhysiology(120creditpoints/hp).TheprofilesinAppliedEthologyandPhysiologyareacollaborationbetweenthedepartmentofbiologyatLinköpingUniversityandtheKolmårdensDjurpark. Thefirstyearincludesninecoursesandattheendoftheyearthestudentstartwithhis/herMasterthesis.TheMasterthesisisafullyearprojectthatwilltakemostofthesecondyear.Attheendofthesecondyeartheprogrammeendswithafinalcourse–Communicatingscience.
tHe prograMMe For bIology and cHeMIstry wItH MatHeMatIcs, leadingtothedegreeofMasterofScience(240creditpoints/hp).ortothedegreeofBachelorofScience(180creditpoints/hp).Afterstudyofmathematics(40credits)thestudentmakesachoiceoffurtherstudiesinbiologyorchem-istry.
tHe cUrrent prograM For edUcatIonfortheUpperSec-ondarySchoolandthePrimarySchoolstartedin2001.TheprograminvolvesaBiologyandaNaturScienceprofile.Thedi-visionhasbeenresponsibleforthebiologypartoftheprogram.
Biologycoursesarealsogivenintheprogram cHeMIcal bIol-ogy(240or300creditpoints/hp).andengIneerIng bIology (300creditpoints/hp).
separate coUrses. AllcourseswithintheBiologyprogrammearealsoavailableasseparatecourses.BesidesthecoursesintheBiologyprogramme8separatecourseshasbeengiven.
basIc year, withintroductorycoursesinbiologyontheUpperSecondarySchoollevel.
bacHelor prograMMe, bIology prograMMe• AnimalHusbandryanditsAdministration,6hp• Botany1,6hp• Botany2,6hp• CellBiology,6hp,• DegreeProject-Bachelor’sThesis,16hp• Ecology,secondcourse,15hp• Ecology,6hp• EnvironmentalManagement,6hp• EthologyandAnimalWelfare,15hp• EnvironmentalEngineeringforBiologists,15hp• Evolution,6hp
Un
de
rg
ra
tU
ad
e e
dU
ca
tiO
n
14 IFM actIvIty report 2012
• Genetics,6hp• GenomicsandBioinformatics,9hp• HumanandAnimalPhysiology:
aproblembasedapproach,15hp• IntroductiontoBiology,3hp• IntroductiontoMolecularGenetics,6hp• IntroductiontoScientificMethods,
AnalysisandStatistics,6hp• Microbiology,6hp• MolecularBiology,15hp• NatureConservationinPractise,15hp• PrincipalsinPhysiology,6hp• ScientificMethodsandEthics,6hp• Zoology,Physiology,MorphologyandSystematics,6hp
The Programme for Biology and Chemistry with Mathematics• AnimalHusbandryanditsAdministration,6hp• Ecology,secondcourse,15hp• EnvironmentalEngineeringforBiologists,15hp• EnvironmentalManagement,6hp• Evolution6hp• Finalthesis,30hp• GenomicsandBioinformatics,9hp• NatureConservationinPractise,15hp• PopulationEcology:TheoriesandApplications,12hp
Master of Sicence in Biology, profile Molecular Genetics and Physiology• Adaption:MoleculestoOrganism,6hp• Communicatingscience,6hp• CurrentConcepts,6hp• DegreeProject-Master’sThesis,60hp• FunctionalGenomics,6hp• GeneExpressionAnalysis,6hp• ImmunologicalTechniques,6hp• MolecularPhysiology,6hp• PlantMolecularGenetics,6hp
Masters of Science in Biology, profile Ecology and the Environment• AdvancementsinEcologyandtheEnvironment
-PartI,6hp• AdvancementsinEcologyandtheEnvironment
-PartII,6hp• Communicatingscience,6hp• ConservationBiologyinsitu,6hp• CurrentConcepts,6hp• DegreeProject-Master’sThesis,60hp• Methodsinecology,6hp• ModellingofBiologicalSystems,6hp• PopulationEcology:TheoriesandApplications,12hp
Masters of Science in Biology, profile Applied Ethology and Animal Biology• Adaption:MoleculestoOrganism,6hp• BehaioralNeurobiology,6hp• Communicatingscience,6hp• ConservationBiologyinsitu,6hp• CurrentConcepts,6hp• DegreeProject-Master’sThesis,60hp• MethodsofAppliedEthology,6hp• PrimateEthology,6hp• TheoryofAppliedEthology,6hp• ZooBiology,6hp
Programme For Education - Biology courses• Biologi:Genetics,Botany,15hp• Biology(ae21-30),15hp• Biology:Zoology,Physiology,Morphology
andSystematics,15hp• Biology:CellBiologyandMicrobiology(ae1-10),15hp• EvolutionandAppliedEthology(41-50),15hp• EnvironmentalScience&Introductionto
MolecularGenetics(51-60),15hp
Engineering Biology• Bioinformatics-OverviewandPracticalApplications,6hp• CellBiology,6hp• Microbiology,6hp• PrincipalsinPhysiology,6hpChemical Biology• BehavioralNeurobiololgy,6hp• Bioinformatics,3hp• Bioinformatics-OverviewandPracticalApplications,6hp• CellBiology,6hp• Genetics,6hp• ImmunologicalTechniques,6hp• Microbiology,6hp• Molecularbiology,15hp• MolecularPhysiology,6hp• Plantmoleculargenetics,6hp• PrincipalsinPhysiology,6hp
Separate Courses• AnimalBehaviour,15hp• AnimalCommunicationII,7,5hp• BehaviourandBiologyoftheDog,part1,7,5hp• BehaviourandBiologyoftheDog,part2,7,5hp• BehaviourandBiologyoftheDog,part3,7,5hp• IntroductiontoEthology,7,5hp• Faunistics&Floristics,9hp,summercourse• WetlandsandStreams,EcologicalApplications,15hp
basIc yearBiologyforFoundationYear3hpBiologyforFoundationYear7,5hp
chemistrystaFF• Director of studies:StefanSvensson• Education secretary:RitaFantl• Study counselor:HelenaHerbertsson• Technical staff:BoPalmquist• Teachers:AnkiBrorsson,UnoCarlsson,JohanDahlén,
KarinEnander,PerHammarström,HelenaHerbertsson,Bengt-HaraldJonsson,PeterKonradsson,IngemarKvarnström,Per-OlovKäll,MariaLundquist,PatrikLundström,AnnikaNiklasson,GunillaNiklasson,LarsGöranMårtensson,PeterNilsson,LarsOjamäe,Nils-OlaPersson,ElkeSchweda,MariaSunnerhagen,MagdalenaSvensson,RogerSävenhed.
Un
de
rg
ra
tU
ad
e e
dU
ca
tiO
n
IFM actIvIty report 2012 15
StudyprogrammesinChemistry:• Chemistry(Ke)• ChemicalBiology(KB)• ChemicalAnalysisEngineering(KA)• MasterofScienceprogram.Profiles:Organic Synthesis/MedicinalChemistryandProteinScience• TechnicalBiology(TB)• TeacherTrainingPrograms• SeparateCourses• BasicYear
Mostofthechemistrycoursesofferedarepartofthethree-yearprogrammes,cHeMIstry (Ke)andcHeMIcal bIology (Kb),(180creditspoints/hp).StudentscompletingtheseprogrammesareawardedthedegreeofBachelorofScienceinChemistry.AllcourseswithintheChemistryProgramarealsoavailableasseparatecourses.Theprogram,cHeMIcal bIology (Kb),haveanopenentranceforthestudents:afterayearofstudiesthestudentscanchoosetocontinueinnaturalscience(ortochooseamoretechnicalvarianttobecomeengineers.ChemicalBiologycombinesun-derstandingofcomplexbiologicalprocesseswiththefunda-mentalprinciplesofchemistry.During2009allstudyprogramsweretransformedintothree-yearBachelorofScienceprograms(180hp)andmasterprogramsonadvancedlevelforfurthertwoyears(120hp).ChemistryoffersmasterprofilesinorganIc syntHesIs/MedIcI-nal cHeMIstry and proteIn scIence.
SomeofthechemistrycoursesarealsoincludedinthestudyprogrammesofstudentsmajoringinbIologyandin teacHer traInIng prograMs(studentsbecomingUpperSecondarySchoolteachers).Biologybachelorsarerequiredtoearn21hpchemistry,whileScienceEducationmajorsearnupto60-120hpofchemistry.IntroductorycoursesinchemistryforthestudyprogramMedIcInal bIologywerestartedundertheautumnsemester.
BesidestheabovementionedcoursesaspartoftheMathemati-calNaturalScience,chemistrycoursesareofferedforengineer-ingstudentsintheM.Sc.programcHeMIcal bIology(alsomentionedabove)andengIneerIng bIology (TB)(270hp).tHe cHeMIcal analysIs engIneerIng(KA)(180hp),athree-yearprogramme,hasanalyticalchemistryasthemainprofile.
basIc year(130students,13hp),withintroductorycoursesinChemistryonasecondaryschoollevel,isofferedtostudentswhodonotmeettherequirementsforstudiesattheUniversity.
Finaltheses,thelast30/45or60hpintheChemistryandChemicalBiologyprogram,havebeencarriedoutbysixstu-dents.Fortheengineeringprograms14KAstudentscarriedoutthe16hp,and14KBstudentsthe30hpfinalthesesworkinthechemistryarea.BesidesprojectsconductedoncampusorattheUniversityHospital,wereprojectsperformedatdifferentnationalcompaniesandatUniversityofSidney.
Undertheperiod10studentswereawardedtheMasterofSci-encedegreeand17studentstheBachelorofSciencefromtheChemistryandChemicalBiologyprograms.FromtheChemi-calAnalysisEngineeringprogramwere17awardedthedegreeBachelorofScienceinChemicalAnalysisEngineeringand15ChemicalBiologyengineeringstudentswereawardedtheM.Sc.degree.
Altogetherapproximately600studentshaveenrolledinabout60coursesinchemistrythroughtheyear2012.
CoursesnatUral scIences coUrses HpGeneralChemistry1 6GeneralChemistry2 6OrganicChemistry1 6OrganicChemistry 3Biochemistry1 6PhysicalChemistry-Thermodynamic 6AnalyticalChemistryS 6OrganicChemistry2 12AnalyticalChemistryT 6InorganicChemistry 6CalculationToolsforChemistryStudents 6ExperimentalChemistry 6PhysicalChemistry-Spectroscopy 6AnalyticalChemistry-Chromatography 6OrganicAnalyticalChemistry 12OrganicChemistry 15OrganicSynthesis 9Physical-OrganicChemistry 6NanoChemistry:SurfaceandColloidChemistry 6MedicinalNaturalProducts 6ProteinChemistry 12CombinationalProteinEngineering 6BiomolecularDesign 6DegreeProject-Bachelor’sThesis(KB) 16DegreeProject-Bachelor’sThesis 16DegreeProject-Master’sThesis 30/45/60DegreeProject-Master’sThesis(KB) 30/45/60
tecHnIcal coUrses Hp ChemistryforFoundationYear 7.5+6OrganicChemistry 6Chemistry(C,Y,D) 6PhysicalChemistry(KB) 6AnalyticalChemistry(TB) 6BiotechnicalBiochemistry(I) 6LifeScientificResearchReview 6BiostructuralTechnologies 6Biochemistry2 6BiologicalMeasurements 6GeneTechnology 3ProjectCourse;ChemicalBiology 6AppliedStructuralBiology 6Proteomics 6SpectroscopyandKinetics 6InteractionsandRecognitioninBiomolecularSystems 6ProteinEngineering 6ProteinChemistry 6EnvironmentalChemistry 6BiomolecularDiseaseProcesses 6ProteinEngineering 3MaterialsforSustainableEnergyProduction 6FundamentalsofChemistry 6PreparationofProteins 3PrinciplesofEnvironmentalChemistry 6Biochemistry1(KA) 6ApplicationAreastoChemicalAnalysisEngineering 6IntroductiontoForensicChemistry 6
Un
de
rg
ra
tU
ad
e e
dU
ca
tiO
n
16 IFM actIvIty report 2012
ProjectinChemicalAnalysisEngineering 6ForensicChemistry 6DegreeProject-Bachelor’sThesis(KA) 16DegreeProject-Master’sThesis(KB) 30DegreeProject-Master’sThesis(KB-TBprofile) 30
teacHer edUcatIon Hp Chemistry:GeneralChemistry(1-15hp) 15OrganicChemistryBiochemistryTeachingPracticeandSubject-specificDidactics(16-30hp) 15InorganicChemistry,ChemicalExperimentsandTeachingPracticewithSubjectDidactics(31-45hp) 15AnalyticalChemistryandTeachingPracticewithSubjectDidactics(46-60hp) 15Chemistry:OrganicChemistry(61-75hp) 15BiochemistryandAnalyticalChemistry(76-90hp) 15Thesis(76-90hp) 15NaturalScienceChemistry(11-20) 15
physics – measurement technologyactIvIty FIeldThedivisionprovidesundergraduatecoursesin:• Physics• Measurementtechnology• BiomaterialsandBiotechnology
staFF• Director of studies: MagnusBoman.• Administrativeassistants:KarinBogg,RitaFantl,ÅsaForsell,
AgneVirsilaiteMaras.• Technical staff:HasanDzuho,JonasWissting.• Course leaders: DanielAili,MikeAndersson,ValerioBeni,
PederBergman,LarsBjörklund,CarolineBrommesson,ThomasEderthAndersElfwing,LarsAlfredEngström,JensEriksson,MatsEriksson,RagnarErlandsson,DanielFilippini,AnneHenry,JohanHurtig,OlleInganäsHenrikJakobson,MagnusJohansson,KennethJärrendahl,Carl-FredrikMandenius,WeineOlovsson,HenrikPedersen,GaliaPozina,MehrdadRafat,PerSandström,AnkeSuska,KajsaUvdal
HIgHlIgHts 2012• ThetwoseparatedivisionsPhysics, natural scienceandMeas-
urement technologyweremergedintoonecommondivision:Physics – Measurement Technology.
• ThenewcourseIntroductiontoBiosensor Technologywasdeveloped(ValerioBeni).
• ThenewcourseMaterials for Biomedical Engineering; from nano- to macro-level was developed(CarolineBrommesson).
prograMMesThecoursesaregivenforthe:• EngineeringMasterofScienceprogrammes:
BME,D,I,Ii,KB,M,MED,TB,Y.
• EngineeringBachelorofScienceprogrammes:DI,EL,KA,MI.
• BachelorofScienceprogram:FyN.• ProgrammesforTeacherEducation:LÄR,ÄLP.• Basicyearandsemester:BAS,BAST.• andasSeparatecourses:FRI.
proFIlesAtanadvancedlevel,coursesareprovidedfortwoprofiles:• Devices and Materials in Biomedicine (TB) Profileleader:KarinEnander.• Industrial Biotechnology and Production (KB,TB).Profileleader:Carl-FredrikMandenius.
coUrses• AstronomyandGeophysics(FyN),6hp• Basiceducation,physics(BAST),15hp• EngineeringMechanics(KB,MED,TB),6hp• MechanicsI(FyN),6hp• MechanicsII(FyN),4hp• MolecularPhysics(TB),6hp• NaturalScience:Physics(LÄR,ÄLP),15hp• PhysicsA(BAS),7,5hp • PhysicsB(BAS),12hp• Physics(KB,TB),6hp• Physics1-15hp,(LÄR),15hp• Physics16-30hp,(LÄR),15hp• Physics31-45hp,(LÄR),15hp• Physics46-60hp,(LÄR),15hp• Physics61-75hp,(LÄR),15hp• Planets,starsandgalaxies(FRI),4,5hp• ResearchatLiTH:IFMpart• ThesisinPhysics(76-90hp)(LÄR),15hp• WavePhysics(EL,MI),4hp
MeasUreMent tecHnology:• ComputersinMeasurementSystems(KA),6hp• ContemporarySensorSystems(BME,FyN,MFYS,Y),6hp• ElectricalMeasurementSystems(EL),4hp• MeasurementTechnology(FyN,Mat,MED,Y,Yi),1,5hp• MeasurementTechnology(D,DI),4hp• MeasurementTechnology(M,MI),6hp• MeasurementTechnology(TB),6hp
bIoMaterIals and bIotecHnology:• BiomedicalMaterials(BME,TB),6hp• BiosensorTechnology(I,Ii,KB,TB),6hp• BiotechnologyManufacturing(KB,TB),6hp• BiotechnologyProject(I,Ii),6hp• Degreeproject-Master’sThesis(TB),30hp• DesignofBiotechnicalProcessandProduction-systems,
projectCourse(KB,TB),6hp.• EngineeringProject(TB,KA),6hp• MaterialsandNanotechnology(TB),6hp• MaterialsforBiomedicalEngineering;from-nano-to
macro-level(MED),8hp• MaterialsinMedicine,CDIO-Project(TB),6hp• MicrosystemsandNanobiology(TB,Y),6hp• Imagingandubiquitousbiosensing(TB),6hp• IndustrialBiotechnology(KB,TB),6hp• IntroductiontoBiosensorTechnology(MED),6hp• SupramolecularChemistry(TB),6hp• Surfacesandinterfaces(KB,MED,TB),6hp• SurfaceScience(KB,TB),6hp
Un
de
rg
ra
tU
ad
e e
dU
ca
tiO
n
IFM actIvIty report 2012 17
International Master’s programmesapplIed etHology and anIMal bIologyThisprogramdealswithanimalbehaviourandbiologyfromanapplicationsperspective.Centralissuesarethebiologyofstressandanimalwelfare,domesticationeffectsonbehaviour,physiologyofbehaviourandconservationbiology. TheprogrammeistaughtinassociationwithKolmårdenZoowhichsometimesistheteachingvenue.Learningrestsonamixofclassroomlectures,seminarsandhands-onprojectsinvolvingstudiesofanimalsincaptiveenvironments.Allovertheworld,problemsassociatedwithkeepinganimalsincaptiv-ityrequireincreasedattentionandknowledge. Aftercompletedstudies,thestudentshouldbewell-acquaint-edwiththeoriesofanimalbehaviourandbiology,andhaveacloseunderstandingoftheconceptsofanimalwelfareandcon-servation.Examinationrequirestheabilitytoplan,implementandpresentascientificinvestigationinthesubjectframeworkoftheprogramme. Moreinformation http://cms.ifm.liu.se/biology/
Master’s prograMMe In MolecUlar genetIcs andpHysIology, 120 ectsThismaster’sprogrammefocusesoneukaryoticmoleculargeneticsandphysiology,withparticularemphasisonhowthisrelatestobothembryonicdevelopmentandadulthomeostasis. Theprogrammeisdividedintoafirstyearofcoursesandasecondyearofworkonaparticularresearchprojectinalaboratorysetting.Thecoursesaretaughtusingamultitudeofformats,includingregularlectures,practicallaboratoriesandseminardiscussions. ThelaboratoryclasseswillutilizepowerfulbiologicalmodelsystemssuchasArabidopsisorchickentoillustratemodernconceptsofmoleculargeneticsandphysiology.Thethesispro-jectduringthesecondyear(diplomawork)willbeconductedinaresearchlaboratoryatLiUorotheruniversity,inindustryorthepublicsector. Duringthefirstandsecondyear,therewillbeaparallelseminarcourseinCurrentConceptsinLifeSciences,involv-ingresearcharticlesandresearchlecturesbyinvitedspeakers.Duringthesecondyear,aparallelcourseinthesiswritingandpresentationtechniqueswillbegiven. Moreinformationhttp://cms.ifm.liu.se/biology/
Master’s prograMMe In ecology and tHeenvIronMent, 120 ectsStudentswilldevelopacriticalscientificapproachtoecol-ogyandanawarenessofitsroleinsociety.Theprogrammeincludestraininginskillsinexperimentaldesignandecologi-calfieldmethodology,bothintheclassroomandduringtheindividualprojectinthesecondyearwhichcanbelinkedtocurrentresearchprojectsatthedepartment–e.g.ingrasslandandweedecology,ecologyandBiogeochemistryofshallowwatersorconservationbiology.Alternativelythelinkcanbetootheruniversitiesorresearchinstitutes. Thismaster’sprogrammealsoemphasizestheneedfor,anduseof,mathematicalmodelsandstatisticalanalysesforad-dressingcomplexecologicalproblems.Suchmethodsserveas
powerfultoolstoe.g.identifycropmanagementstrategiesforeffectivebiologicalcontrol,understandlife-historystrategiesandtheriskofpopulationextinctioninavariableenvironment,orevaluatethepreservationstatusofnaturereservesandtheimpactofmanagementschemes.Thecoursescovertheoriesinpopulation,communityandsystemsecologyandhowtheyrelatetocurrentenvironmentalproblems.Examplesaremethodsinecology,mathematicalmodellingofbiologicalsystemsandconservationbiology. Moreinformation http://cms.ifm.liu.se/biology/
Master´s prograMMe In pHysIcs and nanotecHnologyAimandOrganisation:TheMaster’sProgrammeinMaterialsPhysicsandNanotechnologyeducatesspecialistsintheareaofphysicsofnovelmaterials.Themasterstudentsarepreparedforuniversityorindustrycareersinmaterialsrelatedresearchanddevelopment. Theprogrammecoversawiderangeofmaterialsincludingmaterialsusedinsemiconductorandnano-technology,opto-electronics,biotechnicalapplications(biocompatibility),chemi-calandbio-sensors,mechanicalapplicationssuchashardnessandelasticityetc. Theprogrammecomprisesfoursemesters.Thefirstautumnsemesterconsiststoalargerpartofcompulsorycourseswhilethetwofollowingsemesterscontainsmainlyelectivecourses.ThefourthsemesterisassignedtotheMaster’sthesisproject. Thestudentcanchosecoursesamongessentiallyfourelec-tiveprofiles:
• ElectronicMaterialsandDevices• SurfaceandNanoSciences• ComputationalPhysics• OrganicElectronicsandSensors
Themaster’sthesisshouldbebasedonhighqualityscientificresearchwithintheareaoftheprofilechosenbythestudent.ThisworkcanbeperformedeitheratLinköpingUniversityoratotheruniversities.
Informationaboutthismaster’sprogrammecanbefoundonthewebpage:http://www.liu.se/en/education/master/programmes/6MMPN?l=en
progressTheprogrammestartedin1996andaroundtenstudentshavesincethenjoinedtheprogrammeeachyear.Thisyearwhentuitionfeeswereintroducedthenumberdroppedsoonlyfivestudentsenteredtheprogramme.ThestudyresultsofourIn-ternationalmaster’sstudentshaveoverallbeengood.SeveralofthemhaveproducedverygoodresultsandhaveafterreceivingtheirMScidegreecontinuedtoaPhDdegreeatLiTH,KTH,CTH,LTH,KUandatuniversitiesabroad.
Un
de
rg
ra
tU
ad
e e
dU
ca
tiO
n
18 IFM actIvIty report 2012
Graduate Education
Forum scientiuma MUltIdIscIplInary doctoral prograMMe wItHIn bIology, cHeMIstry, MedIcIne, pHysIcs and tecHnology
March 2012 Forum Scientium arranged a Reunion were former PhD students and supervisors met the current
StefanKlintström(programme director, director of studies),CharlotteImmerstrand (assistant director of studies), IngemarLundström(chairperson of the scientific advisory committee), AnetteAndersson(administrator)
IFMisthehostforthedoctoralprogrammeForumScientium(www.liu.se/scientium). ForumScientiumisamultidisciplinaryprogrammeandthedoctoralstudentshavebackgroundswithinbiology,chemistry,medicine,physicsandtechnology.Theresearchprojectsarelo-catedattwofaculties,FacultyofHealthScienceandtheFacultyofScienceandEngineering.ForumScientiumhasfinancialsupportfromthefaculty,fromthesupervisorsandfromtheSwedishResearchCouncil. Thestrategicobjectivesare“PhDswellpreparedfortheirfuturecareersthroughastructureddoctoralprogrammewhichincludesresearchofworldclass,andcooperationandmultifac-etedcontactswithindustryandsociety”. During2012,thedoctoralprogrammeForumScientiumhadaround60PhD-students,and8PhD-dissertationsweredefended. Since2008,aspecialForumScientiumAwardexists.ForumScientiumPhDscanapplyforanawardproviding50%ofthesalaryforaperiodofuptooneyearfromthePhD-exam.Theawardaimatpromotingthefuturecareerfortheawardees,andtopromotetwinningamongactiveForumScientiummem-bers.MostimportantisalsothattheyshouldbeofbenefitfortheactivePhD-students.Theawardeesarecalled“Transform-ers”andduring2012wehadalltogetherfivetransformers.
gr
at
Ua
de
ed
Uc
at
iOn
otHer actIvItIes dUrIng 2012:• TenmonthlymeetingsatCampusUSandValla• ReunionMarch2012• StudyvisittotheBostonareaMay2012• SummerConferenceAugust2012• PostercompetitionAugust2012• Yearlyindividualfollow-upwitheachPhD-student• CoursesofhighqualityandmuchmorethatcanbefoundintheForumScientiumYearlyReportthatispublishedatwww.liu.se/scientium.
agora Materiae
March 2012 Forum Scientium arranged a Reunion were former PhD students and supervisors met the current
AFM Director:LarsHultmanGraduate School Head:PerOlofHoltzGraduate School Mentor:StefanKlintströmGraduate School Administrator:KirstinKahlAgora Student Council in end of 2012:MartinEriksson(SemiconductorMaterials)ChristopherTholander (Thin Film Physics, IFM)ThomasFransson (Computational Physics, IFM)MattiasCalmunger(Engineering Materials, IEI)RogerMagnusson (Applied Optics, IFM)ZiaUllahKhan(Organic Electronics, ITN)
AgoraMateriaeisaGraduateSchoolforPhDstudentsworkingintheresearchfieldofnovelfunctionalmaterials.TheAgoraMateriaeGraduateSchoolisdedicatedtooffergraduatestudiesinatruemulti-disciplinaryenvironment.Agorawasstartedupinthebeginningof2012andhasgot40membersduringitsfirstyear.AgoraMateriaeishostedbyIFM,butattractsPhDstudentsfromseveraldepartmentssuchasITNandIEI.AgorahasfinancialsupportfromAFM,whichmanageslargerinvest-mentsinresearchandinfrastructure,basedonthestrategicsupportfromtheSwedishgovernmentformaterials-science. ThePhDstudentscanworkinanenvironment,attheforefrontwithinseveralresearchfieldswithinmaterialsscienceandthestudentsareofferedbreadthanddepthinscientificanddidacticcompetence.AstudentcouncilwithfiveorsixPhDstudentsintheAgoragraduateschoolactsascontactbetweentheAgoramembersandthemanagementofthegraduateschool.Thestudentcouncilisresponsibleforactivitiese.g.studyvisits,thehomepage,symposiaandasummerconfer-ence.
IFM actIvIty report 2012 19
TheAgoraMateriaememberswillbenefitfrom:• specifictrainingcoursesofferedtoAgoraMateriaemem-
bers,butalsototheextensivemenuofPhDcoursesatIFM• researchattheinternationalforefront,inaninternational
atmosphere,offeringabroadscientificanddidacticcompe-tence
• alargenumberofexperiencedthesisadvisorsfromvariousdisciplines
• researchprogramsofhighindustrialrelevance• extensiveandadvancedexperimentaltechniquesavailable
onstate-of-the-artequipment
SomeimportantactivitieswithintheAgoraMateriaeGraduateSchoolare:• Seminar activity.Everyfourthweek,thereisajointPhDstu-
dentsseminaractivity.Alsoinvitedspeakers,oftenformerPhDstudents,giveseminarsattheseoccasions.
• Common courses. AgoraMateriaegraduateschoolwillar-rangecommoncourses.Canalsobecompulsorycoursesforthegraduateschool.
• Study visits:Therearevisitstoresearch-intensivecompaniesand/oracademicdepartmentsarranged.AlsostudyvisitsoutsideSwedenwilltakeplace.
• Summer conference: Everyyear,therewillbeasummerconferenceduringapproximatelythreedaysarranged,withactivitieslikeinvitedpresentations,postersessions,
• Progress reports.Togetherwiththeindividualstudyplan,theprogressplansthreetimesayearareafollow-upoftheprogressinthePhD-studentsprojects,planningoftheirresearchworkwiththepurposetoimprovethecommunica-tionbetweenthePhD-studentsandtheirsupervisors.
• Yearly individual follow-up.EachPhDstudentinAgorawillhaveadiscussionwiththegraduateschooldirectortodis-cussproject,progress,timeschedule,butalsoproblemsinthegraduateprogram.
IFM graduate programmePerOlofHoltz,Director of Graduate Studies
ThegraduateprogramatIFM,LinköpingUniversityaimsatadegreeofLicentiateorDoctorofTechnologyorPhilosophyforthePhDstudents.TherequirementsfortheLicentiate/PhDexamconsistofacoursepart,correspondingto30/45and60/90creditpoints(hp),andadoctoral/licentiatethesis.ThenominaltimefortrainingtotheDoctordegreeisfouryears(full-timetraining)andfortheLicentiatedegreeapproximatelyhalfthetime.ThePhDstudentsareencouragedtodoteachingatundergraduatelevel(atmaximum20%oftheirtime),whichmeansthatthetotaltimetoprovidetheDoctordegreecanbeuptofiveyears.Duringtheyear2012,38newstudentsenteredthegraduateprogramatIFMwithPhDasthefinalexamand3newstudentsstartedthegraduateprogramwiththelicentiateexamasthefinalexam.ForadevelopmentofthenumberofstudentsenteringthegraduateprogramatIFMduringthelastfiveyears,seeDiagram1below.
2008 2009 2010 2011 2012PhD as final exam 24 52 30 29 38Male 12 35 18 18 25Female 12 17 12 11 13
Lic as final exam 4 11 4 4 3Male 1 7 2 4 3Female 3 4 2 0 0
Later part of PhD 5 2 6 7 2Male 3 2 5 1 2Female 2 0 1 6 0
total 33 65 40 40 43
Diagram 1 showing the number of students entering the graduate program at IFM during the last five years.
Duringtheyear2012,therewereintotal50exams;31PhDexamsand19licentiateexams,takenatIFM.Foradevelop-mentoftheexamsduringthelastfiveyears,seeDiagram2below.
PhD exams 2008 2009 2010 2011 2012 totalMale 21 11 17 7 19 75Female 4 7 8 3 10 32total 25 18 25 10 29 107
Lic exams 2008 2009 2010 2011 2012 total
Male 4 1 7 7 12 31Female 3 2 2 3 7 17total 7 3 9 10 19 48
Diagram 2 showing the number of exams from the graduate program at IFM during the last five years.
ThecoursemenuisorganizedjointlyforthedifferentscientificresearchgroupsatIFM,whichmeansthatabroadcoursemenuwithinphysics,chemistryandbiologyisoffered,reflectingthestronginter-disciplinarycharacterofIFM.Duringtheacademicyear2011/12,thePhDstudentscouldchoosebetweenapproximately60coursesatIFM.ThestudentscanalsofollowcoursesgivenatthegraduateschoolsAgoraMateriaeandForumScientiumatIFM,atotherdepart-mentsofLinköpingUniversityoratotheruniversities.ForallPhDstudents,whodoteachingatundergraduatelevel,abasicpedagogicscourseiscompulsory.IFMisarrangingaspecificpedagogicscourseforPhDstudentsregisteredatthedepart-ment.Acourseinsciencemethodologyandethicsiscompul-soryforallPhDstudents.AtIFM,adoctoral-studiesboardisaforumforvarioustop-icsassociatedwiththegraduatestudies.Thiscouncil,withfourmeetingsperyear,hasthefollowingmembers:TheDirectorofGraduateStudies,onerepresentativeforeachscientificre-searchareaatIFMandtwoPhDstudentrepresentativesfromPhysicsandChemistry/Biology,respectively.Eachgraduatestudenthastomakeupanindividualstudyplaneachyear.Thisstudyplanshouldcontainatimesched-uleforthePhDstudies,aprojectplanfortheresearchworktogetherwithteachingandotherdutiesatthedepartment.Thisindividualstudyplanisfollowedupeachyear.
gr
at
Ua
de
ed
Uc
at
iOn
20 IFM actIvIty report 2012
phd courses offered
dUrIng tHe acadeMIc year 2011/12• IntroductorycourseinScanningProbeMicroscopy (3hp):RagnarErlandsson• QuantumDynamics(6hp)IrinaYakimenko• Quantumcomputers(6hp):IrinaYakimenko• QuantummechanicsII(7,5hp).IrinaYakimenko• ElectronicStructureTheory(5hp).IgorAbrikosov• ChemicalVaporDeposition(8hp).HenrikPedersen• IonBeamAnalysisinMaterialScience(7.5hp).JensJensen• SoftMaterialsandSelfAssembly:NiklasSolin• Theoreticalecology–societyrelatedecology(6hp) BoEbenman• OganicChemistry(7,5hp):StefanSvensson/PeterKonradsson• Differentialequationsforbioapplications:PeterMunger/ BoEbenman/UnoWennergren• Biotechnology,Advancedcourse(10hp):Carl-Fredrik Mandenius• BiotechnologyExp.Techniques(10hp):Carl-Fredrik Mandenius• ComputationalQuantumChemistry(7,5hp):Patrick Norman/MatieuLinares/BoDurbeej• Microsystemsandnanobiology(6hp)AndersElfwing• MolecularMechanicsandDynamicsinChemistry: MatieuLinares• Magneticresonancecharacterizationofdefectsin semiconductors(6hp):NguyenSon• ChemicalSensorandScienceTechnology(4hp): AnitaLloydSpetz• ContemporarySensorSystems(6hp):AnitaLloydSpetz• NEXAFS:KajsaUvdal/PatrickNorman• Molecularimaging,vibrations:ThomasEdert• Growthofwidebandgapsemiconductors:AneliaKakanakova• Electricalcharacterizationofsemiconductormaterialsand devices:EjnarSveinbjörnsson• AdvancedmethodsforXRD(5hp):JensBirch• NanoPhysics(6hp):PlamenPaskov• PropertiesofIII-nitridesemiconductors(5hp): PlamenPaskov• Advancedsemiconductormaterials(7.5hp): VanyaDarakchieva• AnalyticalMethodsinMaterialsScience(AMMS)(6hp): FredrikEriksson• ManyparticlephysicsI(7,5hp):BoSernelius• Electrodynamics(6hp):BoSernelius• SurfacePhysics(6hp):ChariyaVironjanadara• Introductiontotheoreticalmethodsinmaterialphysics: BjörnAlling• Semiconductorphysics(10hp):PederBergman• Timeresolvedspectroscopy:GaliaPozina/PederBergman• Ramanspectroscopy(3hp):IvanIvanov• Nucleation,growthandstructuralevolutionofthinfilms andnanostructures:JGreene/LHultman/JBirch• StatisticalMethodsinExperimentalSciences(4hp):Anders Grimvall(HU)• BasicmanagementofResearchProjects(1,5hp):Stefan Klintström/RuneOlsson• Bioethics/researchethics(3hp):StellanWelin/ HealthUniversity• IntellectualPropertiesasaBusinessTool(3hp): StefanKlintström/LenaSjöholm• MagnusKlofsten/ArneJakobsson• ModernBiologyfornon-biologists(6hp):StefanKlintström
• BiosensorTechnology(6hp):FredrikWinquist• AdvancedBiosensorTechnologywithMedicalApplications (4/6hp)FredrikWinquist• Chemistry(6hp):Nils-OlaPersson• BiophysicalChemistry(7,5hp):Nils-OlaPersson• NanoChemistryII(SurfacesandColloids)(6hp): NilsOlaPersson/LarsOjamäe• IntroductiontoConceptsinMolecularGenetics:PerJensen• ScientificPublishing(3hp):PerJensen• Biomolecularinteractions(7,5hp):AnkiBrorsson/ Bengt-HaraldJonsson• Bio/nanotechnology(3hp):Bengt-HaraldJonsson• ProteinChemistry:LarsGöranMårtenson/ MariaSunnerhagen• Defectsanddislocations:JawadUlHassan• FluorescenceMicroscopy:PerHammarström• MolecularBasisofProteinConformationalDiseases: PerHammarström• Semiconductorphysics(6hp):FredrikKarlsson• ImagingandUbiquitousBiosensing(6hp):DanielFilippini• Appliedstructurebiology(6hp) :MariaSunnerhagen• Biomolecularstructureanalysis(6hp):PatrikLundström• Biomeasurementtechnology(6hp):MariaSunnerhagen• StatisticalandThermalPhysicsI(7,5hp):PeterMunger• TransmissionElectronMicroscopyI(7.5hp):PerPersson• Vacuumscienceandtechnology(7.5hp):PerEklund• Chaosandnon-linearphenomena(6hp):MagnusJohansson• Semiconductordevicephysics(7.5/10hp):WeiXinNi• Optoelectronics(6hp):WeiXinNi• Thinfilmphysics(6hp):UlfHelmersson• Plasmaphysics(6hp):UlfHelmersson/KostasSarakinos• ClusterAssembledmaterials(6hp):GueorguiK.Gueorguiev• Photovoltaicenergyconversion:KoenVandewal/OlleInganäs
gr
at
Ua
de
ed
Uc
at
iOn
IFM actIvIty report 2012 21
scIentIFIc brancH oF
Applied Physicsgeneral InformationsteerIng coMMIttee dUrIng year 2012ProfBoLiedberg(chairpersonJan-March),profKennethJärren-dahl,profKajsaUvdal,profOlleInganäs,profCarl-FredrikMan-denius,profAnthonyTurner,profAnitaLloydSpetz,profKajsaUvdalandassprofStefanKlintström(chairpersonApril-Dec).
researcH dIvIsIons and proFessorsApplied Optics:KennethJärrendahl,HansArwinApplied Physics:RagnarErlandsson,HelenDannetun(RectorLinköpingUniversity),MartinHolmberg(GuestProffromSwedishNationalDefenceCollege,Stockholm,Sweden),PenttiTengvall(GuestProffromGothenburgUniversity,Sweden)Applied Sensor Science: AnitaLloydSpetzBiomolecular and Organic Electronics: OlleInganäsBiosensors and Bioelectronics:AnthonyTurner,FredrikWinquist,IngemarLundström(Emeritus)Biotechnology:CarlFredrikMandenius,AndersBrundin(Adjunct)Molecular Physics:BoLiedbergMolecular Surface Physics and Nanoscience:KajsaUvdalSurface Physics and Chemistry:MatsFahlman
larger researcH prograMMes• StrategicFacultyGrantAFM–AdvancedFunctionalMaterials• VINNEXCenterFunMat• TheLinköpingCenterforNanoscienceandNanotechnology-
CeNano• EUMarieCurieITN“Seacoat”• SSFfundedOPEN(OrganicHybridPrintedElectronicsand
Nanoelectronics)• ACostNetwork,EuNetAir• LinköpingInitiativeforLifeScienceTechnologies(LIST)• PowerPapersfundedbytheKnutandAliceWallenberg
foundation• EUMarieCurieITNRenaissance• EUModellingofelectronicprocessesatinterfacesin
organic-basedelectronicdevices(MINOTOR)• EUAll-carbonplatformsforhighlyefficientmolecular
wire-coupleddye-sensitizedsolarcells(MOLESOL)• EUNextGenerationHybridInterfacesfor
SpintronicApplications(HINTS)• EUSUstainableNovelFLexibleOrganicWattsEfficiently
Reliable(SUNFLOWER)
sUMMary oF actIvItIesTheresearchwithintheScientificBranchofAppliedPhysicsismultidisciplinaryandinmanycasesdirectedtowardstheareaofLifeScienceTechnologies.Therewere38PhDstudentswithintheScientificAreaAppliedPhysicsduring2012.FourPhDstudentsdidsuccessfullydefendtheirPhDthesis,andtwodefendedtheirLicentiate.MostofthePhDstudentsparticipateinthegraduateschoolsForumScientiumorAgoraMateriae(seeseparateentries).The
ap
pli
ed
ph
ysi
cs
PhDstudentsworknormallyinprojectsthatinvolvetwoormoredivisionsordepartmentsatLinköpingUniversity.ForumScientiumisdirectedbyDrStefanKlintström,whoalsoisthechairpersonoftheScientificAreaAppliedPhysics.
edUcatIonStafffromtheScientificAreaAppliedPhysicsteachesinseveralundergraduateprograms,especiallywithintheprogrammes“EngineeringBiology”and“AppliedPhysicsandElectricalEngi-neering”.
Highlights during 2012
waste MaterIals FroM paper pUlp processIng to bUIld polyMer electrode For storIng cHarge
Polymer electrodes incorporating polypyrrole and lignin derivatives, coming from brown liquor formed during paper processing, enable charge storage in the quinone functions deriving from lignin. [G. Milczarek and O. Inganäs, Science 335 (6075), 1468 (2012)]
new generatIon sIc-Fet gas sensorsAnewgenerationofSiC-FETswasdevelopedbythespin-offcompanySenSiCABincollaborationwithAppliedSensorScienceandFunMat.Thenewsensorsshowlargelyimprovedsensorcharacteristicsintermsofselectivity,sensitivityandlong-termstability.Itisalsopossibletofine-tunetheoperationparametersforuseofthesensorsinalarmpurposes,demon-stratedforammonia.
Layout of SiC-FET gas sensor chip including sensors and resistive heater. Background, part of the processed SiC wafer.
depUty cHaIr oF tHe cost networK, eUnetaIrLloydSpetzwasappointedDeputyChairoftheCOSTNetwork,EuNetAirTD1105,withpartnersfrom25countriesinthefieldofNewSensingTechnologiesforAir-PollutionControlandEnvironmentalSustainability.
22 IFM actIvIty report 2012
sweden-Japan seMInar on nanoMaterIals and nanotecHnology (sJs-nano)TheSweden-JapanSeminaronNanomaterialsandNano-technology(SJS-Nano)wasorganized10-11September2012byLinköpingBiosensorsandBioelectronicsCentre,IFM,LinköpingUniversity.Sessionsincludedtheoreticalandexperi-mentalworkson:• BiomedicalNanotechnology• Nanotheragnostics• EnergyandEnvironmentalNanotechnology• Nanobioanalytics• NanofabricationandEngineering
tHe 22nd world congress on bIosensors In cancún, MexIco
Linköping University had an impressive stand at the exhibition
Biosensors2012washeldinCancún,Mexico,fromTuesday15toFriday18May2012.CongressChairpersonoftheeventwasProfAnthonyPFTurner,LinköpingUniversity,Sweden.
sUMMer scHool on prInted bIosensors organIsed by lIU In cancUn, MexIcoThepre-congressSummerSchoolonPrintedBiosensorsandElectronics,aimedatprovidinganindepthandtutorialviewofthisspecialisttopic.ThiswasorganisedbyLinköpingUniver-sityinassociationwithElsevierandsupportedbyErkon.TheincreasingpopularityoftheSummerSchoolwasdemonstratedbythecapacityaudienceofaround100delegates.Thedelegatesweretreatedtoauniqueinsightintothecommercialrealityofbiosensorproductionwithcopiousamountsofinformationbe-ingprovidedthatdoesnotappearintheconventionalacademicliterature.This“how-to-really-do-it”daywasextremelywellreceivedbytheaudience.
worKsHop “bIoInspIred nanotecHnologIes For dIstrIbUted dIagnostIcs”COST-LISTworkshop26/27April2012Theworkshopwasorganisedbythethreeorganizations:• COSTActionTD1003-Bio-inspirednanotechnologies:from
conceptstoapplications• LIST-LinköpingInitiativeinLifeScienceTechnologies• Hälsansnyaverktyg-Newtoolsforhealth
lInKÖpIng InItIatIve In lIFe scIence tecHnologIes (lIst)isanLiUCenter,focusedonthedevelopmentoffuturehealthcaresolutionsandanimportantcontributionfromLiUtotheregionalVinnovasupportedprogram“NewToolsforHealth”.ThemissionsofLISTaretostimulatetheinterestforandincreasethepossibilitiestoperformexcellentresearchonnewtechnologiesfordistributedhealthcareatLiUandtoreinforcetheimportanceoflong-termcollaborationbetweenfacultiesinthisresearcharea.TheScientificbranchofAppliedPhysicsisengagedinLISTthroughKarinEnander(parttimedirec-tor),AnkeSuska(parttimeco-director),IngemarLundström(chairpersonofthesteeringcommittee)andAnthonyTurner(memberofthesteeringcommittee). LISTactivitiesincludesupportofresearchprojects(intotal1MSEK/year)andarrangementofworkshops.In2012,LISTgrantedfinancialsupporttothefollowingprojects:• “Opticallycoupledtouchscreensforlab-on-a-chipmedical
diagnostics”;PI:DanielFilippini(IFM).• “BehavioranalysisinelderlyHFpatients”;PIs:Pierangelo
Dell’Acqua(ITN)andTinyJaarsma(ISV).• “Wearablecontactlensbiosensorswithnanoengineeredar-
chitectureatinterface”;PIs:MartinMakandAshutoshTiwari(IFM).
InApril2012,LISTco-arrangedtheinternationalLIST/COSTsymposium“Bioinspirednanotechnologiesfordistributeddiagnostics”andinOctober,seniorscientistsfromdifferentfacultiesatLiUwereinvitedtomeetinascientificspeed-datingformatwiththepurposeofformingnewresearchcollabora-tions.Thiseventturnedouttobeverysuccessfulandwillbefollowedbymorearrangementsofsimilarkind.
royal socIety oF cHeMIstry award lectUre toUrProfessorTurnerwassponsoredtopresentaseriesofAwardlecturesintheUK,IrelandandItalyduringthespringof2012culminatinginaceremonyatImperialCollege,London,atwhichhewaspresentedwiththeRoyalSocietyofChemistryTheophilusRedwoodMedalforhisoutstandingcontributiontoAnalyticalScience. ATutorialReviewbasedonthelectureswillbepublishedbytheprestigiousjournalChemicalSocietyReviews.
ap
pli
ed
ph
ys
ics
IFM actIvIty report 2012 23
ap
pli
ed
ph
ysi
cs
applied opticsstaffProfessors:HansArwin,KennethJärrendahl,ArturoMendozaGalvánAdministrative assistant: AnnaMariaUhlinAssist. professors:SergiyValyukh,TomasHallberg(external)Post docs: TorunBerlind,IrynaValyukhPhD students:LiaFernandézdelRío,RogerMagnusson,EloyMuñozPineda,ChristinaÅkerlindVisiting/diploma students:RodrigoBecerraCarrillo,EduardodeMayolo,JohanGustafson,AdamIcardi,LiaFernandézdelRío,KristoferKrus,VenkataSaiDineshSugavasi,SebastianEkeroth
Scientific collaboration (external only):M.Schubert,J.Woollam,B.Johs,Lincoln,Nebraska-ellipsometricmethodology;H.Kariis,FOI-tunablecoatings;B.Gallas,Paris-metamaterials;M.Käll,CTH-metamaterials;H.Granberg,InnventiaAB-paperoptics;V.Karpus,Vilnius-quasicrystals;R.Rehammar,CTH-carbonnanofibers;A.DeMartino,Paris-imagingellipsometry;C.G.Granqvist,UU-electrochromicthinfilms;H.Engqvist,UU-bioadsorption;L.Wågberg,KTH-cellulosefilms;V.G.Chigrinov,H.S.Kwok,HongKong–activediffractiveopticalel-ements;P.Tytarenko,Kiev-activediffractiveopticalelements;OleksandrSlobodyanyuk,KievandJ.DeSmet/H.DeSmet,Ghent–near-to-eyedisplays.
natUral pHotonIc strUctUres Opticalpropertiesofcuti-clesofseveralbeetleswerestudiedtolearnhownaturehasdesignedbiomultilayers.Figure1showaspecimenofChry-sina gloriosaviewedthroughaleft-polarizing(LPC)andright-polarizing(RPC)filter(Arwin,Fernandéz,Järrendahl,Landin,Magnusson). ThepolarizationpropertiesofthreespecimensofCotinis mutabiliswithdifferentcolorwerestudiedbyanalyzingtheMuellermatrixdataandcomplementedwiththestructurerevealedbymicroscopytechniques(Muñoz,Mendoza,Arwin,Järrendahl). BRDFmeasurementsandMueller-matrixellipsometryonCyphochchilus insulans wasperformedtoanalyzescatteringanddepolarizationproperties(Åkerlind,Hallberg,Arwin,Järrendahl).
Figure 1 Chrysina gloriosa viewed through a left-polarizing (LPC) and right-polarizing (RPC) filter.
artIFIcIal pHotonIc strUctUres Gold-silica dot arrayswereinvestigatedincollaborationwithM.Källandamodelde-scribingtheiropticalresponsewasdeveloped.Figure2showtransmissiondatafromthiskindofstructure(Mendoza,Järrendahl,Arwin).Nanostructured helical filmscomposedofInAlNnanorodswerefabricatedandanalyzedincollaborationwithJ.BirchatLiU.Left-handedandright-handedstructuresweregrown.IncollaborationwithÉcolePolytechniqueinParisimagingMueller-matrixanalysiswasperformed(Magnusson,Arwin,Järrendahl).
Figure 2 Transmission data from nano-disks
electrocHroMIc tHIn FIlMs TungstendopedNiOfilmswithdifferentcompositionswerecharacterizedbyellipsometry.DielectricfunctionsofnickeldopedWO3werestudiedintermsoftheBruggemaneffectivemediumapproximation.InhomogeneousAufilmswithmassthicknessfrom1.5to10nmonglasssubstrateswerecharacterizedbyspectroscopicellipsometry(I.Valyukh).
actIve optIcal eleMents Diffractiveelementsbasedonliquidcrystalsarestudiedwithfocusonnon-uniformalignmentcon-ditionsthatenableustoachievetheneededdistributionoftheliquidcrystalmoleculesunderauniformexternalelectricfield.(S.Valyukh).AnobjectiveLCmicro-lensarrayforadisplaylocatedattheimmediatevicinityoftheeyehasbeenproposed.Thedevelopedmicro-lensarraychangesopticalpowerfrom0toupto5000dioptresandisapromisingtechniqueforaugmentedreality.(S.Valyukh).Non-absorptiveflatthinreflec-tors,basedoncholestericliquidcrystalpolymers,withspecificspectralandspatialcharacteristicshavebeendevelopedandpatented.Amongtheareasofapplicationsareoptoelectronicsandphotovoltaics(S.Valyukh).
proteIns and cells at InterFacesIncollaborationwithHåkanEngqvist,UU,(SSFStrategicResearchCenter,MS2E)surfacesaimedforbonereplacementsareexamined.(T.Berlind).
cellUlose FIlMs and cHItIn FIlMsIncollaborationwithLarsWågberg,KTH,opticalpropertiesofcellulosefilmsandhu-midityinducedchangesarestudiedwithinsituspectroscopicellipsometry. Theopticalpropertiesofdip-coatedchitinthinfilmsarealsostudied.Chitinisasemi-crystallinebiopolymerfoundinthebeetle’scuticleasnanofibrilsinahelicallamellastructurewhichisresponsibleofthefascinatingandcomplexpolariza-tionproperties.Insituspectroscopicellipsometryisusedtostudythechangesinducedinamorphousandsemi-crystallinechitinthinfilmsbyhumidityandtemperature(Muñoz,Men-doza,Järrendahl,deMayolo,Arwin).
scIentIFIc oUtpUt 20128publications,and24conferencecon-tributionsincluding3invitedtalks.
specIal event SergiyValyukhbecamedocent(ass.Prof.).App-liedOpticswasrepresentedattheexhibitionNANO,atNorrkö-pingsVisualiserings-centershowingpolarizingscarabbeetles.
teacHIngJärrendahl,Berlind,S.ValyukhandArwinwereresponsibleformanyundergraduatecoursesandactivities.KennethJärrendahlisvicechairmanfortheEFstudyboard.
24 IFM actIvIty report 2012
applied physicsstaffProfessors:RagnarErlandsson,HelenDannetun(RectoratLinköpingUniversity),MartinHolmberg(GuestProffromSwedishNationalDefenceCollege,Stockholm,Sweden)andPenttiTengvall(GuestProffromGothenburgUniversity,Sweden)Associate professors: MatsEriksson,DanielFilippiniAssistant professor: StefanWelinKlintström(headofthedivision)Researcher: DrAnkeSuskaAdministrative staff: AnnaMariaUhlinPhD students:RogerKlingvall,ZafarIqbal,PakornPreechaburanaResearch engineers:JörgenBengtsson,JeanetteNilsson,HansSundgrenandBoThunér(labmanager)
general InForMatIonTheresearchwithintheDivisionofAppliedPhysicsismul-tidisciplinary.Themembersofthedivisionareelectricalengineers,physicists,chemists,biochemistsandbiologists.Severalprojectsareintheareasbetweenphysicsandchemis-try,andphysicsandbiology.TheprojectsareoftenconductedincollaborationwithotherdivisionswithinthethreescientificbranchesofAppliedPhysics,MaterialScienceandChemistry.Theresearchactivitiesalsoincludefundamentalmultidisci-plinaryresearch,mainlywithinthesurfacesciences.Manyprojectsarerunincooperationwithexternalcollaborators.ThedivisionishostingForum Scientium,amultidisciplinarydoctoralstudentprogrammeunderthedirectionofDrStefanKlintström.Seemoreunder“Graduateeducation”.ThedivisionalsoparticipatesintwoVINNOVA-graduateschools:Forum Securitatis,agraduateschoolinsecurityre-searchandAgoraLink,anagoraforMedicalandLifeScienceTechnologiesinLinköping.
researcH overvIew, HIgHlIgHts, and collaboratIonsTheresearchwithintheDivisionisconductedincollaborationwithmanydifferentpartsofIFMandwithlargerprogramsdescribedelsewhere.ThismeansthatsomeactivitiesaremoreextensivelydescribedatotherplacesintheActivityReport.TheresearchgroupswithintheDivisionofAppliedPhysicsareledby:• AssprofMatsEriksson• AssprofDanielFilippini• DrAnkeSuska
researcH groUp danIel FIlIppInI optIcal devIces labDanielFilippini’sgroupworksonopticalchemicalsensingmethodsanddevices.Oneimportantareaofthegroup’sactiv-ityisonphysicallyinterfacingchemicalsensingtechniquestooperateonconsumerelectronicdevices(CEDs).Theothermainresearchfocusismicrofabricationmethodsfordispos-ableopticsandfluidics.CEDssensingubiquityisrestrictedbytheavailabilityofthechemicalsensingelementandaccessoriesratherthantheCEDplatformitself.Hence,thecriticalrequirementsforcellphoneapplicationsarethedevelopmentofchemicalsensinginter-
facesdeployableatacomparablescaleandtheformulationofsolutions,whichdemandneitherpermanentmodificationsnoradditionalperipherals.Disposablelab-on-a-chip(LOC)devicescansatisfytheserequirements,ifthemeasurementprinciplecanaccommodatethedesiredanalyticalperformance.In2012,Filippini’sgroupsdemonstratedthefirstangle-resolvedsurfaceplasmonreso-nance(SPR)detectionsystemthatisbasedonasingledisposa-bledevice,whichisconfiguredtouseconditionedilluminationandopticaldetectionfromcellphones.TheSPRcouplercentraltothisimplementationiscompatiblewithregular(LOC)technologyandtemporarilyadherestothephonescreensurfaceduringthemeasurement;itcouplesandconditionstheilluminationfromthescreenanddirectstheSPRimagetothephonecamera.Afterthemeasurement,thedevicecanbedetachedanddisposedof,therebyleavingthephoneintact.SPRdetection,withindiagnosticsrange,wasillustratedwithacommercialassayforβ2microglobulin(β2M),whichisanestablishedmarkerforcancer,inflammatorydisorders,andkidneydisease,whicharerelevantcandidatesforcomplemen-tarymonitoringindecentralizedconditions.
Biacore SPR chip evaluated with a smart phone aided by a disposable optical coupler. Sensorgram of label-free β2 microglobulin detection within the diagnostics range (P. Preechaburana, M. Collado Gonzalez, A. Suska, D. Filippini, Angewandte Chemie 51(2012))
researcH groUp Mats erIKssons-senceThisisaresearchgroupwithinbio-andchemicalsensorsci-enceandtechnology.Erikssonisalsoamemberofthemanage-mentgroupofSecurityLink,astrategicresearchareaatLiUontechnologyandmethodologyforcivilsecurityapplications.“Microelectrodearraysfordrinkingwaterqualitymonitoring”isanongoingprojectfinancedbyFormasandrunning2011-2014.Inthisprojectnewsensorswithimprovedpropertiesfordrinkingwatermonitoring,suchasimproveddetectionlimitsandfasterresponsetimes,aredeveloped.Severaltypesofar-raysareinvestigatedaswellasanewtypeofprintedelectron-icsmicrobandstructure(seefigure),developedbythegroupspostdocMikhailVagintogetherwithAcreo.
ap
pli
ed
ph
ys
ics
IFM actIvIty report 2012 25
ap
pli
ed
ph
ysi
cs
Printed microband electrodes. a) The microband is produced by only two printing steps, followed by cutting. b) The current density, J, is more similar to that of a reference microelectrode than to that of a macro electrode, both in terms of size and time dependence.
ThegroupisfurthermoreinvolvedinaprojectwithintheVINNOVAprogram“Challenge-driveninnovation”.Theprojectnameis“Onlinesensorsystemforresource-efficientwatermanagement(Sensation)”,ithas23partners,isrunningduring2012-2014andiscoordinatedbyAcreo.TheroleoftheErikssongroupistoprovide“electronictonguesandnoses”foronlinewatermonitoringinfieldtests,inparticularfordetec-tionofmicrobialcontaminationsandpetroleumproducts. During2012,thePhDworkofZafarIqbalwascompletedandresultedinathesisentitled“OpticalSensingwithanOrdi-naryMobilePhone”.Thethesiscontainsseveralinvestigationsofthepossibilitiesandweaknessesofastandardmobilephoneforuseasasimplifiedandubiquitousspectrophotometricunit. During2012,wehaveinitiatedanefforttobuildupaLinköpingresearchenvironmentonrawwateranddrinkingwatermonitoringandtodevelopnewmethodsthathavethecapacitytorapidlycapturechangesanddisturbancesindrink-ingwaterproductionanddistribution.TheproposedresearchenvironmentconsistsofseveralresearchgroupsatLinköpingUniversityandatFOI.Afirstresearchapplicationforfundingwassubmittedattheendof2012.
biomolecular and organic electronicsstaFFProfessor: OlleInganäs,Associate professor:DocentFenglingZhang,docentNiclasSolinVisiting scientists: ShimelisAdmassie,HongyuZhen,YizhengJin,PingLiuPostdocs:KristoferTvingstedt(-July),KoenVandewal(-Feb),DoddahalliNagaraju,ShuyanShao,FengGao(Feb-),WolfgangTress(April-),MahiarHamedi(-Aug),DeyuTuGraduate students:ViktorAndersson(-Feb),AndersElfwing,ZaifeiMa,FredrikBäcklund,ZhengTang,JonasBergqvist,ArmantasMelianas(Sept-),EricaZeglio(Nov-),FatimaAjjan(Dec-)
Visiting students: YangZhao,ArmantasMelianas,ScottMauger,TomaszRebis,Indrė Urbanavičiūtė,BedasaAbdisa,SaiBaiAdministrators:MikaelAmlé65%,Research engineerBoThunér(27%),Diploma students:AlexanderVastesson
sUMMary:Researchinbiomolecularandorganicelectronicsisfocusedonthedevelopmentofpolymerelectronics,particularlypolymerphotovoltaics,andthecombinationofbiologicalmacromol-eculeswithsyntheticconjugatedpolymersforsupramolecularmaterialsassembly.Wepublished14papersduring2012.
bIoMolecUlar electronIcs WepublishedinSciencethefirstgenerationofbiopolymerbasedpolymerelectrodes,whereaelectronicpolymerisstoringchargeinabiopolymerwhichismodifiedtobeelectroactive.Furtherdevelopmentsofpolymerelectrodesincorporatingelectroactivebiopolymershasbeendone.Byaddingsmallqui-nonecompoundsintothebiopolymercomposites,considerableimprovementofchargedensitiesisobtained.Thesepolymerelectrodesareofrelevanceforenergystorageinsupercapaci-torsandpossiblyinsecondarybatteriesbasedonaqueouselectrolytes. DecorationofDNAchainswithmetallicconjugatedpoly-electrolyteshasbeenaccomplished.StretchedandaligneddecoratedDNAchainsactsastheconductingchannelinaelec-trochemicaltransistorgeometry,withsparselyprintedwiresconnectingtwoelectrodepads. Wehavepreparedself-assembledproteinstructuresincorpo-ratingironoxidenanoparticles.Moreover,thesehybridmateri-alshavebeenusedastestsystemsinelectrontomographymeasurements.
pHotovoltaIcsWehaveevaluatedtheanisotropyofthechargetransferstate,whichisanintermediatestateonthepathtophotocurrentinpolymer/fullerenedevices,throughmaterialsanddevicestud-iesoforientedpolymersystems. Semi-transparentsolarcellsbasedonmodifiedITOcath-odescombinedwithtransparentpolymeranodeshavebeendeveloped.Stackinganumberofthesecellsontopleadstoahigherphotocurrentthancanbeobtainedbyastandardgeom-etry,whereareflectivemetalactbothascathodeandmirror.Withthesesemitransparentsolarcells,wehavealsorecoupedsomeofthetransmittedphotonswiththehelpofanexternalmicropatternedmetalreflector,whichissuperiorcomparedtoaflatmetalmirrorinimprovingthetotalamountofabsorbedphotonsintheactivedevice. Weinvestigatedtheeffectsofpoly(ethyleneoxide)(PEO)modifiedZnOnanoparticleaselectronacceptorsinHybridSo-larCells.ComparewithreferencedeviceusingZnOaselectronacceptor,afterPEOmodification,allthedeviceparametersareenhanced.Typically,thePCEwasenhancedby42%increase.WhenZnOusedasaninterfaciallayerbetweenITOandactivelayersininvertedOSCs,thebestinvertedsolarcellsweretheonesbasedonthesmoothestZnOlayers,withthelargestD/Ainterfacialarea,andlowestZnO/activelayerinterfacialarea. WefoundthattheperformanceofinvertedOSCscanalsobeimprovedwithPEOmodifiedZnOnanoparticles(NPs)asinterfaciallayers.PEOmodifiedZnOsurfacecaneffectivelypassivatethesurfacetrapsofZnO,suppressthecombinationlossofcarriers,reducetheseriesresistance,andimprovetheelectricalcouplingofZnO/activelayer.PCEcouldbeincreasedfrom4.4%to5.7%.
26 IFM actIvIty report 2012
ap
pli
ed
ph
ys
ics
teacHIngTeachingintheundergraduatecurriculumincludedtheunder-graduatecoursesMicrosystemsandnanobiology(TB),Materi-alsandNanotechnology(TB),IntroductiontorenewableenergyandenergysavingOnePhDthesisdefence:ViktorAndersson:“Electrontomogra-phyandopticalmodellingfororganicsolarcells”Collaborations:WithChalmersUniversityforpolymermate-rials,andwithLundforspectroscopy.WithBjörnHögberg,KarolinskaInstitutetforDNAorigami.WithBeijingNormalUniversity,China,ZhejiangUniversity,China,GeorgiaInsti-tuteofTechnology,USandISE,Freiburg,Germany.FundinginthefieldofprintedorganicelectronicsandorganicnanoelectronicscomesfromSSF,throughtheprogramOPEN2008-2013.TheWallenbergScholarfundforOlleInganäshasbeeninstrumentalincreatingnovelty,andtheWallenbergfoundationfundedprojectPowerPapers,togetherwithMag-nusBerggrenatITNwillconsolidatethesenewtopics.WeheldaSwedish-Sinobilateralworkshoponpolymerphoto-voltaics,31/10-1/11,2012,IFM,LiU.WeorganizedthenationalMicroSystemWorkshop(MSW-2012)inMay2012,with≈100participants.
HIgHlIgHts
Polymer electrodes incorporating polypyrrole and lignin derivatives, coming from brown liquor formed during paper processing, enable charge storage in the quinone functions deriving from lignin. G. Milczarek and O. Inganäs, Science 335 (6075), 1468 (2012).
biosensors and bioelectronicsstaFFProfessors:Anthony(Tony)TurnerandFredrikWinquistEmeritus Professor:IngemarLundströmAssociate Professor:EdwinJagerAssistant Professors:WingCheungMak,AshutoshTiwariandValerioBeniPh.D. Students:OnurParlakandMohsenGolabi.Research Fellows:AmyGelmiandHirakPatraVisiting Researchers:DrRaeannGiffordandDrDouglasHolubVisiting Scientists:DrMasoudMehgardi,DrJannoTorop,DrAysuYarman,DrLokmanUzun,Visiting PhD Students:DanielMelling,AlinaSekretaryova,JoseLuiseSebastianAvila,MabelTorrensdelValle,LeilaKashefi,NajmehKarimian,JoseG.MartinezandRoghayedImani.Diploma/MasterStudents:NirulMasurkar,NamdiNworah,AswathiAntoAnthony,ShaliniNagabooshnam,AristideGanci,InesMoreno,NisarUlKhaliq,JennyOrban,SwapneelDesh-pandeandPrestyMathewMerna.Consultant:DrClaesNylanderManaging Editor:DrAliceTangAdministrative Staff:AnetteAndersson
general InForMatIonThedivisionofBiosensorsandBioelectronicsexpandedrapidlyduring2012,averagingaround30researchers,withtheaddi-tionofnewmembersincludingAssistantProfessor(Martin)WingCheungMak,post-docsAmyGelmiandHirakPatra,GuestResearcherDouglasHolubandPhD.StudentsOnurParlakandMohsenGolabi.EdwinJagerwaspromotedtoAs-sociateProfessor.Thebiosensorlaboratory(L202)reachedca-pacityandacomprehensivesetofequipmentwaspurchasedtosupportthegroup’sworkinkeyareassuchaselectrochemicalbiosensors,actuatorsandnano-materials.Ouroverallmissionremainsthecreationofnextgenerationbioelectronicsdeviceswithafocusondistributeddiagnostics.Morespecifically,keystrategictargetsincludefully-integratedbisosensingdevices,wearableandimplantablesensors,non-invasivediagnosticsandthecreationofnewbiomaterials.
HIgHlIgHtsbiosensors for clinical analysis:All-printed Biosensing SystemInclosecollaborationwithAcreoAB(Norrköping)andwiththeinvaluablehelpofHansSundgren(AppliedPhysics),Raeann
IFM actIvIty report 2012 27
aresupervisingavisitingstudentfromLomonosovMoscowStateUniversity(AlinaSekretaryova)fundedby“TheVisbyProgram–SwedishInstitute’sBalticSeaRegionExchangeProgram”.Alinaisworkingontwomainareas:i)thedevelop-mentofanelectrochemicalmediatedenzymesensorforthedetectionofcholesterolandtheii)characterisationofnovelmediatorsforoxidase-basedbiosensors.
Cell microencapsulation and monitoring: towards cell therapy Deliveryofstemcellstotargettissuesfortissueregenera-tionisextremelychallenging.Stemcellmicroencapsulationprovidesanewstrategy,whichmayimprovetheeffectivenessofcelldeliverytothetargettissuebycreatingasemi-permeablecontainerseparatingtheencapsulatedcellsandtheenviron-ment.Inparallel,monitoringoftheencapsulatedcellsinsidethemicrocapsuleenvironmentisimportanttooptimisethemicrocapsuleconstructdesignandtherapeuticefficacy.WehaveinitiatedcollaborationwithIGENonintegratedstem-cellencapsulationandmonitoringfortrackingthewell-beingoftheencapsulatedstemcellsforcelltherapy.Masterstudent,InésMorenofromCranfieldUniversity(UK)isbeingsupervisedbyWingCheungMak,todevelopencapsulationtechniquesbasedonhydrogelmaterialsandtoperformcellmonitoringwithinmicrocapsules.Thefocusisoncontrollingandmonitoringproliferationofstemcellswithinmicrocapsulesandtestingen-capsulatedHumanUmbilicalVeinEndothelialCells(HUVEC)foruseasacardiacpatchforheartmuscleregeneration.
Nanobioreactors, stimuli-responsive and intelligent carrier/scaffolds for bioelectronics, drug delivery, imaging and tissue engineeringSwedish Research (VR) Council (2012-2016) 4m SEKInadditiontoournanobioreactorworkdecribedintheprevi-ousreport,temperature-,pH-,magneto-andphoto-switchablenanomaterialsarebeingintegratedintohigh-orderdignosticdeviceswithswitchablebioelectronicsandmodulatedbiochem-icalprocessing.Reversibleimmunosensorshavebeendesignedforthecardiacinjurymarker,troponin,usingbothantibod-iesandmolecularly-imprintedpolymers.Thesebiomimeticbiosensorsserveasamodelforthedesignofotheraffinitysensorsforcardiac,geneticandinfectiousdiseases.Wearealsoexploringtheuseofthesesmartmaterialsfortargeteddrugde-liveryusingsmartnanocarriersinconjunctionwithmagneticresonanceimagin(MRI)andexploitingtheirhyperthermicpropertiesfortumortreatment.Stimuli-responsivepolymericunimolecularmicelles,formedfrompH-andtemperature-responsiveblockcopolymers,provideauniquecore-shellarchitecturewhereinthehydrophobiccoreservesasanaturalcarrierenvironmentforhydrophobicdrugsandthehydro-philicshellallowsparticlestabilisationinaqueoussolution.Ametalliccorecanalsobeintroducedintotheparticle,endowingtheparticlewithoptical,magneticorhyperthermicproperties.Thesenovelmicelleswillcontainthreekeycomponents:(i)achemotherapeuticagentdoxorubicinthatwillbereleasedfrompolymericmicellesthroughapH-dependentmechanism;(ii)abiologicalligand,i.e.,specificaptamerthatcantargettumorcellsandsubsequentlyinducereceptor-mediatedendocytosisforcelluptake;and(iii)ametalliccoreforultrasensitiveMRIorhyperthermicproperties.
GiffordandTonyTurnerrealisedafirstdemonstratorofanall-printedbiosensingsystem,wherenotonlyistheampero-metricsensorprinted,butalltheassociatedelementssuchasbattery,displayandcircuitryareprintedonasinglesheetofPETandthenlaminatedinanappropriatecasing.Thepicturebelowshowstherealitytodate,aprototypefunctioningsystem.Glucoseconcentrationcanbemeasuredinafewsecondsandobservedviatheprinteddisplayusingthisdevice,poweredbyaprintedbattery.Rudimentarysiliconcircuitrycanbeseentotherightofthepicture,butthiscouldbereadilyintegratedintoatiny,inexpensivesiliconchip.Thisdeviceisbeingusedasaconceptdemonstratortodeveloparangeonnewproducts,principallyformedicaldiagnostics.
Wearable Contact Lens Biosensors with Nanoengineered Architecture Interface.LIST (2012-2013), 350k SEKThisinterdisciplinaryprojectbridgesresearchactivityintheBiosensorsandBioelectronicsCentreonwearablebiosensorsfornon-invasiveoculardiagnosticsandworkattheIntegrativeRegenerativeMedicine(IGEN)Centreoncornearegenerativemedicineforinfection-associatedcornealtransplantrejection.Ocularfluidisanextracellularfluidexcretedfromtheteargland.Withrecentadvancesinproteomictechnology,severalimportantbiomarkersfromocularfluidhavebeenidentifiedhavingsignificantclinicaldiagnosticvalueforvariousdiseases.Thecontactlensisdisposable,relativelycheapandservesasaplatformtoobtaindirectintimatecontactwithocularfluid,whichisanattractiveandapromisingplatformfornon-inva-sivediagnostics.WithsupportfromLIST,MastersstudentJen-nyOrbanisbeingsupervisedbyWingCheungMaktodevelopsurfaceengineeringtechniquesintegratingabiorecognitionlayerontocontactlenssurfaces.Thisexploratoryprojectwillserveasafoundationforthefuturedevelopmentofwearablebiosensors.Ourlong-termgoalistodevelopsimple,inexpen-siveandnon-invasivecontactlens-basedwearablebiosensorsforrapidscreeningofdifferentpotentialhealthriskfactorsinocularfluid.
Enzyme sensorsSwedish Institute (2012-2013), 64k SEKAkeytopicforthegroupisthedevelopmentoflow-costdispos-ablebiosensorsforclinicalanalysis.InclosecollaborationwithMikhailVagin(AppliedPhysics),ValerioBeniandTonyTurner
ap
pli
ed
ph
ysi
cs
28 IFM actIvIty report 2012
bIosensors For envIronMental analysIs:Salmonella typhimurium S. typhimuriumhasbeenidentifiedbytheWHOasthemostcommonsourceoffood-borneillnessworldwide.Traditionally,microorganismsaredetectedandquantifiedbycultureandcolonycount;thisistimeconsumingandrequireswell-estab-lishedlaboratoryfacilities.Inanefforttoreduceanalysistimeandcosts,andtomovetoon-siteanalysis,ValerioBeniiswork-ing,incollaborationwiththeNanobioengineeringgroupattheInstituteforBioengineeringofCatalonia(IBEC),Spain,onthedevelopmentofelectrochemicalaptamer-basedbiosensors.Aspartofthiscollaboration,JoseLuiseSebastianAvila(PhDstudent)visitedLinköpingUniversityforfourmonths.Fundedby“TheMinisteriodelaCienciadeEspana”,hedesignedandtestedaseriesofdifferentassayformatsusingaptamersasrecognition/captureelementswithenzymaticlabelsforelectro-chemicaldetection.
Kanamycin AContaminationofaqueousenvironmentswithpharmaceuticalresidueshasanimportantimpactontheenvironmentandonhuman/animalhealth;thepresenceofantibioticscanpromote,forexample,multi-drugresistanceinpathogens.Withtheaimofimprovingwaterquality,wearedeveloping,incollabora-tionwiththeworkinggroup“Biologicalon-sitemeasuringMethods”attheHelmholtzCentreforEnvironmentalResearch(UFZ)inLeipzig,Germany,anelectrochemicalaptasensorfortherapidscreeningofKanamycinAinwater,.Thiscollabora-tionwasgeneratedaspartoftheCOSTactionTD1003onBioinspiredNanotechnologies.Theelectrochemicalbiosensortookadvantageoftheabilityoftheaptamer,selectedatUFZ,toundergoacompetitioneventbetweenthetargetandanon-surfaceimmobilisedprobe.Electrochemicalmonitoringoftherecognitioneventisperformedbytheuseofelectrochemicalimpedancespectroscopyorbythevoltammetricmonitoringofthepresenceofaredoxcentre(Methyleneblue)syntheti-callyintroducedatoneendoftheaptamer.TheprojectwassupervisedbyValerioBeniandcarriedoutbyAristideGanci,avisitingMasterstudentfromCranfieldUniversity(UK)andisbeingcontinuedbyPrestyMathew,aLiUMasterstudent.
Bioelectronics:PhDstudentMohsenGolabiisinvestigatinganovelconceptbasedonsurfaceinteractionstodetectandidentifydiffer-entstrainsofbacteria.Werecentlyexpandedthisprojecttoincludequorumsensingmolecules,incollaborationwithDrElenaVikströmandProfKarl-EricMagnussonatthedivisionofMedicalMicrobiologyatcampusUS.Aprojectdevelopingelectroactivefibrescaffoldsforincreasedstemcelldifferentia-tion,incollaborationwithDrMehrdadRafatatCampusUS,hasgainedimportantmomentumfromanIGENgrant.AmyGelmijoinedtheteaminOctoberthisyearasapostdoctodevelopthesenovelfibre-basedscaffolds.Wehaverecentlyfab-
ricatedthefirstfibrematsandareinvestigatingthebiocompati-bilityoftheelectroactivesurfaces.Initialresultsarepromising.Guestresearcher,DouglasHolub,startedworktoinvestigatesynthesisconditionsforelectroactivematerialsforthestemcelltherapyproject,whichwasmadepossiblebyaLiU“U”grant.
Poly(dl-lactide-co-glycolide) fibre scaffold.
Polymer actuators:Wearecurrentlyworkingonnewmaterialsdevelopment,micromechanicalstimulation,microroboticsandnovelactuatordesigns.Wehavedevelopednovelpolypyrrole-basedactuatormaterialstoinvestigatetheroleofcrosslinkingintheactuationmechanism.DanielMellingfromCranfieldUniversity,whoEdwinJagerexternallysupervisedduringhisPhD,continuestovisittheBiosensorandBioelectronicsCentreasapartofthisproject.WehaveacollaborationwiththeItalianInstituteofTechnology,CenterforMicro-BioRobotics,inPontedera,Italy,developingallpolymersoftactuatorsandnewbioinspiredpro-pulsionschemes.AsapartoftheongoingcollaborationwiththeIntelligentPolymerResearchInstitute(IPRI),atUniversityofWollongong,Australia,EdwinJagervisitedIPRIduringthesummerof2012tocontinueworkonmicrofabricatingnewsoftactuatorsthatworkinair.InparalleltwoMScstudents,NnamdiFelixNworahandNirulMasurkar,workedonthisprojectatLiU.Wesuccessfullydemonstratednewfabricationandinterfacingmethodsandapaperhasbeensubmitted.AsapartoftheCOSTMP1003,Dr.JannoToropworkedonnovelPPyhybridmaterials.ThisworkresultedinaCarlTryggerStif-telsengrantandhewilljointhegroupaspost-docin2013.AsecondSTSMwasperformedbyJoséMartinez,avisitingPhDstudentfromtheUniversityofCartagena,Spain.Hestayedinthegroupfor3monthsutilisingourspecialisedlaserscannermicrometerformeasuringthevolumechangeofPPyasapartofthemodelingworkonPPyactuation.
MaterIal/sUrFace scIence:Highly stable surface chemistry for genosensorsAspartofalong-standingcollaborationwiththeUniversitatRoviraIVirgili,PhDstudentMabelTorrensdelVallecametovisittheCentretoinvestigatetheuseofmicro-contactprint-ingandaryldiazoniumsaltassemblyforthepreparationofahighlystablesensingsurfaceforgeneticanalysisofpathogens.Anovelapproachbasedonthecatalyticactivationofthearyldiazoniumsaltswasdevelopedallowingspontaneousstablegraftingofaryldiazoniumsaltondifferentsubstratessuchascarbon,Au,PtandPDOT.Thesurfaceshadhighchemicalsta-bilityandweresuitable,followingtheimmobilisationofDNAprobes,forelectrochemicalgenosensing.CharacterisationofthepreparedsurfacesiscurrentlyongoingincollaborationwithDrJohanHurtig(MolecularPhysics).Theuseoftheap-proachforthefunctionalisationofsiliconcarbideandgrapheneisalsounderinvestigationincollaborationwithGraphensic.
ap
pli
ed
ph
ys
ics
IFM actIvIty report 2012 29
Automatic synthesis of plastic antibodiesArecentpaperinAdvanced Functional Materials(Pomaetal.)describesanautomaticsolid-phasephoto-reactordevelopedincollaborationwithCranfieldUniversity(UK).Atthecoreofthereactorisanimmobilisedtemplate,whichcanbeasmallmolecule,peptideorwholeprotein.Thisensuresthatsurface-confinedimprintsareformedonlyononefaceofpolymernanoparticlesandthatthetemplatecanbereusedforthesyn-thesisofsubsequentbatchesofimprintedpolymer.Thereactorintegratestemplate-directedsynthesiswithaffinityseparation,acombinationwhichensurestheproductionofmonoclonal-typemolecularly-imprintednanoparticles.Batchesof100mgofparticlescanbeproducedineachsix-hourcyclewithtemplatesincludingmelamine((KD=7x10-10M),vancomycin(KD=1.9x10-10M),amodelpeptide(5.5x10-12M)andvariousproteins(KD=10-11-10-9Mfortrypsin,pepsin,amylase,peroxidase).AffinitymeasurementswereobtainedusingaSPRsensor(Biacore3000).
Thisgenericapproachtotheautomatedsynthesisofpoly-mernanoparticlesprovidesmaterialof”monoclonal”qualityproducedinaconsistentandreproduciblemanner,suitableforuseasadirectreplacementforantibodiesinavarietyofap-plications.Itoffersspeedofsynthesisandmultiplebatchesofpolymernanoparticlescanbeproducedin24hundercontinu-ouscomputercontrol.Templatere-useandin-builtaffinityseparationalsoensureconsistent,economicandhigh-qualityproduction. Anotherrelativelynewimprintingapproachthatisparticu-larlyusefulforelectrochemicalsensorsuseselectroploymerisa-tionofathinfilmoftherecognitionelementdirectlyonthesensorsurface.Theabilitytopreciselycontrolthethicknessofthelayerandthefactthatitisgeneratedinsitu,makesthisanattractivealternative.Insofarunpublishedwork,weshowedthatatroponinsensorcouldbepreparedbyelectropolymerisa-tionofo-phenylenediamineonagoldelectrodeinthepresenceoftroponinasatemplate.Measurementswereperformedinthepresenceof5mmoll−1K3Fe(CN)6andthecurrentgener-atedwasinverselyproportionaltotheanalyteconcentration,sincethemeasurementdependsonocclusionoftheelectrodesurfacebythetemplate.Theresultingmolecularly-imprintedtroponinbiosensorcouldbeusedtodetectcardiacinjury,of-feringbenefitsintermsofcosteffectiveness,storagestability,sensitivityandselectivity.
teacHIngTheBiosensorsandBioelectronicsdivisionhasgreatlystrengtheneditsroleineducationduring2012bydesigningandgivingaseriesofcourses,comprisingtutorials,lecturesandpracticalclasses.Thedivisionrunskeycoursesintheareaofbiosensorsincluding:Introductiontobiosensortechnology(TFYA62–ValerioBeni),dedicatedto2ndyearstudentsoftheBiomedicalEngineeringbachelordegreeandtheadvancedMasterscourse“BiosensorsTechnology”(TFTB34–FredrikWinquist).EdwinJagerpresentedseverallecturesforMi-crosystemTechnologyandNanobiology(TFTB33),BiomedicalMaterials(TFTB40)andthePhDcourseOrganicElectronicsandTonyTurnerdeliveredanumberofguestlecturestoLiUstudents.Thegrouphasalsobeenengagedatvariouslevelsinthedesignofnewcourses,mainlyatPhDlevel,thatwillrunfrom2013.Theseinclude:“ColloidsandInterfaces”(WingCheungMak)andIntegratedNanomaterialsandMedicalDevices’(AshutoshTiwari).Moreoversomeofthegrouphavebeenalsoinvolvedindesignofthecourse“ExperimentalElec-trochemistry/ElectroanalyicalMethods”,aneffortledbytheBiomolecularandOrganicElectronicsgroup.FinallythegrouphasbeenactivelyinvolvedinthedesignofCDIOprojects(TFTB36andTBMT41).
ap
pli
ed
ph
ysi
cs
30 IFM actIvIty report 2012
ap
pli
ed
ph
ys
ics
biotechnologystaFFProfessor (head of division): Carl-FredrikMandeniusProfessor (adjunct):JohanHyllnerAssociate Professor:GunnarHörnstenResearch engineer/Lab manager:RobertGustavssonPostdoctor:MichaelFritzschePhD students: GunnarBergström,IngaGerlachResearch engineer/project:JonasCristofferssonMaster students:CorneliaLukasser,ChristopherDarkins,DanPaulsson,RobinTaponenAdministration:SusanneAndersson/AnnaSundin
sUMMaryTheresearchandeducationatthedivisionofbiotechnologyfocusonindustrialapplicationsofbiotechnology.Inessence,industrialbiotechnologyistheintegrationofengineeringandbiologyforproductionpurposes.Thescientificbreakthroughsoftheseventiesandeightiesinmoleculargenetics,whichre-sultedintheindustrialproductionofrecombinantproteinsinmicrobialandanimalcellcultures,arenowfurtheredbynewproductssuchasstemcells,therapeuticantibodiesandgenetherapyvectors.Anumberofbioengineeringtoolsarecurrent-lyexploitedbasedongenetic,protein,metabolic,physiologicalandorganengineeringinordertoimproveproductioncapac-ityofproteins,metabolites,andcells.Itisaprimetaskforthecurrentbiotechnologyresearchtointegrateanddevelopthesetoolsinordertoachieveandoptimizenewandbetterindustrialapplications.ThebiotechnologydivisionatIFMiscontribut-ingtothisbyinventinganddevelopingnovelanalyticalmeansthatcanprovidebetterinsightsintothebiologyofindustrialproductionsystems.Thecross-disciplinaryenvironmentofLinköpingUniversityfurnishesuniqueopportunitiesforthis.Thecombinationofsensortechnology,mathematicalcomputa-tionmethodsandproductiondesign,supportstheuseofnewapproachesthatenhancetheunderstandingandallowfurtheroptimizationofthebio-industrialproductionsystems.TheintegrationofthesetopicsinthecurriculaoftheEngineeringBiologyprogramformsanimportantlinkbetweeneducationandresearchatthedivision.OurPhD-studyprograminbio-technologyisdirectlyconnectedtotheresearchofthedivisionandisapartoftheresearchthatishighlightedbelow.
HIgHlIgHtsJohan Hyllner new adjunct professor JohanHyllner,formerCEOofthestemcellcompanyCellartisisnewadjunctprofessorincellengineeringatthedivision.CellartiswasrecentlyacquiredbytheFrenchbiotechcompanyCellectis,aworldleadingcompanyinthestemcellbusiness.
Johan Hyllner, new adjunct professor in engineering biology, especially cell engineering
new eU proJect on IndUced plUrIpotent steM cells (steM-bancc)Thedivisionhastogetherwith40partnersreceivedafiveyearIMIproject–STEMBANCC-oninducedpluripotentstemcells. Theaimoftheprojectistogenerateandcharacterise1500highqualityhumaninducedpluripotentstem(iPS)celllinesthatcanbeusedbyresearcherstostudyarangeofdiseases,includingdiabetesanddementia,andtestfordrugefficacyandsafety.Thecelllineswillhelptoimproveandspeedupthedrugdevelopmentprocess,andensurethatpatientsbenefitfrommoreeffectiveandsaferdrugs.Mandeniusistheleaderoftheinvitroassaydevelopmentintheproject.
The STEMBANCC project
new proJect on lab on a cHIp For toxIcIty testIngTogetherwiththegroupofDrNateRobinsonatIFMwestudynewdesignsofLabonaChipfortoxicitytesting.TheprojectissupportedbytheSwedishResearchCouncilprogramforreduc-inganimaltesting.
soFt sensors For bIoprocess MonItorIng and controlSoftsensorsarerobuston-linesensorssupportedbymath-ematicalmodelsderivedfromthesystemsunderstudy.Inparticular,theyareusefulforbioprocessmonitoringduetothecomplexityofthebiologicalmechanismsoftheproducingcells.Wehaveusedsoftsensorstomonitorphysiologicalsig-nalsfromtypicalindustrialculturesbycombiningsensorsforbiomass,effluentgasesandkeymetaboliteswithbasicmassbalancesandkinetic(GustavssonandMandenius,BioprocessBiosystemsEngineering,2012).Also,aconferencetalkwasgivenbyRobertGustavssonatthe15thEuropeanCongressofBiotechnologyinIstanbul.
Soft sensor setup for control of GFP production
bIoMecHatronIc desIgn In bIotecHnologyIncollaborationwithIEIatLiUwehavecontinuedstudiesontheindustrialdevelopmentanddesignprocessofcomplexbiotechnologyinstrumentsanddevices.During2012wehavefollowedupthistopicwithseveralnewresearcharticlesandconferencetalk(seepublicationlist).
IFM actIvIty report 2012 31
ap
pli
ed
ph
ysi
cs
Conceptual design solutions from a biomechatronic approach
vIrtUal bIoreactor traInIngIncollaborationwiththeUniversityofAppliedScienceinBremen,andwithsupportfromPUGatthetechnicalfaculty,wehavecontinuedtodevelopnewvirtualtools.Oneoftheseisavirtualbioreactorthatmimicstheoperatorenvironmentinabiotechproductionplant.Itallowstheengineeringstudentstoapplymonitoringandcontrolmethodsinahands-onfashion.Thegoalistostrengthenthelinkbetweenengineeringtheoryandpracticewiththeaimtomakethestudentsbetterpreparedforprofessionallife.
A virtual bioreactor used for training master students in engineering biology
edUcatIonThedivisionhasduring2012deliveredthreeadvancedlevelcoursesintheEngineeringBiology/ChemicalBiologypro-grams(IndustrialBiotechnology,6hp;Bioprocessdesign,6hp;andBioprocessmanufacturing,6hp)andexaminedseveraldiplomaworkthesesinbiotechnology.
Molecular physicsstaFFProfessors: BoLiedberg(onleave),MayGriffith.Associate professors: ThomasEderth(actingheadofdivision),KarinEnander.Assistant professors:DanielAili,JohanHurtig.Post-docs: LiBuayKoh,JaywantPhopase,LuigiPetrone,StaffanDånmark.PhD students:EmmaEricsson,Hung-HsunLee,ErikMartinsson,RobertSelegård,Feng-ITai,MattiasTengdelius,AbeniWickham,WetraYandi,ChristopherAronsson,CamillaSandén,MohammadJavadJafari.Visiting scientists: RamunasValiokas,AlexanderOnipko,SushanthGudlur.Administrative and technical staff:ThereseLindkvist,AnnaMariaUhlin,BoThunér.Guest professor: AtulParikh,UC-Davis
2. sUMMaryThedivisionofMolecularPhysicsconductsfundamentalandappliedresearchinthreecloselyrelatedfieldsofbiologicallyinspiredsurfaceandnanoscience:Biosensingandbiochiptech-nology;molecular/polymerthinfilmphysicsandspectroscopy;andnanoscalephysics/chemistry.Thefundamentalpartofthebiosensingandbiochipresearchisdevotedtothedesignandsynthesisofsurfaceactivecom-poundsandnewbiorecognitionmolecules.Polypeptideaswellascarbohydraterecognitionmoleculesaresynthesizedandevaluatedusingtheabovementionedtransducerplatforms.Wearealsoworkingwithdenovosynthesizedhelix-loop-helixpoly-peptidesandminimizedsequencepeptidesformicroarrays.Asignificantportionoftheresearchutilizessolutionself-assemblytechniquestoproducenovelsurfacearchitecturesandmaterials.Anewtypeofoligomericmonolayersformsthebaseforourinvestigations,andthroughafruitfulcombinationofsurfacevibrationalspectroscopyandquantumchemicalabinitiocalculationswehaveimprovedtheunderstandingofthemechanismsthatinfluencethephasebehaviourandorienta-tioninsuchlayers.Severalprojectsutilizenanoparticleplasmonicsforsensingapplications.Weareparticularlyinterestedinusinggoldandsilverparticlesforstudiesofmetal-enhancedopticalphenom-enasuchasmetalenhancedextinction(MEE)ormetal-en-hancedfluorescence(MEF),orusinglocalizedsurfaceplasmonresonance(SPR)forimprovedimaging.Someofthesepro-jectsarecarriedoutwiththeSchoolofMaterialsScienceandEngineering,NanyangTechnologicalUniversity,Singapore.Theplasmonicresearchalsorelatesalsotoouractivitiesonhelix-loop-helixpolypeptidesforcontrolledaggregationofgoldnanoparticles(NPs)intofunctionalentities.Ourlong-standingresearchonantifoulingsurfaceshassomewhatshiftedfocusfrombiomedicaltomarinebiofoul-ingapplicationsoverthelastfewyears,andisnowconductedprimarilythroughourinvolvementintheMarieCurieInitialTrainingNetworkSEACOAT.Thenetworkinvolvesresearchinthreecomplementary,interdisciplinarythemes:surfaceengineering,surfaceanalyticsandbioadhesion.Animportantpartofourresearchinmarinebiofoulingisthedevelopmentofreal-timemethodsformonitoringofsurfaceinteractionsof
32 IFM actIvIty report 2012
marineorganisms.Forthispurpose,arecentlyacquiredlaser-TIRFmicroscopewithanintegratedimagingSPRfacilitywillbeofgreatimportance. TheMolecularPhysicsdivisionisdeeplyinvolvedintheini-tiativeonRegenerativeMedicineheadedbyProfMayGriffith,andwhichisnowinitsthirdyear.Thelaboratoriesforpolymerscienceandpeptidechemistryatthedivisionserveotherpart-nersintheprojectwithnewmaterialsandmolecules,andalsoprovideadvancedtoolsforthecharacterizationofthedevelopedmaterialsandimplants,thuscontributingtoaconcertedefforttomaketranslationaltechnologies(bench-toptobed-side)areality. Staffatthedivisionarealsoinvolvedinundergraduateteach-ing,givingadvancedcoursesonsurfaceandsupramolecularchemistry,spectroscopyandbiomedicalmaterials. DanielAiliwasrecruitedasaLiU-Forskarassistentin2011andhasduring2012receivedextensivefundingfromboththeSwedishFoundationforStrategicResearch(IngvarCarlssonAward)andtheSwedishResearchCouncil(VR)topursueresearchonresponsivehybridmaterials,leadingtoaconsider-ableexpansionofthedivisionoverthelastyear.AiliwasalsoawardedtheAkzoNobelNordicPrizeinSurfaceandColloidchemistry.
3. HIgHlIgHtschelation assisted photoimmobilization – a novel route to covalent, oriented protein immobilizationKarin Enander, Bo Liedberg, PhD student: Emma Ericsson. Anoveltwo-stepmethodforhomogenousorientationandcovalentattachmentofHis-taggedproteinstosensorsurfaceshasbeendeveloped,whereachelatingagent(nitrilotriaceticacid,NTA)capturestheproteininanorientedfashionfollowedbycovalenttetheringbythereactionwithaphotolabilegroup(benzo-phenone,BP).Thestrategywasdemonstratedongoldsensorsurfaceswithmixedself-assembledmonolayersofNTA-andBP-presentingalkanethiolates.Althoughhomogeneousligandorientationislesscrucialforanalyteaccessibilityinthecaseofmultivalentligands,thisstrategymayproveveryusefulformonovalentligand-analyteinteractions,offeringawell-definedmodeofimmobilizationsuitableformicrochipphotopattern-ingapplications.
detailed molecular characterization of thrombin-par4 interactionsKarin Enander, PhD student: Robert Selegård. InarecentlyformedcollaborationwithProfTomasLindahlandDrSofiaRamström(LaboratoryforClinicalChemistry,DepartmentofClinicalandExperimentalMedicine,LiU)weusesurfaceplas-monresonance-basedanalysistocharacterizelow-affinityinter-actionsbetweenthrombinandpolypeptidescorrespondingtotheextracellularloopsofthehumanPAR4receptorexpressedonplatelets.Ourambitionistomapsitesinboththrombinandthereceptorthatcontributetotheinteraction,whichiscrucialforplateletactivationduringbloodcoagulation.
Interfacial charge and swelling of layered polyelectrolyte hydrogel gradientsThomas Ederth. PhD student: Feng-I Tai. Hydrogelpatternsandgradientsareofimmediateinterestforbiochipandproteinarraytechnology.Insandwichedthicknessgradientsofanionicandcationicpolymers,chargeneutralregionsareveryresistanttonon-specificproteinadsorption.Wehavepreparedtwo-componenthydrogels(Figure1)withachargeduniformbot-tomlayer,anoppositelychargedthicknessgradientisgrafted.ThelocationofthechargeneutralregionalongthegradientdependsonthepH,anddirectforcemeasurementsusinga
chargedcolloidalprobeisusedtostudythecomplexswellingbehaviourofthehydrogelsandmonitortheshiftofthismini-mumasthepHischanged.
Figure 1. Top: schematic of a two-component hydrogel gradient. Below: AFM force curves obtained using a negatively charged probe on a P(AEMA-CEA) gradient, showing re-location of the charge-neutral region.
lipid membrane architecturesJohan Hurtig.FundsfromtheMagn.BergwallandCarlTryg-gerFoundationshavepermittedacquisitionofafluorescencemicroscopewithanultrasensitivecameradetector.Thisisusedinprojectsrelatedtocontrolofdirectionalgrowthofintercel-lularnanotubesthroughmicropatternedsubstratesaswellasnanosurgicalextractionofcellmaterial.Theinvestigationofintercellularnanotubesisbasedonaninterdisciplinaryap-proachbetweenmicrofluidicsamplehandling,nanopatternedsubstratesandsensitivedetectiontechnologiestoprobeaneweukaryoticcell-cellcommunicationstrategy.
Mechanisms for lysosomotropic destabilization of membranesThomasEderth,PhDstudent:TimmyFyrner.Lysosomesarevesicularorganellesfoundinvirtuallyalleukaryoticcellsandareinvolvedinmacromoleculeturnoverandthuscontainnumeroushydrolyticenzymes,digestingunwantedmate-rialinthecell.Lysosomesarealsoinvolvedinapoptosis;thelysosomalmembraneispermeabilizedinresponsetocelldeathstimuli,althoughthemechanismsbehindthisarepoorlyunderstood.IncollaborationwithKarinÖllinger(FacultyofHealthSciences,LiU),andAtulParikh(UCDavis)weinvesti-gatemechanismsforlysosomalmembranedestabilizationbynaturalandsyntheticlysosomotropicdetergents.
local refractive index sensing based on metal nanostructuresBo Liedberg, Daniel Aili, PhD students: Erik Martinsson. Wedevelopopticalbiosensorsbasedondetectionofsmalllocalrefractiveindexchangesinthevicinityofmetalnanostruc-tures.IncooperationwithagroupattheSchoolofMaterialsScienceandEngineering,NanyangTechnologicalUniversity,Singaporewehaveexploredthebulkandsurfacerefractiveindexsensitivityofcore-shellAg@Aunanoprisms,findingthatthesearemuchmoresensitivetolocalrefractiveindexchangesthanbothconventionalsurfaceplasmonresonanceaswellassphericalgoldnanoparticles(Figure2).Weaimtointegratethesenanostructuresassensingelementsinopticalbiosensorsinordertomonitorbiomolecularreactionsoccurringintheproximityofthenanostructures.
ap
pli
ed
ph
ys
ics
IFM actIvIty report 2012 33
Figure 2: A comparison of surface refractive index sensitivity between core-shell Ag@Au nanoprisms, conventional SPR and spherical Au nanoparticles.
peptide-polymer hybrid materialsDaniel Aili, Post-doc: Staffan Dånmark, PhD student: Christopher Aronsson.Wedeveloppeptide-andpolymerhybridsforself-assemblyofhydrogelswithwell-definedandtunablepropertiesforbiomedicalapplications.Thepeptidesaredesignedtofoldintocoiled-coilheterodimerswithhighstructuralintegrity,lowKDfordimerization,andcontrollable/tunableassembly-andoligomerization-properties..Thepeptidesaremodifiedtopromotepolypeptidefiber-formationbutcanalsobecovalentlyattachedtopolymerscaffoldsbasedonhyaluronicacidandpolyethyleneglycol.Polymerscaffoldsarecurrentlybeingmodifiedforconjugationwiththepeptides.
Figure 3. Circular dichroism spectra of non-linear peptide monomers (1 and 2) and the folded heterodimer (3).
self-assembly of anisotropic nanostructuresDaniel Aili, Karin Enander, PhD student: Camilla Sandén.Theaimofthisprojectistodevelopwell-definedandbiocompatiblena-noscalecomponentsformodularself-assemblyofanisotropichybridmaterialsusingreconstitutedhigh-densitylipoprotein(rHDL)asasupramoleculartemplate.TherHDLisfunction-alizedtospecificallyassociatewithgoldnanoparticlesandtoformwell-definedanddiscretenanostructureswithinterestingandusefulopticalproperties.ThesynthesisofrHDLhasbeenoptimizedandseveralstrategiesforfunctionalizationandas-semblyofthenanostructureshavebeenevaluated.
regenerative Medicine
LinköpingIntegrativeRegenerativeMedicineCentre(IGEN),fundedbyLiUandtheCountyofÖstergötland,enablesmulti-disciplinaryteamstoworktogethertodevelopboldinnovativetreatmentmethodsthatwillrestorefunctiontodamagedordiseasedorgansandtissue.TheactivitieswithinregenerativemedicineatIFMincludedesignandpreparationofnewbio-materialsandbioactivemolecules,andprovisionofadvancedtoolsforthecharacterizationofthedevelopedmaterialsandimplants.
collagen-based scaffolds and hydrogelsMay Griffith, PhD student: Abeni Wickham. Alargefocusisondevelopmentofdifferentstrategiesforcollagenscaffoldformation.Wearenowabletomakethecollagenandcelluloseasahydrogel(90%water),collagenelectrospunfibers,andhighlydensecollagenmeshes(5%water).ThelattermaterialisverysimilartotheApligraf®usedforwoundtreatmentandhasnowbecomethematerialemphasisforthecollaborationwithLinköpingUniversityHospital’sburnunit.Incollabora-tionwithProfJuanScaianoandDr.EmilioAlarconofOttawaUniversity,silvernanoparticle/collagencompositeshavebeendevelopeddemonstratingexcellentantibacterialactivity.Thejointworkwithgroupssupplyingelectroactivepolymersstillcontinuesandmotionsareunderwaytomovethosematerialsintoproperanimalmodels.
Figure 4. Frontal (top) and transverse (bottom) planes of highly dense col-lagen meshes made from plastic compression.
cell response regulation on collagen surfaces with patterned peptidesMay Griffith, Bo Liedberg, PostDocs: Li Buay Koh, Jaywant Phopase. Theaimofthisresearchistostimulateanenhancedgrowthofcellsforclinicalapplicationsasbiomimeticcornealsubstitutes.Micropatternsoflaminin-derivedcell-adhesivepep-tides(YIGSR-NH2andIKVAV)withvaryingdimensionsweregraftedontoacollagenlayerandsubsequentlyseededwithvari-ouscelltypestoinvestigateforthecellresponses.Ourresultsshowedtheattachment,alignmentandproliferationofhumancornealepithelialcellsonthepatternedsurfaceswithIKVAVasshowninFig.1.Currentstudieswhichinvolveothercelltypes(e.g.neuroblastomaandstromalcells)andinvestigationonthecellsproliferationrateonthesemodifiedsurfacesisongoing.
ap
pli
ed
ph
ysi
cs
34 IFM actIvIty report 2012
Figure 5. a) Attachment of the human corneal epithelial cells on the grafted patterns with IKVAV at 6 hrs and b) cells proliferation along the peptide pat-terns at 48 hrs with live dead staining of the cells.
development of template-assisted supramolecular assembled collagen-Mimetic HydrogelsMay Griffith, Bo Liedberg, Jaywant Phopase.Ourobjectiveistodevelopdesignerscaffoldsusingpolymericmultiarmtemplatesconjugatedwithcollagen-mimeticpeptides(CMPs)whichcanself-assembleintocollagen-liketriplehelicalnetworks.Collagenformsthebasicscaffoldingofvirtuallyeveryorgan,butissusceptibletoenzymaticdegradation.ThiscanbecircumventedbyCMPswiththedesiredpropertiesofcollagenbutwhosestabilitycanbecontrolled.ACMPcon-jugatedwith8-armPEGmaleimidetemplateformsaself-supportingtransparenthydrogelsuitableforcornealimplant.Thehydrogelsupportedthegrowthandproliferationofhumancornealepithelialcellsandhasshownsignificantlyhigheren-zymaticstabilitycomparedwithEDC/NHScross-linkedhumanrecombinantcollagenhydrogels,currentlyinphase-2humanclinicaltrialsforthecornealregeneration.
Figure 6. Assembly of CMPs into scaffolds.
ap
pli
ed
ph
ys
ics
Molecular surface physics and nano sciencestaFFProfessor: KajsaUvdalJunior Researcher: XuanjunZang,CarolineSkoglundPostdoc:Zhangjun.HuPhD students:CeciliaVahlberg,MariaAhrén,LinnéaSelegård,LinnéaAxelsson,NataliaAbrikossova,EmanuelLarssonDiploma students: EmanuelLarssonTechnical staff:BoThunérAdministrative staff:AnnaMariaUhlin,ThereseLindkvist
generalThedivisionofMolecularSurfacePhysicsandNanoScienceisadivisionatAppliedPhysicsIFM,activeinthefieldofNano-materialandMolecularthinfilmphysicsandspectroscopy.Ourmainfocusisonsurfacemodificationforsensing/biorecog-nitionandnanoprobesforbiomedicalimaging.Biospecificbindingphenomenaatsolidsurfacesareinvestigated.Designandcharacterizationofnewandimprovednanoprobesforimagingareperformed.EquipmentusedareX-rayPhotoelec-tronSpectroscopy(XPS),PhotoemissionelectronMicroscopy(PEEM)NearEdgeX-rayAbsorptionFineStructure(NEX-AFS)Spectroscopy,InfraredAbsorptionSpectroscopy(IRAS),DynamicLightScattering(DLS),TransmissionElectronMicroscopy(TEM),computedtomography(CT)andMagneticResonanceImaging(MRI).Supersmallparticlesi.e.particleswithverysmallvolume,withuniquephysicalandchemicalproperties,haveahighpotentialinbiomedicalimagingandfuturebiosensingapplications.Wearedesigningbiocompat-iblenanoparticlesbasedonrareearthmetaloxides.Theseareverypromisingaspositivecontrastagent(Patents)inMRIandCT.PowerfulequipmentavailableatIFM,inhouseexperienceoflifesciencetechnologyandmolecularphysicsaswellasclosecollaborationwithCMIV(CenterforMedicalImageSci-enceandVisualization)facilitateprogressinthefieldofnovelnanomaterialdesignforbiomedicalimaging.ResearchbasedontheuseofsynchrotronradiationisofmainimportanceforourresearchgroupandisconductedatMAXIISwedishnationallaboratoryinLundandatElettraTriesteItalyMAXIIisathirdgenerationelectronstorageringforsynchrotronradiation.ThetechniquesusedarehighresolutionX-rayPhotoelectronSpectroscopy(XPS)andNearEdgeX-rayAbsorptionFineStructure(NEXAFS)spectroscopy)Thisyearwehaveexpandedouractivitytocomputedtomography(CT)atthesynchrotronfacilityatElettraTriesteinItaly.
teacHIng AyearlycourseinSurfaceScience(TFTB35)whichisanUn-dergraduateprofilecourses,4thyearforstudentsonthepro-grammesChemicalBiologyandEngineeringBiology,iscon-ductedinourresearchlaboratories.Thestudentsobtainhandsonexperienceinusingpowerfultechniquesandequipmentin
IFM actIvIty report 2012 35
ap
pli
ed
ph
ysi
cs
surfacescience.Theprojectsandmolecularsystemschosenarecloselyrelatedtoissuesinbiomolecularsurfacemodificationresearch.AnewcourseMaterialforbiomedicalengineering–fromnanotomacrolevel(TFYA63)wasdevelopedandgivenforstudentsenrolledintheBiomedicalEngineeringprogram.Thecoursedealswithbiomaterialsandtheirinteractionwithhumancellsandtissuesandiscomposedoflecturesandsemi-narsaswellasextensivelaboratoryexercises.
tHe pHd prograMMe ThePhDstudentswithinthedivisionofMolecularSurfacePhysicsandNanoScienceareenrolledinthegraduateschoolForumScientium.
HIglIgHtsNanoparticles for biomedical imagingInthisprojectwearedesigningandcharacterizingrareearthnanoparticlestooptimizethecontrastinmagneticresonanceimaging(MRI).Thisprojectincludesmaterialdesignandsynthesis,characteri-zation,surfacemodification,biofunctionalizationandsignaloptimizationfollowedbytaggingfortargetingpurposes. ThesynthesisofthematerialisdoneinclosecollaborationwithInorganicChemistryandbioorganicchemistry,IFM.TheMRsignaloptimizationisdoneincooperationwiththeCenterforMedicalImageScienceandVisualization(CMIV)atthemedicalfacultyandUniversityHospital.WehaveshownthattherelaxationpropertiesofthiscontrastagenthaveanenhancingcapabilitywithrespectofMRIsignal,comparedtothecommerciallyavailableionbasedGd-DTPAcontrastagent.Withthisnewcontrastagenttheaimistoobtainhigher resolu-tion, tissue specific images and cell- and molecular imaging.Knowledge obtained with in the project will contribute to the understanding of drug delivery targeting. Our goal is to improve the contrast to enable high resolution imaging for e.g. early diagnosis of neurodegenerative diseases and cancer. This is a true interdisciplinary project, combining Physics, Chemis-try, Biology and Medicine.
Figure 1. A). Transmission electron microscope images of one Gd2O3 based nanoparticle, B) Schematic illustration of one surface modified nanoparticle C) Image of X. laevis fibroblasts exposed to Nanoparticles D). MR image of the human brain.
Multifunctional Nanoprobes for Tumor Diagnosis Onefunda-mentalpartofthebiomedicalimagingresearchisdevotedtothedesignandsynthesisofnewrecognitionnanoprobesandtotheircapabilityforsignalenhancement.Anewinterdisci-plinaryprojectinvolvingAppliedPhysics,Organicchemistry,Pharmacology,CMIVandClinicalandExperimentalMedi-cinetodevelopnanoprobesforbiomedialimagingandtumortargeting.Ourvisionistodesigncalcium-receptortargetednanoprobeswithluminescenceandmagneticproperties,withthecapabilitytospecificallyimage.
Figure 2 A). Transmission electron microscope images of one Gd2O3 based nanoparticle B) Schematic illustration of surface modification including specific tag both for plane surface and nanoparticle systems
Supramolecular approach to nanoscale metal-containing gels, fibers, belts, and rods. Theligand-structureeffectandmecha-nismof1Dgrowthofnanofibershavebeenstudied.Cu-L1actsas“super-gelators”representingoneoftherareexamplesofmetallogelatorswithverygoodselectivitytoCu(II)overothermetalions.Thesedynamicgelsandnanofibersexhibitsolventmediatedshapetransformationbystimulationofultrasound.Theshapecontrolandthestudyofthestructureeffectatthemolecularlevelinthisworkwillcertainlyexpandthesynthesisof1Dmetal-containingnanostructureinthedevelopmentofnewfunctionalmaterials.
36 IFM actIvIty report 2012
ap
pli
ed
ph
ys
ics
Figure 3. Left: molecular structure of ligand H2L1; right: TEM and SEM images of L-Cu nanofibers and photoimage of the ligand after addition of different metal ions.
Nanoparticles and human living cellsStudiesinvestigatingtheinteractionbetweennanoparticlesandhumanlivingcellsandtissuesareofgreatimportanceinthefurtherdevelopmentfore.g.nanoparticlesforbiomedicalimaging.WehaveperformedstudiestoclarifytheeffectsofGd2O3nanoparticlesonneu-trophilgranulocytesandweshowthatfunctionalizationoftheparticlesurfaceisessentialinordertomaintainahealthycellresponseuponneutrophilexposuretonanoparticles.
Figure 4. Left; fluorescent Gd/Zn nanoparticles phagocytosed by neutrophil granulocytes. Right; Schematic illustration of experimental setup evaluating the effect of nanoparticle exposure on the production of reactive oxygen species.researcH collaboratIons M.EngströmandA.PerssonCenterforMedicalImageScienceandVisualization(CMIV)S.Svensson,PharmacologyHU.MGriffith,Nanomedicine,HealthUniversityLinköping,ProfP.Norman,ComputationalPhysics,LinköpingUniversityProf,R.Yakimova,Prof.A.LloydSpetz,AppliedPhysicsLiuÅboFinland,TBengtssonÖrebro,LiUCancernetwork,IGENcentrewhichisstrategyareaofregenerativemedicineUniversityMLindgrenNTUTrondheimNorway,MaxLabSwedishNationalLaboratoryinLund,JTrombaElettraTriesteItaly.CDullinGermanyS.S.VenkatramanNTUSingaporeIndustrypartnersVironova,ABSPAGOImagingABLund.
tHe centre In nano scIence and tecHnology(CeNano)isanorganizationwithintheTechnicalFacultyofLinköpingUniversity.ThemissionofCeNanoistostrengthenandsup-portthecompetencewithinnanoscienceandnanotechnologyofthefaculty.Thisismadebygatheringresearcherswithnanoactivitiesinthecentreandbyactingforincreasedcollabora-tionsandcommonprojectsinthenanorealm.CeNanoalsoactsfordevelopmentandcoordinationofthegraduateandundergraduateeducationinthisscientificarea.K.UvdalisthedirectorofCeNano.
applied sensor science
staFFProfessor: AnitaLloydSpetzScientists: DrMikeAndersson,DrRobertBjorklund,DrJensEriksson,DrDonatellaPuglisiAdministrative staff: ThereseDannetunGraduate students:ZhafiraDarmastuti,ChristianBur,HosseinFashandiResearch engineers: PeterMöller
researcH actIvItyDivisionofAppliedSensorScienceparticipatesinseveralre-searchorganizationswithinIFM:TheVinnExcellenceCenterFunMat(LloydSpetzactingDeputyDirector),AdvancedFunc-tionalMaterials,AFM,andinprojectswithinAppliedPhysics,MaterialScienceandChemistryDivision.TheCOSTNetwork,EuNetAirTD1105,withpartnersfrom25countrieswaslaunchedinMay2012.ThenetworkactsinthefieldofNewSensingTechnologiesforAir-PollutionControlandEnvironmentalSustainability.LloydSpetzwasappointedDeputyChairofthenetwork. LloydSpetzisactingFiDiPro,FinnishDistinguishedProfes-soratOuluUniversityat50%,2011-2014.Theresearchprojectconcernsdevelopmentofaportablenanoparticledetectorfordetectionofnumber,size,shapeandcontentofparticles.
new generatIon sIc-Fet gas sensorsAnewgenerationofSiC-FETsdevelopedbythespin-offcom-panySenSiCABincollaborationwithAppliedSensorScienceandFunMat,showslargelyimprovedsensorcharacteristicsintermsofselectivity,sensitivityandlong-termstability.Itisalsopossibletofine-tunetheoperationparameterswhenusingthesensorsforalarmpurposessimplybyadjustinganoffsetvoltage,asdemonstratedforammoniainthetoprightfigure.ThenewFETsensorgenerationalsoallowsforbettercontrolofsensoroperationparameterssuchasoperationtemperatureandautomaticzeropointcalibration.
Upper panel: flue gas emissions of CO (red) and ammonia slip (blue). Lower panel: The corresponding sensor signal (gate electrode, iridium) set to an alarm level of 15-20 ppm ammonia.
IFM actIvIty report 2012 37
ap
pli
ed
ph
ysi
cs
grapHene sensors Mono-andbilayergraphene,epitaxiallygrownonSiCinthegroupofProfRositzaYakimova,MaterialScienceDivwaschar-acterizedforgassensingandshowsultra-lowdetectionlimit,lessthan10ppbofNO2.Itwasshownthatuponexposuretoelectronacceptors(oxygen,watervapour,NO2)ordonators(NH3),therelativeFermilevelinsinglelayergraphenesuffersagreaterchangethanthatinbilayergraphene,(R.Pearce,J.Eriksson,T.Iakimov,L.Hultman,A.LloydSpetzandR.Yaki-mova,ACSnano,accepted).ThegraphenesensorresearchissupportedwithinFunMatandAFM-StrategicFacultyGrantinAdvancedFunctionalMaterials.Apatentwasfiledregardingasmartsensordevicebasedongraphene/SiC.AlsoMAXbasedmono-orfewlayermaterialslikeMXene(TiC)areinvestigatedaccordingtogassensingproperties.
Response to <1.5 ppm NO2 (black, left Y-axis) and calculated change in carrier concentration (blue, right Y-axis) due to change in Fermi level for single- and bilayer graphene
sMart sensIngIncollaborationwithProf.AndreasSchützeatSaarlandUni-versityinSaarbrücken,Germany,smartsensoroperationofSiC-FETsandadvanceddataevaluationaredeveloped.
Operationmodeslikecyclingoftheoperationtemperatureorappliedbiasaredesignedandtogetherwithsmartdataevalu-ationtheinformationfromSiCsensorsislargelyimproved.Interestingresultswereobtainedlikesimultaneousquantifica-tionofbothNOandNO2ina(varying)mixtureofsyntheticexhaust.ChristianBurhasapositionasPhDstudentinthisprojectatbothSaarlandandLinköpingUniversitieswithintheresearchschoolDocMASE.
FUnMatTheVINNOVAVINNExcellencecenterFunMat,isalsopresentedelsewhere.Werunprojectswithindustrialpartners(AlstomSwedenAB,SenSiCAB,VolvoTechnology,FordMotorCompany)focusedonMAXmaterials(conductingceramics)forohmiccontactstoSiC,newsensinglayersforSO2,H2S,NO/NO2andO2andasootsensorfordieselexhausts.
MetHanol sensorInajointprojectwithChemistryDivision,Profs.Per-OlovKällandLarsOjamäe,thesynthesisofmethanol,withpotentialasabiofuel,fromCO2andH2isstudied.Methanolistoxicandthereforewedevelopasensorasanalarmforthisgasandforprocesscontrol.
sIc based aMMonIa sensors For control oF sncrThisprojectwasinitiallysupportedbyVärmeforskandinvolvestheindustrialpartners,TekniskaVerken,SenSiCAB,VattenfallandAlstomPowerSwedenAB.ItconcernsdevelopmentofaSiCbasedammoniasensorsystemtocontrolSNCR(selectivenoncatalyticreduction),i.e.injectionofammonia(orurea)inhotfluegasesinordertoconvertnitrogenoxidegasestonitrogenandwater.Itcontinuedpartlyonfacultysupportdur-ing2012.Nowanammoniasensor,alsointendedforstationaryengines,iscommerciallyavailablethroughSenSiCAB.
38 IFM actIvIty report 2012
surface physics and chemistrystaffProfessors: MatsFahlman(HeadofDivision),Koung-AnChao(Emeritus),WilliamR.Salaneck(Emeritus)Associate professors: NathanielRobinsonResearch engineers:SlawomirBraun,XianjieLiuPostdocs:ShengweiShi,ZhengyiSunPhD students: QinyeBao,KatarinaBengtsson,PerErlandsson,SaraNilsson,ParisaSehatiAdministrative staff: KerstinVestin
sUMMaryThedivisionconsistsoftworesearchgroups:OrganicPhysics(Fahlman,Bao,Braun,Liu,Sehati,Shi,Sun)andTransportandSeparations(Robinson,Bengtsson,Erlandsson,Nilsson).TheOrganicPhysicsresearchconsistsoffundamentalstudyandmodeldevelopmentofweakly-interactingorganic-organicandorganic-metalinterfaces;interfaceengineeringinorganicelec-tronicsi.e.developmentoftechniquesforimprovingchargein-jection,excitondissociationandstabilityofinterfacesinorganicelectronicdevices;transparentconductingelectrodes(graphene,inorganicoxides)andtheirinteractionwithorganicelectronicmaterials;intrinsicallyconductingpolymerssuchasPEDOTandPAni:theeffectofsynthesisandchoiceof(poly)aniononconductivity,bio-compatabilityandgeneralsurfaceproperties. TheOrganicPhysicsgroupalsodoesresearchfocusedonthestudyanddesignofhybridorganicspintronicinterfaces(spinter-faces)withtheaimtounderstandandimprovedevicessuchashybridspin-valves;andthedevelopmentandstudyofthinfilmorganic-basedsemi-conductingmagnetssuchasV(TCNE)x,x~2,withtheaimtounderstandandtunematerialspropertiestoen-ableefficientorganicspintronicdevicedesignandfabrication. TheTransportandSeparationsgroupfocusesonionicandelectronictransportinfluidsandsolid-statematerials.Oneparticulargoaloftheresearchistocreateandunderstandnewdevicesinareassuchasmicro-andnano-fluidicsandsolid-statelighting.Thegroupdevelopspumpsformicrofluidiclabs-on-chips.Inadditiontothiswork,thegroupstudiestheinterfacebetweenlargemoleculesandconductingsurfacesforapplicationsinseparationprocesses.Inadditiontotheworkonmicrofluidics,researchanddevelopmentoflight-emittingelectrochemicalcellsarecarriedoutincollaborationwithUmeåUniversity. Collaborationswithspecificfundingduring2012includedtheEU-FP7projectonModellingofelectronicprocessesatinterfacesinorganic-basedelectronicdevices(MINOTOR,Fahl-manPIofLiU),theEU-FP7projectAll-carbonplatformsforhighlyefficientmolecularwire-coupleddye-sensitizedsolarcells(MOLESOL,FahlmanPIofLiU),theEU-FP7projectNextGen-erationHybridInterfacesforSpintronicApplications(HINTS,FahlmanPIofLiU)andtheEU-FP7projectSUstainableNovelFLexibleOrganicWattsEfficientlyReliable(SUNFLOWER,Fahl-manPIofLiU).
ThedivisionreceivedadditionalfundingfromthreecontractsissuedbytheSwedishResearchCouncil(VR)andacontractfromtheSwedishEnergyAgency. Thedivision’sinvolvementintheundergraduateteachingactivitiesoftheuniversityduring2011consistedofthecourseFysikB(Erlandsson).HIgHlIgHtsGeneralRepairandrenovationwascarriedoutontheScientaandMO-SESphotoelectronspectrometersystems.
Emeritus professorsProf.SalaneckattendedtheMarchmeeting(solidstatephysics)ofTheAmericanPhysicalSociety,Boston,MA,USA;the“Fest-shrift”forProf.-Dr.KlausMüllen,Shanghai,China;the50thAnniversaryofthefoundationoftheLaboratoryforResearchonStructureofMatter(LRSM)attheUniversityofPennsylvania,Philadelphia,PA,USA;theICSM-2012(InternationalConfer-enceonSyntheticMetals),inAtlanta,GA,USA,wherehewasChairmanfor“SurfacesandInterfaces”. Prof.SalaneckisamemberoftheBoardofDirectorsforanSMEandaVinnovaproject.
Organic Physics groupBycombiningXPS,UPSandNEXAFS,westudiedtheinterfaceinteractionandenergylevelalignmentbetweendyemolecules(EPFL,IMECinMOLESOL)andTiO2,sheddinglightontheimportanceofsurfacedefectsstatesintheTiO2nanocrystals. BycombiningXPS,UPSandNEXAFS,wecarriedoutengi-neeringandcharacterizationofgrapheneandNCDsurfaces,withanemphasisonachievingworkfunctiontailoring.(MPIP,IMECinMOLESOL). BycombiningXPS,UPSandNEXAFS,westudiedthechemi-calinteractions,energylevelalignmentanddegradationeffectsofmaterialsandinterfacesconstitutingtandemsolarcells(Gen-esInk,BASF,Chalmers,AGFA-GaevertinSUNFLOWER). ContinueddevelopmentoftheIntegerChargeTransferModelfocusedonmolecularordereffectsandenergygradientsovermultilayersysytemswascarriedoutincollaborationwithGeertBrocksandMicheldeJongoftheUniversityofTwente(MINO-TOR). Ultravioletphotoelectronspectroscopy,opticalabsorption,photoluminescence,andchargecarriermobilityversustem-peraturedatawasusedtodeterminethecontributionsfromthepolaronbindingenergyandenergeticdisorderonthehole-trans-portingpropertiesofpoly(3-hexylthiophene). BycombiningXPSandUPSwithdeviceperformance,mecha-nismsforengineeringcharge-injectinginterfaceswereclarified BycombiningXPS,UPS,NEXAFSandXMCD,spin-injectinghybridorganicinterfacesweredesignedandstudied(HINTSandFudancollaboration). Thegroupgavetwoinvitedtalksandoneinvitedtutorial:TPE12,Rudolstadt,Germany,May(Invitedtalk);Electronicpro-cessesatinterfacestoorganicsemiconductors:frommodelingtodevices,Mons,Belgium,June;OREA-ICARUSsummerschool,Crete,Greece,July.
Transport and separations groupTheTransportandSeparationsGrouphasinitiatedseveralpro-jectsintheareaofmicrofluidicdevices. OurLISTprojectincollaborationwiththeImagingandUbiq-uitousChemicalSensingLabatIFMandtheCellBiologygroupatIKEhasresultedinmicrofluidicdevicesforuseinmeasuringfucoseinurine. Wehavebegunmakingandtestingmicrobioreactorswith
ap
pli
ed
ph
ys
ics
IFM actIvIty report 2012 39
ourpartnersintheBiotechnologygroupatIFM.Thesedevicesareintendedtohelpreducetheneedforanimaltestingduringchemicaltoxicityandpharmaceuticalevaluations. WehavealsoinitiatedaprojectwiththeClinicalChemistryGroupatIKEtodesignmicrofluidicsystemsforstudyingandanalyzingtheactivationofplateletsinbloodbyshearstress.-Oneofthemostexcitingareasofdevelopmentistheuseof3Dprinting(fabbing)toproducemicrofluidicdevices.Weusea3Dprintercapableofextrudingsoftmaterialslikepolymers,allow-ingustotakeadvantageofourpreviously-developedtechnolo-giessuchasthepolymerelectroosmoticpumpandmakingourresearchratheruniqueintheworld.
cooperatIng partners and vIsItIng scIentIstsThedifferentinternationaluniversities,institutesandcompa-nieswithwhichfundingweresharedinprojectsduring2012arelistedbelow:
EU-FP7 MINOTOR: UniversityofMons,UniversityofTwente,InteruniversitairMicro-Electronica,UniversityBordeaux,BolognaUniversity,UniversitadAutonomadeMadrid,BASF,Forschung-szentrumKarlsruheandGeorgiaInstituteofTechnology.
EU-FP7 MOLESOL:IMEC(Belgium),J.HeyrovskyInstituteofPhysicalChemistryofTheAcademyofSciencesoftheCzechRe-public,EcolePolytechniqueFederaledeLausanne,Max-PlanckInstituteforPolymerResearch,SolarPrintLtd,GreatcellSolar.
EU-FP7 HINTS: ISMN-CNR,MartinLutherUniversityHalle-Wit-tenberg,NanoGUNE,TrinityCollegeDublin,JožefStefanInsti-tute,QueenMaryUniversityofLondon,UniversityofKaiser-slautern,UniversitatdeValència,Dr.EberlMBE-KomponentenGmbH,M-Solv,THALESGroup,CNRSPALAISEAU.
EU-FP7 SUNFLOWER:CSEM,BASFAG,DuPontTeijinFilms,AMCORFlexibles,AGFA-GaevertNV,FluximAG,KonarkaTechnologies,SAESGetters,CNR–ISMN,FachhochschuleNor-dwestSchweiz,Chalmers,FhGIVV&ISC,UniversitatJaumeIdeCastellon,GenesInk,CNRS,UniversityofGlasgow.
WealsoreceivedavisitfromMartinKronsteinfromtheViennaUniversityofTechnology.
Therearemanyotherpartnersinco-publishingactivitiesoutsideoftheco-financedprojectsaswell.
InteractIon wItH socIetyCommercializationeffortsareunderwayforboththeLECandmicrofluidicresearchviaLunavationAB. WeassisttheindustrialpartnersintheircommercializationeffortsinthevariousEUFP7projects.
ap
pli
ed
ph
ysi
cs
40 IFM actIvIty report 2012
scIentIFIc brancH oF
BiologystaFFProfessors: MatsAmundin(adjunctprofessor),PerJensen,JanLandin(emeritus),MatthiasLaska,PerMilbergAssociate professors/Senior lecturers:AgnetaJohansson(Directorofstudies),RickyAnsell(adjunct),JordiAltimiras,KristinaBlomqvist,JohanEdqvist,Karl-OlofBergman,JennyHagenblad,AndersHargeby,RonnyLock,KarinTonderski,JennieWestander(adjunct),ThomasÖstholmAssistant professors: HeidiPaltto,HanneLøvlie,LinaRoth,DominicWright,LarsWesterberg,MattiLeinoJunior lecturers: KjellCarlsson,EvaMattson,ÖrjanLönnevik,ÅsaRyboLandeliusOther teaching staff (part time): JohanBergstedtPost doc: RieHenriksen,VivianGoerlich,IsaLindgren,NiklasJansson,DanielNätt(50%IKE),HugoOliveira,Ann-CharlotteSvensson-JolmPhD-students: BeatrixAgnvall,JohanBeltéky,HristinaBodin,MariaEricsson,AmirFallahshahroudi,NilsForsberg(NTU),PernillaFoyer(FHS),MagnusElfwing,KarinJohannesson,MartinJohnsson,Anna-CarinKarlsson,HåkanLättman,PiaLötvedt,HelenaOlsson,MonikaMalmbeckerEdstam,JosefinStarkhammar(LU),DanielWennergren,JosefinaZidar,AndersWirén,HannaÖstermanAdministrative/Technical staff: IngevaldAbrahamsson(Engineer),LejlaBektic(AnimalTechnician),ToveBjerg(Technician),MariaLundström(LabTechnician),JessicaLövdahl(Administrator),MiaPersson(LabTechnician),AndreyHoglund(LabTechnician),Eva-MariaStigsdotter(Administrator),AnnaSundin(Administrator)
Biologycoversallaspectsoflifescience,fromsubcellularmolecularprocesses,viaorganismstowholeecosystems.Basicscientificchallengesintheareaconcernthewayinwhichgeneticinstructionsinfluencethedevelopmentoforganisms,whichinteractandconstituteacomplexbiologicalsystem.Thisisknowledge,whichisstronglyrequestedfromsociety.Itinfluencesawiderangeofsocietalissuesfromtheuseofgenetechnologyforalteringandaffectingthefunctionofvariousorganisms,toquestionsofanimalwelfareinmodernfarmingandthemanagementofspeciesandechosystemsforbiologicalconservationpurposes. IFMBiologyhasabout60personsemployedintotal,ofwhichabout20arePhD-students.Toorganizeandleadtheactivities,thebranchhasasteeringcommittee,whichinclu-destheheadofdivision,twoassistantheadsofdivision,andthedirectorofstudies.Thisgroupmeetseveryweekandisresponsibleformattersconcerningbudget,teaching,research,PhD-educationandorganization.
WithinIFMBiology,theresearchisorganisedinresearchgroups,whichareadhocassociationsofpeopleworkingonacommonscientifictheme.Thegroupsaredynamic,andcanchangetheircompositionasdeemedsuitablebytheinvolvedpeople.Inthefollowingpages,theresearchgroupsactiveduringthisyearpresenttheiractivities. ThePhD-educationiscarriedoutwithinfourdifferentsubjects:Ecology,Zoology,EthologyandMolecularGenetics.WithinEcology,emphasisisoncommunityandpopulationecology,includingconservationbiology,vegetationandwetlandecology.Here,methodologyandtemporaltrendshavebeenstu-diedinareassuchasphenotypicplasticityandseeddormancy.InMoleculargenetics,researchtrainingisfocusingonplantmolecularbiology.InZoology,researchismainlyfocusedondevelopmentalaspectsofcardiovascularcontrolsystemsandcomparativeolfactionresearch,andinEthology,focusisondomesticationeffectsonbehaviourinchickens.Thestaffisalsoheavilyinvolvedinundergraduateteachinginallsubjectscoveringthebiologicaleducationprograms. IFMBiologyhashadanexcellentsuccessrateinexternalfundingoverthelastcoupleofyears,andimportantgrantswerealsoobtained2012.Forexample,researchersfromthebranchwereawardedprojectgrantsfrombothVRandFormas.ProfessorPerJensen,professorPerMilberg,andSeniorlectu-rerJordiAltimirasholdcontractsupportsfromtheUniversity,andProfessorPerJensenwasawardedanERCAdvancedResearcherGrant. Researchfacilitiesincludetheresearchchickenhouse(“Wood-Gush”)andthehatchery(“Kruijt”),alongwithstate-of-the-artmolecularlabfacilities. StafffromIFMBiologywasinstrumentalinplanningandorganizingapopularscienceday,withparallelsessionscontaininglecturesinbiology,chemistry,physicsandmathe-matics.Thelecturesattractedintotalabout1000attendants,mostlyschoolteachersandhighschoolstudents. IFMBiologyhasawide-rangingcollaborationwithgroupsandlabsindifferentplacesofSwedenandabroad.Forex-ample,cooperationinbothteachingandresearchismain-tainedwithgroupsinBolivia,TheNetherlandsandGreatBritain.Furthermore,thecooperationwithKolmårdenZoohascontinuedandproducesbothresearchresultsandteachingcol-laboration.
42 iFM Activity RepoRt 2010
Bio
Lo
Gy
ScieNtiFic BRANcH oF
BiologyGeneral information
Chairman:ProfessorPerJensen
Biologycoversallaspectsoflifescience,fromsubcellularmo-lecularprocesses,viaorganismstowholeecosystems.Basicscientificchallengesintheareaconcernthewayinwhichgeneticinstructionsinfluencethedevelopmentoforganismswhichinteractandconstituteacomplexbiologicalsystem.Thisisknowledgewhichisstronglyrequestedfromsociety.Itinfluencesawiderangeofsocietalissuesfromtheuseofgenetechnologyforalteringandaffectingthefunctionofvariousorganisms,toquestionsofanimalwelfareinmodernfarmingandthemanagementofspeciesandechosystemsforbiologi-calconservationpurposes.
ThescientificbranchBiologyhasabout50personsemployedintotal,ofwhichabout20arePhD-students.Toorganizeandleadtheactivities,thebranchhasasteeringcommittee,whichincludesallprofessorsandothermainPhD-supervisors.Thisgroupmeetseverymonthandisresponsibleformattersconcerningbudget,research,PhD-educationandorganization.
Thescientificbranchofbiologyisorganisedinthreedifferentdivisions,headedbythefollowingpersons:
• Ecology(professorPerMilbergandassociateprofessorKarinTonderski)
• Molecularbiology(associateprofessorJohanEdqvist)• Zoology(associateprofessorJordiAltimiras).
Withinecology,emphasisisoncommunityandpopulationecology,includingconservationbiology.Wetlandecologyisalsostudiedinanumberofinternationalcooperativeprojects.Anotherimportantresearchareaisvegetationecology.Here,methodologyandtemporaltrendshavebeenstudiedinareassuchasphenotypicplasticityandseeddormancy.InMole-culargenetics,researchiscarriedoutintwogroups,headedbyassociateprofessorJohanEdqvistandprofessorCorneliaSpetea-Wiklund,bothfocusingonplantmolecularbiology.Inzoology,researchismainlyfocusedondevelopmentalaspectsofcardiovascularcontrolsystems,ondomesticationeffectsonbehaviourinchickens,andoncomparativeolfactionresearch.Thestaffisalsoheavilyinvolvedinundergraduateteachinginallsubjectscoveringthebiologicaleducationprograms.
Thescientificbranchhashadanexcellentsuccessrateinexternalfundingoverthelastcoupleofyears,andimportantgrantswerealsoobtained2010.Forexample,researchersfromthebranchwereawardeda5-yearexcellencegrantforstrongresearchenvironmentsfromFormas.ProfessorPerJensenandprofCorneliaSpetea-Wiklundholdcontractfundingfrom
LiU,eachcomprisingaguaranteed2.2millionSEKperyearinfacultysupport.
Researchfacilitiesincludetheresearchchickenhouse(“Wood-Gush”)andthehatchery(“Kruijt”),alongwithstate-of-the-artmolecularlabfacilities.
ThescientificbranchBiologywasinstrumentalinplanningandorganizingapopularscienceday,withparallelsessionscontaininglecturesinbiology,chemistry,physicsandmathe-matics.Thethemewas“Expandreality”,asatributetothesloganofLiU.Thelecturesattractedintotalabout1000attendants,mostlyschoolteachersandhighschoolstudents.
Thebiologybranchhasawide-rangingcollaborationwithgroupsandlabsindifferentplacesofSwedenandabroad.Forexample,cooperationinbothteachingandresearchismaintainedwithgroupsinBolivia,TheNetherlandsandGreatBritain.Furthermore,thecooperationwithKolmårdenZoohascontinuedandproducesbothresearchresultsandteach-ingcollaboration.
Chickens are important model animals in the Division of Zoology. Their behaviour, genomics and physiology are studied in a number of research projects.
Chickens are important model animals in the Division of Zoology. Their behaviour, genomics and physiology are studied in a number of research projects.
BiO
lOg
y
IFM actIvIty report 2012 41
avIan behavioral genomics and physiologyTheAVIANGroupincludesresearchonbehaviour(PerJensen)andpersonality(HanneLøvlie),physiology(JordiAltimiras)andgenetics(DominicWright). Althoughnotrestrictedtoit,mostofthegroup’sresearchfocusesontheancestralRedJunglefowlandmodernchickenbreedsselectedforfarmingpurposessuchaseggproductivityormeatyieldwiththegoalsofunderstandingthegeneticbasisofanimaldomesticationanditsfunctionalmechanisms. AspartoftheCentreofExcellenceinAnimalWelfareScienceourresearchisalsodedicatedtotheimprovementofanimalwelfare.In2012,forexample,wehaveshownthatearlystressproduceslife-longandtransgenerationalmodificationsinbehaviour,stressreactionsandgeneexpressioninchickens(Goerlichetal,2012inHormonesandBehavior).
A Red Junglefowl hatching in the foreground and a White Leghorn hatching in the background
TheethologylabhasrecentlypublishedpartoftheresultsfromthefearselectionstudyshowingthatRedJunglefowlselec-tedforlowfearofhumansdisplayscorrelatedresponsesinanumberofotherbehaviourtraits.Theroleoftwogenes,TSHRandADRA2Cinchickendomesticationisalsounderstudy,sincetheyhaverecentlybeenfoundtocarryaclearsignatureofselection.AndersWirénsuccessfullydefendedhisPhDthesisentitled“Correlatedselectionresponsesinanimaldomestica-tion:thebehaviouraleffectsofagrowthQTLinchickens”. Thegeneticslabhasmadeimportantprogressintheirat-tempttodissectcomplexbehaviouralandphysiologicaltraitsusingQuantitativeTraitLocusexperimentalapproaches.TheirpaperinPLoSGenetics(Johnssonetal.2012,Asexualorna-mentinchickensisaffectedbypleiotropicallelesatHAO1andBMP2,selectedduringdomestication)receivedalotofmediaattentionanddemonstratedhowtwogenesthatwererespon-sibleforincreasingcombmassalsoincreasedeggproductionandboneallocation.Thisrevealedatageneticlevelhowasexualornament(thecomb)canhavepleiotropiceffectsonothertraits.
ThepersonalitylabhasstartedworkingwiththeincorporationofthefirstLiUPhDstudentJosefinaZidar.ZidarandLøvliepublishedapaperinAnimalBehaviourshowingthebehaviou-ralresponsestoolfactorycuesbydomesticfowl.
Cardiomyocytes isolated from embryonic chicken hearts. Cell nuclei shown in blue (DAPI), actin myofilaments shown in green (Bodipy Phallacidin) and α-actining shown in red Thephysiologylabcontinuestheworkonthemechanismsoffetalprogrammingofcardiacgrowthandfunction.Incollabo-rationwithDaneCrossleyattheUniversityofNorthTexasthegrouphasshowndistinctdifferencesinthemechanismsofcardiovascularregulationindifferentchickensbreeds(CrossleyandAltimiras,2012inPoultryScience).Thegroupisalsocolla-boratingwithAlvaroGaritanofromUniversidadMayordeSanAndrésinLaPaz,BoliviainthestudyofcardiacfunctionintheOrnateTinamou,aprimitivebirdthatthrivesintheAndeanAltiplanoat4000metersabovesealevel.Tosupportthein-creasingneedforstudiesincellularmodelsanewcellculturefacilitywasinstalledandstudiesonthegrowthofcardiaccellsinresponsetodifferenthormonesandenvironmentalfactorsarebeingcarriedout. Furtherinformation,newsandpublicationsfromtheAVIANgroupcanbefoundathttp://www.ifm.liu.se/biology/zoology/avian/
BiO
lOg
y
42 IFM actIvIty report 2012
conservation ecology groupstaFFProfessors:PerMilberg
Researchduring2012focusedoninsect,trees,species-richgrasslandsanddeciduousforests.
Boloria selene, a butterfly of species-rich meadows, visiting the plant Knau-tia arvensis.
Wepublishedastudyonthesaproxylicbeetlefaunaonoldoaks(Quercusspp.)withtheaimtofindaspatialscaleatwhichdensityofoldoaksbestexplainedthepresenceofspeciesinalandscape.Findingsuchaspatialscaleisimportantforconser-vationofbiodiversityinoak-richlandscapes.Severalprojectswithsimilarfocus,butdifferentapproachesforsamplingandanalyses,arecurrentlyrunning. Insomeofthesespatialprojects,weusedanewphero-mone-trappingmethod(wherethemalesareattractedtoasubstanceequivalenttothefemalepheromone).In2012weat-temptedtwoadditionalpheromonesystems:amothassociatedwithlargedeciduoustrees,andagroupofmothsingrassland(burnetmoths),thatarepotentialindicatorspeciesformonito-ringbiodiversity. Anotherpromisinglineofworkinvolvedspeciesdependenton,orpromotedby,forestfire.
Many species of insects and fungi, including many rare ones, depend on forest fires. Preserving such species constitute a major challenge, and is likely to benefit from a landscape perspective
cooperatIon Ourprojectsinvolvecooperationwithanumberofuniversitiesandresearchinstitutes,e.g.UniversityofLund,Sweden;SLU(Uppsala,Alnarp,Umeå),Sweden;MidSwedenUniversity,Sweden;OklahomaStateUniversity,USA;MiddleTennesseeStateUniversity,USA;HaremayaUniversity,Ethiopia;Univer-sityofBallarat,Australia.
external actIvItIesMonitoringofspeciesisanimportantpartofdetectingenvironmentalchanges.PerMilberg,LarsWesterbergandKarl-OlofBergmanwereinvolvedinanationalevaluationofmonitoringprogramsinsemi-naturalgrassland,andPerMil-berginafeasibilitystudyformonitoringofagriculturalweeds(bothcommissionedbytheBoardofAgriculture),andLarsWesterberghasanappointmentasmonitoringanalysisexpert(theEnvironmentalProtectionAgency).Karl-OlofBergmanisinvolvedinanationalmonitoringprogramforbiodiversityinsemi-naturalgrasslands.HeidiPalttohasbeeninvitedtotalktostaffmembersofauthorities,andtogiveacourse. OurstaffpresentedresearchforstudentsandteachersfromsecondaryschoolsinthecountyatthePopularScienceDay,arrangedbyIFM.Wehavealsobeeninvolvedinpresentationsforthepublicarrangedbytheuniversity,andhaveguidedstudyvisitsfromprimaryandsecondaryschools.
HIgHlIgHtsHåkanLättmanpresentedhisPhDthesis“Studiesonspatialandtemporaldistributionsofepiphyticlichens”.HeidiPalttowaspromotedtodocent(associateprofessor). Since2010KolmardenisengagedintheLIFEprojectSAM-BAH(StaticAcousticMonitoringoftheBalticHarbourpor-poise;www.sambah.org),whichaimsat,byusing300passiveacousticdataloggers,monitoringharbourporpoisesintheBal-ticSea.Kolmardenistheinternationalcoordinator.Theprojectisnowinitssecondyearofdatacollection;itwillbecompletedinMay2013.ThefinalreportwillbeissuedinDecember2014. Kolmårdenwasalsoengagedinthe3-yearEU-project,calledEUZooS-XXI,(www.euzoos-xxi.org).ItwasfinishedinSeptem-ber2012.Itfocussedonfourimportantconservationtopics:invasivealienspecies,endangeredspecies,biologicaldiversityandecologicalconnectivity.Representativesfromthegeneralpublicwereinvitedandaskedtoproduceconcretesuggestionshowthesesubjectscouldbepresentedtothezoovisitors.At
BiO
lOg
y
IFM actIvIty report 2012 43
Kolmardenthisresultedinanewanimalexhibit,called“Mada-gascar”,wherethreelemursrepresentedtheisland’sunique,criticallyendangeredfauna.Arichvarietyofinformationwasdevelopedaroundtheexhibit,e.g.vialargetouchscreensanddailyoralpresentationsbyzooeducators. Kolmården’sengagementintheLiUMastersprogram”AppliedEthologyandAnimalBiology”continues,withseveralcoursepartscarriedoutinthezoo,e.g.theentire7hpcourseZooBiology. JosefinStarkhammarattheDivisionofElectricalMeasu-rements,UniversityofLund,supervisedbyMatsAmundin,defendedherdoctoralthesisintheendof2011.Thefinalpaperwaspublishedinthebeginningof2012.Itpresentsatechnicaldescriptionofthemulti-hydrophonesystemthatshedeve-loped.TheprojectwasfundedbytheResearchCouncil,andwascalledELVIS(Echo-LocationVisualizationandInterfaceSystem).
Figure 1. The ELVIS system, with the 47-hydrophone matrix in front of a dolphin. In the acoustic “touch” screen configuration this screen is mounted in front of an underwater window, allowing the dolphins to see active symbols and the computer screen graphics projected on the screen. reFerencesArvidsson,J.,Amundin,M.andLaska,M.(2012):Success-fulacquisitionofanolfactorydiscriminationtestbyAsianelephantsElephasmaximus.PhysiologyandBehavior,105:809–814.Starkhammar,J.Amundin,M.,Nilsson,J.,Jansson,T.,Alm-qvist,M.,andPersson,H.W.(2012):Designandbenchmarktestsofamulti-channelhydrophonearraysystemfordolphinecholocationrecordingsOJA2012_2_121-130.Tasker,M.,Amundin,M.,Andre,M.,Hawkins,A.D.,Lang,W.,Merck,T.,Scholik-Schlomer,A.,Teilmann,J.,Thomsen,F.,Werner,S.,andZakharia,M.(2012):ManagingUnderwaterNoiseinEuropeanWaters:ImplementingtheMarineStrategyFrameworkDirective.In:A.N.PopperandA.Hawkins(eds.),TheEffectsofNoiseonAquaticLife,AdvancesinExperimentalMedicineandBiology.SpringerScienceandBusinessMedia.Tougaard,J.,Kyhn,L.A.Amundin,M.,Wennerberg,D.andBordin,K.(2012):Behavioralreactionsofharborporpoisetopile-drivingnoise.Adv.Exp.Med.Biol.730:277-280
plant evolution and domestication group
staFFAssociate Professor:JohanEdqvist,JennyHagenbladAssistant Professor:MattiLeinoFirst Research Engineer:KristinaBlomqvistPost doc:HugoOliveiraPhD student:MonicaMalmbeckerEdstam,NilsForsbergTechnician:MariaLundström,ToveBjergDirector of studies:AgnetaJohansson
researcH and pHd traInIngThePlantEDgroupfocusesontwomainlinesofresearch.TheLTPteamheadedbyJohanEdqvistfocusesonunderstandinglipidtransportproteinsusingPhyscomitrellapatensandArabidopsisthalianaasmodelsystems.TheHistoricSeedGroup,headedbyJennyHagenbladandMattiLeinoexplorestheevolutioncropplantsinarangeofcropspeciescultivatedinScandinavia. TheresearchintheLTPgroupisfocusedonfunction,structureandevolutionofthenon-specificlipidtransfer
BiO
lOg
y
44 IFM actIvIty report 2012
protein(ns-LTP)inplants.TheHistoricSeedGrouprunsseveralprojectsconcerningthegeneticsandevolutionoflandracecropsandagriculturalhistorywithparticularattentiontocropscultivatedinFennoscandia.Bothgenebankmaterialandseedsamplesfromhistoricalcollectionsareusedforthestudiesandbothneutralmarkersandfunctionalgenesareinvestigatedtoexplorebothpopulationgeneticstructureandspecifictraitssuchasfloweringtimeandnutrientcontentofhistoricalcrops. InadditiontotheresearchthePlantEDgrouphasalsorunabi-weeklyjournalclubwherealsoresearchersandPhDstudentsnotinthePlantEDgrouphavejoinedtodiscusthelatestfindingswithinplantgeneticresearch.HIgHlIgHtsAnumberofnewpeoplehavebeenrecruitedtothegroup:KristinaBlomqvistasFirstResearchEngineer,NilsForsbergasaPhDstudentandHugoOliveiraasapost-doctoralresearcher.TheLTPgrouphasestablishedanefficientsystemforproductionofplantlipidtransferproteins.WehavealsoidentifiednovelArabidopsisphenotypesshowingaroleforLTPsinseeddevelopment. TheHistoricSeedGrouphasincollaborationwithresearchersatINRAClermont-Ferrandpublishedaworld-widescreenofanutrientcontentgeneinwheatinTheoreticalandAppliedGenetics.AnextensivescreenofthegeneticsoflandracegreypeaduringthepastcenturyandahalfhasbeenpublishedinHeredity.TwopapersongeneticdiversityonMediterraneanwheathavebeenpublishedinPLoSOneandGeneticResourcesandCropEvolutionrespectively.ASwedishlanguageoverviewontheoriginofhopsinSwedenhasbeenpublishedinSvenskBotaniskTidskrift,andapopularscienceessayonthehistoryofthestemrustdiseasewaspublishedinFataburen.TheHistoricSeedGroupalsohostedameetingwithtworesearchersfromCambridge,hopefullytheinitiationoffuturecollaborations.
collaboratIonsExternal collaborationsLTPgroup–TiinaSalminen(ÅboAkademiUniversity),PeterMattjus(ÅboAkademiUniversity),MagnusEklund(UniversityofMelbourne)Historicseedgroup–FrançoisBalfourierandCatherineRavel(INRAClermont-Ferrand,France),RobbieWaughandJoanneRussell(JamesHuttonInstitute,Scotland),AnnaPalmé(NordGen,Alnarp),LinnéaAsplund(SLU,Uppsala),Else-MarieStreseandPerLarsson(Nordiskamuseet,Julita),KristiinaAntonius(MTTAgrifoodResearch,Finland),JimWeller(UniversityofTasmania,Australia)andBenteGraae,ChristophePelabon,AtleBonesandTorfinnSparstad(NorwegianUniversityofScienceandTechnology,Trondheim)
external actIvItIesTheHistoricSeedGrouphasparticipatedwithtalksandpostersatfiveinternationalmeetings.TheseniormembersofthegrouphavealsobeenevaluatingaPhDdissertation,aPhDhalf-timereportandanERCadvancedresearchergrantapplication.TheHistoricSeedGrouphasalsobeenrepresentedatworkgroupmeetingsatNordGenandtheSwedishprogrammefordiversityofcultivatedplants(POM)
specIal eventsInMayJennyHagenbladreceivedastipendfromKingCarlXVIGustaf50thAnniversaryFundforScience,TechnologyandtheEnvironmentfromHRHCarlXVIGustaf.InNovemberMattLeinowaspromoted“docent”ingenetics.
the sensory and behavioral physiology groupstaFFProfessors:MatthiasLaska
ResearchintheSensoryandBehavioralPhysiologyGroupfocusesonodorstructure-activityrelationships,thatis,onde-terminingthepropertiesofstimulusmoleculesthatarecriticalfortheinteractionwithanolfactoryreceptorandthusfortheodorqualitytheyevoke.Asecondresearchtopicconcernscor-relationsbetweenchemosensoryperformanceandneurobiolo-gicalandgeneticpropertiessuchasthesizeofolfactorybrainstructuresorthesizeoftheolfactoryreceptorrepertoire.Withbothtopics,acomparativeapproachincludinghumansubjectsandavarietyofanimalmodelsisemployed.
Master’s student Nellie Linander gearing up for her studies on olfactory sensitivity in honeybees, performed at the Centre for Research in Animal Behaviour at the University of Exeter, England
HIgHlIgHts MatthiasLaskaandoneofhisstudentswereabletodemon-stratethatmiceareextraordinarilysensitivetotheodorofaliphaticcarboxylicacids,substancesknowntobepartoftheirbodyodor.Themicedetectedconcentrationsaslowas3ppt(partspertrillion)anddisplayedsignificantcorrelationsbetweenolfactorysensitivityandmolecularstructuralfeaturesoftheodorantssuchaslengthorbranchingofthecarbonchain(GüvenandLaska2012.PLoSONE7:e34301).
BiO
lOg
y
IFM actIvIty report 2012 45
BiO
lOg
y
IncollaborationwiththeCentreforResearchinAnimalBe-haviourattheUniversityofExeter(England),NellieLinandershowedthathoneybeesareabletodetecttheodorofaminoacids,importantconstituentsoffloralnectar,atmillimolarconcentrations(Linander,HempeldeIbarra,andLaska2012.Chem.Senses37:631-638). JosefinArvidssonsucceededintrainingtheAsianelephantsatKolmårdenzootocooperateinafood-rewardedolfactorydiscriminationtest,thusaddingyetanotherspeciestothecomparativestudiesonolfactoryperformanceperformedbythegroup.Shefoundthatelephantsareevenfasterthandogs,mice,andratsinlearningnewolfactorytasks(Arvidsson,Amundin,andLaska2012.Physiol.Behav.105:809-814).IncollaborationwiththeInstitutodeNeuro-EtologiaoftheUniversidadVeracruzana(Mexico),PiaKatrineLøtvedtdemon-stratedthatspidermonkeysarehighlysensitivetothetypical“greenodors”emittedbyyoungleaves.Further,shefoundthatthenumberoffunctionalolfactoryreceptorgenesarepoorpredictorsofolfactorysensitivityinprimates(Løtvedt,Murali,HernandezSalazar,andLaska2012.Pharmacol.Biochem.Behav.101:450-457).
Master’s student Josefin Arvidsson training Asian elephants in an olfactory discrimination test at Kolmården Wildlife Park
cooperatIon.TheSensoryandBehavioralPhysiologyGrouphasalong-standingcollaborationwiththeInstitutodeNeuro-EtologiaoftheUniversidadVeracruzanainXalapa,Mexico.Everyyear,studentsenrolledintheInternationalMaster’sProgram“AppliedEthologyandAnimalBiology”,havethepossibilitytoperformtheexperimentalpartoftheirthesisworkinMexicoandcollectdataonchemosensoryperformanceinspidermon-keys.ThegroupisalsocollaboratingwiththeDepartmentofFoodChemistryattheUniversityofErlangen,Germany,wherejointstudiesonthechemicalcompositionofcomplexnaturalodorsareperformed.ThegroupisalsocollaboratingwiththeDepartmentofNeurobiologyatYaleUniversityinNewHaven,Connecticut,andisinvolvedinajointprojectonthepheno-typicalcharacterizationofAlzheimer’sdiseasemodelmice.Further,thegroupiscollaboratingwiththeCentreforResearchinAnimalBehaviourattheUniversityofExeter,England,inajointprojectoncomparativeolfactoryperformanceinhoney-beesandmammals.Finally,thegroupiscollaboratingintensi-velywithKolmårdenWildlifeParkwherenumerousstudiesareperformed.
46 IFM actIvIty report 2012
ChemistrysteerIng coMMItteeProf.Bengt-Harald“Nalle”Jonsson(chairman),Assoc.prof.StefanSvensson,Prof.UnoCarlsson,Prof.PerHammarström,Prof.PeterKonradsson,Prof.IngemarKvarnström,Prof.LarsOjamäe,Prof.Per-OlovKäll,Prof.MariaSunnerhagen.Prof.ElkeSchwedaThee-mailaddresstotheheadofthebranchis:[email protected]
researcH dIvIsIons oF cHeMIstry• ProteinChemistry• MolecularBiotechnology• OrganicChemistry• PhysicalChemistry• InorganicChemistry• AnalyticalChemistry
sUMMary oF actIvItIes TheresearchbranchofChemistry,coveralltraditionalareasofchemistry.ThemajorresearchprogramsProteinChemistry,MolecularBiotechnologyandOrganicChemistryallhaveastrongfocusonMolecularLifeScienceandChemicalBio-logy.ResearchactivitiesinAnalyticalChemistry,InorganicChemistryandPhysicalChemistryareledbyseniorstaff,ofteninco-operationwithotherresearchersinthedepartmentandwithotherresearchprogramsattheUniversity.18PhDstudentshavebeenenrolledand4PhDThesisand1LicThesisweredefendedatthedepartmentduring2012.Theresearchinthedifferentresearchdivisionsarepresentedinthefollowingsections.
proteIn cHeMIstry Professors: UnoCarlssonandPerHammarströmAssociate professors:Lars-GöranMårtensson,MagdalenaSvens-sonPost-doc:SofieNyström,AndreasÅslund,JeffreyMason,Ra-jeshMishra,CeciliaAndresenTechnician:MariaCarlsson,DanielSjölanderPhDstudents:PatriciaWennerstrand,MariaJonson,RaulCam-posMeloAdministrator:SusanneAnderssonactIvItIesThegeneralobjectiveofourresearchinproteinchemistryistounderstanddifferentimportantaspectsoftheproteinfoldingprocess.Thisalsoincludesmisfoldingandrelateddiseasesaswellasconformationalchangesassociatedtoprotein-proteininteractionsandproteinadsorptiontosolidsurfaces. Amajorgoalofproteinengineeringisthedesignofsta-bilizedproteinvariantsforuseinmanyapplications.Inthisprojectweuseseveralstrategiesbasedonexperiencefromourfoldingstudiestostabilizethestructureofourmodelproteincarbonicanhydrase.Engineeredproteinswithvaryingstabi-lityanddifferentsurfacestructurearealsoemployedtostudytheinteractionwithsolidsurfaces,aphenomenonthatisveryimportantinmanybiotechnologicalapplications.
MolecUlar cHaperones.Foldinginvivoisformanyproteinsassistedbyseveralproteinfactorssuchasmolecularchapero-nes.Althoughproteinscanfoldspontaneouslythechaperonessuppressaggregationduringfoldingandincreasetheyield.Inourresearchweaimtogaininsightsintothemechanismofchaperonefunctionthatisessentialfortheunderstandingofthefoldingmechanismandpreventionofmisfolding.
MIsFoldIng dIseasesrepresentalargecollectionofdiseases.ThisgroupincludesforexamplethepriondiseasesCreutzfeldt-Jakobdiseaseandmadcowdisease;theamyloiddiseasessuchasAlzheimer’sdiseaseandfamilialamyloidoticpolyneuoro-pathy(Skellefteåsjukan).Allthesediseasesareconnectedtoaspecificproteinthatmisfoldsintoalternateconformationsandoftenformsaggregates.Weareworkingwithproteinsinvolvedinallofthementionedfoldingdiseases.Ourobjectivesarealsotoinhibittheformationofthetoxicspeciesofamyloidandpriondiseasesbyusingdifferentstrategiesincludingsmall-moleculebindingandinteractionswithmolecularchaperones.
Fig I. Amyloidogenic proteins studied in the Hammarström lab. All proteins possess totally different native sequence and folds. Nevertheless all five proteins ultimately misfold into cross-beta-sheet structure of amyloid fibrils. The central image is a transmission electron micrograph of lysozyme amy-loid fibrils taken at 80000 fold magnification.
tHIopUrIne MetHyltransFerase(TPMT)isapolymorphicenzymeandakeyenzymeintreatmentofchildhoodleukemiaandinflammatoryboweldiseasessuchasCrohn’sdisease.TPMTisoneofthefewclassicalexamplesofpharmacogeneticswherethedosagesofmedicaldrugsaredirectlydependentonthepolymorphismoftheenzyme. IncollaborationwithDepartmentofClinicalPharmacologyatUniversityHospitalinLinköpingmutantsofdifferentvariantsareengineeredandbiophysicallycharacterized,usingarepertoireoftechniquessuchasenzymeactivitymeasure-ments,circulardichroism,fluorescenceanddifferentialscan-ningcalorimetry. Inparallelwearealsoscreeningconditionstocrystallizethevariousvariants.
Fig II: Structures of Thiopurine methyltransferase (TPMT) with cofactor SAH (red)
scIentIFIc brancH oF
ch
em
ist
ry
IFM actIvIty report 2012 47
proteIn-proteIn InteractIonsareintrinsictovirtuallyeverycellularprocess.Wearestudyingtheinteractionofthecellu-larreceptortissuefactor(TF)withthecoagulationfactorsVII(FVII)andX(FX)thatisthekeystepintheinitiationofbloodclottingandthrombusformation.TheinformationoutputfromthisprojectwilldirectlybeusedindrugdesignoftherapeuticagentsthatcaninterveneintheassociationprocessofFVIIandFXtoTF.
Molecular biotechnology staFFProfessors:Bengt-Harald”Nalle”Jonsson,MariaSunnerhagenAssistant Professors:PatrikLundström,MartinKarlssonAssociate Professor:Ann-ChristinBrorssonPost-docs:LottaTegler,CeciliaAndrésen,TheresaLindholmPhDstudents:CeciliaAndrésen,Anna-LenaGöransson,JuttaSpeda,LindaHelmfors,SaraHelander,AlexandraAhlner,AnnicaBlissing,MadhanAnandapadmanaban.MikaelaEliassonAdministrator:SusanneAndersson
actIvItIesTheresearchactivitiesinmolecularbiotechnologyarefocussedondetailedcharacterizationsofproteinstructureanddyna-micsatthemolecularlevel.Theroleofproteininteractionsforunderstandingavarietyofbiologicalfunctionsareaddressedindifferentprojects.Theresultswhicharegleanedfromourstudiesofthesefundamentalbiologicalphenomenaarealsoutilizedinprojects,whichaimatefficientdiagnosisandnovelstrategiesfortreatmentofsomehumandiseases.
tHe proteIn MIsFoldIng dIsease als:Themis-foldingandintracellularaggregationoftheproteinsuperoxidedismutaseisstronglycoupledtotheneurodegenerativediseaseALS.TofindthemolecularbasisforALSweperformadetailedcharacteri-zationofthestructuralanddynamicaleffectsofalargesetofdifferentALS-associatedmutationsinthegeneforCuZnSOD.Therefore,wehaveusedchemicalcross-linking,analyticalultra-centrifugationandhydrogen/deuterium-exchangeexperi-mentstounraveltheeffectsofthemutationsonthedynamicsoftheprotein.
proteIn-sUrFace InteractIons.Enzymesareofincreasinguseinbiotechnologicalapplications.Regardlessoftheapplica-tion,theenzymeswillalwaysencountersurfacesandthiswilloftenleadtothattheenzymeactivityislost.Ithasbeenalongstandingperceptionthat”soft”proteinsareproteinsthatbindto,andunfoldsat,surfacesevenwhentherearenoapparentattractiveforcebetweentheproteinandthesurface.Thereishoweverlittleknowledgeaboutwhichfeaturesofaproteinthatdictateswhetheraproteinwillbehaveasa“soft”proteinora“hard”protein,althoughthephysicalstabilityoftheproteinisbelievedtoplayacrucialpart.Inordertodiscriminatebetweentheimportanceofthermodynamicstabilityandkineticstabi-litywehaveengineeredproteinvariantswiththesepropertiesseparated.Ouraimistopinpointwhichfeatureisthemostimportantsothatthecorrectmodificationscanbeperformedonproteinsthataretobeusedinvariousbiotechnologicalapplications.
stabIlIzatIon oF carbonIc anHydrase.AtthistimethereisaconsensusviewthattheconcentrationofCO2intheatmosphe-reisthemajorcontributortoincreasingglobalwarmingandmucheffortisdirectedtofindmethodsforcarboncaptureandsequestration(CCS).However,nomethodhasthusfarprovedtobepracticallyoreconomicallyfeasible.Sincethenaturalfunctionofcarbonicanhydrasesistofacilitatetheremovalofcarbondioxidefromthebloodithasbeensuggestedthatcarbo-nicanhydrasescanbeusedasbiologicalcatalystsinbioreactorsdesignedforcapturingCO2fromvariousgasstreams.Howe-ver,therearenonaturallyoccurringcarbonicanhydrasesthathavehighenoughstabilitytobeusedinsuchabioreactor.Wearethereforecurrentlyworkingonthedesignofengineeredhumancarbonicanhydraseswithincreasedstabilitywhichcanthenbeusedascatalystsinenzymebasedbioreactorsforcarboncaptureandsequestration.
FUnctIonalIzatIon oF nanopartIcles by peptIde desIgn:Earlierstudieshavegivenusafirmknowledgeaboutthestructureofanddynamicsinproteinsuponadsorptiontosolidsurfaces.Recentlywehaveunraveledfundamentalprinciplesthatgoverntheformationofhelicalstructureonsilicananopar-ticles,whichisimportantinthedevelopmentofdevicesthatinteractwithbiologicalsystems.
alzHeIMer’s dIsease:TheaimofthisprojectistoperformdetailstudiesofthemolecularoriginsofAlzheimer’sdisease(AD).Theaggregationprocessoftheamyloidβpeptide(as-sociatedwithAD)isstudiedbyusingDrosophilamelanogasterasamodelorganism,inparallelwithbiophysicalstudies.Thechallengeistoidentifyandcharacterizetoxicspeciesaswellastostudytheinfluenceofcellularfactorsonthetoxicity.Thisknowledgewillthenbeusedtotesttheeffectofanti-aggrega-tionagentsinvitroaswellasinvivo.
lysozyMe aMyloIdosIs:Misfoldingandaggregationoflyso-zymeareassociatedwithlysozymeamyloidosiswhereabnor-maldepositionsofaggregatedproteinarefoundinorganssuchastheliver,spleenandkidney.ByexpressinglysozymeinDrosophilamelanogasterwecanstudytheaggregationoftheseproteinsinacomplexmulticellularenvironmentandlookintotheroleofspecificcellularfactorsandpathwaysinthepathogenesiscausedbylysozymemisfoldingandaggregation.ResultsfromstudiesusingthisDrosophilamodelsuggestthattheonsetoffamilialamyloiddiseaseislinkedtoaninabilityofthequalitycontrolsysteminthecelltocompletelydegradetheamyloidogeniclysozymespriortosecretion,resultinginsecre-tionofthesedestabilisedvariants,therebyleadingtodepositionandassociatedorgandamage.ratIonal enzyMe MInIng:Enzymesarebiologicalcatalyststhatfindtheiruseinalargenumberofbiotechnologicalapplica-tionsandenzymebasedindustrialprocessesareexpectedtoincreaseinthenearfuture.Onecentralconcerninordertorealizethepromiseofindustrialbiotechnologyisthentofindnewenzymesthatareactiveandstableattheconditionsofinterest.Inthisrespectmicroorganismsareanidealsourceofnovelenzymessincetheycansurviveandpropagateinmanyenvironments.However,tobeabletoscreenfullmicrobialcommunitiesfornewenzymesmethodsthatisindependentofpureculturingneedstobedeveloped.Wearecurrentlyworkingonthedevelopmentofsuchmethodstominefornewenzy-mesinmethanogenicmicrobialcommunitiesinexperimentalbiogasreactors.
ch
em
ist
ry
48 IFM actIvIty report 2012
enzyMatIc enHanceMent oF slUdge dIgestIbIlIty: Aspartnersofthecentreofexcellenceinbiogasresearch,recentlyestablis-hedatLiUwithsupportfromtheSwedishEnergyAgency,weareinvestigatingthepossibilitiestoenhancesludgedigesti-bilitywithenzymesforincreasedbiogasproduction.Theaimoftheresearchistodeterminewhetherenzymeadditiondefactoisafeasiblemethodtoincreasebiogasproduction.Forthis,itisnecessarytomonitorthefateofaddedenzymesbydeterminingtheactivity,modificationandlifetimeofeachtypeofaddedenzymeattheconditionsthatwouldprevailinareallifeprocess,ratherthansimplyobservingtheeffectinbiogasproduction.Thiscanthenbeusedtocorrelateenzymeactivitytoe.g.metaboliteturn-overandpossibleinactivationmecha-nismsofaddedenzymes.Thiswillalsogiveinformationaboute.g.whichofthemanycommerciallyavailableenzymeswhicharethemostsuitablefortheintendedprocess.
bacterIal and IMMUnologIcal responses In InFectIoUs dIsease.ThehumanRo52proteinisanautoimmunetargetinSjögren’sdisease,andinvolvedintheproductionoffetalantibodiesinpregnantmothers.Wehavecharacterisedtheinteractionofthedisease-relatedantibodiesandarecurrentlycharacterizingthesubdomainsofRo52andtheirinteractionsonamolecularlevel.
OurmostrecentresultsshowthatpatientautoantibodiesthathinderubiquitinationinterferewiththeE2-bindingsurfaceoftheE3-activeRINGdomainofRo52.Takentogetherwithourpreviousstudies,wecannowproposeanactionmodelfortheentireRo52protein(FigIII,below)MexRisaDNA_bindingproteinthatregulatestheexpressionofthePseudomonasAeruginosaeffluxpump,andatargetforantibioticresistancemutationsleadingtomulti-drugresistance.Wehavedescribedthebiophysicalandmolecularbasisforresistanceandarecur-rentlyevaluatingtheirimplicationsonstructure.
Fig III
strUctUral bIology In cancer developMent and protectIon.Theoldestcharacterizedoncogene,c-Myc,housesaseriesoffatalhotspotmutationsitesleadingtoincreasedtumordeve-lopment.Wehavecharacterizedthestructuralpropertiesofthetransactivationdomainwhich,surprisingly,adoptsamolten
globulestructure,perhapsaprerequisiteforitshigh-affinitybindingtoarangeofbiologicallyimportanttargetproteins.Arangeofproteininteractionsarecurrentlybeingscreenedonastructurallevel.
strUctUral bIology In cancer and InFectIoUs dIseaseThegroupofMariaSunnerhageniscurrentlydescribingaseriesofintrinsicallydisorderedinteractionsbetweenthec-Myctrans-activatingdomainanditsregulatoryco-partners,includingBin1andTBP,usingbothNMRandcrystallography.TheRo52/Trim21regulatorynetworkincludingE2ligasesUbch6andUbch8isaddressedusingarangeofbiophysicalandbiochemi-caltechniques.InourPseudomonasAeruginosaproject,aimedtoinvestigateprinciplesfornovelantibiotics,severalnovelpro-teinstructureshavebeendeterminedandmoleculardynamicssimulationsrevealnovelprinciplesforhowmutationsresultinantibioticsresistance
regUlatIon oF KInase actIvIty.Ephproteinsareinvolvedindevelopmentalprocessessuchascellmigration,angiogenesisandaxonguidanceandintheadultorganismtheyhavebeenimplicatedincertaincancers.ThecrystalstructureofthekinasedomainofEphB2aswellasthoseofotherEphproteinssuggeststhattheground-statecannotbecatalyticallyactive.Ourworkinghypothesisisthatalow-populated“excited”stateisresponsibleforcatalysisandwehaveshownthattheproteinexchangesbetweentheground-stateandsomethingelseonthemillisecondtime-scale.WearecurrentlyusingNMRspectros-copyandx-raycrystallographytofurtherstudytheinterplayofstructureanddynamicsforthisunusualmodeofenzymeregulation.
organic chemistrystaFFProfessors:PeterKonradsson,IngemarKvarnströmAssociate professor:StefanSvenssonAssistant professor: PeterNilssonSenior researcher:ÅsaRosenquistPost-doc:MarcusBäck,AndersDahlgren,HamidShiraniTechnician:MikaelaErikssonPhDstudents:AlmaÅslund,TimmyFyrner,VeronicaSandgren,RogerGabrielsson,RozalynSimon,TheréseKlingstedt,LeifJohansson,KarinMagnusson,KatriannArjaandMathiasElgland.Administrator:SusanneAndersson
actIvItIesSynthesisoffunctionalizedoligothiophenederivativeswithspecificopticalandelectronicproperties:Bycombiningthefeaturesofpolymersandtheelectro-opticalpropertiesofconju-gatedmolecules,conjugatedpolymerssuitableforawiderangeofapplications,suchassolarcells,displaysandbiosensorsarecreated.Ourresearchismainlyfocusedoncreatingwell-definedoligothiophenederivativesthroughrationalchemicaldesign(Seefigurebelow,andhighlight)Asafirstinstancewearesynthesizingoligothiophenesthatcan
ch
em
ist
ry
IFM actIvIty report 2012 49
beutilizedastoolsforstudyingbiologicalandpathologicalpro-cess.Theaimoftheseprojectsaremainlytoprovidemoleculartoolsthatcanbeusedforrealtimeinvivoimagingofbiologicaleventsfromthenanoscopiclevel(biomoleculesandcells)tothemacroscopiclevel(organsandbody).Secondly,wearealsoinvestigatingifsimilarmolecularscaffoldscanbeutilizedastherapeuticactiveagentstowardsdistinctpathologicalproces-ses.Furthermore,wearedevelopingelectro-activeoligothiophenederivativesthatcanbecombinedwithdefinedbiologicaltemp-latemolecules,suchasamyloidfibrils,togeneratematerialsthatcanbeimplementedwithinresearchareassuchasnano-bioelectronics.ThoughamultidisciplinarycollaborationwithotherresearchersatIFMandITN,weareaimingatdevelopnovelmaterialsthatcanbeusedforelectronicreleaseofpha-rameuticals,anddevicesthatcanstimulateandrecordcellularactivityincomplexenvironments.
Fig IV: General chemical structure of functionalized oligothiophene deriva-tives.
syntHesIs oF potentIal protease InHIbItors:Proteasesareenzymescapableofrestructuringpeptidesandproteinsbyspe-cifichydrolysisandarethereforepowerfulmediatorsforhealthanddisease.Therearefivedifferentclassesofproteases,clas-sifiedaccordingtothemostsignificantfunctionalgroupintheactivesiteoftheenzyme.Designandsynthesisofinhibitorsandscreeningforefficientandselectiveinhibitorsofkeypro-teaseshavebecomeanattractiveandpowerfulcoursefornewdrugdevelopment.Thisisanareaoffundamentalimportancetothepharmaceuticalindustry.Structurebaseddrugdesignhasbeenusedinthesearchforpotentandselectivedrugcan-didates.Animportantpartofthisistofindtheminimumne-cessarychemicalfeaturesforbindingtoaparticularprotease.Methodsforscreeningofpotentialinhibitorsareavailableanditispossibletoscreenlargelibrariesofsinglecompoundstoidentifyleadcompounds.Designandsynthesisofinhibitorshavebeenstudiedagainstthefollowingproteases:HIV-1pro-tease,HepatitCprotease,Malariaparasiteproteases,Thrombinandγ–Secretase(Alzeimersdisease).TheresearchprojectsaredoneincollaborationwiththeUniversityofStockholm,BMC,UppsalaandMedivirAB,Huddinge.
physical chemistrystaFFProfessor: LarsOjamäePost-doc:AnnikaLenzPhDstudent:YuanLiu
actIvItIesTheresearchprojectsconcerncomputational-chemistrystudiesofnanostructures,functionalizednanoparticles,dye-sensitizedmetaloxidesolarcells,electrontransferprocesses,hetero-geneouscatalysis,andwaterandhydrogenbondingpheno-mena.Wetherebyapplyquantum-chemicalcomputationsandmolecular-dynamicssimulationsusingnationalsupercomputerfacilitiestoaddressthesefundamentalissuesinsurfacescienceandatmosphericchemistry.Nanoparticlesexhibitmanyuniqueproperties.WemodelcrystallitesofmaterialssuchasZnO,TiO2,RuO2andGd2O3andquantumdotsofGaN,whichareofinterestinapplicationsrangingfromnanomedicinetooptoelectronics.Inparticularwedesignnovelnanocompundsbyfunctionalisingmetaloxidenanoparticlesusingorganicadsorbates.Onesuchexampleisthedye-sensitisedsolarcell,whereorganicmoleculesarechemisorbedatananostructuredmetal-oxidesurface(ZnO,TiO2).Catalyticreactionsatmetal-oxidesurfaces(RuO2)arealsostudied,wherewearedevelopingabinitioMDmethodsthatareusefulforelucidatingthemechanismsofsurface-catalyzedreactions.
Fig V: A self-assembled monolayer (SAM) of MPTMS on a ZnO surface.
Anotherresearchthemeconcernshydrogenbonding,whereweareelucidatingthephasetransitionsandproton-orderingphenomenainvolvingwaterclusters,liquidwater,iceandclathratecrystals.Theseinvestigationsareofimportanceforunderstandingforexamplethepropertiesofliquids,environ-mentalprocessesoccurringintheatmosphere,andCO2emis-sionfromthetundra.
ch
em
ist
ry
50 IFM actIvIty report 2012
Inorganic chemistry
staFF:Professor:Per-OlovKällAssistant Professor: FredrikSöderlindAssociate Professor:HenrikPedersen
actIvItIesTheresearchininorganicchemistryatIFMismainlyfocusedoncolloidalsynthesisandcharacterisationof(i)magneticmetaloxidenanoparticles(e.g.Gd2O3)formagneticresonanceimaging;(ii)chemicalorelectrochemicalsynthesisofsemicon-ductingnanoparticles,e.g.ZnO,CuO,Cu,assensingmaterialingassensingstudiesof,e.g.,ofO2,NOx,CO,H2,MeOH.Theaboveprojectsarepronouncedinterdisciplinarywithcol-laborationpartnersbothwithinandoutsideIFM.
(i)Severaloftherareearthmetalsarestronglymagneticandatleastoneofthem,gadolinium,isauniquebecauseitcombinesahighmagneticmomentwithaveryhighcross-sectionforthermalneutrons,implyingthatGd(III)containingnanocrys-talsarepotentiallyinterestingbothascontrastagentinmag-neticresonanceimaging(MRI)andneutroncapturetherapy(NCT).WehavefoundthatsmallnanocrystalsofcubicGd2O3producesignificantlyshorterT1relaxationtimesthantheconventionalgadoliniumcontainingchelatesnormallyusedinexaminationofpatients.Apossibleexplanationoftheeffectisthehigherdensityofmagneticactiveionsinananoparticlecomparedtothatofabulkychelateprovidingaccessofonlyasinglewatermoleculetothemagneticcentralatom.
(ii)AnovelsensingprojectcarriedoutincollaborationwithProfs.AnitaLloyd-SpetzandLarsOjamäeisthedevelopmentofaSiCbasedmethanolsensorforapplicationunderdeman-dingconditions.TwoarticleshavesofarbeenpublishedinSensorsandActuators:ChemicalwherePtandIrhavebeentestedassensingmaterials.
(iii)Duringtheyear,anewprojecthasbeenstartedincollabo-rationwithProfs.MagnusOdénattheDiv.ofNanostructuredmaterials,andLarsOjamäeatPhysicalchemistry.TheprojectwhichispartlyfundedbyKAWaimsattheexperimentalandtheoreticalstudyofcatalytichydrogenationofCO2intheformationofmethanolordimethylether.Sofarahighpres-surereactor(autoclave)andaGChasbeeninstalled,anMStobeconnectedwiththeGCpresentlybeingunderpurchase(seefigVI)
Fig VI: Autoclave connected to GC
analytical chemistry staFFProfessor: ElkeSchwedaAssociate Professor:JohanDahlén
actIvItIesResearchinAnalyticalChemistryisfocusedonanalyticalcarbohydratechemistryandstudiesstructuresofbiologicallyactivecarbohydratesfrompathogenicbacteria.Ofparticularinterestaretheexclusivelyhumanpathogennon-typeableHae-mophilusinfluenzae(NTHi)andHelicobacterbizzozeronii,whichnormallycolonizescatsanddogs.Humanspotentiallyacquiregastricinfectionsasaconsequenceofdirectcontactwiththeseanimals.NTHicausesotitismediaandbothacuteandchroniclowerrespiratorytractinfectionsinsmallchild-ren.ThepotentialofbothNTHiandH.bizzozeroniitocausediseasedependsupontheirsurfaceexpressedcarbohydrateantigen,lipopolysaccharide(LPS).
TheheterogeneityandstructuralcomplexityofLPSfrompat-hogenicbacteriaposesignificantanalyticalchallenges.Typi-cally,structuralprofilinginvolvesanalysesbychemical,nuclearmagneticresonance(NMR)andmassspectrometric(MS)methods.Electrosprayionizationmassspectrometry(ESI-MS)hasplayedanincreasinglyimportantroleinthecharacteriza-tionofLPS.
cHeMIstry-HIgHlIgHtsI.JohanDahlénhasbeenappointedassociateprofessorinanalyticalchemistry
II.HenrikPedersenhasbeenappointedassociateprofessorininorganicchemistryIII.AstudyfromtheHammarströmlabincollaborationwiththeNilssonandThorlabsshowedthatCurcumin,asubstanceextractedfromturmeric,prolongslifeandenhancesactivityoffruitflieswithanervousdisordersimilartoAlzheimer’sdisease.
ch
em
ist
ry
IFM actIvIty report 2012 51
Alzheimer’sdisease,whichischaracterizedbytheaccumula-tionofstickyamyloid-betaandTauproteinamyloidfibrils.Linköpingresearcherswantedtoinvestigatehowthesubstanceaffectedtransgenicfruitflies(Drosophilamelanogaster),whichdevelopedevidentAlzheimer’ssymptoms.Fliesshwoedenhancedactivity,deceasedneurotoxicityandlivedupto75%longerwhentreatedwithcurcumin.However,surprisinglytheamountofamyloidinthebrainoreyesdidnotdecrease.Curcumindidnotdissolvetheamyloidplaque;onthecontraryitacceleratedtheformationofmaturefibrilsbyreducingtheamountoftheirprecursorforms,knownasoligomers. Thestudyhence,indicatesthatitistheinitialstagesoffibrilformationandfragmentsoftheamyloidfibrilsthataremosttoxictoneuronsandthatcurcuminacceleratedthisconversionstep. Thearticle“CurcuminpromotesA-betafibrillationandreducesneurotoxicityintransgenicDrosophila”.waspublis-hedinPLoSOne(2012).InaCaesar,MariaJonson,K.Peter,R.Nilsson,StefanThorandPerHammarströmPLoSOne.2012;7(2):e31424.doi:10.1371/journal.pone.0031424.
Figure. Survival curves for ”Alzheimer flies” treated (dashed line) and those not treated with curcumin. The flies that were administered curcumin lived longer and were more active. The scientists identified an accelerated formation of amyloid plaque in the treated flies, which seemed to protect the nerve cells. On the right we see microscopic images of neurons (blue) and plaque (green) in the fruit fly’s brain. The study strengthens the hypothesis that a curcumin-based drug can contribute to toxic fibrils being encapsula-ted (bottom left of the figure).
IV.AstudyfromNilssonlabincollaborationwithHammar-strömandwithcolleaguesattheUniversityHospitalinZürich(Aguzzi)testedluminescentconjugatedpolymers,orLCPs,onorganotypiclivetissuesectionsfromthebrainsofmicethathadbeeninfectedwithprions.Theresultsshowthatthenumberofprions,aswellastheirtoxicityandinfectibility,decreaseddrastically.Thisisthefirsttimeanyonehasbeenabletodemonstratethepossibilityoftreatingillnessessuchas“madcow”diseaseandCreutzfeldt-JacobswithLCPmolecules.Thecourseofpriondiseaseisrelentlesswhentheprionsfalltopiecesandreplicateatanexponentialrate.WhenresearchersinsertedtheLCPmoleculesintotheirmodelsystem,therepli-cationwasarrested,throughstabilizingtheprionaggregates–whichisanewconceptintreatingpriondisease.
Thearticle“Polythiophenesinhibitprionpropagationbysta-bilizingprionprotein(PrP)aggregates”waspublishedinTheJournalofBiologicalChemistry(2012)I.Margalith,C.Suter,B.Ballmer,P.Schwarz,C.Tiberi,T.Sonati,J.Falsig,S.Nyström,P.Hammarström,A.Åslund,K.P.R.Nilsson,A.Yam,E.Whitters,S.HornemannandA.AguzziJBiolChem.2012:1;287(23):18872-87.
V.ElkeSchwedaandcoworkershascharacterizedthestructu-raldiversityofthelipopolysaccharidefromtwoHaemophilusinfluenzaeestrains.VitiazevaVetalinCarbohydrateRes357(2012)98-110
VI.InastudybyAnnikaLenz,LarsOjamäeandcoworkersfromFOIandLundUniversitythereactionmechanismofDNTdecompositiononplatinumnanoparticleswaselucidated.Thisisofimportanceforunderstandingthedetectionofexplo-sivesbychemicalsensors. Thearticle“ComputationalstudyofthecatalyticeffectofplatinumonthedecompositionofDNT”byLenzA,Pohl,A,OjamäeL,PerssonP.waspublishedinIntern.J.QuantumChem.(2012)112:1852-1858.
VII.LarsOjamäeandPer-OlovKällaremembersofthe“De-signedNanoparticles”projectthatwasawardedamajorgrantfromtheKnutandAliceWallenbergFoundation.Theywillstudythecatalyticconversionofcarbondioxidetomethanolbytheuseofnovelnanoparticles.AnewPhDstudentinphysicalchemistrywillbeenrolledintheprojectin2013.
VIII.YuanLiuobtainedagrantfromtheChinaScholarshipCounciltojoinLarsOjamäe’sgroupasaPhDstudent,whichhedidinOctober2012.HisstudieswillfocusonCH4andCO2iceclathratestructuresandtheirimplicationsforatmosphericchemistryandforcarbondioxidestorage.
ch
em
ist
ry
52 IFM actIvIty report 2012
scIentIFIc brancH oF
Material Physicsgeneral InForMatIon
steerIng coMMIttee LarsHultman(Head),ErikJanzén(DeputyHead),WeiminChen,UlfHelmersson,MagnusOdén,andRogerUhrberg.
researcH dIvIsIons and proFessors Functional Electronic Materials: WeiminChen,HeadIrinaBuyanovaNanostructured Materials:MagnusOdén,HeadBoJansson(AdjunctSECOToolsAB,deceased)Plasma and Coatings Physics:UlfHelmersson,HeadNilsBrenning(AdjunctfromKTH,Stockholm)Semiconductor Materials:ErikJanzén,HeadPederBergmanAnneHenryPer-OlofHoltzLeifJohanssonRositzaYakimova(Emerita)BoMonemar(Emeritus)Surface and Semiconductor Physics:RogerUhrberg,HeadGöranHansson(PrefectofIFM)Wei-XinNiThin Film Physics:LarsHultman,HeadJensBirch,DeputyHeadEstebanBroitman(GuestProf.Carnegie-Mellon)JosephEGreene(GuestProf.,Univ.Illinois)IvanPetrov(GuestProf.,Univ.Illinois)MichelBarsoum(GuestProf.,DrexelUniv.)
IndIvIdUal and coordInated excellence researcH prograMsGovernment Strategic Grant (SFO) for Materials• ERCAdvancedGrant(Hultman)• ERCStartingGrant(Rosén)• KAWProjectIsotopicControl-UltimateProperties(Janzén,
Hultman,Greene,Abrikosov)• KAWScholarGrant(Hultman)• KAWAcademyFellow(Rosén)• ESFEpitaxialGrapheneEPIGRAT(Janzénetal)• EDA/FMVGaNHEMTMANGA(Janzénetal.)• EUEuSiC(Janzénetal.)• VRLinnaeusCenterLiLi-NFM(Hultmanetal.)• VR/RÅCCoordinatedProgramGrantMaterialsScienceus-
ingHigh-EnergyX-Rays(Birchetal.)• VRSiCMaterialforPowerelectronics(Janzén)• VINNEXCenterFunMat(Hultmanetal.)• NordicResearchCenterSIMARC(Chenetal.)• SSFCoordinatedGrantinMaterialsScienceMultiFilms
(Odénetal.)• SSFNano-N(Holtzetal.)
• SSFSynergyGrantFUNCASE(Hultmanetal.)• SSFproject:III-nitridesforUVandhighfrequencyapplica-
tions(Janzénetal.)• SSFproject:SiC–theMaterialforEnergy-SavingPower
Electronics(Janzénetal.)• TheLinköpingCenterforNanoscience&Nanotechnology
CeNano(Hultman,Chair)• FP7EUproject:Nano-RF(PIR.Yakimova)
sUMMary oF actIvItIesTheMaterialPhysicsAreaisthelargestresearchunitoftheFacultyandisinternationallyrecognizedasastrongresearchenvironment.Itengages~150persons,includingover60PhDstudents. Theresearchisofabasicexperimentalcharacter,butdirectcollaborationwithindustryisessentialinmanyprojects.Theo-reticalmodellingisanaturalpartofmanyprojects. Theresearchactivitiesincludegrowthofavarietyofmaterialstructureswithdifferenttechniques,mainlyPVD,CVDandsublimation-based.Thematerialsstudiedspanabroadfield,suchasmetallicthinfilms,semiconductormaterials,nano-structures,andorganicstructures. Weoperateseveraladvancedlaboratories;mostlyincleanroomenvironment.Thecharacterizationtechniquesincludeelectronmicroscopy(SEM,TEM,FIB,EELS,PL,CL)andsur-facestudies(ARUPS,STM,AFM,XRR,ERDA,XPS),partlyatexternalsynchrotronradiationfacilities,butalsoextensivelyop-tical,transportandmagneticresonancetechniques.Collabora-tionwithforeignlaboratoriesistypicalforallresearchgroups;infactmostpublishedpapershaveinternationalco-authors.
edUcatIon In2012,11PhDtheseswerepublishedinourdivisions. Theresearchersareheavilyinvolvedinteachingonthebasicandadvancedlevelinphysics,materialsscience,andnanotech-nology(>30courses).~10coursesforPhDstudentsarealsogiveneachyear. ProfPOHoltzisDirectoroftheGraduateEducationatIFMincludingtheGraduateSchoolinMaterialsScience:AGORAMateriae. Prof.LIJohanssonretiredasDirectoroftheMasterEduca-tioninMaterialsPhysicsatLiTHandDirectorforundergradu-ateteachinginPhysicsatIFMin2012. WearehostfortheECErasmus-MundusgraduateschoolforMaterialScienceandEngineeringDocMase(Odénetal.) LarsHultmanwontheJuniorFacultyPrize2012atLiUforsupportingthecareersofjuniorresearchers,thuscreatingasustainableresearchenvironment
tecHnology transFer & pUblIc InteractIonDrGaliaPozinawontheIVA–RoyalSwedishAcademyofEngineeringSciences”Mentor4Research”Prize–acatalystsforCommercialization Ourresearchhasgeneratedhigh-techindustrieslikeNorstelABinNorrköping,producingSiCsubstrates,EpigressABinLund,producingSiCgrowthsystems,andImpactCoatingsABinLinköping,developingPVD-processesandequipmentforfunctionalanddecorativethinfilms.Aspin-outcompanyCyclopsABdevelopsanovelSiCepitaxialtool. WearealsopartoftheLiUFundRaisingCampaign;www.liu.se/expanding_excellence. Severalpatentapplicationswerefiledin2012.
HIgHlIgHts 2012LinkopingUniversityistakingpartintheGrapheneFlagshipramp-upstage,whichisfundedbyECwithintheFP7,tobring
ma
te
ria
l p
hy
sic
s
IFM actIvIty report 2012 53
thisamazingmaterialtorevolutionarysolutionsinhighspeedelectronics,medicaldiagnostics,spaceresearch,etc.Research-ersatIFMhavetheknowhowtoproducethebestgrapheneonsiliconcarbideworldwide.AgoaloftheGrapheneFlagship istobridgeresearchandcommercializationbycreatingnewandimprovedgrapheneproductstobeimplementedinadvancedapplications,whichwillbringvaluetothesociety.ThefirstEuropeancompanyonepitaxialgraphene(GraphensicAB)isoperatedoutofLinköping. Wehaveexperimentallydemonstratedthefirstspinampli-fieroperatingatroomtemperature-oneofthefundamentalbuildingblocksinspintronics.Thisdefect-engineeredspinamplifierisbasedonanon-magneticsemiconductorGa(In)NAs,withalargespingain(>2700%atzerofield)andahighcut-offfrequency(>1GHz).Adv. Mater. 25, 738 (2003) WereportedontheMagneticquantumratcheteffectingra-phene.Orbitaleffectsinthepresenceofanin-planemagneticfieldprovidestrongevidencefortheexistenceofstructureinversionasymmetryingraphene.Nature Nanotechnology 8, 104–107 (2013)
Functional electronic MaterialsstaffProfessors:WeiminChen,HeadofDivisionIrinaBuyanonaPost-docs and visiting scientists (>1 month):DanielDagnelund,JanStehr,AlexandrDobrovolsky,GalynaRudko,IgorVoronaPhD students:JanBeyer,ShulaChen,StanislavFilippov,YuttapoomPuttisongAdministrative/Technical staff:SusanneAndersson,Anna-KarinStål,ArneEklund
sUMMary oF actIvItIes Weconductscientificresearchonelectronic,magneticandopti-calpropertiesofsemiconductormaterialsandnanostructures.Thematerialssystemsunderstudyin2012include:(i)advancedspintronicmaterialsbasedonII-VIandIII-Vsemiconductors;(ii)ZnO-basedmaterialsandnanostructures;(iii)self-assembledInAs/GaAsquantumdot(QD)nanostructures;(iv)dilutenitrides;and(v)GaP/GaNPcore/shellnanowires(NWs).Theresearchhasbeencarriedoutmostlythroughclosecollabora-tionswithmanygroupsworldwide.Ouraimistoobtainabetterunderstandingoffundamentalphysicalpropertiesandagoodcontrolofmaterialsproperties,andtofullyexplorefunctional-ityofthestudiedmaterialsforapplicationsinfuturegenerationmicro-andnano-electronicsandphotonics,spintronics,aswellasinpotentialmultifunctionaldevicesandsystems. Intheareaofspintronicsemiconductors,wehavecontinuedandextendedstudiesofourrecentlydiscoveredroomtempera-turespin-filteringinanon-magneticsemiconductorGa(In)NAs.Thefocushasbeenondevelopmentofroom-temperaturespinamplifierandspindetectorbasedonGa(In)NAs.WehavealsostudiedmagneticinteractionsincoupledCdSe/ZnMnSeQDstructures.
IntheareaofZnO-basedmaterials,severaltopicsweread-dressed.Wehavecontinuedourstudiesofexcitondynamicsandexciton-photoncouplinginbulkandnanostructuredZnO.Wehavealsoinitiatedinvestigationsofnon-linearopticalandplas-moniceffectsinZnONWs.InbulkZnO,signaturesofexcitonsboundtoisoelectroniccenters-animportantclassofexcitonsanddefectsthathavesofarhardlybeeninvestigatedinZnO,wereprovided.Impactofvariousintrinsicdefectsonp-typedop-ingofZnOviaionimplantationwithphosphorousandnitrogenwerealsoexamined. In2012,wehaveconducteddetailedstudiesofspin-dependentpropertiesofself-assembledInAs/GaAsQD,QDmoleculesandrings.Specialattentionwaspaidtounderstandingthephysicalmechanismforspininjection,spinrelaxationandspindetection. FordilutenitrideslikeGa(In)NAsandGa(Al,In)NP,thepresenceofharmfulresidualdefectsisstilloneofthemajorobstaclespreventingthematerialsfrompracticalapplicationsinphotonicsandoptoelectronics.In2012,wehavecontinuedourexperimentaleffortstoidentifypointandinterfacialdefectsthatareresponsiblefordeterioratingopticalqualityofthematerials. WehavealsoinitiatednewresearchactivitiesonGaP/GaNPcore/shellNWs.Greatpotentialofthesestructuresasnano-sizedlightemitterswasdemonstratedbasedontheobservationofintenseemissionfromasingleNWatroomtemperature.OurcurrenteffortsaredevotedtoimprovingopticalefficiencyoftheNWsviaoptimizationoftheirstructuraldesignandmaterialquality. Wehavealsobeenactivelyinvolvedintheeducationprogramforundergraduatestudents.Duringtheyear,thecoursesin“SemiconductorTechnology”(TFYA39)and“PerspectivesonPhysics”(TFFM12)weregiven.
HIgHlIgHtsRoom-temperature electron spin amplifier based on Ga(In)NAs alloysThefirstexperimentaldemonstrationofaspinamplifieratroomtemperatureispresented.Anefficient,defect-enabledspinamplifierbasedonanon-magneticsemiconductorGa(In)NAsisproposedanddemonstrated,withalargespingain(upto2700%atzerofield)forconductionelectronsandahighcut-offfrequency>1GHz.[Adv.Mater.25,738(2013)]
Fig.1 A schematic picture of the demonstrated defect-engineered spin amplifier.
evIdence For coUplIng between excIton eMIssIons and sUr-Face plasMon In nI-coated zno nwsWeshowthatcoatingZnONWswithatransitionmetal,suchasNi,canincreasetheefficiencyoflightemissionatroomtemperature.Basedondetailedstructuralandopticalstudies,thisenhancementisattributedtoenergytransferbetweennear-band-edgeemissioninZnOandsurfaceplasmonsintheNifilmwhichleadstoanincreasedrateofthespontaneousemission.ItisalsoshownthattheNicoatingleadstoanenhancednon-radia-tiverecombinationviasurfacestates,whichbecomesincreasing-lyimportantatlowmeasurementtemperaturesandinannealedZnO/NiNWs.[Nanotechnology23,425201(2012)]
ma
te
ria
l p
hy
sic
s
54 IFM actIvIty report 2012
dynaMIc nUclear polarIzatIon and Its eFFect on electron spIn relaxatIon and depHasIng In Inas/gaas QdsElectronspindephasingandrelaxationduetohyperfineinteractionwithnuclearspinsisstudiedinanInAs/GaAsQDensembleasafunctionoftemperatureupto85K,inanappliedlongitudinalmagneticfield.Theextentofhyperfine-induceddephasingisfoundtodecrease,whereasdynamicnuclearpolarization(DNP)increaseswithincreasingtemperature.Weattributebotheffectstoanacceleratingelectronspinrelaxationthroughphonon-assistedelectron-nuclearspinflip-flopsdrivenbyhyperfineinteractions,whichcouldbecomethedominatingcontributiontoelectronspindepolarizationathightempera-tures.[Appl.Phys.Lett.100,143105(2012)]
MecHanIsM For radIatIve recoMbInatIon and deFect proper-tIes oF gap/ganp core/sHell nwsRecombinationprocessesinGaP/GaNPcore/shellNWsgrownonaSisubstratebymolecularbeamepitaxyareexaminedusingavarietyofopticalcharacterizationtechniques,includingcw-andtime-resolvedphotoluminescence(PL)andopticallydetectedmagneticresonance(ODMR).SuperioropticalqualityofthestructuresisdemonstratedbasedontheobservationofintenseemissionfromasingleNWatroomtemperature.ThisemissionisshowntooriginatefromradiativetransitionswithinN-relatedlocalizedstates.FromODMR,growthofGaP/GaNPNWsisalsofoundtofacilitateformationofcomplexdefectscontainingaPatomatitscorethatactascentersofcompetingrecombination.[Appl.Phys.Lett.101,163106(2012)]
sUb-MIllIsecond dynaMIc nUclear spIn HyperpolarIzatIon In a seMIcondUctor: a case stUdy FroM pIn antIsIte In InpODMRisemployedtoidentifykeyfactorsgoverningDNPinasemiconductor.WedemonstratethattheextentofDNPcanbeefficientlycontrolledbyvaryinglifetimeofthelocalizedelectronsthattransferspinangularmomentumtonuclei.TheultimatespeedofaDNPprocess,ontheotherhand,isdeterminedbythestrengthofhyperfineinteractionthatdrivesDNP.Weshowthatabout50%nuclearspinpolarizationofaPInantisiteinInPcanbeachievedbyshorteningelectronlifetimewithinaremarkablyshorttime(<0.1ms),seeFig.2,duetostronghyperfinecoupling.[Phys.Rev.B86,205202(2012)]
Fig.2 Rising curves of the PL and the ODMR signal (i.e. DNP) after σ+ excita-tion is switched on, by selecting the high-field ODMR line as indicated by the arrow in the insert.
eFFIcIent UpconvertIon oF pHotolUMInescence vIa two-pHoton-absorptIon In bUlK and nanorod znoEfficientupconversionofPLfromdonorboundexcitonsisrevealedinbulkandnanorodZnOandattributedtotwo-photon-absorption(TPA)andtwo-stepTPA(TS-TPA)processes.TheTS-TPAprocessisfoundtooccurviaadefect/impurity(ordefects/impurities)withanenergylevel(orlevels)lyingwithin1.14-1.56eVfromoneofthebandedges,withoutinvolvingphotonrecycling.OneofthepossibledefectcandidatescouldbeVZn.Asharpenergythreshold,differentfromthatforthecorrespond-ingone-photonabsorption,isobservedfortheTPAprocessandisexplainedintermsofselectionrulesfortheinvolvedopticaltransitions.[Appl.Phys.B:LasersandOptics108,919(2012)]
zeeMan splIttIng and dynaMIcs oF an IsoelectronIc boUnd excIton near tHe band edge oF znoComprehensivetime-resolvedPLandmagneto-opticalmeasure-mentsareperformedonaboundexciton(BX)linepeakingat3.3621eV(labeledasI*).ThoughtheenergypositionofI*lieswithinthesameenergyrangeasthatfordonorboundexciton(DX)transitions,itsbehaviorinanappliedmagneticfieldisfoundtobedistinctlydifferentfromthatobservedforDXs.Anexcitonboundtoanisoelectroniccenterwithahole-attractivelocalpotentialisshowntoprovideasatisfactorymodelthatcanaccountforallexperimentalresultsoftheI*transition.[Phys.Rev.B86,235205(2012)]
collaboratIonsWehaveactivescientificcooperationwithover20internationalgroups,includinganon-goingexchangeprogramsponsoredbytheSwedishInstitutethroughtheVisbyprogram(Inst.ofSemi-conductorPhysics,Ukraine,andA.F.IoffePhysico-TehnicalInstitute,Russia).
nanostructured MaterialsstaffProfessors:MagnusOdén,BoJansson*Assistant Professors:NaureenGhafoor,MatsJohanssonJöesaar,FredrikSöderlindPost-docs:KlaraAspGrönhagen,MohamedBallem,LinaRogströmPhD students:EmmaBjörk,AxelKnutsson,JianqiangZhu,JenniferUllbrand,RickardForsén,NiklasNorrby,TorkelStenqvist,RobertPilemalm,SusanneSveen,NinaShulumba,IsabellaSchramm,JeniferBarrirero,KumarYalamanchili,JingYang,AylinAtakan,SyedBilalDiploma students:HassanAdminstrative and Technical staff:ThereseDannetun,Karl-OlofBrolin*Died Feb 2012
ma
te
ria
l p
hy
sic
s
IFM actIvIty report 2012 55
general InForMatIon ThedivisionofNanostructuredMaterialswasestablished1April2007asaresponsetoseveralresearchcentersbeinggrantedatthattime(i.e.Vinnova-FunMat,VR-LiLi-NFM,andSSF-MS2E).In2009SSFgrantedthegroupanadditionalMaterialScienceprogramcalledMultiFilmsand2010anErasmus-Mundusgraduateschool,DocMase,withsupportfromECfor20stu-dentswasadded.NaturallymostoftheNanostructuredMateri-alsgroup’sresearchactivitiesarerelatedtothesecentersandprograms.Thescientificaimofthegroupconformstothematerialsci-enceparadigm:understandingofthesynthesis,microstructureevolution,andmaterialpropertiesofnanostructuredmaterialsofindustrialinterest.
researcH prograMsHard coatings:Thethermomechanicalpropertiesofnanostructuredreactivearcevaporatedceramicmaterialsarestudiedinmodelsystemsthatincludeamiscibilitygap.Specialinterestispaidtothekinet-icsofthedecompositionprocessinhardcoatingsandhowitisinfluencedbytheenvironment.HereweusehighenergySAXS,andDSCastoolstoinsitustudytheformationofnm-sizedparticleswithinthesolidsolution.STEMand3D-atomprobeincombinationwithphasefieldandab-initiocalculationsareusedtofurtheradvancetheunderstanding.Anexampleofarecon-structed3D-atomprobeimageofamultilayerisgiveninthefigurebelow,i.enanocandy.
Inadditionthemicrostructureevolutionofalloyedcathodesur-facesarealsostudied.
Mesoporous materials: Synthesisofseveraltypesofporestructureswithavariableporesize(30-300Å)basedonmicellesandhowtousethesemes-oporousmaterialsaschemicalmicroreactors.Ofspecialinterestistousetheseframeworkstosynthesizenanoparticleswithnar-rowsizedistributions.
Engineering materials: Applicationbasedresearchonsurfacebehaviorrelatedtotribol-ogyatelevatedtemperatureandbrazing.
scIentIFIc HIgHlIgHtsTwo PhD graduated:LinaRogström:“HightemperaturebehaviorofarcevaporatedZrAlNandTiAlNfilms”AxelKnutsson:“ThermalstabilityandmechanicalpropertiesofTiAlN-basedmonolithicandmultilayercoatings”Three Licentiate theses defended:NiklasNorrby:“HighpressureandhightemperatureeffectsofTiAlN”
RikardForsén:“MechanicalpropertiesandthermalstabilityofarcevaporatedTi-Cr-Al-Ncoatings”JenniferUllbrand:“Phasefieldmodelingofspinodaldecomposi-tioninTiAlN”
DiscoveredsurfacedirectedspinodaldecompositioninTiAlN,seefigure,whereacompositionalwaveoriginatesatinternalinterfaces.
TheinfluenceofgrowthconditionsandchemicalcompositiononZrAlNcoatingswasdetermined.Thefigureshowstheresult-ingphenomenoligicphasediagram.
Wefoundanewroutetoincreasedhardnessathightempera-turesinmetastablemultilayercoatings.Thefigureshowstheimprovedhardnessatveryhightemperatures.
ma
te
ria
l p
hy
sic
s
56 IFM actIvIty report 2012
plasma & coatings physicsstaffUlfHelmersson,ProfessorNilsBrenning,Guest ProfessorKostasSarakinos,Associate ProfessorDanielSöderström,Assistant ProfessorIrisPilch,Post-doctorMattiasSamuelsson,PhD-studentMontriAiempanakit,PhD-studentAsimAijaz,PhD-studentDanielMagnfält,PhD-studentViktorElofsson,PhD-studentBoLü,PhD-studentMartaSaraiva,Visiting ScientistRobertBoyd, Research EngineerSankaraPillay,R&D Project ManagerMikaelAmlé,Administrative Assistant
assocIate MeMbers DanielLundin,CEOatIonauticsABPeterMünger,DocentintheTheory&ModelingDivision,IFM
IntrodUctIonThePlasma&CoatingsPhysicsgroupisadivisionattheDe-partmentofPhysics,ChemistryandBiology(IFM),LinköpingUniversity,Sweden.Ouroverallgoalistocontributetowardsad-dressingchallengesofcontemporarymaterialsscienceandtech-nologythroughthesynthesisofnovelfilmsandnanomaterials.Torealizethisgoal,weemployinnovativeprocesseswhichallowforthegenerationofplasmaswithuniquepropertiesaswellascontrolofthematerialsynthesisattheatomiclevel.Throughacombinationofadvancedexperimentalandtheoreticaltoolsweseektounderstandtheprocess-plasma-materialinteractionsandgaininsightintotheknowledge-basedsynthesisoffunctionalfilmsandnanomaterials.
scIentIFIc HIgHlIgHts In 2012Nanoparticles: Synthesis & characterizationOurnovelhighpowerpulsed-plasmabasedmethodforsynthe-sizingnanoparticles(particleswithsizesintherangeofafewtohundredsofnanometers)wasdevelopedfurtherduring2012.Themethodallowsforthesynthesisofnanoparticlesofawiderangeofmaterialswithanarrowsizedistribution.Thepastyear,wehavefocusedonthematerials(silverandcopper)andhowtheprocessparametersandthegeometryoftheexperimentalset-upaffectthenanoparticlegrowth.Itwasfoundthatthedif-ferentgeometriesoftheexperimentalset-upgreatlyaffecte.g.thesizesofthenanoparticles.Togetafastresponseonthemassofthesynthesizedandcollectednanoparticleswhentheprocessparametersarechanged,researchonusingaquartzcrystalmicrobalance(QCM)forthispurposewasinitiated.PreliminaryresultsshowthattheQCMcanbeavaluabletooltodetermine“sweetspots”fortheprocess(seeFig.1).
Fig. 1. Deposited mass of nanoparticles as a function of pulse frequency for different peak currents. The pulse width was 30µs and the pressure 0.8 Torr.
Anewcompactvacuumsystemforthesynthesisofnanoparti-cleswasprocuredduringtheyear.Itwillbedevotedtothesyn-thesisofoxidenanoparticles,e.g.copperandzirconiumoxides,whichwillfindapplicationsinprojectsthatarerunincollabora-tionwithothergroupsattheuniversity. Workonacomputersimulationofthenanoparticlegrowthinahighlyionizedplasmawasinitiated.Thecomputermodelwillallowustoseehowtheplasmaparameterswillaffectthecollec-tionefficiencyofionizedmaterialtothenanoparticles,andwillhelpustounderstandthefundamentalprocessesweobserveintheexperiments.Amanuscriptisplannedtobesubmitteddur-ingthefirsthalfof2013. Researchoncore-shellnanoparticleswascontinuedwithamajorre-designofthesynthesischamber.Wenowhavetheopportunitytoaccuratelysiftready-madeparticlesthroughourcoatingzone.Thisallowsustostudythecoatingofnanoparticlesbeforewecombinetheprocessestosynthesizeboththecoreandtheshellinacontinuousprocess. Duringtheyear,twomanuscriptsweresubmittedtopeer-reviewedjournals.
Control of film nucleation and growth using ionized pulsed vapor fluxesWehaveusedpulsed,ionizedfluxesgeneratedbyaHiPIMSdischargetodepositAgfilmsonSiO2substrates.Wehavefoundthatthetimedomainofthedepositionflux(controlledbythepulsingfrequency),theinstantaneousvaporarrivalrateandtheenergyofthefilmformingspecies(controlbythepulseenergy)enableonetotailorfilmnucleationandgrowth,manifestedbythechangesinthefilmthicknessrequiredforthecompletionofthefilmcoalescence(Fig.2). Reference:D.Magnfältetal.,“Time-domainandenergeticbombardmenteffectsonthenucleationandcoalescenceofthinmetalfilmsonamorphoussubstrates”,submittedforpublica-tion.
ma
te
ria
l p
hy
sic
s
IFM actIvIty report 2012 57
Fig. 2. (a) Effect of pulsing frequency, f, on the coalescence completion thickness at pulse energy, Ep, values of 20 (squares), 40 (circles) and 60 mJ (triangles). (b) Dependence of coalescence completion thickness on deposi-tion rate during pulsed (Ep=20 mJ, f=50 Hz/squares) and continuous (DCMS/circles) deposition. (c) Effect of pulse energy (at constant f=50 Hz) on the coa-lescence completion thickness. In all cases coalescence completion thickness values calculated from the intrinsic stress measurements are plotted.
Atomistic mechanisms for stress generation in physically vapor deposited filmsWehavestudiedthestressevolutioninMofilmsgrownbyHiPIMS.Wehavefoundthat,dependingontheenergeticbom-bardmentencounteredbythegrowingfilm(controlledbytheprocessconditions),filmswithintrinsicstressesrangingfromhighlycompressivetoslightlytensileareobtained.Nocorrela-tionbetweenthestressandthestress-freelatticeparameterhasbeenobserved(TableI)indicatingnochangesintheconcentra-tionofintra-grainpointdefects.Onthecontrary,compressivestressgenerationisassociatedwithincreaseofthefilmmassdensity(TableI).Basedontheseresults,wehaveconcludedthatcompressivestressesaregeneratedviagrainboundarydensifica-tionthroughincorporationoffilmformingspecies.Atomisticmechanismsthatleadtodiffusionoffilmformingspeciesintograinboundarieshavebeensuggested. Reference:D.Magnfältetal.,“Atomisticmechanismsleadingtoinsertionofadatomsintograinboundariesandcompressivestressgenerationinphysicallyvapordepositedfilm”,infinalpreparation.
TableI.Effectofdepositionconditions(pwandPTp)onstress(σ),stressfreelatticeconstant(a0),andfilmmassdensity(ρm)
pw (Pa) PTp (kW) σ (GPa) a0 (Å) ρm (gcm-3)
0.16 152 -3.0±0.4 3.152± 0.003 10.29
0.4 66.4 -2.4±0.3 3.151± 0.003 10.205
0.16 45.5 -2.3±0.2 3.151± 0.002 10.11
0.4 28 -1.4±0.2 3.150± 0.002 9.9
0.4 16 +0.2±0.2 3.150± 0.003 9.82
0.4 4.5 0±0.2 3.151± 0.003 9.86
Tilt of the columnar microstructure in off-normally deposited films using highly ionized vapor fluxes
WehaveinvestigatedthetiltofthecolumnarmicrostructureinCuandCrfilmsdepositedoff-normallyfromhighlyionizedfluxesgeneratedbyaHiPIMSdischarge.Wehavefoundthatthefilmcolumnsarepositionedclosertothesubstratenormalastheionizationdegreeoftheincidentvaporincreases(Fig.3).Thiscorrelationbetweencolumntiltinganddegreeofioniza-tionis,however,validonlyatcertainkineticconditionsduringgrowth(CubutnotCrfilmsatroomtemperature),indicatingthatthefilmmorphologyduringthenucleationstagealsoaffectstheresultingcolumntilt(Fig.3).Aphenomenologicalmodelthatexplains,qualitatively,thecolumntiltaccountingforatomicshadowingatdifferentnucleationcharacteristicshasbeensug-gested. Reference:V.Elofssonetal.,“Tiltofthecolumnarmicrostruc-tureinoff-normallydepositedthinfilmsusinghighlyionizedvaporfluxes”,submittedforpublication.
Fig. 3. Column tilt angle with respect to the substrate surface normal as a fun-ction of the peak target current density (or equivalently the degree of ioniza-tion of the sputtered material) for Cu and Cr films grown at constant average power and Cu films grown at constant deposition rate (set 2). The lines are drawn as a guide to the eye.
Synthesis of carbon-based thin films using HiPIMSWecontinuedtoexplorethepotentialofHiPIMSforthesyn-thesisofcarbonbasedthinfilmsintheyear2012.WedevelopedaHiPIMSbasedprocessforthesynthesisofhydrogenatedamorphouscarbon(a-C:H)thinfilms.TheprocessisbasedonthehybridarrangementofHiPIMSandDCMS,whereasthefilmsynthesisisperformedusingahydrocarbonprecursorgas(acetylene)mixedwithargon.Wehavefoundthatthea-C:HthinfilmswithlowHcontent(about10%)canbegrownataboutten-foldhigherdepositionrateascomparedtothosedepositedinpureargonambientusinganacetylenefractionof5%inthegasmixture.Thefilms,alongwithlowHcontent,exhibithighhard-ness(morethan25GPa)whilethemassdensitiesofthefilmsintheorderof2.32g/cm3areobtained(Fig.4). Reference:A.Aijazetal.,“High-ratedepositionofhydrogen-atedamorphouscarbonthinfilmsusinghighpowerimpulsemagnetronsputtering”,inpreparation.
ma
te
ria
l p
hy
sic
s
58 IFM actIvIty report 2012
Fig. 4. Hardness, mass density and the H content of the a-C: H thin films grown using 5% acetylene in the gas mixture and the equal fractions of HiPIMS and DCMS powers. The total average power used was 50 W while the total pressure of 2 Pa was used.
HIpIMs – reactIve spUtterIngDischarge current behavior in reactive HiPIMSInamorerecentwork,weinvestigatedthebehaviorofthedischargecurrentinreactiveHiPIMSprocessesofmetal-oxides(Ti-OandAl-O).Theinvestigationswerecarriedoutbymeasur-ingtheioniccontributionsofthesputteringandreactivegasions(Ar1+andO1+respectively),sputteredmetalions(Ti1+andAl1+)aswellasmaterial-dependentproperties(second-aryelectronemissionyieldandpartialsputteringyield),tothedischargecurrent.Theionizedfluxoftheplasmaspecies,Ar1+,O1+,Ti1+andAl1+wasobtainedbymeasuringthetime-averagedandtime-resolvedionenergydistributionfunctionsusingionmassspectrometrywhilethesecondaryelectronemissionandpartialsputteringyieldswereobtainedbyperformingTRIDYNsimulations. Itwasfoundthattheobservedincreaseinthedischargecur-rentintheoxidemodeisduetothesubstantialcontributionofO1+ionstothedischargecurrentwhilethesourceoftheseO1+ionsisthesputteringtargetratherthanthegasphase. Reference:M.Aiempanakitetal.,“Understandingthedis-chargecurrentbehaviorinreactivehighpowerimpulsemagne-tronsputteringofoxides”,submittedforpublication.
Fig. 5. Typical discharge current waveforms in the metal (Ar) and oxide mode of HiPIMS (Ar+O2) for (a) Ti and (b) Al sputtering targets. There is a striking difference in both the rise time and the peak current value between the two modes. The pulsing frequency was constant (50 Hz), the pulse length was 300 μs, and the target diameter was 100 mm. The average discharge power was varied between 100 and 400 W.
syntHesIs oF wear-resIstant, antI-reFlectIve coatIngs UsIng HIpIMsWehaveusedHiPIMStosynthesizeAl-Si-Owear-resistantantireflectivecoatings.Broadbandanti-reflectivemultilayercoatingsrequiretheuseofalow-indexmaterialatthetopposition.NormallySiO2isusedwhichexhibitssufficientlylowrefractiveindex(~1.5at550nm)yetitslowhardness(~10GPa)hindersitsapplicationinabrasiveenvironments.Astrategytocircumnavigatetheselimitationsisthesynthesisofmulticom-ponentmaterialsthatcombinegoodmechanicalandopticalperformance.WesynthesizeAl-Si-OfilmsseekingtocombinethelowrefractiveindexofSiO2andtherelativelyhighhardnessofAl2O3.HiPIMSisusedtoenhancefilmproperties,suchasdensityandhardness.TheworkisperformedintheframeworkoftheEUprojectNoScratch(Grantagreementno286697)inwhichourgroupisoneoftheRTDperformers.
awards 2012• AsimAijazreceivedthefirstYoungScholarAwardattheInternationalConferenceonDiamondandRelatedMaterials(ICDCM)2012,Granada,Spainforhisresearchonthesynthe-sisofamorphouscarbonthinfilmsusingHiPIMS.
InvIted lectUres gIven dUrIng 2012• U.Helmersson,The use of highly ionized pulsed plasmas for
the synthesis of advanced thin films and nanoparticles,68thIUVSTAworkshop,“MultifunctionalSurfaceEngineeringforAdvancedEnergyApplications”,December9-13,2012.CityUniversityofHongKong.
• U.Helmersson,Opportunities using HiPIMS,The13thInterna-tionalConferenceonPlasmaSurfaceEngineering,Sept.10-14,Garmisch-Partenkirchen,Germany,Tutorialpresentation
spIn-oFF coMpanIes generated FroM tHe groUp:• TiÅAB,2012• IonauticsAB,2010• PlasmAdvanceAB,2007
acadeMIc and IndUstrIal collaboratIon partners (oUtsIde tHe departMent) In on-goIng proJects or JoInt pUblIca-tIons In 2012:• Prof.J.T.Gudmundssonandco-workers,ScienceInstitute,UniversityofIceland.
• Drs.T.KubartT.Nybergandprof.S.Berg,UppsalaUniversity.• Prof.H.Kerstenandco-workers,KielUniversity,Germany.• Prof.M.A.Raadu,KTH,Stockholm.• Profs.J.E.GreeneandI.Petrov,UniversityofIllionois,USA.• Dr.H.Ljungcrantz,ImpactCoatingsAB,Sweden.• Prof.UlfJansson,UppsalaUniversity,Sweden.• Dr.E.Lewin,EMPA,Zürich,Switzerland.• Prof.T.Mineaandco-workers,UniversitéParis-Sud,France.• Prof.J.M.Schneider,andco-workers,MaterialsChemistry,RWTHAchenUniversity,Germany.
• Dr.S.Kassavetis,AristotleUniversityofThessaloniki,Greece.• Prof.G.Abadias,DépartementPhysiqueetMécaniquedesMatériauxCNRS-UniversitédePoitiers-ENSMA,France.
• ThegroupisalsoinvolvedinindustrialcollaborationwithcompaniesinSweden,Finland,FranceandJapan.
ma
te
ria
l p
hy
sic
s
IFM actIvIty report 2012 59
semiconductor MaterialsstaffProfessors:ErikJanzén,PerOlofHoltz,LeifJohansson,PederBergman,AnneHenry,NguyenTienSon,RozitsaYakimova(emerita),BoMonemar(emeritus).Associate professors (docents):VanyaDarakchieva,UrbanForsberg,CarlHemmingsson,IvanIvanov,AneliaKakanakova-Georgiev,FredrikKarlsson,OlleKordina,PlamenPaskov,HenrikPedersen,MikaelSyväjärvi,QamarulWahab,ChariyaVirojanadara.Assistant professors: Jawadul-Hassan,GholamrezaYazdi.Post docs: PhilipHens,VolodymyrKhranovskyy,JianwuSun,SomsakulWatcharinyanon..Visiting scientists:HeungTaekBae,JapieEngelbrecht,Lin-ChinHung,KotaroKawahara,IckchanKim,KazushiroNomura,ShakilaBintReyaz,NebihaBenSedrine,ZhouShuai,EinarSveinbjörnsson,RieTogashi,QingXiangZhao.PhD students: SupaluckAmloy,ChamseddineBouhafs,IanBooker,Jr-TaiChen,MihailsCubarovs,DanielDufåker,MartinEriksson,SadiaMunizaFaraz,AndreasGällström,Chih-WeiHsu,TomasJemson,ValdasJokubavicius,XunLi,LouiseLilja,AndersLundskog,BjörnLundqvist,BjörnMagnusson,DanielNilsson,SusannaStammbach,PontusStenberg,PitsiriSukhaew,XuanThangTrinh,ThienDucTran.,RemigijusVasiliauskas,ChaoXia,MengyaoXie,MilanYazdanfar.Others: AnnopEktarawong,TihomirIakimov,RickardLiljedahl.Administrative/Technical staff: EvaWibom,SvenAndersson,RogerCarmesten.
2. sUMMary oF actIvItIesTheresearchactivitiesintheSemiconductorMaterialsDivisioncoverabroadspectrum,dominatedbybasicresearch.Thepro-jectsaremainlyfundedbyexternalagencies,partlywithdirectindustrycollaboration.Thereisastronginternationalcoopera-tionwithinmostresearchprojects.Thepresentresearchpro-gramcanbedividedintothefollowingpartlyoverlappingareas:• Preparationandcharacterizationofepitaxialfilmsandbulk
materialofsemiconductorswithchemicalvapordeposition(CVD),andsublimationtechniques,withastrongemphasisonSiCandIII-nitrides.Thecharacterizationincludessurfaceandinterfaceproperties,structuralproperties,opticalproper-tiesandtransportproperties.
• Investigationofpropertiesofdopantsanddefectsinalargevarietyofsemiconductors,includingstructuralaswellaselec-tronicproperties.Thelattercoversbulk,surfaceandinterfacedefects,withseveraltechniquesincludinglaserspectroscopyandmagneticresonance.
• Preparationandinvestigationoftheelectronicpropertiesofsemiconductorquantumstructuresandnanostructuressuchasheterostructures,quantumwells,quantumwiresanddots,andsuperlattices,withvariousspectroscopictechniquesinseveralmaterialsystems.
• StudiesoftheelectronicstructureofIII-nitridematerialsincludingdefectsanddoping.
• FabricationandcharacterizationofgrapheneonSiC.• DevelopmentofGaNandAlGaN/GaNHEMTstructuresfor
high-frequencypowerdevicesandAl-richAlGaNheterostruc-turesforlaserdiodes(LDs)andlightemittingdiodes(LEDs)intheUV(<400nm)anddeepUV(DUV,<300nm)spectraregions.
• GrowthandcharacterizationisotopeenrichedSiClayersforimprovedspectroscopy,enhancedthermalconductivity,andforquantumcomputingstudies.
Researchactivitiesinthisdivisionduring2012haveproduced73paperspublishedinhighqualityinternationaljournals,26conferenceproceedingspaperswithpeerreviewand3reviewarticles/bookchapters.Duringtheyear,15invitedtalksweregivenbythestaffatinternationalconferencesorsymposia.Theresearchersofthedivisionarewellcitedininternationaljour-nals,theSCIcitationsofpaperscitedfortheresearchersinthedivisioncovermorethan22000ISIcitations.Thehighlightsoftheresearchworkarepresentedatourwebsite: http://www2.ifm.liu.se/semicond/.Anupdatedlistofpublications2012canbesearchedinLinköpingUniversity(LiU)database:http://liu.diva-portal.org/smash/searchlist.jsf?searchtype=postgraduate&organisation=semiconductor materials&from=2012&until=2013 Theturnoverforresearchinourdivisionwasabout57.9MSEKduringtheperiod120101-121231,excludingequipmentgrants.Themajorpartofthisbudgetcomesfromexternalsources.Thefacultysupportforresearchwasabout8MSEKfortheyear.ExternalgrantsoriginatemainlyfromtheSwedishResearchCouncil(VR),theKnutandAliceWallenbergFounda-tion(KAW),theSwedishStrategicResearchFoundation(SSF),SwedishEnergyAgency,EuropeanDefenceAgency(EDA/FMV)andEU.Inadditionthereisastrongsupportfromandanintimatecooperationwithseveralindustries,mainlyLGInnotek,NorstelABandAixtronAB,andwiththeDefenseResearchInstituteFOI. TheDivisionwasduring2012engagedinseveralEuropeanresearchprojectsandNordicproject: Manga and EuSiC aretwolarge-scalejointmultinationalinitiativesofleadingsystemhousesandresearchlaboratoriesinEuropeaimingatthedevelopmentofindependentandstate-of-the-artcapabilityinGaNHEMTtechnology.ThegoalofEuSiCistodevelophighqualityEuropeanGaN-WaferonSiCsubstratesforspaceapplicationsandtocreateanindependentEuropeansupplychainforspacetechnology. NORLED–TheN-InnerprojectwithpartnersfromSweden,Denmark,GermanyandNorwayexploresfluorescentsiliconcar-bideforlightemittingproperties.ApaperthatdescribesthenewresearchwasincludedinthePhysicaScriptaHighlightsof2012.Thiscollectioncelebratesthemostinfluentialresearchpublishedinthejournalfromthelast12months. LG-Innotek–Theproject,whichissponsoredbyLGInnotekandtheStateofSouthKorea,strivestodevelopuniformepitaxiallayersforpowerdevicematerialon4”wafersusingthechlorinat-edepitaxialprocessthathasbeenstudiedhereforseveralyears.Thefirstphase(threeyears)oftheprojecthasbeenconcludedandthenextphaseisabouttocommence.Duringthecomingphasethefocuswillbeonreducingthedensityofstructuraldefectsthatareharmfultothedeviceperformanceandincreaseandcontrolthecarrierlifetimeofthematerialwhichisanes-sentialpartinthefabricationofbipolardevices. AmajorpartoftheKAWprojectisdevotedtoisotopeenrichedSiCmainlyforimprovedthermalconductivity.IsotopeenrichedSiClayersmanifestanumberofinterestingpropertiesusefulforscientificandindustrialapplications.Amongthemisaverynar-rowlinewidthinopticalcharacterizationwhichenablesdetailedmeasurementsofdefectcenters.Anotherinterestingphenome-nonoftheenrichedlayersisthattheyexhibitsignificantlyhigherthermalconductivityduetoareducedisotopescatteringprocessinthematerial.Weproducedanumberofisotopeenrichedepitaxiallayerswhichweusedtomeasurethermalconductiv-ityon.Themeasurementstoldusthatweindeedcouldseeasubstantialimprovementinthermalconductivityyetwehavenot
ma
te
ria
l p
hy
sic
s
60 IFM actIvIty report 2012
yetbeenabletofirmlyestablishthemagnitudeoftheincreaseascomparedtonaturalSiC.Inlightofthefavorableoutcomeoftheseexperimentswemanagedtosecurealargeramountofenrichedprecursorgastocontinueourexperiments.Anewreac-torwhichisspeciallydesignedtoreducecontaminationfromforeignisotopesisbeingconstructed. The SSF project SiC –theMaterialforEnergy-SavingPowerElectronicsstartedin2012andisfocussedondetermining,understandingandimprovingmaterialrelatedissuesinSiCepitaxyandgatedielectrics,whichtodayarethelimitingfactorsfortheSiCpowerdevicetechnology.Theprojectincludes:(i)UnderstandingandcontrolofcarrierlifetimelimitingdefectsinSiCmaterialanddevices,(ii)Characterisationandidentifica-tionofdevice-criticalepitaxialdefects,(iii)Investigationnovelalternativegatedielectricsandnovelfabricationtechniques,(iv)Developon-axisand/orlow-offangleepitaxyforpowerdeviceap-plicationsand(v)DevelopCl-basedepitaxyforhighgrowthrates. ThreePhDstudents(RemigijusVasiliauskas,AndersLund-skog,MengyaoXie)andfourdiplomaworksgraduatedin2012.TheDivisionisveryactiveinteachingandhastheresponsibilityforabout20undergraduateandgraduatecoursesatIFM.
3. HIgHlIgHtsChloride-based CVD growth of Silicon Carbide for Electronic ApplicationsAreviewpaperonchloride-basedSiCCVDwaspublishedinthehighlyrenownedjournalChemicalReviews,highestrankedjour-nalinthefieldofmultidisciplinarychemistry(the2011impactfactoris40.197).Thisisthefirstreviewofthefieldofchloride-basedCVDforSiC.[H.Pedersenetal.,ChemicalReviews112,2434(2012)].
Low temperature CVD of boron-carbon films for neutron detectorsToenableCVDfortheproductionofthenovelneutrondetectorsbasedontheisotope10BsuggestedbytheEuropeanSpallationSource(ESS),novellowtemperatureCVDroutesareneeded.Theneutrondetectorswillbebasedonaluminum,settinganup-pertemperaturelimitof600°CandpreventingtheuseofBCl3asboronprecursor.Wehavedemonstratedthesynthesisofthin,amorphous,boron-carbonfilms,withdensityandstochiometryclosetoB4C,at≤600°CbythermallyactivatedCVDusingtheorganoboranetriethylboron,B(C2H5)3,(TEB)assingleprecur-sor.[H.Pedersenetal.,Chem.Vap.Deposition18,221(2012)]
Fig. 1. Cross-sectional SEM image of a BxC film deposited on a silicon sub-strate at 600 °C in an argon atmosphere.
A novel high-power pulse PECVD methodAnovelplasmaenhancedCVD(PECVD)techniquehasbeendevelopedinordertocombineenergeticparticlebombard-mentandhighplasmadensitiesfoundinionizedPVDwiththeadvantagesfromPECVDsuchasahighdepositionrateandthecapabilitytocoatcomplexandporoussurfaces.Ionizedplasmaisgeneratedabovethesubstratebymeansofahollowcathodedischargesustainedindirectcurrent(DC)mode,orinhigh-powerpulsed(HiPP)modeusingshortpulsesofafewtensofmicrosecond.[H.Pedersenetal.,Surf.Coat.Technol.206,4562(2012)]Growth of semiconductor quality 3C-SiCCubicSiCwasgrownbyasublimationmethod.Bulklikemate-rialdemonstratedthatthe3C-SiCcanreachsimilarqualitylikecommercialhexagonalSiC.Asanultimatedeviceproperty,ina760µmthickmaterialthemeasuredcarrierlifetimeis8.2µs,whichiscomparablewiththebestcarrierlifetimein4H-SiClay-ers.[J.W.Sunetal.,Appl.Phys.Lett.100,252101(2012)].
Shockley-Frank stacking faults in 6H-SiCShockley-Frankstackingfaults(SFs)identifiedin6H-SiCbyacombinationoflowtemperaturephotoluminescenceandhighresolutiontransmissionelectronmicroscopy.Inthefaultedarea,stackingfaultsmanifestedaslargephotoluminescenceemis-sionsbandslocatedinbetweenthe6H-SiCsignal(at~2.99eV)andthe3C-SiCbulk-likeone(at~2.39eV).Eachofthestackingfaultrelatedemissionbandhadafour-foldstructurecomingfromtheTA,LA,TOandLOphononmodesof3C-SiC[J.W.Sunetal.,J.Appl.Phys.111,113527(2012)].
Negative-U System of Carbon Vacancy in 4H-SiC.Usingelectronparamagneticresonance(EPR),energylevelsofthecarbonvacancy(VC)in4H-SiCanditsnegative-Upropertieshavebeendetermined.CombiningEPRanddeep-leveltransientspectroscopy,thetwomostcommondefectsinas-grown4H-SiC–theZ1/2lifetime-limitingdefectandtheEH7deepdefect–havebeenidentifiedtoberelatedtothedoubleacceptor(2-|0)andsingledonor(0|+)levelsofVC,respectively.[N.T.Sonetal.,Phys.Rev.Lett.109,187603(2012)].
The influence of substrate morphology on thickness uniformity and unintentional doping of epitaxial graphene on SiCAmajorpartoftheresearchrelatedtographeneonSiCpre-paredbyhightemperaturesublimationhasbeenfocusedonunderstandingtheeffectofthegraphenesurfacemorphologyonitsproperties.Monolayerandbilayergraphenehasbeeninvestigated.Effectofenvironmentconditionshasbeenstudiedaswell.[J.Erikssonetal.,Appl.Phys.Lett.100,241607(2012);F.Giannazzoetal.,Phys.Rev.B86,234422(2012)]
Nucleation control of cubic silicon carbide on 6H-substratesIthasbeendemonstratedthatwhenusing6H-SiCsubstrates3C-SiCnuclatesonahomoepitaxiallayergrownpriortothecubicmaterial.Onesnucleated3Cgrowthratebecomeshigherthanthatofthe6H-SiC.Supersaturationhasbeencalculatedviathermalsimulationinthegrowthcellandshownthatthesupersaturationnonuniformitiesresultedin6H-SiCinclusions.Thesefindingswereusedtoproposepropergrowthconditionsofhighqualitybulk-likecubicSiC.Anotherprojectwastodevel-opnewsubstratesforoptimizedepitaxialgraphene–cubicSiC[R.Vasiliauskasetal.,Cryst.GrowthandDesign12,197(2012)].
ma
te
ria
l p
hy
sic
s
IFM actIvIty report 2012 61
Detailed studies of Si intercalation/de-intercalation of graphene on 6H-SiC(0001) Theintercalationandde-intercalationmechanismsofSidepos-itedonmonolayergraphenegrownonSiC(0001)substratesandaftersubsequentannealingstepswereinvestigated.AfterSidepositiononsampleskeptatroomtemperature,smallSidropletswereobservedonthesurface,butnointercalationcanbedetected.Intercalationwasrevealedtooccuratanelevatedtemperatureofabout800°C.TheSiwasfoundtomigratetotheinterfaceregionviadefectsanddomainboundaries.Thisobservationmayprovideananswertotheproblemofcontrollinghomogeneousbi-/multilayergraphenegrowthonnearlyperfectmonolayergraphenesamplespreparedonSiC(0001).[C.Xiaetal.,Phys.Rev.B.85,045418(2012)].
Fig. 3. LEEM images collected (a) after Si deposition at RT, (b) after 950 C annealing and (c) after deposited more Si at elevated temperature. The area marked by red “A” circle show a change of intercalation after annealing via migration at the defect area (green “C”). The area marked by blue “B” circle show no change with after deposition and annealing.
Changes in structural and electronic properties of graphene grown on 6H-SiC(0001) induced by Na deposition TheeffectsofNadepositedonmonolayergrapheneonSiC(001)wereinvestigated.TheexperimentalresultsshowthatNapreferstoadsorbonthegraphenelayerafterdepositionatroomtem-perature.AfullyNaintercalationatthegraphene-SiCinterfacewasobtainedafterheatingatabout75ºC.Interestingly,thetwobandsshowdifferentlocationsoftheDiracpointafterheatingandbothexhibitlineardispersioninthevicinityofthepointandnotthehyperbolicdispersionobservedforABstackedbi-layergraphene.[S.Watcharinyanonetal.,J.Appl.Phys.111,083711(2012)].
Fig. 2. π-band dispersion around the k-point recorded from a) monolayer graphene, b) after Na deposition and c) after heating at 75 C.
Formation of nitride based pyramidal dotsInGaNquantumdotshavebeenfabricatedontopofhexagonalGaNpyramidsbyselectiveareagrowthusinghot-wallmetalorganicchemicalvapordeposition.TounderstandthegrowthmechanismoftheseInGaNQDs,correlatedscanningtransmis-sionmicroscopy(STEM)andmicro-photo-luminescence(µPL)measurementswereperformed.ItisfoundthattheInGaNQDsgivingrisetosharpandwelldefinedemissionpeaksinµPL
spectrumisaconsequenceofaStranski-KrastanovtransitiononatruncatedarealocatedattheapexofthehexagonalGaNpyramid(Fig.4).[A.Lundskogetal.,Nanotechnology23,305708(2012)].
Fig. 4. Sketch of a) curvature and b) SK-dependent growth mechanism of the QDs together with TEM images.
On the polarized emission from exciton complexes in GaN quantum dotsTheopticallinearpolarizationpropertiesofexcitoncomplexesinasymmetricStranski-KrastanovgrownGaNquantumdotshavebeeninvestigatedexperimentallyandtheoretically.Itwasdem-onstratedthatthepolarizationangleandthepolarizationdegreecanbeconvenientlyemployedtoassociatecertainemissionlinesintherecordedphotoluminescencespectratoaspecificdot(Fig.5).Thetheoryfurtherpredictsthatthepolarizationdegreecanprovideinformationaboutthechargestateofthedot.[S.Amloyetal.,Appl.Phys.Lett.100,021901(2012)].
Fig. 5. (a) Polarization resolved μPL spectra of GaN QDs recorded for different angles of the linear polarization analyzer. (b,c) Polar plots of the integrated peak intensities of the emission lines XX, X, A and B as a function of the po-larization angle along with curve fittings. X and XX originates from the same QD, while both A and B originate from different QDs.
CVD growth of sp2-hybridized rhombohedral boron nitride. (M.Chubarov,H.Pedersen,H.Högberg,A.Henry).Theepitaxialgrowthofsp2-hybridizedrhombohedralboronnitride(r-BN)usingchemicalvapourdepositionhasbeeninvestigatedusingammoniaandtriethylboronasprecursorsandsapphireassubstrate.Hydrogengasisnecessaryfortheformationofr-BN,whereasitsformationisconsiderablydampedwhenus-ingargonasthecarriergas.ThepresenceofSiatomsintheprocessimprovesthecrystallinequalityofthegrowingfilmandcontributestothegrowthofhighqualityepitaxialr-BNinsteadoflessorderedt-BNfilm.Theincorporationefficiencyisfoundratherlowwithanaccumulationonthesurface.[Cryst.Growth&Design12,3215(2012)andCryst.Eng.Comm.DOI:10.1039/c2ce26423d].
ma
te
ria
l p
hy
sic
s
62 IFM actIvIty report 2012
Elastic constants, composition, and piezolectric polarization in InxAl1−xNWehavereportedforthefirsttimeadetailedstudyonthelatticeparametersandstiffnessconstantsofInxAl1−xNanddiscussindetailtheirdeviationsfromVegard’srule,andeffectsonthedeterminationofthealloy.WealsoreportedforthefirsttimethepiezoelectricpolarizationbehaviorforInxAl1−xNwitharbitrarysurfaceorientationspseudomorphycallygrownonGaNanddis-cusstheimplicationsofthedeviationsfromVegard’sruleinthelatticeparametersandstiffnessconstants.Thedetaileddiscus-sionsprovideguidancetoexperimentalistsontheappropriateapproachestoestimatecompositionandpiezoelectricpolariza-tionforInxAl1−xNwithdifferentcompositions,surfaceorientationsanddegreesofstrain.[M.-Y.Xieetal.,Phys.Rev.B86,155310(2012)].
Fig. 6. Piezoelectric polarization PPZ in InxAl1-xN grown pseudomorphically on GaN as a function of the inclination angle between the growth plane and the c-plane, θ, for different compositions, x.
AlN and AlN alloysWeaddressAlNmaterialgrowthanddopingissuesbyexplor-ingtechnologicallyandscientificallymotivatedapproaches:(i)implementationofahigh-temperatureMOCVDprocess[A.Kakanakova-Georgievetal.,“ApproachestoyieldbenefitsintheperformanceofemergingAlNsemiconductor”presentedattheXIBrasilianMRS,23-27Sept2012];(ii)interplaybetweengrowthkineticsandthermodynamicstoaltertheconditionsforpointdefectsincorporation[“ShallowdonorandDXbehaviorsofSiinSi-dopedAlxGa1-xN(x>0.70)”,papernominatedforIWN2012BestPaperAward,InternationalWorkshoponNitrideSemicon-ductors2012,Sapporo,Japan];and(iii)AlNscalability[E.F.deAlmeidaJunioretal.,“Defectsinhexagonal-AlNsheetsbyfirst-principlescalculations”,[Eur.Phys.J.B85,48(2012)]
Manga & EuSiC MangaandEuSiCaretwolarge-scalejointmultinationalinitia-tivesofleadingsystemhousesandresearchlaboratoriesinEuropeaimingatthedevelopmentofindependentandstate-of-the-artcapabilityinGaNHEMTtechnology.MangaprogramisacontinuationoftheKORRIGANprogramwithdedicationtobuildupaEuropeansupplychainofGaNHEMTtechnology.LiUsparticipationwithinMangaismaterialdevelopmentwithfocusoninterfacepropertiesbetweentheSiCsubstrateandthenitrideepilayerandtoimprovethethermaldissipation.ThegoalofEuSiCistodevelophighqualityEuropeanGaN-WaferonSiCsubstratesforspaceapplicationsandtocreateanindependentEuropeansupplychainforspacetechnology.LinköpingUniver-sitywillgrowHEMTstructureson3”wafers,whichthenwillbeprocessedattheEuropeanprocesshouse,UnitedMonolithicSemiconductor,UMSinGermany.
tHe ssF FUnded nano-n consortIUMNitride based quantum dots and wires for optoelectronic applicationsTheNANO-NconsortiumisfinancedwithintheNANO-Xpro-grambySSF.ThefocusforNANO-Nistowardsnanostructuresmadeofthewidebandgapsemiconductors:GaN/AlN/InNbasedquantumwiresanddots.
The organization of our NANO-N consortiumConsortium leader:Prof.PerOlofHoltzSenior researchers: Prof.ErikJanzén,Prof.JensBirch,andProfLarsOjamäeIndustry/institute mentors:JanAndersson,SusanSavage,TeresitaKvarnström,QinWang,Acreo,KistaandStevenSavage,FOI,LinköpingJunior researchers: FredrikKarlsson,MattiasKula,UrbanForsberg,MariaLundskog,Ching-LienHsiao,Reui-SanChen,Yen-TingChenPhD students:AndersLundskog,Chi-WeiHsu,SupaluckAmloy,JustinasPalisaitas,MuhammadJunaid,MartinEriksson
WithintheNANO-Nconsortium,financedbySSF,nitridebasedquantumdotsforoptoelectronicapplicationsareinvestigated.ThefocusistowardsfabricationandoptimizationofphotonemittingGaN/InGaNbasedquantumdotsstructures.WithintheNano-Nproject,thedevelopmentofdeterministicInGaNquantumdots(QDs)attheapicesofGaNpyramidshasbeenfocused.ForpracticalQDsdeviceapplications,theQDsmustbepositionedinacontrollablemannerinordertofacilitateefficientdeviceprocessing.MostInGaNquantumdotsreporteduptodate,consistofQDsrandomlydistributedacrossaplanarsamplearea.ThisisaconsequenceoftheStranski–Krastanov(SK)growthmethod,enablingself-assemblyoftheQDs.ThegrowthofInGaNQDsattheapexofahexagonalGaNpyramidisanelegantsitecontrolledapproach,whichwehavedevelopedinourhot-wallMOCVDreactor.Thereproducibilityandperfor-manceofthesesitecontrolledpyramidaldotshavenowattainedsuchamaturitythatwecanproceedwithmoredetailedinvesti-gationsoftheopticalandstructuralpropertiesoftheInGaNdots.
Nitride based pyramidal quantum dotsTheGaNpyramidswereproducedbygrowingGaNonphoto-lithographically-patternedsubstratesbymeansofselectiveareagrowth.Ontopofthesepyramids,athinInGaN/GaNquantumwellandaGaNcappinglayerweregrown.ThegrowthprocesswastunedtillthefilmshadstateoftheartqualitystructuralqualityandcomparablewiththebestInGaNmaterialspresentedintheliterature.AnInGaNQDisformedattheapexoftheGaNpyramidduetothepronounced(tensile)strainattheapex.Tun-ableQDemissionenergybyvaryingthegrowthtemperatureoftheInGaNlayersisalsodemonstrated.
Ternary nitride based nano rodsTernaryAl1-xInxNnanorodshavebeenproducedbyultra-high-vacuummagnetronsputterepitaxy(MSE)bycosputteringhigh-purityAlandIntargetsunderultra-high-purenitrogenatmos-phere.Thecrystalstructureofthenanorodsiswurtzitewithoutmixingzinc-blendephase.AlthoughtheAl1-xInxNnanorodshavehexagonalcross-sectionsingeometry,thenanorodshavephaseseparationandformscore-shellstructurewithhigherIncontentinthecore.Furthermore,self-assembledsuperlattices(SLs)intherodswereobserved.
ma
te
ria
l p
hy
sic
s
IFM actIvIty report 2012 63
Electron microscopy on nitride pyramidal quantum dots Thesuperiorspatialresolutionandanalyticalcapacityoftheelec-tronmicroscopehasbeenemployedtoanalyticallyinvestigatenitridequantumstructureswithaspatialresolutionbelow1nm.Currently,wehaveinvestigatedthepyramidalstructures,inpar-ticularthetruncatedareaofthepyramidonwhichiscrucialfortheformationofthequantumdots.BymeansoftheworldclasselectronmicroscopyinLinköping,theseunderstandingswillbeemployedtoinvestigateindetailthelocalization,segregationanddiffusionofquantumstructuresthroughouttheremainingperiod.
Optical characterization of nitride quantum dotsTheformationofindividualInGaNQDsgrownonGaNmicro-pyramidarraysisevidencedbyobservingsingle,sharp,excitonicemissionlinesofexcitonicoriginfromvariouspyramidsintheopticalcharacterizationbymeansofmicro-photoluminescence(µ-PL).Theseµ-PLspectrademonstratethatourprocessgivesabettercontrollabilityonthedimensionand/orthecompositionofthedotscomparedtoe.g.conventionalSKdots.
Fig. 7. µPL spectrum of a GaN pyramid with an InGaN quantum dot on the top of the pyramid.
Industrial Research Project with LG InnotekDuring2010,alargecollaborativeeffortbetweenSemiconduct-ingMaterialsandLGInnotekwasstarted.Theproject,whichissponsoredbyLGInnotekandtheStateofSouthKorea,strivestodevelopuniformepitaxiallayersforpowerdevicematerialon4”wafersusingthechlorinatedepitaxialprocessthathasbeenstud-iedhereforseveralyears.ForthispurposeLGInnotekplacedanewcommercialCVDreactoratLiUthatcaneffortlesslyhandle4”wafers.Thefullprojectisanticipatedtolastfor9yearssplitintothreestages.IntotaltheresearchfundingtotheSemicon-ductingMaterialsgroupisworth20MSEKnotcountingtheCVDreactor.ResearchersfromLGInnotekarehereatLiUtolearnthefundamentalsofCVDandtostudythechlorinatedchemistry
NORLED – Northern Light Emitting Diode Initiative (M Syväjärvi, R Yakimova).NORLED(www.ifm.liu.se/norled)isaprojectfundedbyNordicEnergyResearch.Itexploresanewresearchareaoflightemis-sionfromsiliconcarbide.ThelightpropertieshavethepotentialtoleadtoawhiteLEDforgenerallighting,asitisabletodeliverapurewhitelightorawarmwhiteLED.Besidesithasthead-vantagethatitdoesnotuseaphosphorandrareearthmetals.In2012,theresearchfindingsleadseveraldiscoveriesaboutoptimi-
zationroutesbybalanceofdonorsandacceptors,andinfluenceby3Cstackingfaultsinthematerial.Thenetworkproposedasymposiumon“AlternativeapproachesofSiCandrelatedwidebandgapmaterialsinlightemittingandsolarcellapplications”whichwasacceptedattheE-MRS2013SpringMeeting.Thecollaborationinitiatedapreviouslyunexploredresearchareaofcubicsiliconcarbideforahighlyefficientsolarcellbyimpurityphotovoltaics.
4. collaboratIons Wehaveactivecollaborationwithmorethan30researchgroupsandindustriesinEurope,USA,Asia,America,AustraliaandAfrica.
surface and semiconductor physicsstaffProfessors: GöranHansson,HeadofDepartmentRogerUhrberg,HeadofDivisionWei-XinNiPost-Docs: JacekOsieckiPh.D. students: HafizMuhammadSohailAdm/Techn. staff: KerstinVestin,adm.asst.,Karl-OlofBrolin,researcheng.,Chun-XiaDu,seniorresearcheng.,Ph.D.
actIvItIesTheresearchwithinthedivisionofSurfaceandSemiconductorPhysicsincludesthefollowingfields.Firstly,basicstudiesaremadeoftheelectronicandatomicstructureofsemiconduc-torsurfaces,eithercleanorwithwell-characterizedoverlayers.Foreignatomsonasurfacemayresultinalargevariationoforderedatomicstructures,i.e.,surfacereconstructions.Physicalpropertieslikemetallicorsemiconductingsurfaceconductancemaydependonwhatreconstructionisformed.Variousphysicalpropertiesarestudiedusingarangeofdifferenttechniques.Themostimportantoneisphotoelectronspectroscopyfromwhichonecanobtainacompletedeterminationofthesurfaceelec-tronicstructure.Thesestudiesareperformedatthesynchrotronradiationfacility,MAX-labinLund,Sweden.Anotherimportanttechniquethatweuseisscanningtunnelingmicroscopy(STM)thatprovidesinformationabouttheatomicstructureofthedif-ferentsurfaces.AvariabletemperatureSTM(Omicron)inourlabatIFMisthemajorinstrumentusedforthesestudies.Overtheperiodofseveralyearswehavealsobuiltupanexperienceintheoreticalstudiesofvarioussystems.Wefindthecapabilitytodobothexperimentalandtheoreticalstudiesquiteimportant.Itgivesustheadvantagethatwecanapproachaproblemfromboththeexperimentalandtheoreticalsidetoobtainacompletepictureoftheelectronicandatomicstructure. Withinthisfield,thedivisionwassupportedbytheSwedishResearchCouncil(VR)asRogerUhrberghasoneresearchgrantforstudiesoftheatomicandelectronicstructureofsemiconduc-torsurfaces. Secondly,therearestudies,developmentandapplicationofsilicon-basedmolecularbeamepitaxy(MBE),whichisacrystalgrowthtechniquetoproduceadvancedsemiconductorstructures
ma
te
ria
l p
hy
sic
s
64 IFM actIvIty report 2012
forfundamentalphysicsanddevicestudies.WehavealsobuiltupcompetenceandprocesscapabilityforthedevelopmentofsomedevicemoduleslikeSiGe-heterojunctionbipolartransis-tors(HBT)forapplicationsinoptoelectronicsandrftechnolo-gies. Withinthisfield,Wei-XinNihasrecentlygainedoneresearchgrantfromVRforstudiesofthesiliconepitaxyonsilicidetemplatesforapplicationsinextremelyhighfrequencyHBTtechnologies. WeareextensiveusersofthesynchrotronradiationfacilityMAX-labinLundandovertheyearswehavebuiltupexperimen-talequipmentattwodifferentbeamlines.Oneofus,Uhrberg,isworkingactivelywiththeangle-resolvedphotoelectronspec-troscopy(ARPES)beamline,whichisoneofthefirstseventobebuiltatMAXIV.Thebeamline,whichwillbelocatedatthe1.5GeVring,hasreceivedafundingof70.2MSEK.
Courses
Thedivisionhasduringtheyearbeenresponsibleforthefollow-ingundergraduatecoursesforstudentswithintheEngineeringProgramsandtheInternationalMastersProgramonMaterialScience:TFYA38Optoelectronics(Ni),TFYA25PhysicsofCon-densedMatter,partII(Uhrberg).ThePh.D.courseSolidStatePhysicsIwasgivenbyUhrberg.
HIgHlIgHts1)Thestructuralandelectronicpropertiesofthetwo-dimension-alSn/Ag/Ge(111)3x3surfacealloyhasbeenstudied.Thisisarareexampleofasystemthatformsawellordered,oneatomiclayerthick,alloy.Experimentaltechniqueslikelowenergyelectrondiffraction(LEED),scanningtunnelingmicros-copy(STM),andangleresolvedphotoelectronspectroscopy(ARPES)arecomplementary,andtheycombinedprovidebothelectronicandatomicstructureinformation.Figures1aand1bpresentfilledandemptystateSTMimagesofthesameareaofthe3x3structure,respectively.TheSTMimagesarerepresenta-tionsofthedensityofstateswithintheenergyrangesetbythetunnelingvoltage.TheparallelogramsdrawninFigs.1aand1boutlinetheunitcellthatisninetimesaslargeasthatofthesubstrate.Thefilledstateimageisdominatedbyoneprotru-sionwhiletheemptystateimageshowtwoprotrusionsperunitcell.EachprotrusioninthefilledstateimagescorrespondstoseveralSnand/orAgatoms.TheelectronicstructurethatgivesrisetotheSTMimagescanbestudiedindetailbyARPES.Fig.1cshowstheintriguingFermisurfaceconsistingofoverlappingtrianglesateveryK-pointandacomplexshapeatG.TheelectronicbandsthatdisperseacrosstheFermilevelhaveafreeelectronlikeshape,withahighelectronvelocity.Thesesteepbands,withalmostlineardispersion,areclearlyseeninFigs.1dand1e.
Fig. 1. a) and b) show filled and empty state STM images of the Sn/Ag/Ge(111)3x3 surface alloy, respectively. c) Fermi surface of the surface alloy. d) and e) Surface band dispersions along the symmetry direction in b). The Fermi surface is formed by the uppermost, steeply dispersing, bands.
2)FollowingtheearliersuccessinfabricatingRF-andphotonic-transistorsusingSi/SiGe-heterojunctionstructuresmadebymolecularbeamepitaxy(MBE)withimprovedperformance,thegroupcontinuesitseffortinmakingSi-basedepitaxiallayerstructuresforadvanceddeviceapplications.Agrowthtechniquehasbeenrecentlydeveloped,whichenablestheepitaxialgrowthofSilayersonsomesilicidetemplates.
Si-on-silicidesorviceversaarehighlyinterestedformanydeviceapplications,inparticular,SiGe-heterojunctionbipolartransis-tors(HBTs)tooperateatextremelyhighfrequencies,e.g.,withafmaxvaluebeyondthe0.5THzforecastoftheInternationalTechnologyRoadmapforSemiconductors(ITRS).OneobstaclethatblocksresearchwasoccurrenceoftheSi3Dgrowthduetoaresultofstronglocaldistortionandalargebond-energydifferencebetweenSiandmetalatoms,althoughthecrystallinestructuresaresimilarwithaverysmalllatticemismatchbetweenSiandsomesilicides,e.g.,CoSi2(a0=5.364Åcomparedtoa0=5.430ÅforSi)andNiSi2(a0=5.406Å). Inourapproach,thegrowthexperimentswerecarriedoutonthepatternedSisubstrate,suppliedbyUppsalaUniversity,with6-nmthickCo1-xNixSi2stripsof1-10µminwidth.Withanelabo-rateinsitusurfacecleaningprocessusingaSibeam,andthesubstratetemperaturemodulationduringgrowthtotradeoffthenucleationrateanddislocationpropagation,defect-freeSilayerswithathicknessbelow10nmhavebeensuccessfullygrownonCo1-xNixSi2strips.TheinterfacebetweenSiandsilicatewasveryflatandcoherent,asevidencedbyhigh-resolutiontransmissionelectronmicroscopy. Thegrouphasalsorecentlyinitiatedsomeresearchactivitiesaimingatdevelopingthetechniquesthatcanproduceanoxidelayeronsilicon-carbide(SiC)withimprovedinterfaceproper-tiesandahighdielectricstrength.ByinvestigatingthedetailedchemicalprocessesinvolvedduringtheoxidationofSiC,wepro-
ma
te
ria
l p
hy
sic
s
IFM actIvIty report 2012 65
posedanewmeanstopre-treatthecarbidesurface,followedbytheoxidationofaSi-basedlayeratlowtemperature.Theinitialresultsarepositive,andwewillcontinuetheactivities,inordertoachieveatechnologythatwouldbeusedformanufacturingSiC-MOSFETsforpowerelectronicapplications.
assIgnMents1.Scientificprogramcommitteeofthe8thInternationalConfer-enceonSiEpitaxyandHeterostructures(ICSi-8,Fukuoka,JapanonJune2-7,2013).Ni.2.Scientificprogramcommitteeofthe14thInternationalCon-ferenceontheFormationofSemiconductorInterfaces(ICFSI-14,Gyeongju,Korea,June30-July5,2013).Uhrberg.
appoIntMents1.Prof.Wei-XinNiiscurrentlyanappointedassociateeditorofIEEETransactionsonNanotechnology.
collaboratIonsThereisextensivecollaborationwithothergroupsatIFMforthecharacterizationofMBE-grownstructures,inparticularthedivisionsofSemiconductorMaterialsandThinFilmPhysics.Ex-ternalcollaborationhasbeendonewith,e.g.,groupsatJohannesKeplerUniversitaet(Prof.G.Bauer,Dr.T.Fromherz),Heriot-WattUniversity(Prof.C.Pidgeon),NationalNanoDeviceLabsinTaiwan(Drs.M.-N.ChangandJ.-M.Shieh),SichuanInstituteofSolidStateCircuits(Dr.K.-C.Li),TsinghuaUniversity(Dr.D.-G.LiU).InprojectsinvolvingsynchrotronradiationwecollaboratewithDr.K.Sakamoto,ChibaUniversity,Japan.
Master tHesIs worK:Yu-WeiChiu:NovelmethodofSiCoxidationfortheimprove-mentofinterfaceproperties,June2012.
thin Film physics
staffProfessors LarsHultman,Head of DivisionJensBirch,Deputy HeadEstebanBroitman,Guest Prof., Carnegie-MellonMichelBarsoum,Guest Prof., Drexel UniversityJosephE.Greene, Guest Prof., University of IllinoisAnneHenry(from 2013)IvanPetrov, Guest Prof., University of Illinois
Associate Professors / LecturersJohannaRosén, Senior Lecturer, Docent, Deputy HeadValeriuChirita,Senior Lecturer, DocentPerEklund, Senior Lecturer, DocentFredrikEriksson,Senior Lecturer, DocentGueorguiGueorguiev, Lecturer, DocentHansHögberg, Senior Lecturer, VR Researcher, DocentJensJensen, Senior Lecturer, DocentMartinMagnuson, Senior Lecturer, DocentPerPersson, Senior Lecturer, VR Researcher, DocentGaliaPozina, Senior Lecturer, Docent
Assistant Professors / ResearchersBjörnAlling,Docent GrzegorzGreczynskiChing-LienHsiaoCarinaHöglund, ESS ABJunLuLars-ÅkeNäslundPerSandström
Post DocsYenTingJamesChen, Natl Tsing Hua Univ TaiwanAxelFlink, Impact Coatings ABAndrejFurlan, Uppsala University and Linköping Univ.MagnusGarbrecht, CAU Kiel and Technion IsraelÁrniSigurdurIngason, University of IcelandPetruLuncaPopa, Univ. Strasbourg, now U. Paris-SudBiplabPaul, IIT, KharagpurGyörgyZoltánRadnoczi, MFA, Hungarian Acad. Sci.JeremyLeroySchroeder, Purdue University MarkTucker, University of SydneyIgorZhirkov, Tomsk State University
PhD Students KonstantinosBakoglidisMikhailChubarov (from 2013)MartinDahlqvist, LicentiateDanielEdströmAnnopEktarawong (from 2013)DavidEngbergAndersEriksson, LicentiateHannaFager, LicentiateAmieFallqvistMathiasForsbergCeciliaGoyenolaJosephHalim, also at Drexel University, USAMewludeImamLarsJohnson, PhD 2012, now at Sandvik AB LindaKarlssonSitKerdsongpanya, LicentiateAliKhatibi,LicentiateSergeyKhromov,LicentiateHannaKindlundChung-ChuanLaiLudvigLandälv(from2013),Ind.PhDStu-dent,SandvikAurelijaMockute,LicentiateJunaidMuhammad,LicentiateMarleneMühlbacher(from2013)alsoLeobenUniv.SimonOlsson,LicentiateJustinasPalisaitis,LicentiateAndrejsPetruhinsDavideSangiovanni,LicentiateSusannSchmidt,LicentiateSteffenSønderby,Licentiate,Ind.PhDStu-dent,DTI
ma
te
ria
l p
hy
sic
s
66 IFM actIvIty report 2012
LinaTengdeliusOlofTengstrand,LicentiateChristopherTholanderAndreasThoreAgneZukauskaite,LicentiateAdministrative and Technical StaffKirstinKahl, Division Coordinator, AFM CoordinatorCamillaKarlsson, Division Coordinator, Linné Coord.IngerEriksson, Division Coordinator, retired 2012 ThereseDannetun, FunMat Vinnex Center CoordinatorSvenAndersson, 1st Research Engineer Karl-OlofBrolin, Research Engineer, retired 2012ThomasLingefelt, 1st Research EngineerHarriSavimäki, Research Engineer
aIMs and vIsIonWeconductapplication-inspiredbasicresearchonthinfilmstofundamentallyunderstandtheatomisticnatureofmaterialspropertiesandbehaviorandlearnhowtomakematerialsper-formbetterthroughnewmethodsofsynthesisandprocessing.Emphasisisputontherelationshipsbetweengrowthfromthevaporphase,microstructureandpropertiesofadvancedfunc-tionalmaterials.Wethusextendthefrontiersofmaterialsandnanosciencestoexpandthescientificfoundationsforthedevel-opmentofmaterials.Ourresearchconcernsunsurpasseddesignofnewmulti-functionalmaterialsforengineering,electronics,andthelifesciences.Resultsareexploredincollaborationwithindustryandthepropertiesofstructuresuniquetothinfilmsformthebasisfornewandimprovedmaterialsandprocesses.Wefurtherseeknovelphasesandstructures,aswellasdiscover-ingmaterialsphenomena.
researcH prograMOurresearchconcernsthematerialsscienceandnanotechnol-ogyofthinfilms.Itisaimedatincreasingtheunderstandingofvaporphasedeposition,ion-surfaceinteractions,andreactionsinadvancedmaterials.Specifically,weprobeintothenatureofep-ilayers,texturedthinfilms,andnanoscalematerials.Modelsys-temsincludetransitionmetalnitrides,wide-bandgapnitrides,multifunctionalceramics(MAXphases;e.g.,Ti3SiC2,Ti2AlN),nanocomposites,superlattices,fullerene-likecompounds,lowdimensionalphases,cluster-assembledmaterials,andmultilay-ers.ThecoretechniquesoperatedanddevelopedbytheThinFilmPhysicsDivisionare:• MagnetronSputterEpitaxy• HIPIMS,inparticularhybridtechniques• CathodicArc,inclpulsedfiltered• ElectronMicroscopy:Cs-corrected,FIB,CL• X-rayDiffraction,incl.RSM• Nanotribology• AbinitioCalc.,inclSyntheticGrowthConcept• Moleculardynamicssimulations
Individual Excellence Grants- ERCAdvancedGrant(Hultman)- ERCStartingGrant(Rosén)- KAW-Scholar(Hultman)- KAWAcademyFellow(Rosén)- SSFIngvarCarlssonAward(Eklund)- VinnovaVinnmer:III-Nnanostructures(Pozina)- VRBreak-ThroughResearchGrant(Pozina)
Center-of-Excellence and Coordinated Grants- StrategicGrant(SFO)inMaterialsScience,AFM- SSFSynergyGrant,FunCase
- VRLinnaeusGrant,LiLi-NFM- VinnovaExcellenceCenter,FunMat- KAW-Project:IsotopicControlforUltimateMaterials (Janzén,Abrikosov,Birch,Hultman)- VR/RÅCFrameProgramMaterialsScience usingHigh-EnergyX-Rays(Birch)
Individual Research Project Grants- EU-FP7NMP:Life-LongJoints;SiNxCoat-ingsforImproved
ImplantFunction(Hultman,Högberg)- VRSpecialResearcherElectronMicrosc(Persson)- VRSpecialResearcher+BorideProject(Högberg)- VRMXenes-2DCeramics(Barsoum,Hultman)- VRSelforganizednanostructures(Hultman)- VRTernaryIII-nitridenanostructures(Hsiao)- VRDiffusioninCeramicFilms(Hultman)- VRDesignofNanolaminatedFilms(Rosén)- VRScN-basedfilmsforthermoelectrics(Eklund)- VRAtomicallyresolvedelectr.prop.(Persson)- VRDesignofNanostr.Materials(Gueorguiev)- VRTheoryofneutron-sensitivefilms(Alling)-EnergyAgency:On-axisepitaxialSiC(Henry)- NordforskPhDFuelCellElectrolytes(Eklund)- NordicInnovationCentre“Thin-SOFC”(Eklund)- EnergyAgency:DefectsphysicsinGaN(Pozina)- ÅPF:DevelopmentofhybridLEDs(Pozina)- CarlTrygger:Defectsinnanostr.GaN(Pozina)- CarlTrygger:IonBeamSynthesis(Jensen)- CarlTrygger:BNepitaxialCVDgrowth(Henry)- STINTCluster-assembledmaterials(Gueorguiev)
UndergradUate coUrses oFFered TFYA21 MaterialsScience(Hultman)TFYA50 CDIO–ComputationalPhysics(Chirita)TFYA53 ComputationalPhysics(Chirita)TFFM40AnalyticalMethodsinMtrlSci.(Eriksson)TFYA43 Nanotechnology(Birch)NFYA04 NanoScientificProject(Rosén)TFYA17 AdvancedProjectAppl.Phys.(Eklund)TFEI71 Electr.Measurem.Systems(Sandström)TFMT13 MeasurementTechnology(Sandström)TFMT16 ComputersinMeasurem.Syst.(Sandström)TSTE05 (IFM)Electr.&Meas.Tech.(Sandström)
gradUate coUrses oFFeredSynchrotronRadiation(Magnuson)IonBeamAnalysisofCondensedMatter(Jensen)FundamentalsofCeramics(Barsoum)NucleationandGrowth(Greene,Birch,andHultman)VacuumScienceandTechnology(Eklund)ElectronMicroscopy(Persson)X-rayDiffraction(BirchandEriksson)
pHd tHeses In 2012LarsJohnson, Inside The Miscibility Gap: Nanostructuring and Phase Transformations in Hard Nitride CoatingsMuhammadJunaid,Magnetron Sputter Epitaxy of GaN Epilayers and NanorodsJustinasPališaitis,Valence Electron Energy Loss Spectroscopy of III-Nitride Semiconductors
lIcentIate tHeses In 2012HannaFager,Growth and Characterization of Amorphous TiAlSiN and HfAlSiN Thin FilmsSitKerdsongpanya,Scandium Nitride Thin Films for ThermoelectricsSergeyKhromov,The Effect of Mg Doping on Optical and Struc-
ma
te
ria
l p
hy
sic
s
IFM actIvIty report 2012 67
tural Properties of GaNAurelijaMockutė,Thin Film Synthesis and Characterization of New MAX Phase AlloysSimonOlsson,Approximant Phases in Quasicrystalline AlCuFe Thin FilmsSusannSchmidt,Carbon based Thin Films Prepared by HiPIMS and DCMSSteffenSønderby, Physical Vapor Deposition of Yttria-Stabilized Zirco-nia and Gadolinia-Doped Ceria Thin Films for Fuel Cell ApplicationsOlofTengstrand,Me-Si-C (Me= Nb, Ti or Zr): Nanocomposite and Amorphous Thin FilmsAgnėŽukauskaitė,Metastable YAlN and ScAlN thin films: growth and characterization
dIploMa tHeses In 2012
PeterCarlsson,Combinatorial Thin Film Synthesis of Cr2AlC; a Comparison of 2 Sputtering MethodsKuoChieh-Yi,Fabrication and Optical Properties of ZnO Nanocrys-tal/GaN Quan-tum Well Based Hybrid Structures
specIal events In 2012• JohannaRosénappointedKAWFellow• PerEklundSeniorLecturer• VRBreak-ThroughGranttoGaliaPozina• DrGaliaPozinawinneroftheIVAEngineeringSciences
”Mentor4Research”Prize–acatalystsforCommercialization• LarsHultmanwinneroftheJuniorFacultyPrize2012atLiU
forsupportingthecareersofjuniorresearchers,thuscreatingasustainableresearchenvironment
• LarsHultmanEditor-of-ChiefandPerEklundEditorforRapidCommunicationsofVACUUM.
• Ching-LienHsiao,PerEklund,andJohannaRosénreceivedVRYoungRe-searcherGrants
• VRIndustryGraduateStudent(LudvigLandälv,Sandvik)GranttoHultman,AllingandEklund.
• 5-yearSSFSynergyGrant:FunctionalCarbidesandAdvancedSurfaceEngineeringFunCase.
scIentIFIc HIgHlIgHts In 2012• TheDivisionpublished72papersinACSNano,ActaMa-
terialia,AppliedPhysicsLetters,ChemicalPhysicsLetters,CrystalGrowthandDesign,Nanotechnology,PhysicalReviewB,andPhysicalReviewLetters,et.c.
• WecommissionedaKratosAxisUltraDLDXPSSystem(Porthos).Itisastate-of-the-artspectrometerequippedwithmonochromatizedAlKaandAgLaphotonsourcesandalow-energy,low-incidenceangleionsputtergunforhighresolu-tiondepthprofilingofthinfilms.Instrumentisequippedwiththeimaginganalyzerthatiscapableofproducingchemi-calstateimageswith<3mmspatialresolution.Anin-situheatingstage(1000°C)isavailable.
• TogetherwithresearchersofESSABwepresentedamethodtoproducethinfilmsof10B4C,withmaximizeddetectionef-ficiency,intendedtobepartofanewgenerationoflargeareaneutrondetectors.J. Appl. Phys. 111 (2012) 104908.
• Wefoundbyabinitiocalculationsandsyntheticgrowththatfullerene-likesulfocarbide(FL-CSx)isstructuredfor10-20at.%S.Bothquasi-planarnetworksandcage-likeconforma-tionsform,butbondrotationandcross-linkinghaveaminorrole.J. Phys. Chem 116 (2012) 21124
• Chromiumcarbidethinfilmswerefoundtoformamor-phousnanocompositeswithnon-crystallineCrCxinanamorphouscarbonmatrix.OursoftX-rayabsorption-emissionstudyperformedatMAX-IVLab.showsadditionalpeakstructuresexhibitingnon-octahedralcoordinationandbonding.J. Phys. Cond. Mat. 24 (2012) 225004.
• TheoriginoftheanisotropicSeebeckcoefficient(thermoelec-triceffect)innanolaminatedcrystalswastracedtoanisotro-piesinelement-specificelectronicstatesbyusingpolarizedangle-dependentX-rayspectroscopy.OurresultsexplainwhytheaverageSeebeckcoefficientofTi3SiC2inpolycrystalsisnegligibleoverawidetemperaturerange.Phys. Rev. B 85 (2012) 195134.
ma
te
ria
l p
hy
sic
s
68 IFM actIvIty report 2012
• Weemployedasimplex-optimizationproceduretopredictthatthehypotheticalNb2GeCMAXphaseisstable,afterwhichwediscoveredthisNb2GeCphaseintheoreticallyguidedthinfilmsynthesisusingmagnetronsputtering.Thisisthefirstnew211 MAXphasetobediscoveredsincethe1960s.Phys. Rev. Lett. 109 (2012) 035502.
• Thestructuralperfectionoffci-ZnMgYsingle-grainqua-sicrystalswasinvestigatedusingXRDandTEMintheLinköpingaberration-correctedTitan3.Reciprocalspacemappinganalysisrevealedalinearphasonstrain,whichisaquasi-crystallinespecificdefectrelatedtoatomicrearrange-mentsinthequasi-lattice.TEMrevealedanunusuallylargephononstrainofupto5%infilmAlCuFeSiquasicrystalapproximants.
• WeusedmetastableNaCl-structureTiAlNasamodelsystemtoprobetheeffectsofAlvs.Tiionirradiationduringfilmgrowthemployingahybridapproachcombininghigh-powerpulsedmagnetronsputtering(HIPIMS)withdcmagnetronsputtering.WeshowedthatAl+ionfluxfromHIPIMStargetresultsinhigh-AlNcontentfilmswithhighhardnessandlowresidualstress,unlikethegrowthassistedbyTi+/Ti2+ions.Surf.Coat.Technol.206(2012)4202
• WeusedVNasamodelsystemtodemonstrate,withexperi-mentandDFTcalculations,thatrefractoryVMoNalloysexhibitnotonlyenhancedhardness,butincreasedductility.ThehardnessofnewlysynthesizedV0.5Mo0.5Nis~25%abovethatofVN.WhilenanoindentedVNandTiNsam-plessufferfromseverecrackingtypicalofbrittleceram-ics,V0.5Mo0.5Nfilmsdonotcrack.Instead,theyexhibitmaterialpile-uparoundnanoindents,characteristicofplasticflowinductilematerials.Inaddition,thewearresistanceofV0.5Mo0.5NisconsiderablyhigherthanthatofVN.
• CuOnanomaterialshaveinterestingproperties,dependingontheirnanostructures.CollaborationwithPhysicalElec-
tronicsandNanotechnologygroupinNorrköping,WehaveusedHRTEMtogetherwithSAEDstudiedthe3Dcomplexnanostructureandfirsttimefoundouta3Dinterpenetratedarchitecturewith(101)twinstructureinβ-shapenanoCuO.Resultsarepublishedon-lineinMRLs.
• IncollaborationwithUppsalaUniv.andKTH,wehavein-vestigatedsolid-state-reactionstoformnanoelectronicnickelsilicides.UsingtheLinköpingdouble-correctedTitan3TEMwediscoveredanovelsilicidewithbccstructure,whichisametastableintermediatephaseandplayanimportantroleforreduced-temperatureformationofultrathinepitaxialNiSi2films.
• ThedistributionofanAelementstronglyinfluencesthepropertiesofMe1-xAxZy,ternarymaterials,whereMeisearlytransitionmetals,AisAlorSiandZisCorN.Weusedourdouble-correctedTitan3TEMcombinedwithenergydisper-siveX-rayanalysistostudytheSidistributioninmagnetronsputteredTiSiNyfilmsgrownonTiN-templatedMgO(001),(110),and(111).SisegregationtoformSiNz(z≈1)tissuephases,whichpromotesformationofepitaxialTiN-enrichednanocolumnswith{110}interfacesand{200}topfacets.
ma
te
ria
l p
hy
sic
s
IFM actIvIty report 2012 69
tecHnology transFer and InteractIons• GrantedPatent:MethodforProducingaNeutronDetectorComponent:CarinaHöglund(ESS),JensBirch,LarsHult-man
• Patentissued:US8,157,446B2”Cageforarollerbearing...”L.HultmanwithSKFAB
• Patentapplication:CoatingofSubstratesusingHIPIMS:LarsHultman,GrzegorzGreczynskiwithCemConAG.
• Patentapplication:GrapheneFETsensor,RuthPearce,MikeAndersson,RositzaYakimova,LarsHultman,AnitaLloydSpetz
•ABB Corporate Research /Impact Coatings / SPforapplicationsofMAXphases
•SECO Tools, Sandvik Coromant, Ion Bond, SKF, CemeCon:researchonwear-resistantfilmsandPVDprocesses
•N-works AB–aspin-offcompanystarted2012byJensBirchandLarsHultman
• PerEklundandSverigesungaakademi(SUA)publishedin
DN-Debatt.
scIentIFIc brancH oF
Theory and Modeling
Theprogram‘TheoryandModeling(T&M)’attheDepartmentofPhysics,ChemistryandBiology(IFM)includesTheoreticalPhysics,ComputationalPhysics,TheoreticalBiology,andBio-informatics.Thefieldoftheoryandmodelingispresentlyinaveryexpansivephase.Thereasonistheprofoundandrapiddevelopmentofcomputers,efficientalgorithms,software,andimmensedatabasesthatweexperiencetoday.Itoffersnewandrichopportunitiestosolveinrealisticwaysmanyimportantproblems.Moreovermostchallengingproblemsformod-ernscience,thediscoveryofnewandcleanenergysources,
understandingthestructureoftheEarth’score,understandingmechanismsofproteinfunction,solvingtheproteinfoldingproblem,andunderstandingtheecologicalconsequencesofglobalclimatechangerequiretrulyinterdisciplinaryefforts.Onlyafewyearsagothecomplexityassociatedwithshape,intricateboundaryconditions,differentlengthandtimescales,immenseamountofdata,etc.,simplymadeitprohibitivetotackleproblemsofthiskind.Todayweconsiderthemwithgreatsuccess. Thegeneralfieldoftheoryandmodelingisalsobecomingincreasinglyimportantbecauseitmaysupplementexpensiveand/ortimeconsumingexperimentsandproductdevelop-mentswithrealisticsimulationsbasedonmathematicalmodels,rapidaccesstolargedatabases,etc.Itmayalsoreplacehazardous,dangerousand/orveryexpensiveexperimentsandevensubstituteinaccessibleexperiments.ItisalsoimportanttopointoutthatthoughthedisciplinesatT&Mrepresentbroadscientificfields,fromphysicstobiology,theyallrelyonacom-moncoreofmathematicalmodeling,mathematical/numeri-calmethods,andsimulations.Thecomputationalproblemsusuallydealwithcomplexsystemsthatrequireawiderangeofscientificknowledge:problemformulation,mathematicalmod-elling,numericalanalysis,programmingforparallelexecution,hardwaresolutions,toolsforanalysisandvisualizationetc. ThereareaboutfiftypersonsactivelyengagedinT&M.ToorganizecommonactivitieswithinT&Mthereisasteeringcommittee,whichincludesIgorAbrikosov(theoreticalphysicsandheadoftheoryandmodeling),BoEbenman(theoreticalbiology),BengtPersson(bioinformatics),andSvenStafström(computationalphysics).LejlaKronbäck,AnnaSundin,Anna-KarinStålandMalinWahlbergactedasadministrativeassis-tants.MembersofT&Mcarryoutinnovativeresearch.In2012wepublished82papersininternationaljournalswithrefereesystem.Ourpapersarewellcited.Wegavelargenumberofinvitedtalksatinternationalconferences.MembersofT&Mareactiveinundergraduateandgraduateteaching. IFMisamotivatingplaceforconductingtheoreticalpro-grams,becauseitoffersclosecontactwithexperimentalactivi-tiesandeducationalprogramsinengineeringandscience.AnotherimportantaspectistheaccesstothecomputationalfacilitiesandexpertiseattheNationalSupercomputerCenter(NSC).Inparticular,ourgroupsandNSCareactivelyinvolvedinSwedishe-ScienceResearchCentre(SeRC).WeareactivelyparticipatingintheInterdisciplinaryMaterialsScienceLabora-toryforAdvancedFunctionalMaterials(AFM).Both,SeRCandAFMaresupportedbytheSwedishGovernment.WeareinvolvedinLinnaeusStrongResearchEnvironmentsupportedbytheSwedishResearchCouncil,inStrategicResearchCen-tres“Multifilms”,“CenterofOrganicElectronics(COE)”,andFUNCASEsupportedbytheSwedishFoundationforStrate-gicResearch.Also,wearepartofFORMASStrongResearchEnvironment“CentreofExcellenceforFarmAnimalWelfareResearch”,aswellasprojects“IsotopicControlforUltimateMaterialProperties”and“NanoparticlesbyPulsedPlasma”supportedbyKnutandAliceWallenbergsFoundation. T&Mrepresentsabroadandinterdisciplinaryresearchprogram.Tofindoutmoreabouteachotherresearch,weorganizeannualgroupmeetings,“TheoryandModelingDay”.In2012wemetonDecember19(seephoto)anddiscussedclimatemodeling.Theconferenceprogramin-cludedavisitandpresentationsatSMHI(Norrköping)fol-lowedbypresentationsofT&Malumni,workingatSMHI,ChristianAsker,MattiasJakobsson,andNinaHåkans-son,aswellasapresentationfromNSCbyJohanRaber.
th
eO
ry
an
d m
Od
eli
ng
70 IFM actIvIty report 2012
bioinformaticsstaffBengtPersson,professorBjörnWallner,senior lecturerThabitAlabsi,Masters studentJoelHedlund,Ph. D., also at NSCLejlaKronbäck,administrative assistantMalinLarsson,Ph. D., BILS expertFredrikLysholm,Ph. D. studentRobertPilstål,Ph. D. studentAnna-KarinStål,administrative assistantMalinWahlberg,administrative assistantLinusÖstberg,Ph. D. student
research
Characterisation of protein familiesWedevelopmethodsandstrategiesforproteinfamilycharac-terisation,includinghiddenMarkov-model-basedclassifica-tionofthesuperfamiliesofSDRsandMDRs(short-chainandmedium-chaindehydrogenases/reductases).(http://www.sdr-enzymes.organdhttp://www.mdr-enzymes.org).
Membrane protein structure predictionWedevelopmethodsthatcanpredictthestructureoffairlycomplexmembraneproteintopologiesfromsequenceinfor-mationalone.Wehavealsoextendedthesemethodstoutilizelimitedstructuralinformationsuchchemicalcross-crosslinks,metal-bridgesorpredictedinteractionstoimprovethesepredic-tionsfurther.Membraneproteinsareaclassofproteinswithaseveregapbetweenitsoccurrenceinthegenomes(30%)andthefractionofknownproteinstructure(<1%).Atthesametimetheyarehighlyinterestingsincetheyarethegatestothecellandareinvolvedinawidevarietyoffunctionssuchassignaltransduction,transportandcell-cellrecognition.Theyarealsothemaintargetsfordrugsonthemarkettoday.Structuralknowledgeforthisimportantclassofproteinsiscrucialtounderstandfunctionandtobeabletomodeltheeffectatthemolecularlevelofsmallmoleculesanddrugs.
Figure 1: Structural prediction of two salt-bridges that promotes helical hairpin membrane insertion. In a recent collaborative effort with experimental groups in Spain, we used computational modelling to explain mutational data (cf. Figure 1).
Prediction of protein domain interactionWearedevelopingmethodsthatutilizethemassiveamountofgrowingsequencedataavailabletofindsubtlecompensatorysinglepointmutationsinproteindomaintopredictinteraction
surfacesandexactlywhichresiduesthatinteract(cf.Figure2).Thisinformationwillimprovebothdockingandstructureprediction.Theresultforsingledomainproteinsisfantas-tic,around70%accuracygivenenoughsequencehomologs(>1000seqs).
Figure 2: Predicted residue contacts in the interface of a two domain protein highlighted in sticks, domain 1 in cyan and domain 2 in magenta.
Protein model quality assessmentWiththerapidincreaseincomputerpoweritisnoweasytogeneratethousandsofalternativemodelsforagivenproteinsequence,usingdifferentmethodsandalternativealignments.Thishastransformedthefieldofproteinstructurepredictionfrompredictingonesinglestructuretoselectingonestructureforalargesetofalternatives.Wehavepioneeredinthisfieldwithbothourconsensus-basedmethods(http://pcons.net)andwithourmachinelearningbasedmodelqualityassess-mentprograms,ProQandProQM.OurlatestversionofProQ,ProQ2wasrankedno1initsclassatCASP10,thebiennialcommunity-wideassessmentofthesemethods.
Structural calculations and predictionsWeusemolecularmodellingtechniquestostudymolecularinteractionsandsequencevariationsinrelationtostructuralchanges.Thismethodologyisappliedtopredicttheeffectsofmutationsincancer-relatedproteins.
FacilitatinganalysisofmassiveamountsofsequencingdataBioinformaticsmethodsandstrategieshavebeendevelopedforusageinlarge-scalemetagenomicsprojects.TheseincludeanautomatedhighlyefficientBLASTsearchandresultanalysispipeline,anovelalignmentalgorithmtoproducemorerobustandaccurateresultswith454data,andanewalignmenttoolHAXAT,allowingforon-the-flycorrectionofsequencereaderrors.Thenoveltechniqueshavebeenusedtoanalysenaso-
th
eO
ry
an
d m
Od
eli
ng
IFM actIvIty report 2012 71
pharyngealaspiratesofchildrensufferingfromseverelowerrespiratorytractinfections.
ELIXIRELIXIR,theEuropeaninfrastructureforbiologicalinforma-tion,isnowinitsimplementationphase.BengtPerssonisonthesteeringboard,andBILSisestablishingtheSwedishnode,whichwillstartitsactivitiesin2013.
BILSTheresearchinfrastructureBILS–BioinformaticsInfrastruc-tureforLifeSciences–hasincreaseditsactivitiesduringtheyearwithover250projectsnation-wide.BILSiscoordinatedfromLinköpingUniversity,andBengtPerssonservesasdirec-tor.
SeRCIFMBioinformaticsisveryactiveintherecentlystartedSwed-ishe-ScienceResearchCentre(SeRC),whereBjörnWallnercoordinatesthebioinformaticscommunity.
TeachingDuring2012,wehavearrangedcoursesinbioinformatics:atLiTH(TFTB29andTFBI14autumn2012)atHUincollaborationwithIBK(spring2012)
Popular scienceBengtPerssonisontheorganisingcommitteeoftheannualresearchschoolattheNobelmanorBjörkborn,Karlskoga,for2nd/3rdyearofSwedishhighschoolstudents.
computational physics
staffProfessors:PatrickNorman,SvenStafström(headofdivision)Associate professors: MagnusBoman,GueorguiGueorguiev,BoDurbeej,MathieuLinaresPostdocs:JonasBjörk,JoannaKauczor,Chang-FengFang
PhD students:ElhamMozafari,JonasSjöqvist,CeciliaGoyenola,OlleFalklöf,ThomasFransson,PauloVCMedeiros,BaswanthOruganti,RiccardoVolpiAdm. Assistants:LejlaKronbäck,Anna-KarinStål,MalinWahl-berg
generalIntheirworktodescribeelectronicstructureandelectronicmotionsinmolecularmaterials,theComputationalPhysicsgroupemploysawidevarietyofmethodsincludingmolecularmechanicsandmoleculardynamicsforstudiesofstructuresandmorphology,firstprincipleselectronicstructuretheory,responsetheory(forspectroscopicapplications),DFTandTD-DFT,QM/MMmethods,finitesizescalingforstudiesofelectronlocalization,theLandauerformalism,electronlatticedynamicsandMonteCarlomethodsforstudiesofchargetransport.Mostofthesystemsthatwearestudyingarebasedoncarbonbutalsosiliconbasedsystems,III-nitrides,etcarebeingmodeled.Theresearchcutsacrossarangeofdisciplines(molecularandsupramolecularelectronics,photonics,materi-alsandpolymerscience,cluster-assembledcompoundsandlow-dimensionalphases,devicephysics,photochemistryandbiochemistry)withmanyapplicationsinthefieldsofnanotech-nology,optoelectronics,andorganicelectronics. TheComputationalPhysicsgroupgivesalargenumberofcoursesongraduateaswellasunder-graduatelevels:ClassicalMechanics(undergraduate,MB),QuantumMechanics(under-graduate,MB),ComputationalQuantumChemistry(gradu-ate,PN,ML,BD),PotentialEnergySurfacesandDynamics(NGSSCschool,graduate,ML).Twodiplomastudentshavebeenworkinginthegroupduringtheyear. PatrickNormanwasappointeddirectoroftheNationalSu-percomputerCentre,NSC,atLinköpingUniversity.Thegrouporganizedthe2012annualmeetingofSvenskTeor-etiskKemi(STK),August23-24,2012.
highlights• MonteCarlosimulationsofchargetransportinorganicsystemswithtrueoff-diagonaldisorder,M.Jakobsson,M.Linares,S.StafströminJ.Chem.Phys.2012,137,114901
• CharacterisationofGadoliniumnanoparticules,J.Kauczor,M.Linares,P.Norman,etal.inJ.Nano.Res.,2012,14,1006
• Demonstrationof2Dhexagonal-AlNsheetsbyfirst-princi-plescalculations,EdwardF.deAlmeidaJunior,FernandodeB.Mota,CaioM.C.deCastilho,A.Kakanakova-Georgieva,G.K.GueorguievinEuropeanPhysicalJournalB,2012,85,48
• Characterizationoftheelusive5’-deoxyadenosylradicalincoenzyme-B12-mediatedreactions,D.Bucher,G.M.Sandala,B.Durbeej,L.RadomandD.M.Smith,inJACS,2012,134,1591
• Homo-couplingofterminalalkynesonanoblemetalsurface,Y.Zhang,et.alinNatureCommunications,2012,3,1286
cOllaBOratiOns within liU• CenterinNanoscienceandNanotechnology(CeNano)• CenterofOrganicElectronics(COE)• Thin-FilmPhysics,IFM• SurfacePhysicsandChemistry,IFM• Mol.Surf.Phys.andNanoScience,IFM• BiomolecularandOrganicElectronics,IFM• SemiconductorMaterials,IFM• OrganicElectronics,ITN
th
eO
ry
an
d m
Od
eli
ng
72 IFM actIvIty report 2012
external activities and netwOrks• Secretarygeneral,SwedishScienceResearchCouncil,secre-tarygeneral(SS)
• Boardmember,Nordforsk(SS)• Director,NSC(PN)• UnimolecularElectronicsCenter,UppsalaUniversity• SwedishResearchEstablishment• Co-authoringtheDALTONandDIRACprograms(PN)
individUal external cOllaBOratiOns• H.Ågren(KTH,Stockholm)• T.Saue(Toulouse,France)• F.Hanke(Liverpool,UK)• K.Ruud(Tromsø,Norway)• N.Avarvari(Angers,France)• D.Beljonne(Mons,Belgium)• R.Rivelino,F.Brito(FederalUniversityofBahia,Salvador,Brazil)
• J.Helliwell(Manchester,UK)• FernandoNogueira(Coimbra,Portugal)• J.Barth(TechnischeUniversitätMünchen,Germany)
ExternalfundingExternalfundingisabsolutelyessentialfortheactivitiesinthecomputationalphysicsgroup.WearegratefulforsupportfromanumberofsourcesincludingtheSwedishResearchCouncil(VR),EuropeanCommission,FoundationforStrategicResearch(SSF),SwedishDefence(FMV),CarlTryggerFoun-dation,OlleEngkvistFoundationandInternationalScienceProgramme(ISP).Inparticular,PatrickNormanis“rådsfor-skare”atVR,BoDurbeejhasaVRgrantforyoungresearch-ers,MathieuLinaresissupportedbytheSwedishe-ScienceResearchCentre(SERC)andGueorguiGueorguievhasaSwed-ishFoundationforInternationalCooperationinResearchandHigherEducation(STINT)projectforbilateralcollaborationwiththeFederalUniversityofBahiainBrazil.Highperfor-mancecomputingresourceswereprovidedbytheSwedishNationalInfrastructureforComputing(SNIC)andtheNationalSupercomputerCentre,NSC,atLinköpingUniversity.
theoretical biologystaffProfessors: BoEbenman(headofdivision),UnoWennergrenAssociate professors:PeterMünger,TomasJonsson(guestlec-turer)Postdoc:AnnaEklöf,TomLindströmPhD students:SofiaBerg,PeterBrommesson,AlvaCurtsdot-ter,DavidGilljam,SaraGudmundson,NinaHåkansson,LindaKaneryd,JennyLennartsson,MalinSetzer,StefanSellman,TorbjörnSäterbergAdministrative assistant: AnnaSundin
generalTherearetworesearchlabsinthedivisionofTheoreticalBiology:PopulationandCommunityEcologylab(PACElab)
headedbyProfessorBoEbenmanandSpatiotemporalBiol-ogylab(SPABIOlab)headedbyProfessorUnoWennergren.Presentresearchprojectsinclude:
• Theresponseofecosystemstospeciesloss:usingcommu-nityviabilityanalysistoquantifytheriskandextentofextinc-tioncascades(BoEbenmanPI)
• Usingsensitivityanalysistoidentifykeystonespeciesandkeystonelinksinecosystems(BoEbenmanPI)
• Therobustnessofecosystemstoanincreasinglyvariableworld:effectofclimatechangeonthestructureandfunction-ingofecosystems(BoEbenmanPI)
• Theresponseofmetacommunitiestohabitatandspeciesloss:theroleoflocalandregionalprocesses(BoEbenmanPI)
• Ecologicallyeffectivepopulationsizes(BoEbenmanPI)• Populationgrowthinheterogeneouslandscapes:cropman-agementstrategiesforeffectivebiologicalcontrolofpests(UnoWennergrenPI)
• Reducingtheriskofspreadofdiseases(UnoWennergrenPI)• Longtermstrategiesforpreservingspeciesinadynamiclandscape(UnoWennergrenPI)
• Analysisandoptimizationofanimaltransport:logisticsandanimalwelfare(UnoWennergrenPI)
Membersofthegroupareinvolvedinseveralcoursesatgradu-ateaswellasundergraduatelevelsincludingcoursesinecol-ogy,populationecology–theoriesandapplications,mathemati-calmodelsinchemistryandbiology,andconservationbiology.
external activities and netwOrksParticipation in:TheESFResearchNetworkingProgrammeSIZEMIC(Body-sizeandecosystemdynamics:integratingpureandappliedapproachesfromaquaticandterrestrialecologytosupportanecosystemapproach).TheprogrammeisfundedbytheSwed-ishResearchCouncil(VR)andseveralothernationalresearchcouncilsinEurope.BoEbenmanisamemberofthesteeringcommitteeoftheprogramme.SofiaBerg,AlvaCurtsdotter,DavidGilljamandAnnaEklöf(presentlyapostdocattheUniversityofChicago)areactiveintwooftheworkinggroupsorganizedbythenetwork.MathematicsintheLivingEnvironment(MILE).Erasmus/SocratescollaborationwithYorkUniversity.
external cOllaBOratiOnsPACELab–Prof.RichardLaw(YorkUniversity,UK),Prof.OwenPetchey(UniversityofZürich,Switzerland),Dr.GuyWoodward(QueeenMaryUniversityofLondon,UK),Prof.MarkEmmerson(UniversityofCork,Ireland),Prof.UlrichBrose(DarmstadtTechnicalUniversity,Germany)andDr.TomasJonsson(SkövdeUniversity,Sweden).SPABIOLab-Prof.MikaelRönnquist(BergenUniversity),Dr.AnnieJonsson(SkövdeUniversity),Prof.BoAlgers(SLU),ProfColleenWebb(ColoradoStateUniversity).DrMichaelTildesley(WarwickUniversity)andDocentSusannaSternbergLwerin(SLU).
external fUndingFinancialsupporthasbeenreceivedfromtheSwedishRe-searchCouncil(VR),SwedishResearchCouncilforEnviron-ment,AgriculturalSciencesandSpatialPlanning(FORMAS),SwedishAgriculturalBoard,SwedishEmergencyManage-mentAgency,andDepartmentofHomelandSecurityUS.
th
eO
ry
an
d m
Od
eli
ng
IFM actIvIty report 2012 73
theoretical physicsstaffProfessors:IgorAbrikosov (HeadofT&M),Karl-FredrikBerg-gren,MagnusJohansson,BoSernelius,SergeiSimak,IrinaYakimenkoAssociate Professors: PeterMüngerAssistant Professors:RickardArmiento,WeineOlovsson,LeonidPourovskii,FerencTasnadiPostdoctoral fellows: MarcusEkholm,QingguoFeng,OlleHell-man,PeterStenetegPhD students:ViktorIvady,PeterJason,HansLind,AlexanderLindmaa,IgorMosyagin,OlgaVekilova,FeiWang
Administrative assistants:LejlaKronbäck,Anna-KarinStål,MalinWahlbergMasters students:LasseHultbergBachelor students:GustafLundberg,JesperNorell,JoakimAn-dersson,FelixFaber,PatrikHarryssonProject student:JohanBergmanVisiting researchers:Prof.LennartStenflo,Sweden,Dr.MathiasBoström,Sweden,Dr.AlenaPonomareva,Moscow,Russia,Dr.MaximBelov,Moscow,Russia,PhDstudentAntonNikonov,Tomsk,Russia,PhDstudentAndreyLugovskoj,Moscow,Rus-sia,PhDstudentPavelKorotaev,Moscow,Russia,PhDstudentKatarinaKirr,Kharkiv,Ukraine
appOintments in 2012SergeiSimakwasappointedprofessorofTheoreticalPhysicsatLinköpingUniversity.MagnusJohanssonwasappointedDirectorofStudiesinPhysics.RickardArmientowasappointedAssistantProfessor.MarcusEkholmwasappointedPostdoctoralFellow.QingguoFengwasappointedPostdoctoralFellow.OlleHellmanwasappointedPostdoctoralFellow.PeterStenetegwasappointedPostdoctoralFellow.
general Theresearchintheoreticalphysicsisfocusedoncondensedmat-terphysics/theoreticalmaterialsscience,nanoscience,electro-magneticmodeling,andnon-linearphysics.Typicalprojectsare:-Electronicstructuretheoryandfirst-principlessimulationsofmaterialsproperties(I.Abrikosov,S.Simak,F.Tasnadi,T.Marten,M.Ekholm).-Phasestabilities,phasetransformations,andelasticproper-tiesofmaterilals(F.Tasnadi,H.Lind,I.Abrikosov,M.Ekholm,O.Vekilova,O.Hellman,P.Steneteg,S.Simak)-Theoreticalstudyofmaterialswithfastionicconductivityforenergyapplications(S.Simak,O.Hellman)-Physicsofstronglycorrelatedmaterials(L.Pourovskii,M.Ekholm,Q.FengV.Ivady,I.Abrikosov)-Theoreticalspectroscopy(W.Olovsson)-Materialsmodelingandhighthroughputenergymaterialdesign(R.Armiento,A.Lindmaa,J.Bergman)-Nanophysics,ultrasmallsemiconductorstructuresandde-vicesinthequantumregime,quantuminformation,transport,quantumandclassicalwavesincavitiesandconstrictionswithoscillatingboundaries(I.I.Yakimenko,K.-F.Berggren)-Nonlineareffectsonenergytransportinperiodicandaperi-
odicspatiallymodulatedsystems(M.Johansson,P.Jason)-Studiesofdispersionforcesinnanoscience,ofthefunda-mentalnatureoftheCasimirforceanditstemperaturedepend-ence(B.E.Serneliusand M.Boström)-GravitationasaCasimirinteration(B.E.Sernelius)-LuminescenceinZnOnanorods,nanotubesandnanoparti-cles(B.E.Sernelius)-Moleculardynamicssimulations(P.Münger,P.Steneteg,O.Hellman,O.Vekilova,S.I.Simak,I.Abrikosov).
Weparticipateinleadingnationalresearchprograms.Inparticular,weareactivelyinvolvedinanewSwedishe-ScienceResearchCentreandintheInterdisciplinaryMaterialsScienceLaboratoryforAdvancedFunctionalMaterials,bothsupportedbytheSwedishGovernment.IgorAbrikosovisleadingtheNet-workforexcellentresearch“MaterialsScienceforNewEnergyTechnology”.WearepartoftheStrategicResearchCenters“Multifilms”and“FUNCASE”,bothsupportedbytheSwedishFoundationforStrategicResearch.We,togetherwithCompu-tationalPhysicsGroup,buildthenode”MaterialsModeling”withintheLinköpingLinnaeusInitiativeforNovelFunctionalMaterials,supportedbytheSwedishResearchCouncil.Also,weparticipateinprojects“IsotopicControlforUltimateMate-rialProperties”and“NanoparticlesbyPulsedPlasma”sup-portedbyKnutandAliceWallenbergsFoundation.AttheEuropeanlevel,wewereactivelyinvolvedinEuropeanNetworkPsi-k,whereProf.AbrikosovisaspokespersonforWorkingGroup“AlloyTheory”. Thetheorygroupgivesalargenumberofcoursesongradu-ateaswellasundergraduatelevels.Theteachinghasawiderangeofcourses,includinganalyticalmechanics,quantumtheory,relativisticquantummechanics,condensedmatterphysics,many-bodyphysics,statisticalmechanics,quantumin-formationandcomputing,elementaryparticlephysics,cosmol-ogy,chaosandnonlinearphenomena.PeterMüngerrepresentsLinköpingUniversityintheERASMUSAcademicNetwork:StakeholdersTuneEuropeanPhysicsStudies-Two(STEPSTWO).Itisacollaborationbetweenmorethan70EuropeanUniversityPhysicsDepartmentswiththeaimtoinvestigateandimprovevariousaspectsofphysicseducation.
phd examinatiOnsMarcus Ekholm,“Theoreticaldescriptionofcomplexmagnetismintransitionmetalsandtheiralloys”,DissertationNo.1452
Olle Hellman, “Thermalpropertiesofmaterialsfromfirstprin-ciples”,DissertationNo.1453
Peter Steneteg,“Developmentofmoleculardynamicsmethodol-ogyforsimulationsofhardmaterials”,DissertationNo.1454
2012 highlightsImportanceofcorrelationeffectsinhcpironrevealedbyapressure-inducedelectronictopologicaltransition[K.Glazyrin,L.V.Pourovskii,L.Dubrovinsky,O.Narygina,C.McCammon,B.Hewener,V.Schünemann,J.Wolny,K.Muffler,A.I.Chumakov,W.Crichton,M.Hanfland,V.Prakapenka,F.Tasnádi,M.Ekholm,M.Aichhorn,V.Vildosola,A.V.Ruban,M.I.Katsnelson,I.A.Abrikosov,Phys.Rev.Lett.(inpress)]Ironisthemostabundantelementonourplanet.Itisoneofthemostimportanttechnologicalmaterialsand,atthesametime,oneofthemostchallengingelementsforthemodern
th
eO
ry
an
d m
Od
eli
ng
74 IFM actIvIty report 2012
theory.Asaconsequence,thestudyofironandiron-basedalloyshasbeenafocusofexperimentalandcomputationalresearchoverthepastdecades.Whilethestructuralpropertiesofironandiron-nickelalloysatpressuresbelow100GPaarewellestablished,theirelectronicandmagneticpropertiesarestilldebated.Ourstate-of–the-artabinitiocalculationsoftheFermisurfaceofFewithinthedynamicalmean-fieldtheory(DMFT)revealachangeofitstopology,theso-calledelec-tronictopologicaltransition(ETT)atpressuresofabout30-40GPa(seethefigure).TheETTmanifestsitselfthroughanoma-lousbehavioroftheDebyesoundvelocity,c/alatticeparameterratioandMössbauercentershiftobservedbyourexperimentalcolleagues.TheETTisabsentinone-electroncalculations(seethefigure)andrepresentsaclearevidenceoftheimportanceofcorrelationeffectsinFeathighpressure.
The DMFT k-resolved spectral function (a and b), the corresponding one-electron band structures (c and d) and the DMFT Fermi surfaces (e and f ) are shown for two volumes corresponding to low and high pressure. DMFT shows that ETT occurs around the L and Γ points.
Boundstates,electronlocalizationandspincorrelationsinlow-dimensionalGaAs/AlGaAsquantumconstrictions[I.I.Yaki-menko,V.S.Tsykunov,andK.-F.Berggren,J.Phys.:Condens.Matter25,072201(2013),FastTrackCommunication]
Weanalyzetheoccurrenceoflocalmagnetizationandtheef-fectsofelectronlocalizationindifferentmodelsofquantumpointcontacts(QPCs)usingspin-relaxeddensityfunctionaltheory(DFT/LSDA)bymeansofnumericalsimulations.InthecaseofsoftconfinementpotentialsthedegreeoflocalizationisweakandwethereforeobserveonlytracesofpartialelectronlocalizationinthemiddleoftheQPC.Inthepinch-offregimethereis,however,distinctaccumulationattheQPCedges.Attheotherend,strongconfinementpotential,low-electrondensityintheleadsandtoporimplantgatesfavorelectronlocalization.Insuchcasesonemaycreateavarietyofelectronconfigurationsfromasinglelocalizedelectrontomorecom-plexstructureswithmultiplerowsandWignerlattices.
0
100
200
300
400
0100
200300
4000
0.5
1
1.5
x 10−3
y(nm)
x(nm)
ρ(n
m
)−2
Electron density for up-spin electrons in the case of implant gate geometry for the GaAs/AlGaAs heterostructure.
Retardedinteractionsingraphenesystems[BoE.Sernelius,Phys.Rev.B85,195427(2012)].
Wefirstdemonstratedhowtwo-dimensionalsheetsareincorporatedintheformalismforplanarstructures.Thenwederivedtheinteractioninthegeometryoftwofreestandinggraphenesheetsandofonegraphenesheetaboveasubstrate.Numericalresultswereproducedforthefullyretardedinterac-tionat0Kandatroomtemperatureforundopedanddopedgraphene.Additionalresultsweregivenbothforagoldsub-strateandforanidealmetalsubstrate.Wefoundthatfortwofreestandingundopedgraphenesheetstheretardationeffectsarenegligible.Thesameholdsforanundopedgraphenesheetaboveagoldsubstrate.Thisbehaviorisveryunusualandistheresultoftheparticularbandstructureofgraphene.However,fordopedgraphenesheets,twofreestandingoronefreestand-ingaboveagoldsubstrate,theretardationeffectsareboundtobeimportantatlargeenoughseparations.However,atT=300Ktheretardationeffectsagaingoaway.
The attractive retarded interaction energy as a function of separation, d, at room temperature between (a) two undoped graphene sheets and (b) two doped graphene sheets. The separate contributions from TM and TE modes are shown. The interaction energy between two ideal metal half spaces is also shown as a reference result.
ExactlocalizedeigenstatesforanextendedBose-Hubbardmod-elwithpair-correlatedhopping[P.JasonandM.Johansson,Phys.Rev.A.85,011603(R)(2012)(RapidCommunication)]
Theincreasingprecisionandtunabilityofultracoldatomsinopticallatticeshasgreatlyincreasedtheinterestforquantumlatticemodels,suchastheBose-Hubbardmodel.Ordinarilyonlyinteractionsbetweenbosonicatomslocatedonthesamesiteareincluded,butextendingthemodelwitheffectsfromlonger-rangeinteractionssuchaspair-correlatedhoppingbe-tweennearestneighboursmayleadtonewphysicaleffects.WeshowedthatthisextendedBose-Hubbardmodelhasexactone-site“QuantumLatticeCompactons”,beingeigenstateswithcompletelocalizationofallparticlesatonesite.Theseappearatparametervalueswheretheone-particletunnelingisexactlycanceledbynonlocalpaircorrelations,andcorrespondinthelimitofinfiniteparticlenumbertoexactcompactsolu-tions(“discretecompactons”)ofaclassicallatticemodel.Clas-sicalcompactonsexistingatotherparametervalues,aswellasexactmultisitecompactons,genericallygetdelocalizedbyquantumeffects,butstronglocalizationappearsasymptoticallyforincreasingparticlenumber.Compactonsareinterestingforapplicationsduetotheirtail-lessnature,prohibitingmutualinteractionsunlessbeingindirectcontact.
(a)
−2 −1 0 1 2−1
−0.5
0
0.5
1
Q2/N
Q5
0
0.2
0.4
0.6
0.8
1(b)
−2 −1 0 1 2−1
−0.5
0
0.5
1
Q2/N
Q5
0
0.2
0.4
0.6
0.8
1
Projection of the highest eigenstate on the single-site localized basis state as function of one-particle (Q2/N) and pair-correlated (Q5) hopping parameters, for (a) 16 and (b) 26 particles in a 4-site extended Bose-Hubbard model. The compacton appears as a white stripe.
th
eO
ry
an
d m
Od
eli
ng
IFM actIvIty report 2012 75
2012 cOllaBOratiOnsCollaborations within LiU-InternationalInterdisciplinaryMaterialsScienceLaboratoryforAdvancedFunctionalMaterialsfromtheSwedishGovernment.-LinköpingLinnaeusInitiativeforNovelFunctionalMaterials.-SSFStrategicResearchCentre“Multifilms”.-SSFFrameprogram“FUNCASEFunctionalCarbidesandAdvancedSurfaceEngineering”-KAWResearchCentre“IsotopicControlforUltimateMaterialProperties”-KAWResearchCentre“NanoparticlesbyPulsedPlasma”-NationalSupercomputerCenter(NSC).-VisualizationCentreatNorrköping.-PeterMünger,collaborationwiththegroupofProf.BoEben-man,TheoreticalBiology,IFM.
External activities and networks-SwedishPhysicalSociety(K-FBerggren,chairman,alsoSwed-ishdelegatetoEuropeanPhysicalSocietyCouncil));legallyrepsonsiblefor“Fysikaktuellt”.-I.Abrikosovwasaco-organizerofInternationalSymposiumandWorkshoponCorrelatedElectronsandMaterialsProper-tiesofCompoundsandAlloys,PortoHeli,Greece.-I.AbrikosovandS.Simakwereco-organizerofInternationalconference“ElectronicstructuretheoryformaterialsModel-ling:fromearlydaystocurrentsuccess”,Stockholm,Sweden.-K-FBerggrenwasco-organizerofNorditaWorkshopSpin2012:”Spin-RelatedPhenomenainMesoscopicTransport”.Participationin:-Ψk Network. -NordForskNetwork:Nanospintronics–TheoryandSimula-tions(coordinatorC.Canali,LinnaeusUniversityofKalmar,Sweden);I.YakimenkonodecoordinatorLinköping.-PeterMüngerparticipatesin”The’StakeholdersTuneEuro-peanPhysicsStudies-Two’(STEPSTWO)initiativebythe’EuropeanPhysicsEducationNetwork’(EUPEN)withintheERASMUSprogramme(http://www.stepstwo.eu/).
Individual external collaborations-IgorAbrikosovandProf.MichelBarsoum(Drexel University,USA),Prof.L.Dubrovinsky(UniversitätBayreuth,Germany),Prof.M.I.Katsnelson(UniversityofNijmegen,TheNether-lands),Prof.Yu.KhVekilov(MoscowInstituteofSteelandAlloys,Russia),Prof.JMSchneider(AachenUniversity,Ger-many),Prof.J.Neugebauer(Max-Planck-InstitutfürEisenfor-schung,Germany).-IgorAbrikosov,ViktorIvady,RickardArmientoandDr.AdamGali(HungarianAcademyofSciences)-BoSerneliusandProf.G.D.Mahan(PennStateUniversity,USA),Prof.AntonioFerreiradaSilva(SalvadordeBahia,Brazil),Prof.BarryNinham(AustralianNationalUniversity,Australia),Prof.ChrisBinns(UniversityofLeicester,England),Dr.MikeWard,UniversityofBirmingham,Birmingham,UK,andDr.AstridLambrecht,ÉcoleNormaleSupérieure,Paris,France.-MagnusJohanssonwithDr.R.A.Vicencio(UniversidaddeChile,Santiago),K.Kirr(NationalAcademyofSciencesofUkraine,Kharkiv),Dr.S.DerevyankoandDr.Y.Prylepskiy(AstonUniversity,UK),Dr.A.V.Yulin(UniversidadedeLisboa,Portugal).-SergeiSimakandProf.O.M.Krasilnikov,Prof.Yu.Kh.VekilovatNUST”MISIS”,Russia,Prof.N.V.SkorodumovaatKTH-LeonidPourovskiiandMarcusEkholmwithProf.AntoineGeorges,ÉcolePolytechnique,Paris,France-K.-F.BerggrenandI.YakimenkowithProf.SirM.Pepper(CavendishLaboratory,Cambridge,UKandLondonCentre
forNanotechnology,UCLandwithProf.J.Bird(UniversityofBuffalo,USA),-ResearchPolicyInstitute,LundUniversity/DeptforPhiloso-phy,LinguisticsandTheoryofScience,GothenburgUniversity(OlofHallonsten/K-FBerggren)-PeterMünger,collaborationwithAnnaEklöf,UniversityofChicago,USA,thegroupofTomasJonssonatHögskolaniSkövdeandCélineHauzyatUniversitePierre&MarieCurie,Paris,Franceon”Dynamicsinfoodwebs-localandregionalprocesses”.-WeineOlovssonwiththegroupofProf.ClaudiaDraxlatHum-boldtUniversitätzuBerlin(previouslyatLeobenUniversity),thegroupofProf.IsaoTanakaatKyotoUniversity,Japan,andDr.VenkataRamaRaoMedicherla,Siksha’O’AnusandhanUniversity,Bhubaneswar,India-RickardArmientoandAnnE.Mattsson(SandiaNationalLaboratories,USA),StephanKümmel(UniversityofBayreuth,Germany),PredagLazić(RudjerBoskovicInstitute,Croatia),MarcoFornari(CentralMichiganUniversity,USA),BorisKoz-insky(RobertBoschLLC,USA).-OlleHellmanandProf.D.Broido,BostonCollege,USA
External visits-MarcusEkholmspentatotalofonemonthattheÉcolePolytechniqueinParis,France,withasupportfromthePHCDahléngrant.-OlleHellmanvisitedBostonCollege,USA,toinitiatecollabora-tiononthermalconductivitysimulations.-ViktorIvadyhadalong-termvisittoHungarianAcademyofSciences.-IgorAbrikosovvisitedTomskStateUniversity,Russia.-LeonidPourovskiihassharedemploymentbetweenIFMandÉcolePolytechnique,Paris,France.-SergeiSimakvisitedNUST”MISIS”,Russia.-MagnusJohanssonvisitedUniversidaddeChile,Santiago.-WeineOlovssonvisitedKyotoUniversity,UniversityofTokyoandWasedaUniversity,Japan.
Popularization of science -Startpageofourgroupweb-sitehttp://www.ifm.liu.se/theo-mod/theophys/isusedtopresenthighlightsofourrecentresearchforthegeneralpublic.-IgorAbrikosovwasinterviewedfornewspaperDagensIndustrienclosure“ForskningiFramkant”(Novemberissue).-Fysikaktuellt(K.-F.Berggren).-”Parametricinstabilitiesandpatternformation”OhlinLabora-tories,Uppsala(KOhlin/K-FBerggren)-PresentationoftheNobelPrizeinPhysics2012(I.YakimenkoforIFMandY-programstudents).-Higgsparticle(ÖstgötacorrespondentenandtheSwedishnews-papers;K.-F.Berggren,MagnusJohansson).-MagnusJohanssongaveatalk”Quasicrystalsandaccelerat-inguniverse-infinitiesinthe2011Nobelprizes”attheinter-disciplinarysymposium”ADayonInfinity”arrangedbythedepartmentofPhilosophy,LiU,23March2012.
th
eO
ry
an
d m
Od
eli
ng
76 IFM actIvIty report 2012
AFMTheSwedishGovernmentStrategicResearchArea(SFO-Mat-LiU)inMaterialsScience;InternationalInterdisciplinaryMaterialsScienceLaboratoryforAdvancesFunctionalMaterials
Director:Prof.LarsHultmanDeputy Director: MagnusBerggren(ITN)
AFMencompasses240researchersfromthedepartmentsIFM,ITNandIEI,andapartnerACREO,organizedintointer-activecollaboratingteams.
management BOard:• LarsHultman(Chair)• MagnusBerggren(ViceChair)• IgorAbrikosov• ErikJanzén• KajsaUvdal• HansHögberg(ResearchManager)• KirstinKahl(Administrator)
AFMisinoperationsince2010.Itcontributesatthehighestleveltothecreationofknowledge.Materialsscienceisatopre-searchpriorityatLinköpingUniversityandstronglysupportedbyindustryandinstitutes.Itisextremelyproductiveasjudgedbybothacademicandsocietalmetrics. Weenvisionthatscienceisfocusedontheatomic/molecular-scaledesignofnewmaterialswillprovidesolutionstobroadly-basedsocietalissues,includingjobs,health,energy,environ-ment,andsustainability.
OUr missiOn is tO:1. BuildaCoordinatedExcellentResearchEnvironmentthat
integratestheory,simulations,andexperiments2. Targetandrecruitinternationallyleadingresearchersin
complementaryfields3. Promotingtenure-trackpositionsandcareerpathsfor
young(star)researchers4. Investigateandopennewandcreativeresearchfrontswith
commensurateindustrialopportunities5. Createnovelhigh-performancesoft,hard,andhybrid
smartmaterials6. Explorenewconceptsinsynthesis,processing,analysis,
andcomputerbasedmodeling7. Provideforstate-of-the-artlaboratorysettings.Investin
equipmentwithrelevanceforSweden’sinfrastructureinsynchrotronwork,microelectronicsprocessing,neutronfacilities,supercomputing,andelectronmicroscopy
8. LinkresearchtoLiU’slargeundergraduate,internationalmaster,andgraduateprogramsanddoctoralprograms
9. ExpandcoreR&DcapabilitiesbyenlargingandprotectingtheIPRbaseofSwedishcompaniesinkeyindustrialsec-torsandfosternewgrassrootspin-offcompanies
10. Facilitatetheintroductionofnovelsmartmaterials,withspecificallydesignedproperties,intoproductionbySwed-ishindustry
indUstry reference panel:• HansHentzell,PhD,CEOSwedishICTResearchABandAcreoAB
• PeterIsberg,PhD,AdjunctProfessor(LiU),TechnicalMan-ager,MachinesandAutomationProducts,ABBAB
• Dr.IngridReineck,PhD,Manager,SandvikToolingAB• HansSjöström,PhD,Docent,GeneralManager,SKFNova• Jan-EricSundgren,PhD,SeniorVicePresidentPublicandEnvironmentalAffairs,ABVOLVO
ThechargetotheindustryReferencePanelistoprovidebenchmarkingandarobustcritiqueoftheAFM’sperformanceintermsoftechnologicaltransfer,problem-orientedresearch,industrycollaboration,IPRpolicyandperformance,statisticsonspin-offcompaniesandresearchersplacesinindustry.
agOra materiae – the materials science gradUate schOOlAgoraMateriaeisournewgraduateschoolwithamultidisci-plinarydirectionwithinMaterialPhysics.Itinvolvesabout20researchgroups/areasatIFM,IE,ITN,withaninterestinhardandsoftmaterials.
Agora Materiae is managed by:• PerOlofHoltz(Head)• StefanKlintström(Mentor)• KirstinKahl(Administrator)Agora Materiae Student Council:• RogerMagnusson,IFM,2012• JonasBergqvist,IFM,Spring2012• LindaKarlsson,IFM,Spring2012• MartinEriksson,IFM,2012• ThomasFransson,IFM,2012• ZiaUllahKhan,ITN,startFall2012• MattiasCalmunger,IEI,startFall2012
afm highlights 2012WestartedtheGraduateSchoolAGORAMATERIAEinMateri-alsScience(seeseparatesectionformoreinformation).
ResearchersoftheAFMenvironmentistakingpartintheGrapheneFlagship.
OnepaperacceptedinNature NanotechnologyontheMagneticquantumratcheteffectingrapheme.
WepublishedinSciencethefirstgenerationofbiopolymerbasedpolymerelectrodesofrelevanceforenergystorageinsupercapacitorsandpossiblyinsecondarybatteries.
ThefirstreportedcomplementaryandintegratedchemicalcircuitswerepublishedinNature Communications,addressingneuronalsignalsinvivoandinvitro.Among212otherpeer-reviewedpublications,wehavepub-lishedthefirstreviewinthefieldofCl-basedSiCgrowth(Chemical Reviews)andidentifiedtheoriginofthelifetimelimitingdefectinbulkSiC(Physical Review Letters).
ThegrantsofAFMhavebeenpartiallyinvestedinbuildingstrategicinfrastructureforindustrycollaboration.AnewXPSsystemwascommissionedin2012withco-financingfromthevice-chancellor.WehavealsoupgradedourmaterialstestingLabwithstraintestandafurnace.Anewmass-energyanalyzerforPVD-plasmacharacterizationwascommissioned.
Weinstalledtheadvancedmicro-Ramansystemcapableofoperatingwithinthetemperaturerangeof4-300Kandundermagneticfieldsupto5T.
re
se
ar
ch
ce
nt
er
s
IFM actIvIty report 2012 77
BerggrenreceivedtheWallenbergScholarandbecameanelectedmemberoftheRoyalSwedishAcademyofSciences.
DocentJohanaRosénbecameKAWAcademyFellow.
XavierCrispinwasawardedtheTageErlanderprize,andtheERCstartinggrant.
LarsHultmanwasnamedEditor-in-ChiefforthejournalVACUUMandPerEklundRapidCommunicationsEditorofVACUUM.
TheOrganicElectronicsteamreceivedmajorgrants,incl.theSSFFrameworkPrograminMaterialScience(MembraneChromatography,togetherwithFredrikHöök,Chalmers),theVINNOVA-UDI(PrintedElectronicsforInternetofThings,withAcreoAB)andKAWproject(Bioelectronicsforplantsci-ence,togetherwithMarcusGrebe,UmeåU.).
WeweregrantedtheEU-FP7-NMPprojectLife-Long Joints: Silicon Nitride Coatings for Improved Implant Function.
WeweregrantedtheEUFP7-PEOPLE-2012-IRSESInterna-tionalResearchStaffExchangeSchemePIRSES:Development of Nanotechnology-based Bisen-sors.
AVRIndustryGraduateStudentProjectwasgrantedforLudvigLandälvofSandvikCoromantABtowiththeThinFilmGroupatLiU.
Wefoundedthecompanies:TiÅ,LumiSignsAB,n-WORKSAB,andREMAB.
RecentlygraduatePhD’sfromAFMareemployedbyindus-try(e.g.,MattiasSamuelssonatImpactCoatingsAB,JonasLauridsenatSECOToolsAB,LarsJohnsonatSandvikAB;AxelKnutssonatAlfaLavalAB,AndersErikssonatBalzerOerli-con).
CeNanoTheCentreinNanoScienceandTechnology(CeNano)isanorganizationwithintheTechnicalFacultyofLinköpingUniver-sity.ThemissionofCeNanoistostrengthenandsupportthecompetencewithinnanoscienceandnanotechnologyofthefaculty.Thisismadebygatheringresearchers withnanoactivi-
tiesinthecentreandbyactingforincreasedcollaborationsandcommonprojectsinthenanorealm.CeNanoalsoactsfordevelopmentandcoordinationofthegraduateandundergraduateeducationinthisscientificarea.Includedinthemis-sionofCeNanoisalsoexposureofthefaculty’snanoactivitiesbyseminars,actionsforcontactestablishment,takinginitiativetolargerprojects,etc.
the BOard Of cenanO:• LarsHultman, Chair• IgorAbrikosov• Per-OlofHoltz• OlleInganäs• Per-OlovKäll• KajsaUvdal,DirectorofCeNano
prOjects sUppOrted cenanO in 2012: • Self-assemblyofAnisotropiNanostructureforMetalEn-hancedFluorescenceandPlasmonicallyTriggeredDrugReleasePI:DanielAili
• BiocompatibilitystudiesofengineerednanoparticlesaimedforuseinbiomedicalapplicationsPI:CarolineBrommesson
• Nanoparticle-basedlocalizedsurfaceplasmonresonanceexcitationforimprovedlateralresolutioninSPRimagingofmarinefoulingorganismsPI:ThomasEderth
• TheoreticalstudiesofthemixingthermodynamicsofsolidsolutionsofScNwithothermononitridesforthepurposeofthermoelectricthinfilmsPI:PerEklund
• BoronNitride–theultimatesubstrateforGraphenePI:AnneHenry
• SynthesisandCharacterizationofChiralOrganicNanostruc-turesPI:KennethJärrendahl
• Nano-scaleparticlesforefficientpolymer-basedlight-emit-tingdevicesPI:Per-OlofHoltz
• SuperhardNanocrystallineMaterials:TheoryandExperi-mentsPI:FerencTasnadi
• ExploringZnONanostructuresEmbeddedinPolymersforEnhancedPerformanceinLightEmissionandPhotovoltaicApplicationsPI:FenglingZhang
• UltrabrightSemiconductingPolymerDots(Pdots)forSpe-cificCancerCellTargetingPI:XuanjunZhang
highlightsExploringZnONanostructuresEmbeddedinPolymersforEnhancedPerformanceinLightEmissionandPhotovoltaicApplicationsFenglingZhangIFM,LiUWepreparedvariedZnOnanostructures.Thelightemissionofthenanorodswasstudiedbyµ-PLinthetemperaturerangeof4–300K.ThelowtemperaturePLspectrumofhighqualityZnOnanorodsissolelydominatedbyNBEemission,whichconsistsofseveralcloselylocatedpeaks,attributedtothedonorboundexcitonemission(D0X)(Fig.1a).TheZnOnanoar-rayaselecrtronacceptorwasintegratedinHybridsolarcells(HSCs)withpolymerPoly[2-methoxy-5-(2β-ethyl-hexyloxy)-1,4-phenylenevinylene](MEH-PPV)aselectrondonor.Thecurrentdensity(J)-voltage(V)curvesareshowninFig.1b.TheperformanceoftheHSCsismainlylimitedbylargedimen-sionsofZnOnanostructures(diameter100nmandlength500nm),whichcanbeimprovedwithreducedthedimensionsofnanostructuresbyoneorderofmagnitude.
re
se
ar
ch
ce
nt
er
s
78 IFM actIvIty report 2012
Figure 1 LT PL spectrum of ZnO nanospikes (a) and illuminated J-V curves of the devices using different MEH-PPV/ZnO weight ratios (b).
Nanoparticle-basedlocalizedsurfaceplasmonresonanceexcitationforimprovedlateralresolutioninSPRimagingofmarinefoulingorganismsThomasEderthIFM,LiUUnderstandinghowmarineorganismsexploreandinteractwithsurfacesisessentialforthedevelopmentofefficientandnon-toxicantifoulingcoatings.Inthisprojectwetakeadvan-tageoflocalizedplasmonsexcitedinsurface-boundmetalnanoparticlestoimprovetheresolutioninsurfaceplasmonresonanceimagingofsporesandlarvaeofmarineorganismsandtheirinteractionwithsurfaces.
Figure 2 Zoospores of the alga Ulva linza (left) and an array of 15 nm gold nanoparticles (right)
VINNOVA Excellence Center in Research and Innovation on Func-tional Nanoscale Materials
FunMatisinequalpartsfinancedbyVINNOVA,industryandtheuniversity.TheCenterrunsbetween2007and2016withthemissionto:
• Providethestrongestresearchplatformforaconsortiumofcompaniesintheareaofadvancedsurfaceengineering,withafocusonnanotechnologyfortools,components,contacts,andsensors
• Offerknowledge-baseddesignoffunctionalmaterialsonthenanoscaletoprovideuniqueandimprovedsurfacepropertieswithcommensurateindustrialopportunities
• ExpandcoreR&DcapabilitiesbyenlargingandprotectingtheIPRbaseofSwedishcompaniesinkeyindustrialsectors.
TheCenterisbasedatIFM,LinköpingUniversity.
hOmepagewww.liu.se/forskning/funmat
research prOgramFunMatisaleadingenvironmentforproblem-orientedresearchonnanoscalefunctionalmaterials.Itoffersscientificcompe-tenceandinnovativesolutionsinadvancedsurfaceengineering.Wedevelopthinfilmprocessing,advancedmaterialsanalysis,andIPR.
prOject themes
Multifunctional Nanocomposites for Combined Electric and Mechani-cal ContactsWedevelopnovelcoatingmaterialsforelectricalcontactapplica-tions.ThenanocompositeMaxPhasecoatingmaterialsreplacegoldinelectricalcontacts.Theyaretough,electricallyconduct-ing,resistanttocorrosionandwear,cheap,andenvironmentallyfriendly–trulymultifunctionalmaterials.
Photo: Impact Coatings AB
re
se
ar
ch
ce
nt
er
s
IFM actIvIty report 2012 79
Self-Organizing Nanoscale Coatings for Cutting Tools and ComponentsFunMatgeneratesstrategicknowledgeforthedepositionandstructureevolutionofnewhardcoatingsusedinwearprotec-tionofmetalmachiningtools.Thenextgenerationoftoolsmustwithstandyethighermechanicalandthermalloadsthanthoseoftoday.Weexplorenanostructuredceramiccoatingsandpushthefrontiersofcharacterizationtechniquesaswellascomputationalmethods.
Photo: Sandvik Coromant AB
HiPIMS Key Technology Platform for Cutting Tools and Low-friction ComponentsWeexplorehybridHiPIMSTechnologyforadvancedsurfaceengineering.Targetapplicationsarefortransitionmetalnitridesandresilientfullerene-likeC-basedcoatings.Wealsodevelopcoating/substrateadhesionprocessing.ExpertiseisprovidedonPVDdeposition,plasmacharacterization,XPS,electronmicros-copy,nanotribology,aswellastheoreticalcalculations.
Photo: Hysitron Inc.
New Nanoscale Sensor Materials & ApplicationSiliconcarbidechemicalsensorsarecommercializedforap-plicationsinharshenvironmentattemperaturesbelow400°C.Applicationsathighertemperaturesrequireimprovedcontactmaterials.TheconductingceramicmaterialsdevelopedwithinFunMatoffersauniquepossibilityforthesiliconcarbidesensorsaswellasotherchallengingsensordevelopments.GrapheneeptitaxiallygrownonSiCisdevelopedasanultrasensitivegassensorforclosetoroomtemperatureoperation.
Photo: Single layer graphene sensor on semi-insulating SiC
highlights 2012• JohannaRosénappointedWallenbergAcademyFellow• Twospin-outcompanies(GraphenSiCand• N-works)• FourPhDtheses(DoctorsnowworkingatSeco,LiU,SandvikandOerlikonBalzers)
• FivenewPhDstudents(incl.oneVR-industryPhDstudentwithFunMatpartnerSandvik)
• Patentprogressincl.issuedUS8,157,446B2”Cageforarollerbearing...”withSKFABandissuedUS8,216,702B2”Coatedcuttingtool..”withSecoTools
• DrGaliaPozinawinneroftheIVA–RoyalSwedishAcademyofEngineeringSciences”Mentor4Research”Prize–acatlystforcommercialization
• DrNaureenGhafoorandDrPerEklundappointedSeniorLecturers
• ProfLarsHultmanwinneroftheJunior• FacultyPrize2012atLiUforsupportingthecareersofjuniorresearchers,thuscreatingasustainableresearchenviron-ment
• 30scientificpublicationsininternationalpeer-reviewedjournals
• Expansionofstrategicresearchinfrastructure• Industry–Universitymobilityandjobplacements
Center Board Stage 3 (2012-2014)LennartKarlsson,SECOToolsAB(chair)BirgitJacobson,CEI-EuropeAB(deputychair)AnnWGrant,VolvoTechnologyWilliamSalaneck,LiUPeterVärbrand,LiUÅkeÖberg,ABBAB
Management TeamProf.LarsHultman(Head)Prof.AnitaLloydSpetz(DeputyHead)Prof.MagnusOdén(ResearchCoordinator)Ms.ThereseDannetun(Coordinator)Prof.emeritaRositzaYakimova(Adviser)SeniorlecturerPerEklund(leaderTheme1)
Partner Companies Stage 3 (2012-2014)ABBAB,CorporateResearchAlstomPowerCemeConAGFordMotorCompanyImpactCoatingsABIonbondSwedenABSandvikToolingSverigeAB
re
se
ar
ch
ce
nt
er
s
80 IFM actIvIty report 2012
SECOToolsABSenSiCABSKFERCVolvoTechnology
Senior ResearchersMikeAnderssonRobertBjorklundEstebanBroitmanVanyaDarakchievaNaureenGhafoorGrzegorzGreczynskiGueorguiGueorguievHansHögbergAneliaKakanakovaJunLuPerPerssonGaliaPozinaJohannaRosén
Research EngineersKarl-OlofBrolin(untilNov-12)ThomasLingefeltPeterMöller
PhD studentsKonstantinosBakoglidisZhafiraDarmastutiHosseinFahandiDavidEngbergAndersEriksson(PhDJanuary-13)LarsJohnson(PhDOct-12)NilsNedfors(atUppsalaUniversity)LinaRogström(PhDMarch-12)SusannSchmidtBilalSyedOlofTengstrandJenniferUllbrandJianqiangZhu
Post-docsAxelFlinkRuthPearce(untilFebr-12)LinaRogström(fromJune-12)
University collaborationsProf.UlfJansson,UppsalaUniversity
LiLi-NFMLinköpingLinnaeusInitiativeforNovelFunctionalMaterials
LiLi-NFMisacoordinatedlaboratoryforinterdisciplinaryresearchonadvancedmaterials.ItissupportedbytheSwedishResearchCouncil(VR)fora10-yearperioduntil2016byaLin-naeusGrant. Theresearchenvironmentconstitutesthebackboneofmateri-alsresearchatLinköping.Itconsistsof~150researchersfrom9divisionsofIFM.
Director:Prof.LarsHultmanDeputy Director:Prof.ErikJanzénScientific Secretary:Prof.IrinaYakimenkoCoordinator:Ms.CamillaKarlssonResearch Divisions and Principal Investigators:ComputationalPhysics Prof.SvenStafströmFunctionalElectronic Prof.WeiminChenMaterials Prof.IrinaBuyanovaNanostructuredMaterials Prof.MagnusOdénPlasma&CoatingPhys. Prof.UlfHelmersson Prof.NilsBrenningSemiconductorMaterials Prof.ErikJanzén Prof.PederBergman Prof.Per-OlofHoltz Prof.LeifJohansson Prof.BoMonemar Prof.RositzaYakimovaSurface&Semiconductor Prof.GöranHansson,Physics Prof.Wei-XinNi Prof.RogerUhrbergSurfacePhysicsandChemistry Prof.MatsFahlmanTheoryandModelling Prof.IgorAbrikosov Prof.SergeiSimak Prof.IrinaYakimenkoThinFilmPhysics Prof.LarsHultman Prof.JensBirch Prof.EstebanBroitman Prof.AnneHenry Prof.JosephEGreene Prof.IvanPetrov Prof.MichelBarsoum
OBjectiveOurobjectiveisindoingbasicresearchtofundamentallyunder-standtheatomisticnatureofmaterialssynthesis,structure,andproperties. Wecanthusextendthefrontiersofmaterialsandnanosciencestoexpandthescientificfoundationsforthedevel-opmentofmaterialsthatimprove,e.g.,theefficiency,environ-mentalacceptabilityandsafetyinenergygeneration,conversion,transmissionanduse. ThecoreactivityofLiLi-NFMiswithinthelargestandmostrapidlydevelopingareaofphysicsresearchworldwide.Infact,theunderstandingofmaterialsisthefundamentaldrivingforceinnaturalscienceandbasicengineeringresearch.Wefocusonstudiesonthenatureofepilayers,thinfilms,andnanoscalematerials.Here,weareintheforefrontregardingmaterialssyn-thesisincludingwide-bandgapmaterials(SiC,BN,AlN,GaN,ZnO),graphene,nanocomposites,superlattices,fullerene-likecompounds,andorganicmolecularmaterials.
re
se
ar
ch
ce
nt
er
s
IFM actIvIty report 2012 81
Ourresearchconcernsunsurpassedknowledge-baseddesignofnewfunctionalmaterialsforelectronics,engineering,andthelifesciences.Wedesignmaterialstructuresandexploreout-standingphenomena.Wealsoseektodiscovernovelphases.
graphene flagshipLinköpingUniversityistakingpartintheGrapheneFlagshipramp-upstage,whichisfundedbyECwithintheFP7.Thedecisionoffundingisopeningforthegrapheneresearchersnewhorizonstobringthisamazingmaterialtorevolutionarysolutionsinhighspeedelectronics,medicaldiagnostics,spaceresearch,etc. ResearchersatIFMhavetheknowhowtoproduceoneofthebestgrapheneonsiliconcarbideworldwide.InNovember2011thefirstEuropeancompanyonepitaxialgraphene(GraphensicAB)wasfoundedasaspinofffromLiU. OneofthegoalsoftheGrapheneFlagshipistobridgeresearchandcommercializationbycreatingnewandimprovedgrapheneproductstobeimplementedinadvancedapplications,whichwillbringaddedvaluetothesociety.
strategyItisourstrategyforexcellencetodevelopandintegratetheory,simulations,andexperiment.ThephilosophyforoperatingLiLi-NFMcontainsthefollowingelements:• Naturalscienceandbasicengineeringresearch• Strategicrecruitmentsandtenure-trackplans• Intra-disciplinaryexcellence• Inter-andmulti-disciplinarymodusoperandi• Strongnational&internationalcollaboration• State-of-the-artlaboratories• Leadingcomputationalcapacity• Synergyandaddedvaluefromcollaboration
cOmpetence platfOrmsLiLi-NFMsupportsthefollowingcompetenceplatformsaroundwhichseveralprofileprojectsareoperated:1. MaterialsSynthesis;2. MaterialsModeling;3. AdvancedMaterialsAnalysis
recent strategic recrUitments• OlleKordina• PerEklund• JensJensen• MathieuLinares• DanielDagnelund• MartinMagnuson• WeineOlovsson• HenrikPedersen• IrisPilch• FredrikSöderlind• DanielSöderström• JanStehr
lili-nfm seminars seriesWeorganizeopenseminars.In2012presentationsweregivenbyDr.R.Armiento,Dr.M.Magnuson,Dr.J.Jensen,Dr.V.Chirita(allIFM),andDr.V.R.R.Medicherla(InstituteofTechnicalEdu-cationandResearch,Bhubaneswar,India).
scientific highlightsExperimentalandTheoreticalEvidenceofaHighlyOrderedTwo-DimensionalSn/AgAlloyonSi(111)[JacekR.Osienski,H.M.Sohail,P.E.J.Eriksson,andR.I.G.Uhrberg,Phys.Rev.Lett.109,057601(2012)].
Theexistenceofahighlyordered,two-dimensional,Sn/AgalloyonSi(111)isreportedinthisstudy.Wepresentdetailedatomicandelectronicstructuresoftheoneatomiclayerthickalloy,exhibitinga2x2periodicity.Theelectronicstructureisme-tallicduetoafree-electron-likesurfacebanddispersingacrosstheFermilevel.Byelectrondoping,theelectronicstructurecanbeconvertedintoasemiconductingstate.ArotatedSntrimerconstitutesthekeystructuralelementthatcouldbeidentifiedbyadetailedanalysisofconstantenergycontoursderivedfromthefree-electron-likeband.
Figure 1: Constant energy contours (up) and electronic band structure (bot-tom) of the 2D Sn/Ag alloy. In combination with a theoretical study, these data revealad the existence of rotated Sn trimmers.
Antiferromagnetic interaction in coupled CdSe/ZnMnSe quantum dot structures [D. Dagnelund, Q. J. Ren, I. A. Buyanova, A. Murayama, and W. M. Chen, Appl. Phys. Lett. 101, 052405 (2012).]
SpinpolarizationofnonmagneticCdSequantumdots(QDs)coupledtoadjacentZnMnSedilutedmagneticsemiconductor(DMS)isinvestigatedbyCWandtime-resolvedmagneto-opticalspectroscopyundertunablelaserexcitation.Efficientenhance-mentinthedegreeofσ−circularpolarizationofphotolumines-cencefromtheCdSeQDsisobservedunderopticalexcitationattheσ+-activeexcitonstateoftheDMS.Thefactthattheenhance-mentpersistsmuchlongerthantheexcitonlifetimeoftheDMSrulesoutaroleoftheDMSexcitons.ApossibleexplanationisdiscussedintermsofantiferromagneticcouplingbetweentheexcitonsinQDsandalignedMnionsinDMS.
re
se
ar
ch
ce
nt
er
s
82 IFM actIvIty report 2012
Figure 2: (a) Schematic picture of the studied structures along with an STEM image displaying a close-up of the CdSe QD layer. The bright and dark areas correspond to Cd-and Zn-rich regions, respectively. (c)-(e) Profile of Mn and Cd content across the structure with the 2 nm wide ZnSe barrier. (b) Sche-matic drawing of the structure aligned with (c)-(e).
Size-ControlledGrowthofNanoparticlesinaHighlyIonizedPulsedPlasma[I.Pilch,D.Söderström,N.Brenning,andU.Helmersson,Appl.Phys.Lett.,102,033108(2013)].Nanoparticlesinasizerangeof10to40nmweresynthesizedusingahighpowerpulsedhollowcathode.Itwasshownthatthesizeofthenanoparticlescouldbecontrolledbythepulseparameters,i.e.,frequency,peakcurrentandpulsewidth.Byapplyingahighpowerpulsetoahollowcathode,ahighdegreeofionizationofthesputteredsourcematerialisachieved.Thegrowthprocessofnanoparticlesinapulsed,highlyionizedplasmaisdiscussed,andunderlyingmechanismsforcontrollingthegrowthprocessareproposed.
Figure 3: Nanoparticle diameter vs. the pulse frequency for constant energy per pulse (□) and constant average power (∆). Inset: Example of a size distri-bution with corresponding fit.
Benzene,coronene,andcircumcoroneneadsorbedongold,andagoldclusteradsorbedongraphene:Structuralandelectronicproperties[PauloV.C.Medeiros,G.K.Gueorguiev,S.Stafström,Phys.Rev.B85,205423(2012)].
Densityfunctionaltheory(DFT)calculationswereperformed
inordertoinvestigatethestabilityandtheelectronicstructureofgraphene-goldinterfaces.Twoconfigurationswerestudied:anAuclusterinteractingwithgrapheneanddifferentpolycy-clicaromatichydrocarbon(PAH)molecules,namely,C6H6(benzene),C24H12(coronene),andC54H18(circumcoronene)adsorbedonAu(111).NonlocalinteractionswereaccountedforbyusingthesemiempiricalDFT-D2methodofGrimme.Alimitedsetofcalculationswerealsoperformedbyusingthefirst-principlesvanderWaalsdensityfunctionalmethod(vdW-DF).Adsorptiondistancesaround3Åandelectronicchargetransfervaluesofabout(3–13)×10−3e−perCatomwerepredictedforallsystems.NomajorchangesresultingfromtheadsorptionoftheAuclusterweredetectedinthegraphene’sdensityofstates.TheDFT-D2resultsinvolvingtheadsorptionofthePAHmoleculesonAushowanestimatedbindingenergyof73meVperCatom,aswellasanelectronicchargelossof0.10×10−2e−perCatom,foranextendedgraphenesheetadsorbedonaAusurface.ThemodelingoftheadsorptionofC6H6moleculeonaAusurfacesuggeststhatthevdW-DFmethodprovidesmoreaccurateresultsforthebindingenergiesofsuchsystems,incomparisontopureDFTcalculations,whichdonottakethenonlocalinteractionsintoaccount,aswellastosimulationsemployingtheDFT-D2method.
Figure 4: Top panel: Atomic configurations at equilibrium for the model systems C6H6-Au(111) (a), C24H12-Au(111) top (b) and side (c) views, and C54H18-Au(111) (d); Bottom panel: Electronic charge transfer per carbon atom (ΔQ/NH) from the carbon components to the gold components of the model systems, plotted as a function of the NH/NC ratio for the Au49-graphene, C6H6-Au(111), C24H12-Au(111), and C54H18-Au(111) model systems.
re
se
ar
ch
ce
nt
er
s
IFM actIvIty report 2012 83
EffectofpointdefectsontheelectronicdensityofstatesofScNstudiedbyfirst-principlescalculationsandimplicationsforther-moelectricproperties[S.Kerdsongpanya,B.Alling,P.Eklund,Phys.Rev.B86,195140(2012)].
WehavediscoveredananomalouslyhighthermoelectricpowerfactorinepitaxialScNthinfilms,suggestingScN-basedmateri-alsascandidatesforthermoelectricapplication.Ourtheoreti-calstudiesdemonstratedthatthisisduetothedefectstatesintroducingsharpfeaturesintheelectronicdensityofstates,whichwouldyieldalargeenhancementinSeebeckcoefficientwithoutreductioninelectricalconductivity.ScandNvacanciesproduceanasymmetricsharpfeatureinDOSofScN.TheotherdefectswillmovethepositionoftheFermilevel(EF)dependingonwhethertheyaredonorsoracceptors,forexampleO,F,andZractasdonorsandC,Be,andMgactasacceptor.Ourresultsindicateapromisingpathwaytoobtainhighthermoelectricfig-ureofmeritinScN-basedmaterialsbystoichiometrytuningandreductionoflatticethermalconductivity.
Figure 5: Thermoelectric power factor of ScN compared to established ther-moelectric materials
ChargeRedistributionMechanismsofCeriaReduction[O.Hell-man,N.V.Skorodumova,andS.I.Simak,Phys.Rev.Lett.108,135504(2012)].
Ceriaisacorematerialofmanymodernenvironmentallyfriendlytechnologies,whichrelyonitsexcellentredoxproper-ties.Theefficiencyoftheoxygenvacancycreationandannihila-tioninceriacanbecontrolledbyexternalparameters,suchasoxygenpressureandtemperature,andmodifiedbyappropriatedoping.Unfortunately,onlyconcentrationsofoxygenvacan-ciesexceeding1.5at.%areaccessibleinstandardfirst-principlescalculationsduetoprohibitivecomputationalcostforverylargesupercells.Inthepresentworkwehaveproposedamodeltoapproachthedilutelimitintheframeworkofthefirst-principlesdensityfunctionaltheory.Ourmodelallowsonetoreproducethecharacteristicexperimentallyobservedbehaviorofcompositionversusoxygenpressuredependency.Wehaveshownthatinthedilutelimitthechargeredistributionislikelytobedrivenbyamechanismdifferentfromtheusualoneinvolvingelectronlo-calizationonceriumatoms.Itcaninvolvechargelocalizationonlightelementimpurities.Inparticular,naturalimpurities,likecarbonandnitrogen,areabletoactascatalystsjump-startingtheprocessyieldingtheredoxpropertiesofceria(seeFigure6).
Figure 6: Electronic density of states for partially reduced ceria. Top is ceria with no impurities, middle is ceria with a carbon atom occupying an oxygen site and bottom has a nitrogen atom on an oxygen site. In all panels the upper half represents spin up and the lower half spin down DOS.
Electronic-structureoriginoftheanisotropicthermopowerofna-nolaminatedTi3SiC2determinedbypolarizedx-rayspectroscopyandSeebeckmeasurement[M.Magnuson,M.Mattesini,NgoVanNong,P.EklundandL.Hultman,Phys.Rev.B85,195134(2012)].
TheoriginoftheanisotropicSeebeckcoefficient(thermoelectriceffect)innanolaminatedcrystalsistracedtoanisotropiesinelement-specificelectronicstatesbyemployingpolarizedangle-dependentx-rayspectroscopy.Theseresultsconstituteexperi-mentalevidenceexplainingwhytheaverageSeebeckcoefficientofTi3SiC2inpolycrystalsisnegligibleoverawidetemperaturerange.
Figure 7: Calculated and measured Seebeck coefficients of Ti3SiC2. (a) Sxx calculation [L. Chaput, G. Hug, P. Pecheur, and H. Scherrer, Phys. Rev. B 71, 121104 (2005).], (b) Sxx measurement (present work), (c) polycrystal Ti3SiC2 [H.-I. Yoo, M. W. Barsoum, and T. El-Raghy, Nature (London) 407, 581 (2010)].
re
se
ar
ch
ce
nt
er
s
84 IFM actIvIty report 2012
Surfacemorphologyeffectsonthelight-controlledwettabilityofZnOnanostructures[V.Khranovskyy,T.Ekblad,R.YakimovaandL.Hultman,Ap-pliedSurfaceScience258,8146(2012)].TheeffectofsurfacemorphologyontheUVlight-controlledwettabilityofZnOnanostructureshasbeenrevealed[1].ThehydrophobicitystateoftheZnOnanostructuresisconvertedtosuperhydrophilicityafterUVirradiationduring~5-30min(Fig.1),wheresmallerZnOfeaturesonthesurfaceyieldafasterhydrophobicity-hydrophilicitytransition.ThisisexplainedbythesemiconductornatureofZnOanditssurfacechemistry.ThefastestandmostprominentwettabilitychangeisobtainedforZnOnanosheaves:thecontactanglechangesfrom124ºto5ºafter~5min.ofirradiation.Sucheffectisexplainedtobeduetothesmall(~30nm)needletipdiameterandtheirhighlydevelopedsurfacearea.TheresultsencouragetheapplicationoftheZnOnanostructures,particularlyfortheeffectivecontrolofmicroornano-fluidmotion,andenablingpatterninghydro-philicity/hydrophobicitywithphotolithography.TheobservedfeaturesofZnOcanalsobeusedforthedesignofmicrodevices,wherethenatureofasurfaceplaysakeyroleonthemediationofproteinadsorptionorcelladhesion.
Figure 8: Change of the contact angle (θ) with time upon UV irradiation for ZnO nanostructures of diverse morphology. The insets are wettability images before irradiation (left) and after 5 min of UV irradiation (right).
Defectsinhexagonal-AlNsheetsbyfirst-principlescalculations[E.F.deAlmeidaJunior,F.deBritoMota,C.M.C.deCastilho,A.Kakanakova-GeorgievaandG.K.Gueorguiev,Eur.Phys.J.B85,48(2012)].Thestructuralandelectronicpropertiesofaninfiniteh-AlNsheetwereaddressedbyDFTcalculationstogetherwiththeimplicationsforitsnetworkofselecteddefects,e.g.,vacancies,anti-sitesaswellasCandSiimpurities.Defectssuchasnitro-genvacanciesandSiimpuritiesleadtoabreakingoftheplanarshapeoftheh-AlNsheetandinsomecasestotheformationofnewbonds.ThedefectssignificantlychangethebandstructureinthevicinityoftheFermilevelincomparisontothebandstructureoftheperfecth-AlN,whichcanbeusedfordeliberatelytailoringtheelectronicpropertiesofindividualh-AlNsheets.
Figure 9: Charge distribution iso-surfaces associated to the spin excess emerging from the SiAl defect incorporated in an h-AlN sheet.
Negative-USystemofCarbonVacancyin4H-SiC[N.T.Son,X.T.Trinh,L.S.Løvlie,B.G.Svensson,K.Kawahara,J.Suda,T.Ki-moto,T.Umeda,J.Isoya,T.Makino,T.Ohshima,andE.Janzén,Phys.Rev.Lett.109,187603(2012)].Usingn-type4H-SiCepilayersirradiatedbylowenergy(250keV)electronswewereabletoobtaintheelectronparamagneticresonance(EPR)signalsofthecarbonvacancy(VC)withoutinterferencefromotherdefectsanddetermineitsenergylevelsandnegative-Uproperties.CombiningEPRanddeep-leveltransientspectroscopy(DLTS),thetwomostcommondefectsinas-grown4H-SiC–theZ1/2lifetime-limitingdefectandtheEH7deepdefect–havebeenidentifiedtoberelatedtothedoubleacceptor(2-|0)andsingledonor(0|+)levelsofVC,respectively.Theresultsclarifythelong-standingissueontheoriginofthelifetimelimitingdefectinbulkSiC.
Figure 10: Scheme of energy levels of VC at the hexagonal (h) and cubic (k) sites determined by photo-EPR and the Z1/2 and EH7 levels determined by DLTS.
re
se
ar
ch
ce
nt
er
s
IFM actIvIty report 2012 85
LBBLinköpingBiosensorsandBioelectronicsCentre(LBB)staffDirector:ProfAnthony(Tony)TurnerProfessors: AnthonyTurnerandFredrikWinquistEmeritus Professor:IngemarLundströmAssociate Professor: EdwinJagerAssistant Professors:WingCheungMak,AshutoshTiwariandValerioBeniPh.D. Students: OnurParlakandMohsenGolabi.Research Fellows:AmyGelmiandHirakPatraVisiting Researchers: DrRaeannGiffordandDrDouglasHolubVisiting Scientists:DrMasoudMehgardi,DrJannoTorop,DrAysuYarman,DrLokmanUzun,Visiting PhD Students:DanielMelling,AlinaSekretaryova,JoseLuiseSebastianAvila,MabelTorrensdelValle,LeilaKashefi,NajmehKarimian,JoseG.MartinezandRoghayedImani.Diploma/Master Students: NirulMasurkar,NamdiNworah,AswathiAntoAnthony,ShaliniNagabooshnam,AristideGanci,InesMoreno,NisarUlKhaliq,JennyOrban,SwapneelDesh-pandeandPrestyMathewMerna.Consultant:DrClaesNylanderManaging Editor:DrAliceTangAdministrative Staff:AnetteAndersson
general infOrmatiOnTheLinköpingBiosensorsandBioelectronicsCentre(LBB)wassetupin2010,withtheaimofbringingtogetherthemanycom-petences,activitiesandresourcesatLiUthatarealreadyworkingon,orcanbringvaluablecontributionsto,thedevelopmentofbiosensors,biosensing,bioelectronicdevicesandrelevantbio-materialsandnanomaterials.ThemissionoftheCentreistoim-provethequalityoflife,healthandtheenvironmentbytheprovi-sionofdistributeddiagnosticsandpersonalisedanalyticaltoolsandtherapies.Itsremitencompassesimplantable,minimally-invasiveandnon-invasivetechniquesthatmaybewearable,usedatthepointofcareormorewidelydistributedinthehomeorenvironment.Diseasemanagementisfocusedoncancer,cardiacdiseases,infectiousdisease,diabetesandcareoftheelderly.TheCentre’sprincipaltoolsarehighlevelresearch,advancedteach-ingandtheorganisationofspecialistconferencesandwork-shops.During2012,theCentreconsolidatedwiththeappoint-mentofanumberofseniors,includingthreeinassociationwiththeIntegrativeCentreforRegenerativeMedicine(IGEN).ItalsoplayedaleadingroleinthemanagementofLinköpingInitiativeinLifeSciences(LIST)andcontributedtothestrategicdirectionofNewToolsforHealth(HNV).TheCentrefurtherreinforceditsroleontheinternationalstageintherapidlyexpandingfieldofbiosensorsbythecreationofseveralkeyinternationalcol-laborations,organisationoftwointernationalworkshopsandseveralmajorconferences.WorkatLBBtodayspansafullrangeofcoretechnologiesincluding:bioimaginganddrugdelivery;bio-inspiredandbio-specificligands;biointerfaces;biomateri-als;biomolecularelectronics;biosensors;chemicaltransducers;pre-clinicaltrials;printingandmicrofabrication;micro-actuators;nanomaterialsandnanostructures;tissuescaffolds;smartma-terialsandnanomaterials;therapeutics;anduserinterfacesandelectronicdesign.
LBB’sseekstoharnessthefundamentalresearchactivitiesandinnovationatLiUtofacilitatethecreationofthenextgenera-tionofbioelectronicdevicesandtosupportthenationalandworldwidedevelopmentofthefield.ItisworkingcloselywithIGEN,headedbyMayGriffith,ACREOABinNorrköpingandtheJointResearchCentreforBiosensorsinSingapore,headedbyBoLiedberg.OtherkeyexternalcollaboratorsareCranfieldUniversity(UK),HelmholtzCentreforEnvironmentalResearch(UFZ)inLeipzig(Germany),HacettepeUniversity(Turkey),ItalianInstituteofTechnologyinPontedera,JiangsuUniversity(China),ManchesterUniversity(UK),NationalInstituteforMa-terialsScienceTsukuba(Japan),PotsdamUniversity(Germany),PrinceofSongklaUniversity(Thailand),UniversityofCalcutta(India),UniversityofFlorence(Italy),UniversityofWollongong(Australia),WuhanInstituteofVirology(China),UniveristatRoviraiVirgili(Spain),ZanjanUniversity(Iran)andanumberofwell-knowncompanies.
BiOsensOr and BiOelectrOnicsLBBishometotheprincipaljournalinthefield,BiosensorsandBioelectronics,publishedbyElsevier.TonyTurneristheEditor-In-Chief,AliceTangistheManagingEditorandIngemarLundströmisanEditor.ThejournalhasthehighestImpactFac-tor(5.602)foraresearchpublicationinthebroadfieldofElec-trochemistry,asdefinedbyISI,andisalsothehighestrankingjournalinSensors.Theteamhandledover3,000submissionsin2012.www.elsevier.com/locate/bios
advanced materials letters (vBri) AshutoshTiwariisEditor-In-ChiefofAdvancedMaterialsLet-ters,publishedbyVBRIPress,andRaeannGiffordisanAssoci-ateEditor.Thejournalseekstopromotestudiesofthestructure,synthesis,characterisationandapplicationofnovelnanomateri-als.http://amlett.org
BOOksTheCentregeneratedthreecomprehensivetextbooksin2012:IntelligentNanomaterials(Eds.Tiwari,A.,Mishra,A.K.,Kob-ayashi,H.andTurner,A.P.F.)Wiley-ScrivenerPublishing,USA.838pp.ISBN978-0-470-93879-9.BiomedicalMaterialsandDiagnosticDevices(Eds.Tiwari,A.,Ramalingam,M.,Kobayashi,H.andTurner,A.P.F.)Wiley-ScrivenerPublishing,USA.ISBN978-1-118-03014-1.IntegratedBiomaterialsforBiomedicalTechnology(Eds.Ra-malingam,M.,Tiwari,A.,Ramakrishna,S.andKobayashi,H.),Wiley,USA,ISBN978-1-1184-2385-1.
the wOrld cOngress On BiOsensOrsLBBorganisedthe22ndAnniversaryWorldCongressonBiosen-sors,inassociationwithElsevier,inCancun,Mexico15-18May2012.TheWorldCongresshostedca.700delegatesfromalloverthewordandisthelargestandmostprestigiousconferenceinthefield.TheCongresswaschairedbyitsfounder,TonyTurner,forthetwelfthtime.SevendelegatesattendedfromtheCentre,presenting2oralpresentationsand5posters.LiUachievedhighvisibilitythankstoitslargeexhibitionstandpromotingtheactivi-tiesoftheCentreanditsclosepartners,NewToolsforHealth(HNV),GraphenSicandACREO.
re
se
ar
ch
ce
nt
er
s
86 IFM actIvIty report 2012
laBel-free technOlOgiesTheCentreorganisedthefirstinternationalconferenceonLabel-freeTechnologies,inconjunctionwiththeUniversityofBonnandElsevier,inAmsterdam,1-3November2012.Theconferencewasco-chairedbyTonyTurnerandEviKostenis(Bonn)andat-tractedover200delegatesand20commercialexhibitions.Thefocuswasonemergingtechniquesfordrugdiscoveryandlifescienceresearch.
internatiOnal wOrkshOpsInadvanceoftheWorldCongressonBiosensorsinCancun,LBBorganisedaone-daySummerSchoolonPrintedBiosen-sorsandElectronics,aimedatprovidinganindepthandtutorialviewofthisspecialisttopic.TheSummerSchoolwassponsoredbyElsevier(Amsterdam)andErkonInc.(USA)andattendedbyaround100delegates.TheSummerSchoolwascoordinatedbyEdwinJagerandChairedbyTonyTurner.
TheSweden-JapanSeminaronNanomaterialsandNanotechnol-ogy(SJS-Nano),10-11September2012,wasatwo-daybi-nationaleventorganisedbyLBB(AshutoshTiwarietal.)incollaborationwithIGEN,LISTandtheInternationalAssociationofAdvancedMaterials(IAAM)atCampusValla.Itfocusedonrecentad-vancesinnanomaterialsandnanotechnologyandpossibilitiesforfurthercollaborationbetweenSwedenandJapan.Itverysuc-cessfullyincorporatedadditionalpresentationsfromcolleaguesinTsukubabyvideolinkonthesecondday.Duringtheevent,HirakPatrawasawardedtheprizeas“BestYoungScientist”fromtheInternationalAssociationofAdvancedMaterials.
cOst actiOnsmp1003: eUrOpean scientific netwOrk fOr artificial mUsclesEdwinJageristhenationalrepresentativeforSwedenonthemanagementcommitteeofthisCOSTaction,chairmanofshorttermscientificmissions(STSM)workinggroupandvice-chair-manofthemedicaldevicesandconferencecommitteeworkinggroups.LiUreceivedtwovisitorsfundedbySTSMgrantsfromthisactionin2012,Dr.JannoTorop(UniversityofTartu,Estonia)andJoséMartinez(UniversityofCartagena,Spain).
cOst/list sympOsiUm 2012IFMhostedaninternationalWorkshopfundedbyCOSTactionTD1003entitledBioinspiredNanotechnologiesforDistributedDiagnostics,26-27April2012,inconjunctionwithLIST.Thesymposiumcomprised18oralpresentationsinterspersedwithdiscussionsandposterpresentations.IngemarLundströmandTonyTurneraretherepresentativesforSwedenforthisactionandLiUhostedDrAysuYarman(PotsdamUniv.,Germany),fundedbyanSTSMgrantfromthisCOSTin2012.
internatiOnal agreementsTheBiosensorsandBioelectronicsCentresignedanErasmusexchangeagreementwiththeUniversityofDundee(UK)for
Mastersstudents.Furthermore,theCentreconsolidateditsexchangeagreementwithCranfieldUniversity(UK)byhost-ingtwoMasterstudentsfortheirfinalresearchprojectin2012.AshutoshTiwarireceivedaJSPS(Japan)BridgeFellowshipin2012for‘Ahighlysensitiveandreproduciblenanobioreactorfortheartificialkidneydevice’andtheCentresignedacollabora-tionagreementwiththeNationalInstituteforMaterialsScience(NIMS)inTsukuba,Japan.
SIMARCSwedishInterdisciplinaryMAgneticResonanceCenter
staff:Director: Prof.WeiminChen
Board:Prof.AndersLund,LinköpingUniv.,ChairProf.WeiminChen,LiTH,LinköpingUniv.Prof.PerHammarström,LiTH,LinköpingUniv.Prof.ErikJanzén,LiTH,LinköpingUniv.Prof.EvaLund,HU,LinköpingUniv.Doc.AnnMagnusson,UppsalaUniv.Prof.BoMonemar,LiTH,LinköpingUniv.Prof.EinarSagstuen,OsloUniv.(Norway)
Senior scientists: Prof.IrinaBuyanova,Prof.UnoCarlsson,Prof.WeiminChen,Ass.Prof.HåkanGustafsson,Prof.PerHam-marström,Prof.ErikJanzén,Prof.emeritusAndersLund,Prof.emeritusEvaLund,Prof.emeritusBoMonemar,Dr.SaraOlsson,Prof.NguyenTienSon
Visiting scientists and post-docs (>1 month): Dr.AlexandrDobrovolsky,Dr.DanielDagnelund,Prof.MikaelLindgren,Prof.GalynaRudko,Dr.JanStehr,Dr.IgorVorona
PhD students:EmelieAdolfsson,AxelIsraelsson,JanBeyer,ShulaChen,StanislavFilippov,MattiasKarlsson,YuttapoomPuttisong,XuanThangTrinh.
Administrative/Technical staff: SusanneAndersson,Anna-KarinStål,ArneEklund
sUmmary Of activities TheresearchactivitiesatSIMARCcoverseveralareasofvari-ousdisciplines,includingmaterialsscience,chemicalphysics,chemistry,radiationphysicsandmedicalscience.Themateri-alsstudiedincludeadvancedsemiconductormaterials,organicmaterialsfordosimetryandbiochemicalmaterials.
re
se
ar
ch
ce
nt
er
s
IFM actIvIty report 2012 87
Importantdefectissuesandrecombinationprocessesinsemi-conductormaterials
Thegoalis,byelectronparamagneticresonance(EPR)andopticallydetectedmagneticresonance(ODMR),toidentifychemicalnatureandgeometricalstructureofdefects,impuri-tiesanddopantsthatareimportantinsemiconductormaterialsandnanostructures.Theactivitiesinthisareaduring2012werefocusedon:(i)Ga(In)NAsandGaNPdilutenitrides;(ii)SiC;and(iii)ZnO.
EPR dosimetryTheaimistoimproveEPRdosimetry(ionisingradiationdosemeasurements)tobeacompetitivedosimetricmethodforap-plicationsinradiationtherapy.Weworkedwithoptimizationofmeasurementprecisionandaccuracyindosemeasurementsbydevelopmentofnewdosimeterread-outprotocolsanddo-simetercalibrationprotocols.Wewerealsosearchingfornewdosimetermaterialswithhighersensitivityandbettertissueequivalencewithrespecttoattenuationandscatteringofion-izingradiation.WearecurrentlyclinicallyevaluatingalithiumformateEPRdosimetersystemfordosimetryinspecialmeas-urementssituationssuchasdosimetryinintensitymodulatedradiationtherapy(IMRT)andbrachytherapywithelectronicsourcesi.e.amicroX-raytube.Furthertherobustdesignandhighstabilityofthedosimeterswereusedforverificationofthewholeradiotherapychain.
Retrospective dosimetry by means of EPR spectroscopyEPRspectroscopymeasurementsofchewinggumsandsweetenerssorbitolandxylitolhavebeenperformedinordertooptimizetheiruseasretrospectivedosimeters.WeparticipatedinaninternationalintercomparisononretrospectivedosimetryofTouchGlassinmobiletelephones.Radicalidentification,transitions,stability,doseresponseandlightdependencehavebeeninvestigated.Retrospectivedosimetryonfingernailshasbeenperformedwithafocusonthepreparationprocedurestoavoidmechanicallyinducedsignals.Firstattemptsweremadeonimagingofthedosedistributionintoothenamelbyimagingofsimplegeometriesofenamelgrainsinparaffinandcarbonatedhydroxyapatite.
Medical applications of EPR imaging (EPRI)ResearchaimingtouseEPRIformedicalapplicationssuchas:(i)imagingofradicaldistributionsinatherosclerosisforabet-terunderstandingoftheroleofreactiveoxygenspecies(ROS)inatherosclerosis;(ii)imagingofradicaldistributionsforexperimentalverificationsofcalculateddosedistributionsinra-diationtherapyofcancer,e.g.narrowbeamdosedistributionsandinterfacedosedistributions;(iii)imagingandspectroscopyofspin-labelledamyloidproteinsinvolvedindegenerativediseases.
Education activitiesWehavealsobeenactivelyinvolvedinundergraduateandgraduateeducation.During2012,thecoursesin“Semiconduc-torTechnology”(TFYA39),“PerspectivesonPhysics”(TFFM12),“ExperimentalPhysics”(TFFM08),“Projectwork”(TGZD20)and“Magneticresonancecharacterizationofdefectsinsemi-conductors”weregiven.
highlightsDefect properties of ZnO nanowires revealed from an ODMR studyODMRcomplementedbyphotoluminescencemeasurements
isusedtoevaluateopticalanddefectpropertiesofZnOnanow-ires(NWs)grownbyrapidthermalchemicalvapordeposition.Bymonitoringvisibleemissions,severalgrown-indefectsarerevealedandattributedtoZnvacancies,shallow(butnoteffec-tivemass)donorandexchange-coupledpairsofZnvacanciesandZninterstitials.Itisalsofoundthattheintensityofthedonor-relatedODMRsignalsissubstantiallylowerintheNWscomparedwiththatinbulkZnO,indicatingthatformationofnativedonorsissuppressedinNWs,whichisbeneficialforachievingp-typeconductivity.[J.E.Stehretal,Nanotechnology24,015701(2013)]
EPR and theoretical studies of Nb in 4H- and 6H-SiCANb-relateddefectinunintentionallyNb-doped4H-and6H-SiCisstudiedbyEPR.Astrongandanisotropichyperfine(hf)interactionwithtwoequivalentSiatomsandamuchweakerhfinteractionwiththethirdSineighborareobserved,show-ingconsiderablespindensityonthreeSineighborsoftheCvacancy.ComparingthehfdataobtainedbyEPRandbyhfcalculationsprovidesfurthersupportfortheidentificationofthedefectastheneutralNb-vacancycomplex,NbSiVC0.TheobservationofonlyoneNb-relatedEPRspectrumin4H-and6H-SiCisinlinewiththeresultfrompreviouscalculationspredictingthattheh-hconfigurationofNbSiVC0ismoresta-blethanothers.[N.T.Sonetal.,J.Appl.Phys.112,083711(2012)]
Fe(III) distribution varies substantially within and between athero-sclerotic plaquesAtheroscleroticplaquesthatareunstablemayruptureandtheresultingthrombosismaycausesubsequentcatastrophiceventssuchasastrokeoramyocardialinfarctiondependingonthepositionoftheatheroscleroticplaque.Thisworkaimstostudyifthevulnerabilityforruptureofcarotidatheroscleroticplaquesisbettercorrelatedtointra-plaqueirondistributionandthereforetothelocalizationofoxidativestress,ratherthantoahighmeanironconcentrationintheplaque.Wefoundlargeintra-plaqueFe(III)variationsinadditiontotheobserva-tionthatplaquesfrompatientswithneurologicalsymptomshadahigherFe(III)concentrationascomparedtoasympto-maticplaquesaswellassignsofcapruptureandincreasedcapmacrophageactivity.[Gustafssonetal.,Magneticresonanceinmedicine,Inpress].
cOllaBOratiOns About30researchgroupsworldwide.
re
se
ar
ch
ce
nt
er
s
88 IFM actIvIty report 2012
Publications2012
scIentIFIc brancH oFapplIed pHysIcsapplIed optIcs IrynaValyukh,SVGreen,CGGranqvist,KGunnarsson,HansArwin,GANiklasson,Ellipsometricallydeterminedopticalpropertiesofnickel-containingtungstenoxidethinfilms:Nanostructureinferredfromeffectivemediumtheory,JournalofAppliedPhysics,2012,(112),4,044308.
SergiyValyukh,V.Chigrinov,H.S.Kwok,HansArwin,Onliquidcrystaldiffractiveopticalelementsutilizinginhomogeneousalignment,OpticsExpress,2012,(20),14,15209-15221.
Other:Ching-LienHsiao,RogerMagnusson,JustinasPalisaitis,PerSandström,SergiyValyukh,PerPersson,LarsHultman,KennethJärrendahl,JensBirch,Curved-latticeepitaxialgrowthofchiralAlInNtwistednanorodsforopticalapplications,2012.
Conference:KennethJärrendahl,JensBirch,RogerMagnusson,Ching-LienHsiao,PerSandström,TorunBerlind,JohanL.I.Gustafson,LiaFernándezdelRío,JanLandin,HansArwin,PolarizationofLightReflectedfromChiralStructures-CalculationsComparedwithMuellerMatrixEllipsometryMeasurementsonNaturalandSyntheticSamples,2012.
Conference:HansArwin,PolarizedreflectionandnanostructureinscarabbeetlesstudiedbyspectroscopicMueller-matrixellipsometry,2012.
Conference:HansArwin,TorunBerlind,JensBirch,LiaFernándezdelRío,JohanGustafson,JanLandin,RogerMagnusson,ChristinaÅkerlind,KennethJärrendahl,PolarizationeffectsinreflectionfromthecuticleofscarabbeetlesstudiedbyspectroscopicMueller-matrixellipsometry,AES2012,AdvancedElectromagneticsSymposium,2012.
Conference:HansArwin,StructuralandopticalpropertiesofchiralnaturalphotonicstructuresdeterminedfromspectroscopicMueller-matrixdata,E-MRS2012FallMeeting,2012.
SauliusTumėnas,VytautasKarpus,KlemensasBertulis,HansArwin,DielectricfunctionandrefractiveindexofGaBixAs1-x(x=0.035,0.052,0.075),PhysicaStatusSolidi.C,Currenttopicsinsolidstatephysics,2012,(9),7,1633-1635.
JohannaOlofsson,MikaelGrehk,TorunBerlind,CeciliaPersson,StaffanJacobson,HåkanEngqvist,Evaluationofsiliconnitrideasawearresistantandresorbablealternativefortotalhipjointreplacement,Biomatter,2012,(2),2,94-102.
HjalmarGranberg,,LudovicCoppel,,MohamedEita,EduardodeMayolo,HansArwin,LarsWågberg,Dynamicsofmoistureinteractionwithpolyelectrolytemultilayerscontainingnanofibrillatedcellulose,NordicPulp&PaperResearchJournal,2012,(27),2,496-499.
Conference:HansArwin,BlaineJohs,KennethJärrendahl,AnalysisofMueller-matrixdatafromchiralstructuresinexoskeletonsofscarabbeetles,2012.
Conference:EloyGuadalupeMuñoz-Pineda,ArturoMendoza-Galván,ReinaAraceliMauricio-Sánchez,JanLandin,KennethJärrendahl,HansArwin,PolarizationpropertiesandstructuralcolorofthescarabbeetleCotinis mutabilis(Mayatl),2012.
Conference:JonasBergqvist,HansArwin,OlleInganäs,Determinationofopticalconstantsandphasetransitiontemperaturesinpolymerfullerenethinfilmsforpolymersolarcells,2012.
Conference:LiaFernándezdelRío,HansArwin,JanLandin,RogerMagnusson,KennethJärrendahl,AMuellerMatrixSpectroscopicEllipsometryStudyofScarabBeetlesoftheChrysinaGenus,2012.
Conference:HansArwin,AnalysisofphotonicstructuresinbeetlesusingMueller-matrixdata,2012.
ArturoMendoza-Galván,KennethJärrendahl,AlexanderDmitriev,T.Pakizeh,MikaelKäll,HansArwin,Fanointerferenceinsupportedgoldnanosandwicheswithweaklycouplednanodisks,OpticsExpress,2012,(20),28,29646-29658.
Conference:JonasBergqvist,KristoferTvingstedt,HansArwin,OlleInganäs,In situreflectanceimagingoforganicthinfilmformationfromsolution,2012.
Conference:JonasBergqvist,HansArwin,OlleInganäs,Insitureflectanceimagingoforganicthinfilmformationfromsolution,2012.
RobertRehammar,FarzanAlavianGhavanini,RogerMagnusson,JariKinaret,PeterEnoksson,HansArwin,EleanorCampbell,ElectromechanicallyTunableCarbonNanofiberPhotonicCrystal,Nanoletters(Print),2012.
Conference:SergiyValyukh,HansArwin,KennethJärrendahl,LightScatteringandColourGenerationinexoskeletonsofJewelledBeetle,PhotonicsGlobalConference,2012.
Conference:SergiyValyukh,PavloTytarenko,Liquid-crystal-baseddiffractiveopticalelements,8thEOSTopicalMeetingonDiffractiveOptics2012,2012.
Conference:SergiyValyukh,Adaptiveliquidcrystallensesfordisplayapplications,SID-MESpringMeeting2012,2012.
Conference:SergiyValyukh,HansArwin,ChristinaÅkerlind,KennethJärrendahl,Simulationoflightscatteringfrombiologicalhelicoidalstructures,7thWorkshopEllipsometry,2012.
Conference:SergiyValyukh,JelleDeSmet,HerbertDeSmet,OleksandrSlobodyanyuk,ALiquidCrystalLensArray-BasedProjectionSystemforNearEyeDisplays,The19thInternationalDisplayWorkshopsinconjunctionwithAsiaDisplay,2012.
Conference:SergiyValyukh,Diffractiveopticalelementsbasedonliquidcrystals,4thWorkshoponLiquidCrystalsforPhotonics,2012.
HansArwin,RogerMagnusson,JanLandin,KennethJärrendahl,Chirality-inducedpolarizationeffectsinthecuticleofscarabbeetles:100yearsafterMichelson,PhilosophicalMagazine,2012,(92),12,1583-1599.
applIed pHysIcs Other:ZafarIqbal,MatsEriksson,Opticalsensingwithamobilephoneappliedtoliquidsolutions,2012.
Other:ZafarIqbal,MatsEriksson,Classificationandquantitativeopticalanalysisofliquidandsolidsamplesusingamobilephoneasilluminationsourceanddetector,2012.
DanielABricarello,MiraAPatel,AtulNavinchandraParikh,Inhibitinghost-pathogeninteractionsusingmembrane-basednanostructures,TrendsinBiotechnology,2012,(30),6,323-330.
FrancescaDini,EugenioMartinelli,RobertoPaolesse,DanielFilippini,DetlevSchild,IngemarLundström,CorradoDiNatale,Dataprocessingforimage-basedchemicalsensors:unsupervisedregionofinterestselectionandbackgroundnoisecompensation,AnalyticalandBioanalyticalChemistry,2012,(402),2,823-832.
Lic:ZhafiraDarmastuti,SiCFETgassensors:theory,developent,andapplicationstofluegascleaningprocessesinpowerplants,2012.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 89
pU
Bli
ca
tiO
ns
& t
he
se
s
ChristianUlrich,DanLouthander,PerMårtensson,AndréKluftinger,MichaelGawronski,FredrikBjörefors,Evaluationofindustrialcuttingfluidsusingelectrochemicalimpedancespectroscopyandmultivariatedataanalysis,Talanta,2012,(97),468-472.
PakornPreechaburana,AnkeSuska,DanielFilippini,EmbeddedAdaptiveOpticsforUbiquitousLab-on-a-ChipReadoutonIntactCellPhones,Sensors,2012,(12),7,8586-8600.
Other:PakornPreechaburana,PerErlandsson,EvaÅström,PeterPåhlsson,DanielFilippini,NathanielD.Robinson,Disposabletotalinternalreflectionfluorescencelab-on-a-chipformedicaldiagnosis,2012.
PakornPreechaburana,MarcosGonzalez,AnkeSuska,DanielFilippini,SurfacePlasmonResonanceChemicalSensingonCellPhones,Sensors,2012,(51),46,11585-11588.
AnkeSuska,UrbanAlehagen,IngemarLundström,UlfDahlström,SalivaryAlpha-AmylaseActivity,aNewBiomarkerinHeartFailure?,JournalofClinicalandExperimentalCardiology,2012,(S2).
applIed sensor scIence ChristianBur,PeterReimann,MikeAndersson,AnitaLloydSpetz,AndreasSchuetze,NewmethodforselectivityenhancementofSiCfieldeffectgassensorsforquantificationofNO(x),MicrosystemTechnologies,2012,(18),7-8,1015-1025.
RositzaYakimova,LinneaSelegård,VolodymyrKhranovskyy,RuthPearce,AnitaLloydSpetz,KajsaUvdal,ZnOmaterialsandsurfacetailoringforbiosensing,Frontiersinbioscience(Eliteedition),2012,(4),254-278.
JensEriksson,RuthPearce,TihomirIakimov,ChariyaVirojanadara,DanielaGogova,MikeAndersson,MikaelSyväjärvi,AnitaLloydSpetz,RositzaYakimova,TheinfluenceofsubstratemorphologyonthicknessuniformityandunintentionaldopingofepitaxialgrapheneonSiC,AppliedPhysicsLetters,2012,(100),24,241607.
AndreasLarsson,OlavStorstrom,TorleifTollefsenSeip,MagnusHjelstuen,RobertBjorklund,AnitaLloydSpetz,MatsLJohansson,AnnGrant,PeterJozsa,Per-ErikFaegerman,JaskaPaaso,LarsHammarlund,ThermalManagementSystemforParticleSensorsDesign,PerformanceandVerification,IEEESensorsJournal,2012,(12),6,2299-2305.
ChristianBur,PeterReimann,MikeAndersson,AndreasSchuetze,AnitaLloydSpetz,IncreasingtheSelectivityofPt-GateSiCFieldEffectGasSensorsbyDynamicTemperatureModulation,IEEESensorsJournal,2012,(12),6.
KristinaBuchholt,PerEklund,JensJensen,JunLu,RGhandi,MDomeij,CMZetterling,GBehan,HZhang,AnitaLloydSpetz,LarsHultman,GrowthandcharacterizationofepitaxialTi3GeC2thinfilmson4H-SiC(0001),JournalofCrystalGrowth,2012,(343),1,133-137.
AnitaLloydSpetz,Vacuumtechnologyappliedtosolidstatechemicalsensors,processing,characterizationandapp-lications,Vacuum,2012,(86),5,488-494.
Other:ZhafiraDarmastuti,P.Bhattacharyya,MikeAndersson,JayitaKanungo,SukumarBasu,Per-OlovKäll,LarsOjamäe,AnitaLloydSpetz,SiC-FETMethanolSensorsforProcessControlandLeakageDetection,2012.
Conference:RuthPearce,RositsaYakimova,JohanEriksson,LarsHultman,MikeAndersson,AnitaLloydSpetz,DevelopmentofFETsandresistivedevicesbasedonepitaxiallygrownsinglelayergrapheneonSiCforhighlysensitivegasdetection,MaterialsScienceForumVols717-720,2012.
bIoMolecUlar and organIc electronIcs ReneeKroon,RobertGehlhaar,TimothyTSteckler,PatrikHenriksson,ChristianMuller,JonasBergqvist,AfshinHadipour,PaulHeremans,MatsRAndersson,Newquinoxalineandpyridopyrazine-basedpolymersforsolution-processablephotovoltaics,SolarEnergyMaterialsandSolarCells,2012,(105),280-286.
KoenVandewal,ZaifeiMa,JonasBergqvist,ZhengTang,ErgangWang,PatrikHenriksson,KristoferTvingstedt,MatsRAndersson,FenglingZhang,OlleInganäs,QuantificationofQuantumEfficiencyandEnergyLossesinLowBandgapPolymer:FullereneSolarCellswithHighOpen-CircuitVoltage,AdvancedFunctionalMaterials,2012,(22),16,3480-3490.
KoenVandewal,KristoferTvingstedt,OlleInganäs,Polarizationanisotropyofchargetransferabsorptionandemissionofalignedpolymer:fullereneblendfilms,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),3,035212.
Other:RogerHGabrielsson,GrzegorzMilczarewic,D.HNagarajuc,PeterKonradsson,OlleInganäs,HydrogelsofpolypyrroleandselfdopedPEDOTforporouselectrodesandsupercapacitors,2012.
Other:MahiarHamedi,AndersElfwing,RogerHGabrielsson,OlleInganäs,ElectronicPolymersandDNASelf-assembledinNanowireTransistors,2012.
OlleInganäs,FenglingZhang,MatsRAndersson,AlternatingCopolymersandAlternativeDeviceGeometriesforOrganicPhotovoltaics,Ambio,2012,(41),138-142.
NiclasSolin,OlleInganäs,ProteinNanofibrilsBalanceColoursinOrganicWhite-Light-EmittingDiodes,IsraelJournalofChemistry,2012,(52),6,529-539.
HongyuZhen,KanLi,ZhuoyinHuang,ZhengTang,RengmaoWu,GuolongLi,XuLiu,FenglingZhang,Invertedindium-tin-oxide-freecone-shapedpolymersolarcellsforlighttrapping,AppliedPhysicsLetters,2012,(100),21,213901.
ViktorAndersson,CarolineSkoglund,KajsaUvdal,NiclasSolin,Preparationofamyloidlikefibrilscontainingmagneticironoxidenanoparticles:Effectofproteinaggregationonprotonrelaxivity,BiochemicalandBiophysicalResearchCommunications-BBRC,2012,(419),4,682-686.
GrzegorzMilczarek,OlleInganäs,RenewableCathodeMaterialsfromBiopolymer/ConjugatedPolymerInterpenetratingNetworks,Science,2012,(335),6075,1468-1471.
MingWang,CuihongLi,AifengLv,ZhaohuiWang,ZhishanBo,FenglingZhang,Synthesisandphotovoltaicbehaviorsofbenzothiadiazole-andtriphenylamine-basedalternatingcopolymers,Polymer,2012,(53),2,324-332.
ZaifeiMa,ErgangWang,MarkusEJarvid,PatrikHenriksson,OlleInganäs,FenglingZhang,MatsRAndersson,Synthesisandcharacterizationofbenzodithiophene-isoindigopolymersforsolarcells,JournalofMaterialsChemistry,2012,(22),5,2306-2314.
ZhengTang,MattiasAndersson,ZandraGeorge,KoenVandewal,KristoferTvingstedt,PatrikHeriksson,ReneeKroon,MatsAndersson,OlleInganäs,InterlayerforModifiedCathodeinHighlyEfficientInvertedITO-FreeOrganicSolarCells,AdvancedMaterials,2012,(24),4,554-558.
Anna-LenaGöransson,DanielKanmert,K.PeterR.Nilsson,KatarinaKågedal,Ann-ChristinBrorsson,IdentificationofdistinctphysiochemicalpropertiesofthetoxicprefibrillarspeciesformedbyAΒΒ peptidevariants,BiochemicalandBiophysicalResearchCommunications-BBRC,2012,(420),4,895-900.
Ph.D.:ViktorAndersson,Electrontomographyandopticalmodellingfororganicsolarcells,2012.
ViktorAndersson,SergejMasich,NiclasSolin,OlleInganäs,Morphologyoforganicelectronicmaterialsimagedviaelectrontomography,JournalofMicroscopy,2012,(247),3,277-287.
90 IFM actIvIty report 2012
ZaifeiMa,ZhengTang,ErgangWang,MatsRAndersson,OlleInganäs,FenglingZhang,InfluencesofSurfaceRoughnessofZnOElectronTransportLayeronthePhotovoltaicPerformanceofOrganicInvertedSolarCells,TheJournalofPhysicalChemistryC,2012,(116),46,24462-24468.
ZhengTang,ZandraGeorge,ZaifeiMa,JonasBergqvist,KristoferTvingstedt,KoenVandewal,ErgangWang,MattiasAndersson,MatsRAndersson,FenglingZhang,OlleInganäs,Semi-TransparentTandemOrganicSolarCellswith90%InternalQuantumEfficiency,ADVANCEDENERGYMATERIALS,2012,(2),12,1467-1476.
Conference:JonasBergqvist,HansArwin,OlleInganäs,Determinationofopticalconstantsandphasetransitiontemperaturesinpolymerfullerenethinfilmsforpolymersolarcells,2012.
KristoferTvingstedt,ZhengTang,OlleInganäs,Lighttrappingwithtotalinternalreflectionandtransparentelectrodesinorganicphotovoltaicdevices,AppliedPhysicsLetters,2012,(101),16.
BettinaM.Wegenast-Braun,AngelosSkodras,GoncaBayraktar,JasminMahler,SarahK.Fritschi,TheréseKlingstedt,JeffreyMason,PerHammarström,PeterNilsson,ChristianLiebig,MathiasJucker,SpectralDiscriminationofCerebralAmyloidLesionsafterPeripheralApplicationofLuminescentConjugatedOligothiophenes,AmericanJournalofPathology,2012,(181),6,1953-1960.
Conference:JonasBergqvist,KristoferTvingstedt,HansArwin,OlleInganäs,In situreflectanceimagingoforganicthinfilmformationfromsolution,2012.
Conference:JonasBergqvist,HansArwin,OlleInganäs,Insitureflectanceimagingoforganicthinfilmformationfromsolution,2012.
MattiasAndersson,Yu-TeHsu,KoenVandewal,AlexanderBSieval,MatsR.Andersson,OlleInganäs,MixedC60/C70basedfullereneacceptorsinpolymerbulk-heterojunctionsolarcells,Organicelectronics,2012,(13),12,2856-2864.
AlexanderVastesson,AndersElfwing,OlleInganäs,Micro-StructuringofNewMaterialsCombinedwithElectronicPolymersforInterfaceswithCells,2012.
IlanMargalith,CarloSuter,BorisBallmer,PetraSchwarz,CinziaTiberi,TizianaSonati,JeppeFalsig,SofieNyström,PerHammarström,AndreasÅslund,PeterNilsson,AliceYam,EricWhitters,SimoneHornemann,AdrianoAguzzi,PolythiophenesInhibitPrionPropagationbyStabilizingPrionProtein(PrP)Aggregates,JournalofBiologicalChemistry,2012,(287),23,18872-18887.
bIosensors and bIoelectronIcs YashpalSharma,AshutoshTiwari,ShinyaHattori,DohikoTerada,AshokKSharma,MuruganRamalingam,HisatoshiKobayashi,Fabricationofconductingelectrospunnanofibersscaffoldforthree-dimensionalcellsculture,InternationalJournalofBiologicalMacromolecules,2012,(51),4,627-631.
VasilikiFragkou,YiGe,GregSteiner,DomFreeman,NorbertBartetzko,AnthonyTurner,DeterminationoftheRealSurfaceAreaofaScreen-PrintedElectrodebyChronocoulometry,InternationalJournalofElectrochemicalScience,2012,(7),7,6214-6220.
AshutoshTiwari,SwapneelR.Deshpande,HisatoshiKobayashi,AnthonyTurner,Detectionofp53genepointmutationusingsequence-specificmolecularlyimprintedPoPDelectrode,Biosensors&bioelectronics,2012,(35),1,224-229.
Conference:EdwinJager,Actuators,biomedicine,andcell-biology,Volume8340ElectroactivePolymerActuatorsandDevices(EAPAD)2012,2012.
Conference:SilviaTaccola,FrancescoGreco,EdwinJager,VirgilioMattoli,ElectrochemicalactuationoffreestandingPEDOT:PSS/SU8bilayermicroactuators,EuroEAP2012onlineproceedings,2012.
Conference:EdwinJager,BabitaGaihre,GurselAlici,GeoffSpinks,Patterningofpolypyrroletrilayeractuatorsworkinginairformicrorobotics,EuroEAP2012onlineproceedings,2012.
RakshaPDhankar,AnjaliMRahatgaonkar,MukundSChorghade,AshutoshTiwari,Spectralandinvitroantimicrobialpropertiesof2-oxo-4-phenyl-6-styryl-1,2,3,4-tetrahydro-pyrimidine-5-carboxylicacidtransitionmetalcomplexes,SpectrochimicaActaPartA-MolecularandBiomolecularSpectroscopy,2012,(93),348-353.
QAMAl-Khafaji,MHarris,STombelli,SLaschi,AnthonyTurner,MMascini,GMarrazza,AnElectrochemicalImmunoassayforHER2Detection,Electroanalysis,2012,(24),4,735-742.
LarisaLvova,MarcoMastroianni,CorradoDiNatale,IngemarLundström,RobertoPaolesse,TowardsHyphenatedSensorsDevelopment:DesignandApplicationofPorphyrinElectropolymerMaterials,Electroanalysis,2012,(24),4,776-789.
MaellePerfezou,AnthonyTurner,ArbenMerkoci,Cancerdetectionusingnanoparticle-basedsensors,ChemicalSocietyReviews,2012,(41),7,2606-2622.
FrancescaDini,EugenioMartinelli,RobertoPaolesse,DanielFilippini,DetlevSchild,IngemarLundström,CorradoDiNatale,Dataprocessingforimage-basedchemicalsensors:unsupervisedregionofinterestselectionandbackgroundnoisecompensation,AnalyticalandBioanalyticalChemistry,2012,(402),2,823-832.
S.K.Shukla,SwapneelR.Deshpande,SudheeshK.Shukla,AshutoshTiwari,Fabricationofatunableglucosebiosensorbasedonzincoxide/chitosan-graft-poly(vinylalcohol)core-shellnanocomposite,Talanta,2012,(99),283-287.
AshutoshTiwari,Intelligentnanomaterialsforprospectivenanotechnology,AdvancedMaterialsLetters,2012,(3),1,1-1.
DohikoTerada,HisatoshiKobayashi,KunZhang,AshutoshTiwari,ChiakiYoshikawa,NobutakaHanagata,Transientcharge-maskingeffectofappliedvoltageonelectrospinningofpurechitosannanofibersfromaqueoussolutions,ScienceandTechnologyofAdvancedMaterials,2012,(13),1,015003.
S.K.Shukla,AnandBharadvaja,G.K.Parashar,A.P.Mishra,G.C.Dubey,AshutoshTiwari,Fabricationofultra-sensitiveopticalfiberbasedhumiditysensorusingTiO2thinfilm,AdvancedMaterialsLetters,2012,(3),5,365-370.
S.K.Shukla,V.Vamakshi,M.Minakshi,AnandBharadavaja,AparnaShekhar,AshutoshTiwari,Fabricationofelectro-chemicalhumiditysensorbasedonzincoxide/polyanilinenanocomposite,AdvancedMaterialsLetters,2012,(3),5,421-425.
AshutoshTiwari,YashpalSharma,ShinyaHattori,DohikoTerada,AshokK.Sharma,AnthonyP.F.Turner,HisatoshiKobayashi,InfluenceofpolyN-isopropylacrylamide)-CNT-polyanilinethree-dimensionalelectrospunmicrofabricscaffoldsoncellgrowthandviability,Biopolymers,2012,(),.
HenrikHöckerdal,AnthonyTurner,FredrikWinquist,ElectrochemicalMeasurementsofSalivaryAmylaseActivity,2012,(),.
S.Cao,L.Fang,Z.Zhao,YiGe,SergeyPiletsky,AnthonyTurner,HierachicallyStructuredHollowSilicaSpheresforHighEfficiencyImmobilizationofEnzymes,AdvancedFunctionalMaterials,2012,(),.
HeLi,JingHe,SongjunLi,AnthonyTurner,ElectrochemicalimmunosensorwithN-dopedgraphene-modifiedelectrodeforlabel-freedetectionofthebreastcancerbiomarkerCA15-3,BiosensorsandBioelectronics,2012,(43),25-29.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 91
pU
Bli
ca
tiO
ns
& t
he
se
s
AlesandroPoma,AntonioGuerreiro,MichaelJ.Whitcombe,ElenaPiletska,AnthonyTurner,SergeyPiletsky,Solid-PhaseSynthesisofMolecularlyImprintedPolymerNanoparticleswithaReusableTemplate–“PlasticAntibodies”,AdvancedFunctionalMaterials,2012.
AnthonyTurner,Biosensors2012,Bio-sensorsandBioelectronics,2012,(40),1-2.
Chapter:AnthonyTurner,MHarris,STombelli,GMarrazza,Affibodiesasanalternativetoantibodiesinbiosensorsforcancermarkers,BiosensorsforMedicalApplications,2012.
Chapter:AnthonyTurner,SenseandSensor-bility,PublicServiceReview:Europe24,2012.
Chapter:AnthonyTurner,Preface,Biomedi-calmaterialsanddiagnosticdevices,2012.
Conference:AnthonyTurner,SDeshpande,AshutoshTiwari,Label-freenanoimmunosensorfordiagnosisofcardiacinjurybasedonlocalisedsurfaceplasmonresonance,BioinspiredNanotechnologiesforDistributedDiagnostics,2012.
Conference:AnthonyTurner,N.Karimian,AshutoshTiwari,Plastictroponinimmunosensorfordiagnosisofcardiacinjury,BioinspiredNanotechnologiesforDistributedDiagnostics,2012.
Conference:AnthonyTurner,N.Karimian,AshutoshTiwari,ElectropolymerisedMIPsensorforTroponinA,MIP2012,2012.
Conference:AnthonyTurner,OnurParlak,AshutoshTiwari,Towardscholesterolbiosensorsbasedongoldnanoparticle-functionalisedgrapheneoxidebydirectelectrontransfer,Label-freetechnologies,2012.
Conference:AnthonyTurner,Biosensors:SenseandSensibility,TheophillusRedwooodMedalandAwardLecture,2012.
Conference:AnthonyTurner,Nanobiosensors:abottom-upapproachtointegratedbiosensordesign,NanoscaleScienceandTechnology,2012.
Conference:AnthonyTurner,Biosensorsasconsumerproductstosupportpersonalwellbeing,ambientassistedlivingandearlydiseasediagnosis,The22ndAnniversaryWorldcongressonBiosensors,2012.
Chapter:AjayKumarMishra,ShivaniB.Mishra,AshutoshTiwari,Polymers/CompositesBasedIntelligentTransducers,IntelligentNanomaterials,2012,571-584.
Chapter:DebasishMondal,AshutoshTiwari,NanofibersBasedBiomedicalDevices,IntelligentNanomaterials,2012,679-714.
Chapter:DebasishMondal,AshutoshTiwari,ElectrospunNanomatrixforTissueRegeneration,BiomedicalMaterialsandDiagnosticDevices,2012,577-596.
Book:MuruganRamalingam,AshutoshTiwari,SeeramRamakrishna,HisatoshiKobayashi,IntegratedBiomaterialsforBiomedicalTechnology,2012.
Chapter:MuruganRamalingam,AshutoshTiwari,PolymericNanofibersandtheirApplicationsinSensors,IntelligentNanomaterials,2012,801-823.
Chapter:RadheshyamRai,SeemaSharma,AshutoshTiwari,R.P.Singh,ExperimentalTechniques:AnIntroductoryOverview,Synthesis,CharacterizationandApplicationofSmartMaterials,2012,15-30.
Chapter:RadheshyamRai,SeemaSharma,AshutoshTiwari,SynthesisandCharacteri-zationofBi,Fe,AlandSb-ModifiedPLZT,Synthesis,CharacterizationandApplicationofSmartMaterials,2012,31-98.
Chapter:YashpalSharma,AshutoshTiwari,HisatoshiKobayashi,ConductingPolymerCompositesforTissueEngineeringScaffolds,BiomedicalMaterialsandDiagnosticDevices,2012,597-510.
Chapter:ShardaSunaramSanjay,RavindraP.Singh,AshutoshTiwari,AvinashC.Pandey,ModeofGrowthMechanismofNanocrystalUsingBiomolecules,IntelligentNanomaterials,2012,625-648.
Chapter:RavindraP.Singh,Jeong-WooChoi,AshutoshTiwari,AvinashC.Pandey,BiomimeticMaterialstowardApplicationofNanobiodevices,IntelligentNanomaterials,2012,741-782.
Chapter:RavindraP.Singh,Jeong-WooChoi,AshutoshTiwari,AvinashChandPandey,UtilityandPotentialApplicationofNanomaterialsinMedicine,BiomedicalMaterialsandDiagnosticDevices,2012,215-260.
Chapter:RavindraP.Singh,KaushalKumar,RadheyshyamRai,Jeong-WooChoi,AshutoshTiwari,AvinashC.Pandey,Synthesis,CharacterizationofMetal-OxideNanomaterialsforBiosensors,Synthesis,CharacterizationandApplicationofSmartMaterials,2012,225-238.
Chapter:RavindraPratapSingh,AshutoshTiwari,Joeng-WooChoi,AvinashChandraPandey,SmartNanomaterialsforBiosensors,BiochipsandMolecularBioelectronics,SmartNanomaterialsforSensorApplication,2012,3-41.
Chapter:AshutoshTiwari,SmartChitosanMatricesforApplicationtoCholesterolBiosensors,BiotechnologyinBiopolymers,2012,193-232.
Chapter:RaghvendraS.Yadav,RavindraP.Singh,AshutoshTiwari,AvinashC.Pandey,SmartNanomaterialsforSpaceandEnergyApplications,IntelligentNanomaterials,2012,213-250.
Anthology:AshutoshTiwari,AjayK.Mishra,HisatoshiKobayashi,AnthonyP.F.Turner,IntelligentNanomaterials,2012.
Anthology:AshutoshTiwari,MuruganRamalingam,HisatoshiKobayashi,AnthonyP.F.Turner,BiomedicalMaterialsandDiagnosticDevices,2012.
Chapter:AshutoshTiwari,R.P.Singh,RadheshyamRai,VinylsModifiedGuarGumBiodegradablePlastics,Synthesis,CharacterizationandApplicationofSmartMaterials,2012,125-136.
Chapter:AtulTiwari,RaviB.Srivastava,RajeshK.Saini,AnilK.Bajpai,LuciaH.InnocentiniMei,ShivaniB.Mishra,AshutoshTiwari,AshokKumar,MohsenShahinpoor,GolokB.Nando,SubashC.Kundu,AvrathChadha,Biopolymers:AnIndispensableToolforBiotechnology,BiotechnologyinBiopolymers,2012,1-16.
Chapter:AshutoshTiwari,AtulTiwari,BionanocompositeMatricesinElectrochemicalBiosensors,BiomedicalMaterialsandDiagnosticDevices,2012,301-320.
Chapter:AshutoshTiwari,DohikoTerada,HisatoshiKobayashi,R.P.Singh,RadheshyamRai,BionanomaterialsforEmergingBiosensorsTechnology,Synthesis,CharacterizationandApplicationofSmartMaterials,2012,137-154.
Conference:RositsaYakimova,RemigijusVasiliauskas,JensEriksson,MikaelSyväjärvi,Progressin3C-SiCgrowthandnovelapplications,MaterialsScienceForumVol711,2012.
JuankunZhang,YanWu,BinbinZhang,MinLi,ShiruJia,ShuhaiJiang,HaoZhou,YiZhang,ChaozhengZhang,AnthonyTurner,Label-FreeElectrochemicalDetectionOfTetracyclineByAnAptamerNano-Biosensor,AnalyticalLetters,2012,(45),9,986-992.
bIotecHnology MandeniusC,AnderssonT,AlvesCeciliaAndrésen,SaraHelander,AlexanderLemak,ChristopheFares,VeronikaCsizmok,JonasCarlsson,LindaZPenn,JulieDForman-Kay,CherylHArrowsmith,PatrikLundström,MariaSunnerhagen,Transientstructureanddynamicsinthedisorderedc-MyctransactivationdomainaffectBin1binding,NucleicAcidsResearch,2012,(40),13,6353-6366.
92 IFM actIvIty report 2012
PatriciaWennerstrand,PaoloDametto,JanoschHennig,TheréseKlingstedt,KarinSkoglund,MalinLindqvistAppell,Lars-GöranMårtensson,StructuralCharacteristicsDeterminetheCauseoftheLowEnzymeActivityofTwoThiopurineS-MethyltransferaseAllelicVariants:ABiophysicalCharacterizationofTPMT*2andTPMT*5,Biochemistry,2012,(51),30,5912-5920.
AlexandarLHansen,PatrikLundström,AlgirdasVelyvis,LewisEKay,QuantifyingMillisecondExchangeDynamicsinProteinsbyCPMGRelaxationDispersionNMRUsingSide-ChainH-1Probes,JournaloftheAmericanChemicalSociety,2012,(134),6,3178-3189.
SRazaHaq,CelestineNChi,AndersBach,JakobDogan,AkeEngstrom,GretaHultqvist,OAndreasKarlsson,PatrikLundström,LindaCMontemiglio,KristianStromgaard,StefanoGianni,PerJemth,Side-ChainInteractionsFormLateandCooperativelyintheBindingReactionbetweenDisorderedPeptidesandPDZDomains,JournaloftheAmericanChemicalSociety,2012,(134),1,599-605.
AndersBach,BettinaHClausen,MagdaMoller,BenteVestergaard,CelestineNChi,AdamRound,PernilleLSorensen,KlausBNissen,JetteSKastrup,MichaelGajhede,PerJemth,AndersSKristensen,PatrikLundström,KateLLambertsen,KristianStromgaard,Ahigh-affinity,dimericinhibitorofPSD-95bivalentlyinteractswithPDZ1-2andprotectsagainstischemicbraindamage,ProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica,2012,(109),9,3317-3322.
JanetRKumita,LindaHelmfors,JocyWilliams,LeilaMLuheshi,LindaMenzer,MireilleDumoulin,DavidALomas,DamianCCrowther,ChristopherMDobson,Ann-ChristinBrorsson,Disease-relatedamyloidogenicvariantsofhumanlysozymetriggertheunfoldedproteinresponseanddisturbeyedevelopmentinDrosophilamelanogaster,TheFASEBJournal,2012,(26),1,192-202.
Anna-LenaGöransson,DanielKanmert,K.PeterR.Nilsson,KatarinaKågedal,Ann-ChristinBrorsson,IdentificationofdistinctphysiochemicalpropertiesofthetoxicprefibrillarspeciesformedbyAΒpeptidevariants,BiochemicalandBiophysicalResearchCommunications-BBRC,2012,(420),4,895-900.
Lic:Anna-LenaGöransson,TheAlzheimerAΒPeptide:IdentificationofPropertiesDistinctiveforToxicPrefibrillarSpecies,2012.
CelestineN.Chi,S.RazaHaq,SerenaRinaldo,JakobDogan,FrancescaCutruzzolà,ÅkeEngström,StefanoGianni,
PatrikLundström,PerJemth,InteractionsoutsidetheBoundariesoftheCanonicalBindingGrooveofaPDZDomainInfluenceLigandBinding,Biochemistry,2012,(51),44,8971-8979.
Conference:SofieNystrom,ErinNelson,NinaReitan,PalEllingsen,Ann-ChristinBrorsson,JeffreyMason,LeifJohansson,ChananSluzny,SusannHandrick,StefanProkop,BettinaWegenast-Braun,SimoneHornemann,KatarinaKågedal,MikaelLindgren,FrankHeppner,MathiasJucker,AdrianoAguzzi,PeterNilsson,PerHammarström,MonitoringamyloidformationandmaturationinvitroandinvivousingLCOfluorescenceinPRION,vol6,issue,pp13-13,PRION,2012.
Chapter:MikaelAkke,PatrikLundström,ConformationalDynamicsbyRelaxationDispersion,EncyclopediaofBiophysics,2012.
Chapter:RobertGustafsson,AnnicaTheresiaJohnsson,PatrikLundström,Biophysicalcharacterizationofthe*5proteinvariantofhumanthiopurinemethyltransferasebyNMRspectroscopy,2012.
Chapter:PatrikLundström,NuclearOverhausereffect,EncyclopediaofBiophysics,2012.
Chapter:PatrikLundström,AlexandraAhlner,AnnicaT.Blissing,Isotopelabelingmethodsforlargesystems,IsotopelabelinginBiomolecularNMR,2012,3-5.
Chapter:PatrikLundström,AlexandraAhlner,AnnicaT.Blissing,Isotopelabelingmethodsforrelaxationmeasurements,IsotopelabelinginBiomolecularNMR,2012,63-82.
MolecUlar pHysIcs VolodymyrKhranovskyy,TobiasEkblad,RositsaYakimova,LarsHultman,Surfacemorphologyeffectsonthelight-controlledwettabilityofZnOnanostructures,AppliedSurfaceScience,2012,(258),20,8146-8152.
EmilioIAlarcon,KlasUdekwu,MårtenSkog,NataliLPacioni,KevinGStamplecoskie,MariaGonzalez-Bejar,NareshPolisetti,AbeniWickham,AgnetaRichter-Dahlfors,MayGriffith,JuanCScaiano,Thebiocompatibilityandantibacterialpropertiesofcollagen-stabilized,photochemicallypreparedsilvernanoparticles,Biomaterials,2012,(33),19,4947-4956.
LyubaMalysheva,AlexanderOnipko,TimmyFyrner,Hung-HsunLee,RamūnasValiokas,PeterKonradsson,BoLiedberg,SpectroscopicCharacterizationandModelingofMethyl-andHydrogen-TerminatedOligo(ethyleneglycol)Self-AssembledMonolayers,TheJournalof
PhysicalChemistryC,2012,(116),22,12008-12016.
MohammadMehdiShahjamali,MichelBosman,ShaowenCao,XiaoHuang,SomayeSaadat,ErikMartinsson,DanielAili,YeeYanTay,BoLiedberg,SayChyeJoachimLoo,HuaZhang,FreddyBoey,CanXue,GoldCoatingofSilverNanoprisms,AdvancedFunctionalMaterials,2012,(22),4,849-854.
ChristianUlrich,DanLouthander,PerMårtensson,AndréKluftinger,MichaelGawronski,FredrikBjörefors,Evaluationofindustrialcuttingfluidsusingelectrochemicalimpedancespectroscopyandmultivariatedataanalysis,Talanta,2012,(97),468-472.
DanielKanmert,AlfKastbom,GunnelAlmroth,ThomasSkogh,KarinEnander,JonasWetterö,IgGRheumatoidFactorsAgainsttheFourHumanFc-gammaSubclassesinEarlyRheumatoidArthritis(TheSwedishTIRAProject),ScandinavianJournalofImmunology,2012,(75),1,115-119.
TimmyFyrner,KarinMagnusson,PeterNilsson,PerHammarström,DanielAili,PeterKonradsson,Derivatizationofabioorthogonalprotectedtrisaccharidelinker:towardsmultimodaltoolsforchemicalbiology,Bioconjugatechemistry,2012,(23),6,1333-1340.
YusongWang,DanielAili,RobertSelegård,YeeyanTay,LarsBaltzer,HuaZhang,BoLiedberg,SpecificfunctionalizationofCTABstabilizedanisotropicgoldnanoparticleswithpolypeptidesforfolding-mediatedself-assembly,JournalofMaterialsChemistry,2012,(22),38,20368-20373.
MolecUlar sUrFace pHysIcs and nano scIenceMariaAhrén,LinnéaSelegård,FredrikSöderlind,MathieuLinares,JoannaKauczor,PatrickNorman,Per-OlovKäll,KajsaUvdal,Asimplepolyol-freesynthesisroutetoGd2O3nanoparticlesforMRIapplications:anexperimentalandtheoreticalstudy,Journalofnanoparticleresearch,2012,(14),8.
NataliaAbrikossova,CarolineSkoglund,MariaAhrén,TorbjornBengtsson,KajsaUvdal,Effectsofgadoliniumoxidenanoparticlesontheoxidativeburstfromhumanneutrophilgranulocytes,Nanotechnology,2012,(23),27,275101.
RositzaYakimova,LinneaSelegård,VolodymyrKhranovskyy,RuthPearce,AnitaLloydSpetz,KajsaUvdal,ZnOmaterialsandsurfacetailoringforbiosensing,Frontiersinbioscience(Eliteedition),2012,(4),254-278.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 93
pU
Bli
ca
tiO
ns
& t
he
se
s
WenjingWang,QianhuoChen,QingLi,YuSheng,XuanjunZhang,KajsaUvdal,Ligand-StructureEffectontheFormationofOne-DimensionalNanoscaleCu(II)-SchiffBaseComplexesandSolvent-MediatedShapeTransformation,CrystalGrowth&Design,2012,(12),5,2707-2713.
ViktorAndersson,CarolineSkoglund,KajsaUvdal,NiclasSolin,Preparationofamyloidlikefibrilscontainingmagneticironoxidenanoparticles:Effectofproteinaggregationonprotonrelaxivity,BiochemicalandBiophysicalResearchCommunications-BBRC,2012,(419),4,682-686.
CeciliaVahlberg,MathieuLinares,PatrickNorman,KajsaUvdal,PhenylboronicEster-andPhenylboronicAcid-TerminatedAlkanethiolsonGoldSurfaces,TheJournalofPhysicalChemistryC,2012,(116),1,796-806.
Chapter:HelenKarlsson,StefanLjunggren,MariaAhrén,BijarGhafouri,KajsaUvdal,MatsLindahl,AndersLjungman,Two-dimensionalgelelectrophoresisandmassspectrometryinstudiesofnanoparticle-proteininteractions,Gelelectrophoresis-AdvancedTechniques,2012,1-32.
E.Larsson,F.Brun,G.Tromba,P.Cataldi,KajsaUvdal,A.Accardo,QuantificationofStructuralDifferencesintheHumanCalvariumDiploebyMeansofX-rayComputedMicrotomographyImageAnalysis:ACaseStudy,InternationalFederationforMedicalandBiologicalEngineeringProceedings,2012,(37),599-602.
sUrFace pHysIcs and cHeMIstry YiqiangZhan,MatsFahlman,Thestudyoforganicsemiconductor/ferromagnetinterfacesinorganicspintronics:Ashortreviewofrecentprogress,JournalofPolymerSciencePartB,2012,(50),21,1453-1462.
MariaAhrén,LinnéaSelegård,FredrikSöderlind,MathieuLinares,JoannaKauczor,PatrickNorman,Per-OlovKäll,KajsaUvdal,Asimplepolyol-freesynthesisroutetoGd2O3nanoparticlesforMRIapplications:anexperimentalandtheoreticalstudy,Journalofnanoparticleresearch,2012,(14),8.
Ph.D.:ParisaSehati,Influenceofintermolecularorderattheinterfaces,2012.
Other:ParisaSehati,DenizÇakır,GeertBrocks,MatsFahlman,SlawomirBraun,Tuninglowworkfunctioncontactsusingmoleculardonorlayers:intermolecularordereffects,2012.
Other:ParisaSehati,ManipulationofZnOworkfunctionupondepositionof4-TBPmolecule,2012.
Other:ParisaSehati,SlawomirBraun,MatsFahlman,EnergylevelalignmentinAu/Pentacene/PTCDAtrilayerstacks,2012.
NataliaAbrikossova,CarolineSkoglund,MariaAhrén,TorbjornBengtsson,Kajsa
Uvdal,Effectsofgadoliniumoxidenanoparticlesontheoxidativeburstfromhumanneutrophilgranulocytes,Nanotechnology,2012,(23),27,275101.
DenizCakir,MennoBokdam,MichelPdeJong,MatsFahlman,GeertBrocks,Modelingchargetransferatorganicdonor-acceptorsemiconductorinterfaces,AppliedPhysicsLetters,2012,(100),20,203302.
NathanielDRobinson,LudvigEdman,ManishChhowalla,Grapheneelectrodesfororganicmetal-freelight-emittingdevices,PhysicaScripta,2012,(T146),014023.
GeertBrocks,DenizCakir,MennoBokdam,MichelPdeJong,MatsFahlman,Chargeequilibrationandpotentialstepsinorganicsemiconductormultilayers,Organicelectronics,2012,(13),10,1793-1801.
Other:PakornPreechaburana,PerErlandsson,EvaÅström,PeterPåhlsson,DanielFilippini,NathanielD.Robinson,Disposabletotalinternalreflectionfluorescencelab-on-a-chipformedicaldiagnosis,2012.
AntonioBriones-Leon,XianjieLiu,PaolaAyala,HiromichiKataura,KazuhiroYanagi,EugenWeschke,ThomasPichler,HidetsuguShiozawa,Orbitalandspinmagneticmomentsofferroceneencapsulatedinmetallicitysortedsingle-walledcarbonnanotubes,Physicastatussolidi.B,Basicresearch,2012,(249),12,2424-2427.
Chapter:HelenKarlsson,StefanLjunggren,MariaAhrén,BijarGhafouri,KajsaUvdal,MatsLindahl,AndersLjungman,Two-dimensionalgelelectrophoresisandmassspectrometryinstudiesofnanoparticle-proteininteractions,Gelelectrophoresis-AdvancedTechniques,2012,1-32.
sUrFace and seMIcondUctor pHysIcs JacekOsiecki,HafizMuhammadSohail,P.E.J.Eriksson,RogerUhrberg,ExperimentalandTheoreticalEvidenceofaHighlyOrderedTwo-DimensionalSn/AgAlloyonSi(111),PhysicalReviewLetters,2012,(109),5,057601.
HafizMuhammadSohail,JacekOsiecki,RogerUhrberg,Electronicandatomicstructuresofa3x3surfaceformedbyabinarySn/AgoverlayerontheGe(111)c(2x8)surface:ARPES,LEED,andSTMstudies,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),20,205409.
Conference:RuthPearce,RositsaYakimova,JohanEriksson,LarsHultman,MikeAndersson,AnitaLloydSpetz,DevelopmentofFETsandresistivedevicesbasedonepitaxiallygrownsinglelayergrapheneonSiCforhighlysensitivegasdetection,MaterialsScienceForumVols717-720,2012.
scIentIFIc brancH oF bIology
ecology VladimirNovak,NicklasJansson,StefanoChiari,AgneseZauli,PaoloAudisio,GiuseppeM.Carpaneto,AnewspeciesofAllecula(Coleoptera:Tenebrionidae:Alleculinae)fromcorkoakstandsofItaly,Zootaxa,2012,(3483),29-38.
Ph.D.:HåkanLättman,Studiesonspatialandtemporaldistributionsofepiphyticlichens,2012.
HristinaBodin,JesperPersson,HydraulicperformanceofsmallfreewatersurfaceconstructedwetlandstreatingsugarfactoryeffluentinwesternKenya,HYDROLOGYRESEARCH,2012,(43),4,476-488.
Karl-OlofBergman,NicklasJansson,KennethClaesson,MichaelW.Palmer,PerMilberg,Howmuchandatwhatscale?Multiscaleanalysesasdecisionsupportforconservationofsaproxylicoakbeetles,ForestEcologyandManagement,2012,(265),133-141.
ErikOckinger,Karl-OlofBergman,MarkusFranzen,TomasKadlec,JochenKrauss,MikkoKuussaari,JuhaPoyry,HenrikGSmith,IngolfSteffan-Dewenter,RiccardoBommarco,Thelandscapematrixmodifiestheeffectofhabitatfragmentationingrasslandbutterflies,LandscapeEcology,2012,(27),1,121-131.
JefferyL.Walck,LailaM.Karlsson,PerMilberg,SitiN.Hidayati,TetsuyaKondo,Seedgerminationandseedlingdevelopmentecologyinworld-widepopulationsofacircumborealTertiaryrelict,AoBPlants,2012,pls007.
HristinaBodin,JesperPerson,HydraulicperformanceofsmallfreewatersurfaceconstructedwetlandstreatingsugarfactoryeffluentinwesternKenya,HydrologyResearch,2012,(43),4,476-488.
HristinaBodin,AnnaMietto,PerMagnusEhde,JesperPersson,StefanWeisner,Tracerbehaviourandanalysisofhydraulicsinexperimentalfreewatersurfacewetlands,EcologicalEngineering,2012,(49),201-211.
RebeckaLeMoine,Karl-OlofBergman,AndersHargeby,Thelandusecoverchangesfrom1992to2011inKarbiAnglong,Assam,India,2012.
MalinLundberg,AndersHargeby,PeterGustafsson,Karl-OlofBergman,Habitatpreferenserhostjockskaligmålarmussla(Unio crassus)medavseendepåvattendjupochbeskuggning,2012.
94 IFM actIvIty report 2012
SofiaNygårds,Karl-OlofBergman,UnoWennergren,Importanceofhabitatqualityandlandscapefactorsforamonophagousshieldbugonararehostplant,2012.
TomLindström,ScottA.Sisson,NinaHakansson,Karl-OlofBergman,UnoWennergren,AspectralandBayesianapproachforanalysisoffluctuationsandsynchronyinecologicaldatasets,MethodsinEcologyandEvolution,2012,(3),6,1019-1027.
HansArwin,RogerMagnusson,JanLandin,KennethJärrendahl,Chirality-inducedpolarizationeffectsinthecuticleofscarabbeetles:100yearsafterMichelson,PhilosophicalMagazine,2012,(92),12,1583-1599.
DavidA.Adams,JefferyL.Walck,R.StephenHoward,PerMilberg,ForestCompositionandStructureonGlade-formingLimestonesinMiddleTennessee,Castanea,2012,(77),4,335-347.
MolecUlar genetIcs RickyAnsell,Hårfärg,ögonfärgochbiogeografisktursprung,Kriminalteknik,2012,2,18-19.
LinnéaAsplund,MattiLeino,JennyHagenblad,AllelicVariationattheRht8Locusina19thCenturyWheatCollection,TheScientificWorldJournal,2012,385610.
AndersNordgaard,KarinHedberg,ChristinaWidén,RickyAnsell,Commentson‘‘Thedatabasesearchproblem’’withrespecttoarecentpublicationinForensicScienceInternational:LettertotheEditor,ForensicScienceInternational,2012,(217),1-3,e32-e33.
AndersNordgaard,RickyAnsell,WeineDrotz,LarsJaeger,Scaleofconclusionsforthevalueofevidence,Law,ProbabilityandRisk,2012,(11),1,1-24.
JennyHagenblad,JennyZie,MattiW.Leino,Exploringthepopulationgeneticsofgenebankandhistoricallandracevarierties,GeneticResourcesandCropEvolution,2012,(59),6,1185-1199.
AndersNordgaard,RonnyHedell,RickyAnsell,Assessmentofforensicfindingswhenalternativeexplanationshavedifferentlikelihoods—“Blame-the-brother”-syndrome,Science&justice,2012,(52),4,226-236.
MattiW.Leino,E.Boström,JennyHagenblad,Twentieth-centurychangesinthegeneticcompositionofSwedishfieldpeametapopulations,Heredity,2012.
zoologyDACrossley,JordiAltimiras,Effectofselectionforcommerciallyproductivetraitsontheplasticityofcardiovascularregulationinchickenbreedsduringembryonicdevelopment,PoultryScience,2012,(91),10,2628-2636.
MartinJohnsson,IdaGustafsson,Carl-JohanRubin,Anna-StinaSahlqvist,KennethB.Jonnson,SusanneKjere,OlovEkwall,OlleKämpe,LeifAndersson,PerJensen,DominicWright,ASexualOrnamentinChickensIsAffectedbuPleiotropicAllelesatHAO1andBMP2,SelectedduringDomestication,PLOSGenetics,2012,(8),8,e10002914.
NellieLinander,NatalieHemperdeIbarra,MatthiasLaska,OlfactoryDetectabilityofL-AminoAcidsintheEuropeanHoneybee(Apis mellifera),ChemicalSenses,2012,(37),7,631-638.
SelcukCanGüven,MatthiasLaska,OlfactorySensitivityandOdorStructure-ActivityRelationshipsforAliphaticCarboxylicAcidsinCD-1Mice,PLoSONE,2012,(7),3,e34301.
BeatrixAgnvall,MarkusJöngren,ErlingStrandberg,PerJensen,HeritabilityandGeneticCorrelationsofFear-RelatedBehaviourinRedJungelfowl-PossibleImplicationsforEarlyDomestication,PLoSONE,2012,(7),4,e35162.
B.Bagatto,D.CrossleyII,JordiAltimiras,R.M.Elsey,J.W.Hicks,Physiologicalvariabilityinyearlingalligators:Clutchdifferencesatrestandduringactivity,ComparativeBiochemistryandPhysiology-PartA,2012,(PartA),162,44-50.
HelenaWallén,IdaEngström,LauraTeresaHernandezSalazar,MatthiasLaska,Olfactorysensitivityforsixaminoacids:acopmarativestudyinCD-1miceandspidermonkeys,AminoAcids,2012,(42),4,1475-1485.
PiaKatrineLötvetd,SathishKumarMurali,LauraTeresaHernandezSalazar,MatthiasLaska,Olfactorysensitivityfor”greenodors”(AliphaticC6AlcoholsandC6aldehydes)-AcomparativestudyinmaleCD-1mice(Musmusculus)andfemalespidesmonkeys(Ateles geoffroyi),Pharmacology,BiochemistryandBehavior,2012,(101),3,450-457.
DominicWright,CRubin,KSchutz,SKerje,AKindmark,HBrandstrom,LAndersson,TPizzari,PerJensen,OnsetofSexualMaturityinFemaleChickensisGeneticallyLinkedtoLociAssociatedwithFecundityandaSexualOrnament,Reproductionindomesticanimals(1990),2012,(47),SI,31-36.
Ph.D.:AndersWirén,Correlatedselectionresponsesinanimaldomestication:thebehaviouraleffectsofagrowthQTLinchickens,2012.
JosefinArvidsson,MatsAmundin,MatthiasLaska,SuccessfulacquisitionofanolfactorydiscriminationtestbyAsianelephants,Elephas maximus,PhysiologyandBehavior,2012,(105),3,809-814.
DanielNätt,Carl-JohanRubin,DominicWright,MartinJohnsson,JohanBeltéky,LeifAndersson,PerJensen,Heritablegenome-widevariationofgeneexpressionandpromotermethylationbetweenwildanddomesticatedchickens,BMCGenomics,2012,(13),59.
VivianC.Goerlich,DanielNätt,MagnusElfwing,BarryMacdonald,PerJensen,Transgenerationaleffectsofearlyexperienceonacutestressreactionsinbehaviour,steroidhormonesandgeneexpressionintheprecocialchicken,HormonesandBehavior,2012,(61),5,711-718.
FrankW.Albert,MehmetSomel,MiguelCarneiro,AyinuerAximu-Petri,MichaelHalbwax,OlafThalmann,JoseA.Blanco-Aguiar,IrinaZ.Plyusnina,LyudmilaTrut,RafaelVillafuerte,NunoFerrand,SylviaKaiser,PerJensen,SvantePääbo,AComparisonofBrainGeneExpressionLevelsinDomesticatedandWildAnimals,PLOSGenetics,2012,(8),9,e1002962.
Chapter:DominicWright,QTLMappingUsingBehavioraltraitsintheAdultZebrafish,ZebrafishProtocolsforNeurobehavioralResearch,2012,301-312.
scIentIFIc brancH oFcHeMIstry
bIocHeMIstry GroenningM,CamposR,FagerbergPatriciaWennerstrand,PaoloDametto,JanoschHennig,TheréseKlingstedt,KarinSkoglund,MalinLindqvistAppell,Lars-GöranMårtensson,StructuralCharacteristicsDeterminetheCauseoftheLowEnzymeActivityofTwoThiopurineS-MethyltransferaseAllelicVariants:ABiophysicalCharacterizationofTPMT*2andTPMT*5,Biochemistry,2012,(51),30,5912-5920.
HenrikZetterberg,PerHammarström,EditorialMaterial:PowertoolsforAlzheimersdisease-anelectrochemicalpreampforAbeta,JournalofNeurochemistry,2012,(122),2,231-232.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 95
pU
Bli
ca
tiO
ns
& t
he
se
s
SofieNyström,PeterNilsson,PerHammarström,Multiplesubstitutionsofmethionine129inhumanprionproteinrevealitsimportanceintheamyloidfibrillationpathway,JournalofBiologicalChemistry,2012,(287),31,25975-25984.
TheréseKlingstedt,PeterNilsson,Luminescentconjugatedpoly-andoligo-thiophenes:opticalligandsforspectralassignmentofaplethoraofproteinaggregates,BiochemicalSocietyTransactions,2012,(40),704-710.
TimmyFyrner,KarinMagnusson,PeterNilsson,PerHammarström,DanielAili,PeterKonradsson,Derivatizationofabioorthogonalprotectedtrisaccharidelinker:towardsmultimodaltoolsforchemicalbiology,Bioconjugatechemistry,2012,(23),6,1333-1340.
Conference:KarinMagnusson,RozalynSimon,ShivanjaliJoshi-Barr,ChristinaSigurdson,PeterNilsson,Conformation-sensitiveprobesforstrain-specificcharacterizationofprionaggregatesinPRION,vol6,issue,pp47-47,PRION,2012.
KatarzynaMariaPsonka-Antonczyk,JulienDuboisset,BjornTorgerStokke,TamotsuZako,TakahiroKobayashi,MizuoMaeda,SofieNyström,JeffreyMason,PerHammarström,PeterNilsson,MikaelLindgren,NanoscopicandPhotonicUltrastructuralCharacterizationofTwoDistinctInsulinAmyloidStates,INTERNATIONALJOURNALOFMOLECULARSCIENCES,2012,(13),2,1461-1480.
Conference:SofieNystrom,ErinNelson,NinaReitan,PalEllingsen,Ann-ChristinBrorsson,JeffreyMason,LeifJohansson,ChananSluzny,SusannHandrick,StefanProkop,BettinaWegenast-Braun,SimoneHornemann,KatarinaKågedal,MikaelLindgren,FrankHeppner,MathiasJucker,AdrianoAguzzi,PeterNilsson,PerHammarström,MonitoringamyloidformationandmaturationinvitroandinvivousingLCOfluorescenceinPRION,vol6,issue,pp13-13,PRION,2012.
BettinaM.Wegenast-Braun,AngelosSkodras,GoncaBayraktar,JasminMahler,SarahK.Fritschi,TheréseKlingstedt,JeffreyMason,PerHammarström,PeterNilsson,ChristianLiebig,MathiasJucker,SpectralDiscriminationofCerebralAmyloidLesionsafterPeripheralApplicationofLuminescentConjugatedOligothiophenes,AmericanJournalofPathology,2012,(181),6,1953-1960.
IlanMargalith,CarloSuter,BorisBallmer,PetraSchwarz,CinziaTiberi,TizianaSonati,JeppeFalsig,SofieNyström,PerHammarström,AndreasÅslund,PeterNilsson,AliceYam,EricWhitters,
SimoneHornemann,AdrianoAguzzi,PolythiophenesInhibitPrionPropagationbyStabilizingPrionProtein(PrP)Aggregates,JournalofBiologicalChemistry,2012,(287),23,18872-18887.
MolecUlar bIotecHnology CeciliaAndrésen,SaraHelander,AlexanderLemak,ChristopheFares,VeronikaCsizmok,JonasCarlsson,LindaZPenn,JulieDForman-Kay,CherylHArrowsmith,PatrikLundström,MariaSunnerhagen,Transientstructureanddynamicsinthedisorderedc-MyctransactivationdomainaffectBin1binding,NucleicAcidsResearch,2012,(40),13,6353-6366.
PatriciaWennerstrand,PaoloDametto,JanoschHennig,TheréseKlingstedt,KarinSkoglund,MalinLindqvistAppell,Lars-GöranMårtensson,StructuralCharacteristicsDeterminetheCauseoftheLowEnzymeActivityofTwoThiopurineS-MethyltransferaseAllelicVariants:ABiophysicalCharacterizationofTPMT*2andTPMT*5,Biochemistry,2012,(51),30,5912-5920.
AlexandarLHansen,PatrikLundström,AlgirdasVelyvis,LewisEKay,QuantifyingMillisecondExchangeDynamicsinProteinsbyCPMGRelaxationDispersionNMRUsingSide-ChainH-1Probes,JournaloftheAmericanChemicalSociety,2012,(134),6,3178-3189.
SRazaHaq,CelestineNChi,AndersBach,JakobDogan,AkeEngstrom,GretaHultqvist,OAndreasKarlsson,PatrikLundström,LindaCMontemiglio,KristianStromgaard,StefanoGianni,PerJemth,Side-ChainInteractionsFormLateandCooperativelyintheBindingReactionbetweenDisorderedPeptidesandPDZDomains,JournaloftheAmericanChemicalSociety,2012,(134),1,599-605.
AndersBach,BettinaHClausen,MagdaMoller,BenteVestergaard,CelestineNChi,AdamRound,PernilleLSorensen,KlausBNissen,JetteSKastrup,MichaelGajhede,PerJemth,AndersSKristensen,PatrikLundström,KateLLambertsen,KristianStromgaard,Ahigh-affinity,dimericinhibitorofPSD-95bivalentlyinteractswithPDZ1-2andprotectsagainstischemicbraindamage,ProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica,2012,(109),9,3317-3322.
JanetRKumita,LindaHelmfors,JocyWilliams,LeilaMLuheshi,LindaMenzer,MireilleDumoulin,DavidALomas,DamianCCrowther,ChristopherMDobson,Ann-ChristinBrorsson,Disease-relatedamyloidogenicvariantsofhumanlysozymetriggertheunfoldedproteinresponseanddisturbeyedevelopmentinDrosophilamelanogaster,TheFASEBJournal,2012,(26),1,192-202.
Anna-LenaGöransson,DanielKanmert,K.PeterR.Nilsson,KatarinaKågedal,Ann-ChristinBrorsson,IdentificationofdistinctphysiochemicalpropertiesofthetoxicprefibrillarspeciesformedbyAβpeptidevariants,BiochemicalandBiophysicalResearchCommunications-BBRC,2012,(420),4,895-900.
Lic:Anna-LenaGöransson,TheAlzheimerAβPeptide:IdentificationofPropertiesDistinctiveforToxicPrefibrillarSpecies,2012.
CelestineN.Chi,S.RazaHaq,SerenaRinaldo,JakobDogan,FrancescaCutruzzolà,ÅkeEngström,StefanoGianni,PatrikLundström,PerJemth,InteractionsoutsidetheBoundariesoftheCanonicalBindingGrooveofaPDZDomainInfluenceLigandBinding,Biochemistry,2012,(51),44,8971-8979.
Conference:SofieNystrom,ErinNelson,NinaReitan,PalEllingsen,Ann-ChristinBrorsson,JeffreyMason,LeifJohansson,ChananSluzny,SusannHandrick,StefanProkop,BettinaWegenast-Braun,SimoneHornemann,KatarinaKågedal,MikaelLindgren,FrankHeppner,MathiasJucker,AdrianoAguzzi,PeterNilsson,PerHammarström,MonitoringamyloidformationandmaturationinvitroandinvivousingLCOfluorescenceinPRION,vol6,issue,pp13-13,PRION,2012.
Chapter:MikaelAkke,PatrikLundström,ConformationalDynamicsbyRelaxationDispersion,EncyclopediaofBiophysics,2012.
Chapter:RobertGustafsson,AnnicaTheresiaJohnsson,PatrikLundström,Biophysicalcharacterizationofthe*5proteinvariantofhumanthiopurinemethyltransferasebyNMRspectroscopy,2012.
Chapter:PatrikLundström,NuclearOverhausereffect,EncyclopediaofBiophysics,2012,
Chapter:PatrikLundström,AlexandraAhlner,AnnicaT.Blissing,Isotopelabelingmethodsforlargesystems,IsotopelabelinginBiomolecularNMR,2012,3-5.
Chapter:PatrikLundström,AlexandraAhlner,AnnicaT.Blissing,Isotopelabelingmethodsforrelaxationmeasurements,IsotopelabelinginBiomolecularNMR,2012,63-82.
organIc cHeMIstry Other:RogerHGabrielsson,GrzegorzMilczarewic,D.HNagarajuc,PeterKonradsson,OlleInganäs,HydrogelsofpolypyrroleandselfdopedPEDOTforporouselectrodesandsupercapacitors,2012.
96 IFM actIvIty report 2012
Other:MahiarHamedi,AndersElfwing,RogerHGabrielsson,OlleInganäs,ElectronicPolymersandDNASelf-assembledinNanowireTransistors,2012.
LyubaMalysheva,AlexanderOnipko,TimmyFyrner,Hung-HsunLee,RamβnasValiokas,PeterKonradsson,BoLiedberg,SpectroscopicCharacterizationandModelingofMethyl-andHydrogen-TerminatedOligo(ethyleneglycol)Self-AssembledMonolayers,TheJournalofPhysicalChemistryC,2012,(116),22,12008-12016.
Ph.D.:VeronicaSandgren,DesignandSynthesisofInhibitorsTargetingBACE-1,anAsparticProteaseInvolvedinthePathogenesisofAlzheimer’sDisease,2012.
VeronicaSandgren,TatianaAgback,Per-OlaJohansson,JimmyLindberg,IngemarKvarnström,BertilSamuelsson,OscarBelda,AndersDahlgren,HighlypotentmacrocyclicBACE-1inhibitorsincorporatingahydroxyethylaminecore:Design,synthesisandX-raycrystalstructuresofenzymeinhibitorcomplexes,Bioorganic&MedicinalChemistry,2012,(29),14,4377-4389.
InaCeasar(Berg),MariaJonsson,PeterNilsson,StefanThor,PerHammarström,CurcuminPromotesA-betaFibrillationandReducesNeurotoxicityinTransgenicDrosophila,PLoSONE,2012,(7),2.
TamotsuZako,MasafumiSakono,TakahiroKobayashi,KarinSörgjerd,PeterNilsson,PerHammarström,MikaelLindgren,MizuoMaeda,CellInteractionStudyofAmyloidbyUsingLuminescentConjugatedPolythiophene:ImplicationthatAmyloidCytotoxicityIsCorrelatedwithProlongedCellularBinding,ChemBioChem(Print),2012,(13),3,358-363.
SofieNyström,PeterNilsson,PerHammarström,Multiplesubstitutionsofmethionine129inhumanprionproteinrevealitsimportanceintheamyloidfibrillationpathway,JournalofBiologicalChemistry,2012,(287),31,25975-25984.
TheréseKlingstedt,PeterNilsson,Luminescentconjugatedpoly-andoligo-thiophenes:opticalligandsforspectralassignmentofaplethoraofproteinaggregates,BiochemicalSocietyTransactions,2012,(40),704-710.
TimmyFyrner,KarinMagnusson,PeterNilsson,PerHammarström,DanielAili,PeterKonradsson,Derivatizationofabioorthogonalprotectedtrisaccharidelinker:towardsmultimodaltoolsforchemicalbiology,Bioconjugatechemistry,2012,(23),6,1333-1340.
CyrusBett,NataliaFernandez-Borges,TimothyD.Kurt,MelanieLucero,PeterNilsson,JoaquinCastilla,ChristinaJ.Sigurdson,Structureofthebeta2-alpha2loopandinterspeciespriontransmission,TheFASEBJournal,2012,(26),7,2868-2876.
Conference:KarinMagnusson,RozalynSimon,ShivanjaliJoshi-Barr,ChristinaSigurdson,PeterNilsson,Conformation-sensitiveprobesforstrain-specificcharacterizationofprionaggregatesinPRION,vol6,issue,pp47-47,PRION,2012.
KatarzynaMariaPsonka-Antonczyk,JulienDuboisset,BjornTorgerStokke,TamotsuZako,TakahiroKobayashi,MizuoMaeda,SofieNyström,JeffreyMason,PerHammarström,PeterNilsson,MikaelLindgren,NanoscopicandPhotonicUltrastructuralCharacterizationofTwoDistinctInsulinAmyloidStates,INTERNATIONALJOURNALOFMOLECULARSCIENCES,2012,(13),2,1461-1480.
Conference:SofieNystrom,ErinNelson,NinaReitan,PalEllingsen,Ann-ChristinBrorsson,JeffreyMason,LeifJohansson,ChananSluzny,SusannHandrick,StefanProkop,BettinaWegenast-Braun,SimoneHornemann,KatarinaKågedal,MikaelLindgren,FrankHeppner,MathiasJucker,AdrianoAguzzi,PeterNilsson,PerHammarström,MonitoringamyloidformationandmaturationinvitroandinvivousingLCOfluorescenceinPRION,vol6,issue,pp13-13,PRION,2012.
TimmyFyrner,StefanC.T.Svensson,PeterKonradsson,Synthesisoftri-, penta-, and hepta-saccharides,functionalizedwithOrthogonallyN-ProtectedAminoresiduesatthereducingandnon-reducingends,Tetrahedron,2012,(68),33,6712-6720.
SusannaZetterström,PeterKonradsson,StefanSvensson,Isolationandsynthesisofcurcumin,2012.
Ph.D.:RogerGabrielsson,ElectroactiveConjugatedPolyelectrolytesBasedonEDOTFromSynthesistoOrganicElectronics,2012.
IlanMargalith,CarloSuter,BorisBallmer,PetraSchwarz,CinziaTiberi,TizianaSonati,JeppeFalsig,SofieNyström,PerHammarström,AndreasÅslund,PeterNilsson,AliceYam,EricWhitters,SimoneHornemann,AdrianoAguzzi,PolythiophenesInhibitPrionPropagationbyStabilizingPrionProtein(PrP)Aggregates,JournalofBiologicalChemistry,2012,(287),23,18872-18887.
pHysIcal cHeMIstry MariaAhrén,LinnéaSelegård,FredrikSöderlind,MathieuLinares,JoannaKauczor,PatrickNorman,Per-OlovKäll,KajsaUvdal,Asimplepolyol-freesynthesisroutetoGd2O3nanoparticlesforMRIapplications:anexperimentalandtheoreticalstudy,Journalofnanoparticleresearch,2012,(14),8.
MathiasKula,LarsOjamäe,AtheoreticalstudyoftheelectronicstructureofGaNnanorods,InternationalJournalofQuantumChemistry,2012,(112),7,1796-1802.
AnnikaLenz,AnnaPohl,LarsOjamäe,PetterPersson,ComputationalstudyofthecatalyticeffectofplatinumonthedecompositionofDNT,InternationalJournalofQuantumChemistry,2012,(112),7,1852-1858.
Other:ZhafiraDarmastuti,P.Bhattacharyya,MikeAndersson,JayitaKanungo,SukumarBasu,Per-OlovKäll,LarsOjamäe,AnitaLloydSpetz,SiC-FETMethanolSensorsforProcessControlandLeakageDetection,2012.
scIentIFIc brancH oFMaterIal pHysIcs
FUnctIonal electronIc MaterIals Conference:QijunRen,A.Devika,C.W.Tu,WeiminChen,IrinaBuyanova,LocalizedsurfaceplasmonmediatedemissionfromNicoatedZnOnanowires,2012.
G.Yu.Rudko,A.O.Kovalchuk,V.I.Fediv,JanBeyer,WeiminChen,IrinaBuyanova,EffectsofultravioletlightonopticalpropertiesofcolloidalCdSnanoparticlesembeddedinapolymerPVAmatrix,AdvancedScience,EngineeringandMedicine,2012,(4),5,394-400.
Conference:YuttapoomPuttisong,DanielDagnelund,IrinaBuyanova,CharlesW.Tu,A.Polimeni,M.Capizzi,WeiminChen,Optimizationofroom-temperaturedefect-engineeredspinfilteringeffectinGa(In)NAs:rateequationstudies,2012.
Conference:YuttapoomPuttisong,DanielDagnelund,IrinaBuyanova,CharlesW.Tu,A.Polimeni,M.Capizzi,WeiminChen,Effectofpost-growthhydrogentreatmentandannealingonspinfilteringfunctionalityinGa(In)NAsalloys,2012.
Conference:ShulaChen,WeiminChen,IrinaBuyanova,Magneto-opticalspectroscopyofdonorboundexcitonsinvolvingBvalencebandhole,2012.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 97
pU
Bli
ca
tiO
ns
& t
he
se
s
Conference:JanBeyer,P.H.Wang,IrinaBuyanova,S.Suraprapapich,C.W.Tu,WeiminChen,Effectofin-planeanisotropyonspininjectionefficiencyinInAs/GaAsnanostructuresrevealedinalongitudinalmagneticfield,2012.
Conference:StanislavFilippov,X.J.Wang,N.KoteeswaraReddy,C.W.Tu,WeiminChen,IrinaBuyanova,RamanscatteringstudiesofNi-coatedZnOnanorods,2012.
Conference:S.-K.Lee,ShulaChen,D.Hongxing,WeiminChen,IrinaBuyanova,CathodoluminescencecharacterizationofZnOTetrapodstructures,2012.
Conference:JanBeyer,IrinaBuyanova,SSuraprapapich,C.W.Tu,WeiminChen,InAs/GaAsquantumdotsashighlypolarizedspinandlightsourcesandefficientspindetectorsatroomtemperature.,2012.
Conference:QijunRen,WeiminChen,N.KoteeswaraReddy,C.W.Tu,IrinaBuyanova,EffectsofNi-coatingonopticalpropertiesofZnO/Nicore-shellnanowires,2012.
Conference:DanielDagnelund,I.P.Vorona,G.Nosenko,X.J.Wang,C.W.Tu,H.Yonezu,A.Polimeni,M.Capizzi,WeiminChen,IrinaBuyanova,Anopticallydetectedmagneticresonancestudyofeffectsofhydrogenationonnon-radiativedefectsinGaNPandGaNAsalloys,2012.
Conference:DanielDagnelund,YuttapoomPuttisong,H.Yonezu,A.J.Ptak,WeiminChen,IrinaBuyanova,EffectsofsubstratedefectsonphotoluminescenceofGaNPandGaNAsepitaxiallayers:opticallydetectedmagneticresonancestudy,2012.
Conference:YuttapoomPuttisong,IrinaBuyanova,Aaron.J.Ptak,CharlesW.Tu,L.Geelhaar,H.Riechert,WeiminChen,Firstdemonstrationofroom-temperatureelectronspinamplifierbasedonGa(In)NAsalloys,2012.
Conference:JanBeyer,YuttapoomPuttisong,IrinaBuyanova,SSuraprapapich,C.W.Tu,WeiminChen,Hyperfine-inducedspindepolarizationanddynamicnuclearpolarizationinInAs/GaAsquantumdots,2012.
Conference:DanielDagnelund,Q.J.Ren,T.Furuta,K.Hyomi,I.Souma,A.Murayama,WeiminChen,EvidenceforinterlayermagneticcouplingincoupledCdSe/ZnMnSenanostructures,2012.
DanielDagnelund,Q.J.Ren,IrinaBuyanova,A.Murayama,AntiferromagneticcouplinginCdSe/ZnMnSequantumdotstructures,AppliedPhysicsLetters,2012,(101),5,052405.
YuttapoomPuttisong,IrinaBuyanova,LGeelhaar,HRiechert,CWTu,WeiminChen,Efficientroom-temperaturespindetectorbasedonGaNAs,JournalofAppliedPhysics,2012,(111),7,07C303.
Lic:ShulaChen,ExcitoniceffectsinZnO,2012.
Lic:YuttapoomPuttisong,Spin-dependentrecombinationinGa(In)NAsalloys,2012.
XingjunWang,WeiminChen,FRen,SPearton,IrinaBuyanova,EffectsofPimplantationandpost-implantationannealingondefectformationinZnO,JournalofAppliedPhysics,2012,(111),4,043520.
Other:JanBeyer,Po-HsiangWang,IrinaABuyanova,S.Suraprapapich,C.W.Tu,WeiminChen,Quantumdotstructures:limitingfactorsforspintronics,2012.
Ph.D.:JanBeyer,SpinPropertiesinInAs/GaAsQuantumDotbasedNanostructures,2012.
JanBeyer,IrinaBuyanova,SSuraprapapich,C.W.Tu,WeiminChen,HanleeffectandelectronspinpolarizationinInAs/GaAsquantumdotsuptoroomtemperature,Nanotechnology,2012,(23),13,135705.
JanBeyer,YuttapoomPuttisong,IrinaBuyanova,S.Suraprapapich,C.W.Tu,WeiminChen,TemperaturedependenceofdynamicnuclearpolarizationanditseffectonelectronspinrelaxationanddephasinginInAs/GaAsquantumdots,AppliedPhysicsLetters,2012,(100),14,143105.
DanielDagnelund,I.P.Vorona,G.Nosenko,X.J.Wang,C.W.Tu,H.Yonezu,A.Polimeni,M.Capizzi,WeiminChen,IrinaBuyanova,Effectsofhydrogenationonnon-radiativedefectsinGaNPandGaNAsalloys:Anopticallydetectedmagneticresonancestudy,JournalofAppliedPhysics,2012,(111),023501.
Other:JanBeyer,IrinaBuyanova,BoE.Sernelius,SSuraprapapich,C.W.Tu,WeiminChen,StrongsuppressionofspingenerationataFanoresonanceinasemiconductornanostructure,2012.
ShulaChen,WeiminChen,IrinaBuyanova,LongdelaysoflightinZnOcausedbyexciton-polaritonpropagation,Physicastatussolidi.B,Basicresearch,2012,(249),7,1307-1311.
EATveritinova,IIKulakova,YuNZhitnev,AVFionov,AndersLund,WeiminChen,IrinaBuyanova,VVLunin,CatalyticconversionofC(2)-C(3)alcoholsondetonationnanodiamondanditsmodifications,RussianJournalofPhysicalChemistry,2012,(86),1,26-31.
YuttapoomPuttisong,IrinaBuyanova,AaronJ.Ptak,C.W.Tu,LutzGeelhaar,HenningRiechert,WeiminChen,Room-TemperatureElectronSpinAmplifierBaseonGa(In)NAsAlloys,AdvancedMaterials,2012.
Conference:X.J.Wang,WeiminChen,F.Ren,S.Pearton,IrinaBuyanova,Pimplantation–induceddefectsinZnO,2012.
Conference:A.O.Kovalchuk,G.Yu.Rudko,V.I.Fediv,WeiminChen,IrinaBuyanova,NanoparticlesincorporationforimprovementofpolymerendurancetoUV-illumination,11thInternationalConferenceonGlobalResearchandEducation,2012,Inter-Academia,2012.
DanielDagnelund,QijunRen,A.Murayama,WeiminChen,AntiferromagneticinteractionincoupledCdSe/ZnMnSequantumdotstructures,AppliedPhysicsLetters,2012,(101),5,052405-1-052405-5.
ShulaChen,JanEricStehr,N.KoteeswaraReddy,C.W.Tu,WeiminChen,IrinaBuyanova,Efficientupconvertionofphotoluminescenceviatwo-photon-absorptioninbulkandnanorodZnO,Appliedphysics.B,Lasersandoptics(Print),2012,(108),4,919-924.
QijunRen,StanislavFilippov,ShulaChen,M.Devika,N.KoteeswaraReddy,C.W.Tu,WeiminChen,IrinaBuyanova,EvidenceforcouplingbetweenexcitonemissionsandsurfaceplasmoninNi-coatedZnOnanowires,Nanotechnology,2012,(23),42,425201.
X.J.Wang,IrinaBuyanova,WeiminChen,Sub-milliseconddynamicnuclearspinhyperpolarizationinasemiconductor:AcasestudyfromPInantisiteinInP,PhysicalReviewBCondensedMatter,2012,(86),20,205202-1-205202-6.
Conference:ShulaChen,WeiminChen,IrinaBuyanova,Magneto-opticalpropertiesanddynamicsofdonorboundexcitonsinvolvingaBvalencebandhole.,2012.
Conference:ShulaChen,WeiminChen,IrinaBuyanova,RealizationofslowlightinZnOmedia,2012.
Conference:ShulaChen,WeiminChen,C.W.Tu,IrinaBuyanova,EfficientupconversionofphotoluminescenceinbulkandnanorodZnO,2012.
Conference:YuttapoomPuttisong,XingjunWang,IrinaBuyanova,AaronJ.Ptak,CharlesW.Tu,LutzGeelhaar,HenningRiechert,WeiminChen,Defect-enabledRoom-temperatureSpinFunctionalityinGa(In)NAs,2012.
98 IFM actIvIty report 2012
Conference:AlexandrDobrovolsky,ShulaChen,JanStehr,Y.J.Kuang,S.Sukrittanon,H.Li,C.W.Tu,WeiminChen,IrinaBuyanova,OpticalstudiesanddefectpropertiesofGaP/GaNPcore/shellnanowires,2012.
Conference:G.Yu.Rudko,A.O.Kovalchuk,V.I.Fediv,JanBeyer,WeiminChen,IrinaBuyanova,NanocompositespropertiesvariationunderUV-exposure,2012.
Conference:JanStehr,X.J.Wang,F.Ren,S.Pearton,WeiminChen,IrinaBuyanova,DefectsinN,OandN,ZnimplantedZnOsinglecrystals.,2012.
Conference:WeiminChen,IrinaBuyanova,Defect-engineeredspinfunctionalityinanon-magneticsemiconductor.:Invitedtalkatthe3rdNordicWorkshoponSpintronicsandNanomagnetism,VarbergKurort,April22-25,2012.,2012.
ShulaChen,WeiminChen,IrinaBuyanova,ZeemansplittinganddynamicsofanisoelectronicboundexcitonnearthebandedgeofZnO,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),23,.
AlexandrDobrovolsky,JanEricStehr,ShulaChen,Y.J.Kuang,S.Sukrittanon,C.W.Tu,WeiminChen,IrinaBuyanova,MechanismforradiativerecombinationanddefectpropertiesofGaP/GaNPcore/shellnanowires,AppliedPhysicsLetters,2012,(101),16,163106-1-163106-4.
Other:ShulaChen,WeiminChen,IrinaBuyanova,DonorboundexcitonsinvolvingaholefromtheBvalencebandinZnO:Timeresolvedandmagneto-photoluminescencestudies(vol99,091909,2011),2012.
Conference:JanBeyer,YuttapoomPuttisong,P.H.Wang,S.Suraprapapich,C.W.Tu,IrinaBuyanova,WeiminChen,SpinpropertiesinInAs/GaAsquantumdotstructures:InvitedtalkattheSecondInt.Conf.onSmallScience(ICSS2012),Orlando,USA,Dec.16-192012.,2012.
JanEricStehr,D.M.Hofmann,B.K.Meyer,Electronparamagneticresonanceandphoto-electronparamagneticresonanceinvestigationontherechargingofthesubstitutionalnitrogenacceptorinZnO,JournalofAppliedPhysics,2012,(112),10,103511.
WangPo-Hsiang,BeyerJan,ChenWeimin,Magneto-opticalstudiesofopticalspininjectioninInAsquantumdotstructures,2012.
JanBeyer,P.H.Wang,IrinaBuyanova,SSuraprapapich,C.W.Tu,WeiminChen,EffectsofalongitudinalmagneticfieldonspininjectionanddetectioninInAs/GaAsquantumdotstructures,JournalofPhysics,2012,(24),14,145304.
nanostrUctUred MaterIalsHannaGustafsson,EmmaJohannsson,AlbertBarrabino,MagnusOdén,KristerHolmberg,ImmobilizationoflipasefromMucor mieheiandRhizopus oryzaeintomesoporoussilica-Theeffectofvariedparticlesizeandmorphology,ColloidsandSurfacesB,2012,(100),22-30.
Ph.D.:AxelKnutsson,ThermalstabilityandmechanicalpropertiesofTiAlN-basedmultilayerandmonolithiccoatings,2012.
MariaAhrén,LinnéaSelegård,FredrikSöderlind,MathieuLinares,JoannaKauczor,PatrickNorman,Per-OlovKäll,KajsaUvdal,Asimplepolyol-freesynthesisroutetoGd2O3nanoparticlesforMRIapplications:anexperimentalandtheoreticalstudy,Journalofnanoparticleresearch,2012,(14),8.
NataliaAbrikossova,CarolineSkoglund,MariaAhrén,TorbjornBengtsson,KajsaUvdal,Effectsofgadoliniumoxidenanoparticlesontheoxidativeburstfromhumanneutrophilgranulocytes,Nanotechnology,2012,(23),27,275101.
Lic:JenniferUllbrand,PhasefieldmodelingofSpinodaldecompositioninTiAlN,2012.
Lic:RikardForsén,MechanicalpropertiesandthermalstabilityofreactivearcevaporatedTi-Cr-Al-Ncoatings,2012.
Lic:NiklasNorrby,HighpressureandhightemperaturebehaviorofTiAlN,2012.
JesperStjernberg,JohnCIon,Marta-LenaAntti,Lars-OlofNordin,BoLindblom,MagnusOdén,Extendedstudiesofdegradationmechanismsintherefractoryliningofarotarykilnforironorepelletproduction,JournaloftheEuropeanCeramicSociety,2012,(32),8,1519-1528.
FerencTasnadi,MagnusOdén,IgorAbrikosov,AbinitioelastictensorofcubicTi0.5Al0.5Nalloys:Dependenceofelasticconstantsonsizeandshapeofthesupercellmodelandtheirconvergence,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),14,144112.
LarsJohnson,MattiasThuvander,KrystynaStiller,MagnusOdén,LarsHultman,SpinodaldecompositionofTi0.33Al0.67Nthinfilmsstudiedbyatomprobetomography,ThinSolidFilms,2012,(520),13,4362-4368.
JonasLauridsen,PerEklund,JunLu,AKnutsson,AMAndersson,LarsHultman,MagnusOdén,MicrostructuralandChemicalAnalysisofAgICoatingsUsedasaSolidLubricantinElectricalSlidingContacts,Tribologyletters,2012,(46),2,187-193.
Ph.D.:LinaRogström,HightemperaturebehaviorofarcevaporatedZrAlNandTiAlNthinfilms,2012.
LinaRogström,JenniferUllbrand,J.Almer,LarsHultman,B.Jansson,MagnusOdén,StrainevolutionduringspinodaldecompositionofTiAlNthinfilms,ThinSolidFilms,2012,(520),17,5542-5549.
LinaRogström,NaureenGhafoor,MatsAhlgren,MagnusOdén,Auto-organizingZrAlN/ZrAlTiN/TiNmultilayers,ThinSolidFilms,2012,(520),21,6451-6454.
LinaRogström,MatsJohansson,NaureenGhafoor,LarsHultman,MagnusOdén,InfluenceofchemicalcompositionanddepositionconditionsonmicrostructureevolutionduringannealingofarcevaporatedZrAlNthinfilms,JournalofVacuumScience&Technology.A.Vacuum,Surfaces,andFilms,2012,(30),3,031504.
YaqoobKhan,SajjadHussain,FredrikSöderlind,Per-OlovKäll,MazharAliAbbasi,ShahidKhanDurrani,Honeycombβ-Ni(OH)2filmsgrownon3Dnickelfoamsubstratesatlowtemperature,Materialsletters(Generaled.),2012,(69),37-40.
EdwinEscalera,MohamedA.Ballem,JoséM.Cordoba,Marta-LenaAntti,MagnusOdén,SynthesisofhomogeneouslydispersedcobaltnanoparticlesintheporesoffunctionalizedSBA-15silica,PowderTechnology,2012,(221),S1,359-364.
MohamedA.Ballem,XuanjunZhang,EmmaM.Johansson,JoséM.Córdoba,MagnusOdén,LowTemperatureNanocastingofUltrafineHematiteNanoparticlesusingMesoporousSilicaMolds,PowderTechnology,2012,(217),269-273.
AndersEriksson,NaureenGhafoor,JensJensen,Lars-ÅkeNäslund,MatsJohansson,J.Sjölen,MagnusOdén,LarsHultman,JohannaRosén,ArcdepositionofTi–Si–C–Nthinfilmsfrombinaryandternarycathodes–ComparingsourcesofC,Surface&CoatingsTechnology,2012,(213),145-154.
NiklasNorrby,MatsJohansson,RachidM’Saoubi,MagnusOdén,PressureandtemperatureeffectsonthedecompositionofarcevaporatedTi0.6Al0.4Ncoatingsduringmetalcutting,Surface&CoatingsTechnology,2012,(209),203-207.
DidemSenKaraman,DitiDesai,RajendranSenthilkumar,EmmaJohansson,NatalieRatts,MagnusOdén,JohnEEriksson,CeciliaSahlgren,DianaM.Toivola,JessicaM.Rosenholm,Shapeengineeringvsorganicmodificationofinorganicnanoparticlesasatoolforenhancingcellularinternalization,NanoscaleResearchLetters,2012,(7),358.
MuhammadBilalSyed,RikardForsén,NaureenGhafoor,MagnusOdén,ThermalStabilityofArcEvaporatedZrCrAlN,2012.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 99
pU
Bli
ca
tiO
ns
& t
he
se
s
RikardForsén,MatsJohansson,MagnusOdén,NaureenGhafoor,DecompositionandphasetransformationinTiCrAlNthincoatings,JournalofVacuumScience&Technology.A.Vacuum,Surfaces,andFilms,2012,(30),6.
LinaRogström,MatsAhlgren,J.Almer,LarsHultman,MagnusOdén,PhasetransformationsinnanocompositeZrAlNthinfilmsduringannealing,JournalofMaterialsResearch,2012,(27),13,1716-1724.
plasMa and coatIngs pHysIcs ChunqingHuo,MichaelARaadu,DanielLundin,JonTomasGudmundsson,AndreAnders,NilsBrenning,Gasrarefactionandthetimeevolutionoflonghigh-powerimpulsemagnetronsputteringpulses,Plasmasourcesscience&technology(Print),2012,(21),4,045004.
Ph.D.:MattiasSamuelsson,FundamentalaspectsofHiPIMSunderindustrialconditions,2012.
Lic:AsimAijaz,HiPIMS-basedNovelDepositionProcessesforThinFilms,2012.
MattiasSamuelsson,DanielLundin,KostasSarakinos,FredrikBjorefors,BengtWalivaara,HenrikLjungcrantz,UlfHelmersson,Influenceofionizationdegreeonfilmpropertieswhenusinghighpowerimpulsemagnetronsputtering,JournalofVacuumScience&Technology.A.Vacuum,Surfaces,andFilms,2012,(30),3,031507.
DanielLundin,KostasSarakinos,Anintroductiontothinfilmprocessingusinghigh-powerimpulsemagnetronsputtering,JournalofMaterialsResearch,2012,(27),5,780-792.
NBrenning,CHuo,DanielLundin,MARaadu,CVitelaru,GDStancu,TMinea,UlfHelmersson,Understandingdepositionratelossinhighpowerimpulsemagnetronsputtering:I.Ionization-drivenelectricfields,Plasmasourcesscience&technology(Print),2012,(21),2,025005.
CVitelaru,DanielLundin,GDStancu,NBrenning,JBretagne,TMinea,ArgonmetastablesinHiPIMS:time-resolvedtunablediode-laserdiagnostics,Plasmasourcesscience&technology(Print),2012,(21),2,025010.
AsimAijaz,KostasSarakinos,DanielLundin,NilsBrenning,UlfHelmersson,Astrategyforincreasedcarbonionizationinmagnetronsputteringdischarges,Diamondandrelatedmaterials,2012,(23),1-4.
MattiasSamuelsson,KostasSarakinos,HansHögberg,ErikLewin,UlfJansson,BengtWälivaara,HenrikLjungcrantz,UlfHelmersson,GrowthofTiC/a-C:Hnanocompositefilmsbyreactivehighpowerimpulsemagnetronsputteringunderindustrialconditions,Surface&CoatingsTechnology,2012,(206),8-9,2396-2402.
FrankoGreiner,JanCarstensen,NilsKoehler,IrisPilch,HelgeKetelsen,SaschaKnist,AlexanderPiel,ImagingMieellipsometry:dynamicsofnanodustcloudsinanargon-acetyleneplasma,Plasmasourcesscience&technology(Print),2012,(21),6,065005.
HenrikPedersen,PetterLarsson,AsimAijaz,JensJensen,DanielLundin,Anovelhigh-powerpulsePECVDmethod,Surface&CoatingsTechnology,2012,(206),22,4562-4566.
MohsinRaza,KostsSarakinos,AsimAijaz,UlfHelmersson,Synthesisofhydrogenatedamorphouscarbon(a-C:H)thinfilmsbyHiPIMS-basedprocesses,2012.
PärArumskog,KostasSarakinos,UlfHelmersson,ACombinatorialChemistryApproachtotheAmorphousAl-In-Zn-OTransparentOxideSemiconductorSystem,2012.
J.T.Gudmundsson,N.Brenning,DanielLundin,UlfHelmersson,Highpowerimpulsemagnetronsputteringdischarge,JournalofVacuumScience&Technology.A.Vacuum,Surfaces,andFilms,2012,(30),030801.
seMIcondUctor MaterIals AgnėŽukauskaitė,ChristopherTholander,JustinasPališaitis,PerO.Å.Persson,VanyaDarakchieva,NebihaBenSedrine,FerencTasnádi,BjörnAlling,JensBirch,LarsHultman,YxAl1-xNThinFilms,JournalofPhysicsD,2012,(45),42,422001.
RRamzan,FZafar,SArshad,QamarUlWahab,Figureofmeritfornarrowband,widebandandmultibandLNAs,Internationaljournalofelectronics(Print),2012,(99),11,1603-1610.
IJvanRooyen,JHNeethling,AnneHenry,ErikJanzén,SMMokoduwe,AJansevanVuuren,EOlivier,Effectsofphosphorous-dopingandhightemperatureannealingonCVDgrown3C-SiC,NuclearEngineeringandDesign,2012,(251),SI,191-202.
SYang,BHLin,CCKuo,HCHsu,W-RLiu,MOEriksson,Per-OlofHoltz,C-SChang,C-HHsu,WFHsieh,ImprovementofCrystallineandPhotoluminescenceofAtomicLayerDepositedm-PlaneZnOEpitaxialFilmsbyAnnealingTreatment,CrystalGrowth&Design,2012,(12),10,4745-4751.
Hsu-ChengHsu,Geng-MingHsu,Yu-shiungLai,ZheChuanFeng,Shuo-YenTseng,AndersLundskog,UrbanForsberg,ErikJanzén,Kuei-HsienChen,Li-ChyongChen,Polarizedanddiameter-dependentRamanscatteringfromindividualaluminumnitridenanowires:Theantennaandcavityeffects,AppliedPhysicsLetters,2012,(101),12,121902.
HenrikPedersen,CarinaHöglund,JensBirch,JensJensen,AnneHenry,LowTemperatureCVDofThin,AmorphousBoron-CarbonFilmsforNeutronDetectors,ChemicalVaporDeposition,2012,(18),7-9,221-224.
MartinFagerlind,IanDonBooker,PederBergman,ErikJanzén,HerbertZirath,NiklasRorsman,InfluenceofLarge-Aspect-RatioSurfaceRoughnessonElectricalCharacteristicsofAlGaN/AlN/GaNHFETs,IEEEtransactionsondeviceandmaterialsreliability,2012,(12),3,538-546.
CarlJunesand,ChenHu,ZhechaoWang,WondwosenMetaferia,PriteshDagur,GaliaPozina,LarsHultman,SebastianLourdudoss,EffectoftheSurfaceMorphologyofSeedandMaskLayersonInPGrownonSibyEpitaxialLateralOvergrowth,JournalofElectronicMaterials,2012,(41),9,2345-2349.
VolodymyrKhranovskyy,VLazorenko,GLashkarev,RositsaYakimova,LuminescenceanisotropyofZnOmicrorods,JournalofLuminescence,2012,(132),10,2643-2647.
BogdanRanguelov,DesislavaGoranova,VesselinTonchev,RositsaYakimova,DiffusionLimitedAggregationwithmodifiedlocalrules,ComptesRendusdel’AcademieBulgaredesSciences/ProceedingsoftheBulgarianAcademyofSciences,2012,(65),7,913-918.
YiyuOu,ValdasJokubavicius,RositzaYakimova,MikaelSyväjärvi,HaiyanOu,OmnidirectionalluminescenceenhancementoffluorescentSiCviapseudoperiodicantireflectivesubwavelengthstructures,OpticsLetters,2012,(37),18,3816-3818.
VolodymyrKhranovskyy,TobiasEkblad,RositsaYakimova,LarsHultman,Surfacemorphologyeffectsonthelight-controlledwettabilityofZnOnanostructures,AppliedSurfaceScience,2012,(258),20,8146-8152.
Conference:M.Asghar,F.Iqbal,SadiaMunichaFaraz,ValdasJokubavicius,QamarWahab,MikaelSyväjärvi,Studyofdeepleveldefectsindopedandsemi-insulatingn-6H-SiCepilayersgrownbysublimationmethod,2012.
Conference:M.Asghar,F.Iqbal,SadiaFaraz,ValdasJokubavicius,QamarWahab,MikaelSyväjärvi,Characterizationofdeepleveldefectsinsublimationgrownp-type6H-SiCepilayersbydeepleveltransientspectroscopy,2012.
HenrikPedersen,MikhailChubarov,HansHögberg,JensJensen,AnneHenry,Ontheeffectofwaterandoxygeninchemicalvapordepositionofboronnitride,ThinSolidFilms,2012,(520),18,5889-5893.
100 IFM actIvIty report 2012
JianwuSun,IvanGueorguievIvanov,RickardLiljedahl,RositsaYakimova,MikaelSyväjärvi,Considerablylongcarrierlifetimesinhigh-quality3C-SiC(111),AppliedPhysicsLetters,2012,(100),25,252101.
MilenaBeshkova,JensBirch,MikaelSyväjärvi,RositsaYakimova,Sublimationepitaxyof3C-SiCgrownatSi-andC-richconditions,Vacuum,2012,(86),10,1595-1599.
AndersLundskog,JustinasPalisaitis,Chih-WeiHsu,MartinEriksson,LarsHultman,PerPersson,UrbanForsberg,Per-OlofHoltz,ErikJanzén,InGaNquantumdotformationmechanismonhexagonalGaN/InGaN/GaNpyramids,Nanotechnology,2012,(23),30,305708.
Ph.D.:MengyaoXie,StructuralandelasticpropertiesofInNandInAlNwithdifferentsurfaceorientationsanddoping,2012.
RositzaYakimova,LinneaSelegård,VolodymyrKhranovskyy,RuthPearce,AnitaLloydSpetz,KajsaUvdal,ZnOmaterialsandsurfacetailoringforbiosensing,Frontiersinbioscience(Eliteedition),2012,(4),254-278.
MikhailChubarov,HenrikPedersen,HansHögberg,JensJensen,AnneHenry,GrowthofHighQualityEpitaxialRhombohedralBoronNitride,CrystalGrowth&Design,2012,(12),6,3215-3220.
JensEriksson,RuthPearce,TihomirIakimov,ChariyaVirojanadara,DanielaGogova,MikeAndersson,MikaelSyväjärvi,AnitaLloydSpetz,RositzaYakimova,TheinfluenceofsubstratemorphologyonthicknessuniformityandunintentionaldopingofepitaxialgrapheneonSiC,AppliedPhysicsLetters,2012,(100),24,241607.
HenrikPedersen,StefanoLeone,OlleKordina,AnneHenry,Shin-ichiNishizawa,YaroslavKoshka,ErikJanzén,Chloride-BasedCVDGrowthofSiliconCarbideforElectronicApplications,ChemicalReviews,2012,(112),4,2434-2453.
JianwuSun,T.Robert,A.Andreadou,A.Mantzari,ValdasJokubavicius,RositsaYakimova,J.Camassel,S.Juillaguet,E.K.Polychroniadis,MikaelSyväjärvi,Shockley-Frankstackingfaultsin6H-SiC,JournalofAppliedPhysics,2012,(111),113527.
TJBMJanssen,JMWilliams,NEFletcher,RGoebel,ATzalenchuk,RositsaYakimova,SLara-Avila,SKubatkin,VIFalko,PrecisioncomparisonofthequantumHalleffectingrapheneandgalliumarsenide,Metrologia,2012,(49),3,294-306.
VPanchal,KCedergren,RositsaYakimova,ATzalenchuk,SKubatkin,OKazakova,Smallepitaxialgraphenedevicesformagnetosensingapplications,JournalofAppliedPhysics,2012,(111),7,07E509.
SomsakulWatcharinyanon,LeifIJohansson,ChaoXia,ChariyaVirojanadara,Changesinstructuralandelectronicpropertiesofgraphenegrownon6H-SiC(0001)inducedbyNadeposition,JournalofAppliedPhysics,2012,(111),8,083711.
JAAEngelbrecht,IJvanRooyen,AnneHenry,ErikJanzén,EJOlivier,TheoriginofapeakinthereststrahlenregionofSiC,Physica.B,Condensedmatter,2012,(407),10,1525-1528.
AndreasGällström,BjörnMagnusson,FranziskaBeyer,AdamGali,NguyenSonTien,StefanoLeone,IvanGueorguievIvanov,CarlHemmingsson,AnneHenry,ErikJanzén,Opticalidentificationandelectronicconfigurationoftungstenin4H-and6H-SiC,Physica.B,Condensedmatter,2012,(407),10,1462-1466.
AnneHenry,StefanoLeone,FranziskaBeyer,HenrikPedersen,OlleKordina,SvenAndersson,ErikJanzén,SiCepitaxygrowthusingchloride-basedCVD,Physica.B,Condensedmatter,2012,(407),10,1467-1471.
Per-OlofHoltz,Chih-WeiHsu,LALarsson,KFredrikKarlsson,DanielDufåker,AndersLundskog,UrbanForsberg,ErikJanzén,EvgeniiMoskalenko,VDimastrodonato,LMereni,EPelucchi,Opticalcharacterizationofindividualquantumdots,Physica.B,Condensedmatter,2012,(407),10,1472-1475.
VolodymyrKhranovskyy,RositsaYakimova,MorphologyengineeringofZnOnanostructures,Physica.B,Condensedmatter,2012,(407),10,1533-1537.
VolodymyrKhranovskyy,RositsaYakimova,FredrikKarlsson,AbdulSSyed,Per-OlofHoltz,ZelalemNigussaUrgessa,OluwatobiSamuelOluwafemi,JohannesReinhardtBotha,ComparativePLstudyofindividualZnOnanorods,grownbyAPMOCVDandCBDtechniques,Physica.B,Condensedmatter,2012,(407),10,1538-1542.
JianwuSun,SatoshiKamiyama,ValdasJokubavicius,H.Peyre,RositsaYakimova,S.Juillaguet,MikaelSyväjärvi,Fluorescentsiliconcarbideasanultraviolet-to-visiblelightconverterbycontrolofdonortoacceptorrecombinations,JournalofPhysicsD,2012,(45),23,235107.
VanyaDarakchieva,KLorenz,MengyaoXie,EAlves,WJSchaff,TYamaguchi,YNanishi,SRuffenach,MMoret,OBriot,UnintentionalincorporationofHandrelatedstructuralandfree-electronpropertiesofc-anda-planeInN,PhysicaStatusSolidiA-ApplicationsAndMaterialsScience,2012,(209),1,91-94.
Conference:YiyuOu,ValdasJokubavicius,ChuanLiu,RolfW.Berg,MargaretaLinnarsson,SatoshiKamiyama,ZhaoyueLu,RositzaYakimova,MikaelSyväjärvi,HaiyanOu,PhotoluminescenceandRamanspectroscopycharacterizationofboronandnitrogen-doped6Hsiliconcarbide,2012.
StefanoLeone,OlleKordina,AnneHenry,Shin-ichiNishizawa,ÖrjanDanielsson,ErikJanzén,Gas-PhaseModelingofChlorine-BasedChemicalVaporDepositionofSiliconCarbide,CrystalGrowth&Design,2012,(12),4,1977-1984.
ThomasMaassen,JJaspervandenBerg,NatasjaIJbema,FelixFromm,ThomasSeyller,RositsaYakimova,BartJvanWees,LongSpinRelaxationTimesinWaferScaleEpitaxialGrapheneonSiC(0001),Nanoletters(Print),2012,(12),3,1498-1502.
YiyuOu,ValdasJokubavicius,PhilipHens,MichlKaiser,PeterWellmann,RositsaYakimova,MikaelSyväjärvi,HaiyanOu,BroadbandandomnidirectionallightharvestingenhancementoffluorescentSiC,OpticsExpress,2012,(20),7,7575-7579.
IJvanRooyen,JAAEngelbrecht,AnneHenry,ErikJanzén,JHNeethling,PMvanRooyen,Theeffectofgrainsizeandphosphorous-dopingofpolycrystalline3C-SiConinfraredreflectancespectra,JournalofNuclearMaterials,2012,(422),1-3,103-108.
RuiMasuda,Chih-WeiHsu,MartinEriksson,YoshinaoKumagai,AkinoriKoukitu,Per-OlofHoltz,ImprovementsinOpticalPropertiesof(0001)ZnOLayersGrownon(0001)SapphireSubstratesbyHalideVaporPhaseEpitaxyUsingThickBufferLayers,JapaneseJournalofAppliedPhysics,2012,(51),3,031103.
Ph.D.:RemigijusVasiliauskas,SublimationGrowthandPerformanceofCubicSiliconCarbide,2012.
RemigijusVasiliauskas,A.Mekys,P.Malinovskis,MikaelSyväjärvi,J.Storasta,RositzaYakimova,Influenceoftwinboundaryorientationonmagnetoresistivityeffectinfreestanding3C–SiC,Materialsletters(Generaled.),2012,(74),203-205.
RemigijusVasiliauskas,A.Mekys,P.Malinovskis,SandrineJuillaguer,MikaelSyväjärvi,J.Storasta,RisitzaYakimova,ImpactofextendeddefectsonHallandmagnetoresistivityeffectsincubicsiliconcarbide,JournalofPhysicsD,2012,(45),22,225102.
RemigijusVasiliauskas,SandrineJuillaguer,MikaelSyväjärvi,RisitzaYakimova,CubicSiCformationontheC-faceof6H-SiC(0001)substrates,JournalofCrystalGrowth,2012,(348),1,91-96.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 101
pU
Bli
ca
tiO
ns
& t
he
se
s
YiyuOu,ValdasJokubavicius,MargaretaLinnarsson,RositzaYakimova,MikaelSyväjärvi,HaiyanOu,Characterizationofdonor–acceptor-pairemissioninfluorescent6H-SiC,PhysicaScripta,2012,(T148),014003.
MikaelSyväjärvi,J.Müller,JianwuSun,VytautasGrivickas,YiyuOu,ValdasJokubavicius,PhilipHens,M.Kaisr,KanaparinAriyawong,K.Gulbinas,RickardLiljedahl,M.K.Linnarsson,S.Kamiyama,P.Wellmann,E.Spiecker,H.Ou,FluorescentSiCasanewmaterialforwhiteLEDs,Physicascripta.T,2012,(T148),014002.
DWBoukhvalov,ChariyaVirojanadara,Penetrationofalkaliatomsthroughoutagraphenemembrane:theoreticalmodeling,Nanoscale,2012,(4),5,1749-1753.
SergeyKhromov,BoMonemar,V.Avrutin,XingLi,H.Morkoç,LarsHultman,GaliaPozina,Opticalandstructuralstudiesofhomoepitaxiallygrownm-planeGaN,AppliedPhysicsLetters,2012,(100),17,172108.
ChaoXia,SomsakulWatcharinyanon,AAZakharov,RositsaYakimova,LarsHultman,LeifIJohansson,ChariyaVirojanadara,Siintercalation/deintercalationofgrapheneon6H-SiC(0001),PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),4,045418.
PhilipHens,ValdasJokubavicius,RickardLiljedahl,GWagner,RositsaYakimova,PWellmann,MikaelSyväjärvi,Sublimationgrowthofthickfreestanding3C-SiCusingCVD-templatesonsiliconasseeds,Materialsletters(Generaled.),2012,(67),1,300-302.
K.FredrikKarlsson,AmloySupaluck,Y.T.Chen,K.H.Chen,H.C.Hsu,C.L.Hsiao,L.C.Chen,Per-OlofHoltz,PolarizedemissionandexcitonicfinestructureenergiesofInGaNquantumdots,Physica.B,Condensedmatter,2012,(407),10,1553-1555.
RemigijusVasiliauskas,MayaMarinova,PhilipHens,PeterWellmann,MikaelSyväjärvi,RositsaYakimova,NucleationControlofCubicSiliconCarbideon6H-Substrates,CrystalGrowth&Design,2012,(12),1,197-204.
J.W.Sun,VolodymyrKhranovskyy,MMexis,MEriksson,MikaelSyväjärvi,ITsiaoussis,GholamrezaYazdi,HPeyre,SJuillaguet,JCamassel,Per-OlofHoltz,PederBergman,LarsHultman,RositsaYakimova,Comparativemicro-photoluminescenceinvestigationofZnOhexagonalnanopillarsandtheseedinglayergrownon4H-SiC,JournalofLuminescence,2012,(132),1,122-127.
SSonde,CVecchio,FGiannazzo,RositsaYakimova,ERimini,Effectofgraphene/4H-SiC(0001)interfaceonelectrostaticpropertiesingraphene,Physica.E,Low-Dimensionalsystemsandnanostructures,2012,(44),6,993-996.
SomsakulWatcharinyanon,LeifJohansson,A.A.Zakharov,ChariyaVirojanadara,StudiesofLiintercalationofhydrogenatedgrapheneonSiC(0001),SurfaceScience,2012,(606),3-4,401-406.
MengyaoXie,FerencTasnadi,IgorAbrikosov,LarsHultman,VanyaDarakchieva,Elasticconstants,composition,andpiezolectricpolarizationinInxAl1-xN:FromabinitiocalculationstoexperimentalimplicationsfortheapplicabilityofVegardsrule,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),15,155310.
TimLBurnett,RositsaYakimova,OlgaKazakova,Identificationofepitaxialgraphenedomainsandadsorbedspeciesinambientconditionsusingquantifiedtopographymeasurements,JournalofAppliedPhysics,2012,(112),5,054308.
Other:JustinasPalisaitis,AndersLundskog,UrbanForsberg,ErikJanzén,JensBirch,LarsHultman,PerPersson,CharacterizationofInGaN/GaNquantumwellgrowthusingmonochromatedvalenceelectronenergylossspectroscopy,2012.
Ph.D.:AndersLundskog,ControlledgrowthofhexagonalGaNpyramidsandInGaNQDs,2012.
NguyenTienSon,XuanThangTrinh,LSLovlie,B.G.Svensson,K.Kawahara,J.Suda,T.Kimoto,T.Umeda,J.Isoya,T.Makino,T.Ohshima,ErikJanzén,Negative-USystemofCarbonVacancyin4H-SiC,PhysicalReviewLetters,2012,(109),18,187603.
FranziskaBeyer,CarlHemmingsson,HenrikPedersen,AnneHenry,JIsoya,NMorishita,TOhshima,ErikJanzén,Capacitancetransientstudyofabistabledeepleveline(-)-irradiatedn-type4H-SiC,JournalofPhysicsD,2012,(45),45.
SatoshiKamiyama,MotoakiIwaya,TetsuyaTakeuchi,IsamuAkasaki,RositsaYakimova,MikaelSyväjärvi,Whitelight-emittingdiodebasedonfluorescentSiC,ThinSolidFilms,2012,(522),23-25.
ValdasJokubavicius,P.Hens,RichardLiljedahl,JianwuSun,M.Kaiser,P.Wellmann,S.Sano,RositzaYakimova,S.Kamiyama,MikaelSyväjärvi,EffectsofsourcematerialonepitaxialgrowthoffluorescentSiC,ThinSolidFilms,2012,(522),7-10.
JianwuSun,ValdasJokubavicius,RickardLiljedahl,RositsaYakimova,S.Juillaguet,J.Camassel,S.Kamiyama,MikaelSyväjärvi,RoomtemperatureluminescencepropertiesoffluorescentSiCaswhitelightemittingdiodemedium,ThinSolidFilms,2012,(522),33-35.
PeterWellmann,MikaelSyväjärvi,MichaelKneissel,RongminWang,PrefacetoselectedpapersfromEMRS2011SymposiumQ:Engineeringofwidebandgapsemiconductormaterialsforenergysaving,ThinSolidFilms,2012,(522),1-1.
Conference:SofieNystrom,ErinNelson,NinaReitan,PalEllingsen,Ann-ChristinBrorsson,JeffreyMason,LeifJohansson,ChananSluzny,SusannHandrick,StefanProkop,BettinaWegenast-Braun,SimoneHornemann,KatarinaKågedal,MikaelLindgren,FrankHeppner,MathiasJucker,AdrianoAguzzi,PeterNilsson,PerHammarström,MonitoringamyloidformationandmaturationinvitroandinvivousingLCOfluorescenceinPRION,vol6,issue,pp13-13,PRION,2012.
HenrikPedersen,PetterLarsson,AsimAijaz,JensJensen,DanielLundin,Anovelhigh-powerpulsePECVDmethod,Surface&CoatingsTechnology,2012,(206),22,4562-4566.
NThierry-Jebali,Jawadul-Hassan,MLazar,DPlanson,EBano,AnneHenry,ErikJanzén,PBrosselard,Observationofthegenerationofstackingfaultsandactivedegradationmeasurementsonoff-axisandon-axis4H-SiCPiNdiodes,AppliedPhysicsLetters,2012,(101),22,222111.
MiZhou,FrankLPasquale,PeterADowben,AlexBoosalis,MathiasSchubert,VanyaDarakchieva,RositsaYakimova,LingmeiKong,JeffryAKelber,DirectgraphenegrowthonCo3O4(111)bymolecularbeamepitaxy,JournalofPhysics,2012,(24),7,072201.
JHChoi,LLatu-Romain,EBano,AnneHenry,WJLee,TChevolleau,TBaron,Comparativestudyondryetchingofalpha-andbeta-SiCnano-pillars,Materialsletters(Generaled.),2012,(87),9-12.
NguyenSonTien,XuanThangTrinh,AndreasGällström,StefanoLeone,OlleKordina,ErikJanzén,KrisztianSzasz,ViktorIvady,AdamGali,ElectronparamagneticresonanceandtheoreticalstudiesofNbin4H-and6H-SiC,JournalofAppliedPhysics,2012,(112),8,083711.
FGiannazzo,IDeretzis,ALaMagna,FRoccaforte,RositsaYakimova,Electronictransportatmonolayer-bilayerjunctionsinepitaxialgrapheneonSiC,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),23,.
102 IFM actIvIty report 2012
A.Boosalis,T.Hofmann,VanyaDarakchieva,RositsaYakimova,M.Schubert,Visibletovacuumultravioletdielectricfunctionsofepitaxialgrapheneon3Cand4HSiCpolytypesdeterminedbyspectroscopicellipsometry,AppliedPhysicsLetters,2012,(101),1,.
XiaolongZhu,YiyuOu,ValdasJokubavicius,MikaelSyväjärvi,OleHansen,HaiyanOu,N.AsgerMortensen,SanshuiXiao,Broadbandlight-extractionenhancedbyarraysofwhisperinggalleryresonators,AppliedPhysicsLetters,2012,(101),24,.
Conference:ValdasJokubavicius,BjörnLundqvist,PhilipHens,RickardLiljedahl,RositzaYakimova,SatoshiKamiyama,MikaelSyväjärvi,Onstabilizationof3C-SiCusinglowoff-axis6H-SiCsubstrates,2012.
Conference:JianwuSun,T.Robert,ValdasJokubavicius,S.Juillaguet,RositzaYakimova,MikaelSyväjärvi,J.Camassel,LowTemperaturePhotoluminescenceSignatureofStackingFaultsin6H-SiCEpilayersGrownonLowAngleOff-axisSubstrates,2012.
SupaluckAmloy,EvgeniiMoskalenko,MEriksson,KFredrikKarlsson,YTChen,KHChen,HCHsu,CLHsiao,LCChen,Per-OlofHoltz,DynamiccharacteristicsoftheexcitonandthebiexcitoninasingleInGaNquantumdot,AppliedPhysicsLetters,2012,(101),6.
SupaluckAmloy,FredrikKarlsson,T.G.Andersson,Per-OlofHoltz,OnthepolarizedemissionfromexcitoncomplexesinGaNquantumdots,AppliedPhysicsLetters,2012,(100),021901.
T.Hofmann,P.Kuehne,S.Schöche,Jr-TaiChen,UrbanForsberg,ErikJanzén,N.BenSedrine,C.MHerzinger,J.AWoollam,M.Schubert,VanyaDarakchieva,TemperaturedependenteffectivemassinAlGaN/GaNhighelectronmobilitytransistorstructures,AppliedPhysicsLetters,2012,(101),19.
AnnopEktarawong,Growthandcharacterizationofgrapheneon4H-SiC(0001),2012.
Conference:PederBergman,IanDonBooker,LouiseLilja,JawadHassan,ErikJanzén,RadialVariationofMeasuredCarrierLifetimesinEpitaxialLayersGrownwithWaferRotation,MaterialsScienceForumVols717-720,2012.
Conference:LouiseLilja,JawadHassan,IanBooker,PederBergman,ErikJanzén,InfluenceofGrowthTemperatureonCarrierLifetimein4H-SiCEpilayers,MaterialsScienceForumVols740-742(2012),2012.
Conference:IanDonBooker,JawadHassan,AndersHallén,,EinarÖ.Sveinbjörnsson,OlleKordina,PederBergman,ComparisonofPost-GrowthCarrierLifetimeImprovementMethodsfor4H-SiCEpilayers,MaterialsScienceForumVols717-720,2012.
Conference:IanDonBooker,JawadHassan,ErikJanzén,PederBergman,High-ResolutionTime-ResolvedCarrierLifetimeandPhotoluminescenceMappingof4H-SiCEpilayers,MaterialsScienceForumVols717-720,2012.
Conference:JawadHassan,LouiseLilja,IanDonBooker,PederBergman,ErikJanzén,InfluenceofGrowthMechanismonCarrierLifetimeinon-axisHomoepitaxialLayersof4H-SiC,MaterialsScienceForumVols717-720,2012.
Conference:AndreasGällström,BjörnMagnusson,FranziskaBeyer,AdamGali,NguyenTienSon,StefanoLeone,IvanG.Ivanov,AnneHenry,CarlHemmingsson,ErikJanzén,ElectronicConfigurationofTungstenin4H-,6H-,and15R-SiC,MaterialsScienceForumVols717-720,2012.
Conference:PhilipHens,JulianMüller,ErdmannSpiecker,PeterWellmann,Defectstructuresatthesilicon/3C-SiCinterface,MaterialsScienceForumVols717-720,2012.
Conference:PhilipHens,J.Müller,G.Wagner,RickardLiljedahl,RositsaYakimova,E.Spiecker,P.Wellmann,MikaelSyväjärvi,Freestanding3C-SiCgrownbysublimationepitaxyusing3C-SiCtemplatesonsilicon,MaterialsScienceForumVols717-720,2012.
Conference:AndreasGällström,IvanGueorguievIvanov,R.Coble,R.P.Devaty,W.J.Choyke,ErikJanzén,Investigationofintrinsiccarbon-relateddefectsin4H-SiCbyselective-excitationphotoluminescencespectroscopy,MaterialsScienceForumVols717-720,2012.
Conference:LeifI.Johansson,SomsakulWatcharinyanon,A.A.Zakharov,RositsaYakimova,ChariyaVirojanadara,TheregistryofgraphenelayersgrownonSiC(000-1),MaterialsScienceForumVols717-720,2012.
Conference:StefanoLeone,HenrikPedersen,FranziskaBeyer,SvenAndersson,OlleKordina,AnneHenry,AndreaCanino,FrancescoLaVia,ErikJanzén,Chloride-BasedCVDof4H-SiCatHighGrowthRatesonSubstrateswithDifferentOff-Angles,MaterialsScienceForumVols717-720,2012.
Conference:XunLi,StefanoLeone,SvenAndersson,OlleKordina,AnneHenry,ErikJanzén,CVDHeteroepitaxialGrowthof3C-SiCon4H-SiC(0001)Substrates,MaterialsScienceForumVols717-720,2012.
Conference:RuthPearce,RositsaYakimova,JohanEriksson,LarsHultman,MikeAndersson,AnitaLloydSpetz,DevelopmentofFETsandresistivedevicesbasedonepitaxiallygrownsinglelayergrapheneonSiCforhighlysensitivegasdetection,MaterialsScienceForumVols717-720,2012.
Conference:NguyenTienSon,V.Ivady,AdamGali,AndreasGällström,StefanoLeone,OlleKordina,ErikJanzén,IdentificationofNiobiumin4H-SiCbyEPRandabInitioStudies,MaterialsScienceForumVols717-720,2012.
Conference:MikaelSyväjärvi,RositsaYakimova,M.Iwaya,T.Takeuchi,I.Akasaki,SatoshiKamiyama,GrowthandlightpropertiesoffluorescentSiCforwhiteLEDs,MaterialsScienceForumVols717-720,2012.
Conference:Jawadul-Hassan,ChariyaVirojanadara,A.Meyer,IvanGueorguievIvanov,J.I.Flege,SomsakulWatcharinyanon,JFalta,LeifI.Johansson,ErikJanzén,Controlofepitaxialgraphenethicknesson4H-SiC(0001)andbufferlayerremovalthroughhydrogenintercalation,MaterialsScienceForum(Volumes717-720),2012.
Conference:ChariyaVirojanadara,SomsakuWatcharinyanon,A.A.Zakharov,RositsaYakimova,LeifI.Johansson,StudiesofLiintercalationintoepitaxialgrapheneonSiC(0001),MaterialsScienceForumVols717-720,2012.
Conference:MilanYazdanfar,StefanoLeone,HenrikPedersen,OlleKordina,AnneHenry,ErikJanzén,Carrotdefectcontrolinchloride-basedCVDthroughoptimizedrampupconditions,MaterialsScienceForumVols717-720,2012.
Conference:RositsaYakimova,RemigijusVasiliauskas,JensEriksson,MikaelSyväjärvi,Progressin3C-SiCgrowthandnovelapplications,MaterialsScienceForumVol711,2012.
Conference:AnneHenry,XunLi,StefanoLeone,OlofKordina,ErikJanzén,CVDgrowthof3C-SiCon4H-SiCsubstrate,MaterialsScienceForumVol711,2012.
AMRBaker,JAAlexander-Webber,TAltebaeumer,TJBMJanssen,ATzalenchuk,SLara-Avila,SKubatkin,RositsaYakimova,C-TLin,L-JLi,RJNicholas,Weaklocalizationscatteringlengthsinepitaxial,andCVDgraphene,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),23.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 103
pU
Bli
ca
tiO
ns
& t
he
se
s
AndersLundskog,UrbanForsberg,Per-OlofHoltz,ErikJanzén,Morphologycontrolofhot-wallMOCVDselectivearea-grownhexagonalGaNpyramids,CrystalGrowth&Design,2012,(12),11,5491-5496.
AneliaKakanakova-Gueorgieva,DanielNilsson,ErikJanzén,High-qualityAlNlayersgrownbyhot-wallMOCVDatreducedtemperatures,JournalofCrystalGrowth,2012,(338),1,52-56.
E.F.deAlmeidaJunior,F.deBritoMota,C.M.C.deCastilho,AneliaKakanakova-Gueorgieva,GueorguiKostovGueorguiev,Defectsinhexagonal-AlNsheetsbyfirst-principlescalculations,EuropeanPhysicalJournalB,2012,(85),1.
GabrielCivrac,FarahLaariedh,NicolasThierry-jebali,MihaiLazar,DominiquePlanson,PierreBrosselard,JawadulHassan,AnneHenry,ErikJanzen,BertrandVergne,SigoScharnholz,600VPiNdiodesfabricatedusingon-axis4Hsiliconcarbide,MaterialsScienceForum,2012,(717-720),969-972.
V.Ivady,B.Somogyi,V.Zolyomi,AndreasGällström,N.T.Son,ErikJanzen,AdamGali,TransitionMetalDefectsinCubicandHexagonalPolytypesofSiC:SiteSelection,MagneticandOpticalPropertiesfromabinitioCalculations,MaterialsScienceForum,2012,(717-720),205-210.
L.Lilja,Jawadul-Hassan,IanD.Booker,J.P.Bergman,ErikJanzen,TheEffectofGrowthConditionsonCarrierLifetimeinn-type4H-SiCEpitaxialLayers,MaterialsScienceForum,2012,(717-720),161-164.
SivaKotamraju,BharatKrishnan,FranziskaC.Beyer,AnneHenry,OlleKordina,ErikJanzen,YaroslavKoshka,Electricalandopticalpropertiesofhigh-purityepilayersgrownbythelow-temperaturechloro-carbongrowthmethod,MaterialsScienceForum,2012,(717-720),129-132.
tHIn FIlM pHysIcs Agnė Žukauskaitė,ChristopherTholander,JustinasPališaitis,PerO.Å.Persson,VanyaDarakchieva,NebihaBenSedrine,FerencTasnádi,BjörnAlling,JensBirch,LarsHultman,YxAl1-xNThinFilms,JournalofPhysicsD,2012,(45),42,422001.
HenrikPedersen,CarinaHöglund,JensBirch,JensJensen,AnneHenry,LowTemperatureCVDofThin,AmorphousBoron-CarbonFilmsforNeutronDetectors,ChemicalVaporDeposition,2012,(18),7-9,221-224.
CeciliaGoyenola,SvenStafström,LarsHultman,GueorguiKostovGueorguiev,StructuralPatternsArisingduringSyntheticGrowthofFullerene-LikeSulfocarbide,TheJournalofPhysicalChemistryC,2012,(116),39,21124-21131.
Ph.D.:MuhammadJunaid,MagnetronSputterEpitaxyofGaNEpilayersandNanorods,2012.
Lic:SteffenSønderby,PhysicalVaporDepositionofYttria-StabilizedZirconiaandGadolinia-DopedCeriaThinFilmsforFuelCellApplications,2012.
RenatoB.dosSantos,RobertoRivelino,FernandodeB.Mota,GueorguiKostovGueorguiev,ExploringHydrogenationandFluorinationinCurved2DCarbonSystems:ADensityFunctionalTheoryStudyonCorannulene,JournalofPhysicalChemistryA,2012,(116),36,9080-9087.
Conference:AliKhatibi,Face-CenteredCubicandcorundum(Al1-xCrx)2O3ThinFilms:Deposition,Characterization,andHeatTreatmentStudies,2012.
Ph.D.:LarsJohnson,InsideTheMiscibilityGap:NanostructuringandPhaseTrans-formationsinHardNitrideCoatings,2012.
CarlJunesand,ChenHu,ZhechaoWang,WondwosenMetaferia,PriteshDagur,GaliaPozina,LarsHultman,SebastianLourdudoss,EffectoftheSurfaceMorphologyofSeedandMaskLayersonInPGrownonSibyEpitaxialLateralOvergrowth,JournalofElectronicMaterials,2012,(41),9,2345-2349.
TJLawton,VPushkarev,EstebanBroitman,AReinicker,ECHSykes,AJGellman,InitialOxidationofCu(hkl)SurfacesVicinaltoCu(111):AHigh-ThroughputStudyofStructureSensitivity,TheJournalofPhysicalChemistryC,2012,(116),30,16054-16062.
JonasLauridsen,NNedfors,UJansson,JensJensen,PerEklund,LarsHultman,Ti-B-Cnanocompositecoatingsdepositedbymagnetronsputtering,AppliedSurfaceScience,2012,(258),24,9907-9912.
SusannSchmidt,ZsCzigany,GrzegorzGreczynski,JensJensen,LarsHultman,IonmassspectrometryinvestigationsofthedischargeduringreactivehighpowerpulsedanddirectcurrentmagnetronsputteringofcarboninArandAr/N-2,JournalofAppliedPhysics,2012,(112),1,013305.
Lic:HannaFager,GrowthandCharacterizationofAmorphousTiAlSiNandHfAlSiNThinFilms,2012.
PerEklund,MartinDahlqvist,OlofTengstrand,LarsHultman,JunLu,NilsNedfors,UlfJansson,JohannaRosén,DiscoveryoftheTernaryNanolaminatedCompoundNb2GeCbyaSystematicTheoretical-ExperimentalApproach,PhysicalReviewLetters,2012,(109),3,035502.
NinaJLane,MichaelNaguib,VolkerPresser,GillesHug,LarsHultman,MichelWBarsoum,First-orderRamanscatteringoftheMAXphasesTa4AlC3,Nb4AlC3,Ti4AlN3,andTa2AlC,JournalofRamanSpectroscopy,2012,(43),7,954-958.
CarinaHöglund,JensBirch,KenAndersen,ThierryBigault,Jean-ClaudeBuffet,JonathanCorrea,PatrickvanEsch,BrunoGuerard,RichardHall-Wilton,JensJensen,AntonKhaplanov,FrancescoPiscitelli,ChristianVettier,WilhelmusVollenberg,LarsHultman,B4Cthinfilmsforneutrondetection,JournalofAppliedPhysics,2012,(111),10,104908.
NinaJ.Lane,MichaelNaguib,JunLu,LarsHultman,MichelW.Barsoum,StructureofanewbulkTi5Al2C3MAXphaseproducedbythetopotactictransformationofTi2AlC,JournaloftheEuropeanCeramicSociety,2012,(32),12,3485-3491.
VolodymyrKhranovskyy,TobiasEkblad,RositsaYakimova,LarsHultman,Surfacemorphologyeffectsonthelight-controlledwettabilityofZnOnanostructures,AppliedSurfaceScience,2012,(258),20,8146-8152.
Conference:M.Asghar,F.Iqbal,SadiaMunichaFaraz,ValdasJokubavicius,QamarWahab,MikaelSyväjärvi,Studyofdeepleveldefectsindopedandsemi-insulatingn-6H-SiCepilayersgrownbysublimationmethod,2012.
Conference:M.Asghar,F.Iqbal,SadiaFaraz,ValdasJokubavicius,QamarWahab,MikaelSyväjärvi,Characterizationofdeepleveldefectsinsublimationgrownp-type6H-SiCepilayersbydeepleveltransientspectroscopy,2012.
FridrikMagnus,ArniSigurdurIngason,SveinnOlafsson,JonT.Gudmundsson,NucleationandResistivityofUltrathinTiNFilmsGrownbyHigh-PowerImpulseMagnetronSputtering,IEEEElectronDeviceLetters,2012,(33),7,1045-1047.
HenrikPedersen,MikhailChubarov,HansHögberg,JensJensen,AnneHenry,Ontheeffectofwaterandoxygeninchemicalvapordepositionofboronnitride,ThinSolidFilms,2012,(520),18,5889-5893.
SteffenSønderby,A.J.Nielsen,B.H.Christensen,K.P.Almtoft,JunLu,JensJensen,L.P.Nielsen,PerEklund,Reactivemagnetronsputteringofuniformyttria-stabilizedzirconiacoatingsinanindustrialsetup,Surface&CoatingsTechnology,2012,(206),19-20,4126-4131.
104 IFM actIvIty report 2012
GrzegorzGreczynski,JunLu,M.P.Johansson,JensJensen,IvanPetrov,JosephEGreene,LarsHultman,RoleofTin+andAln+ionirradiation(n=1,2)duringTi1-xAlxNalloyfilmgrowthinahybridHIPIMS/magnetronmode,Surface&CoatingsTechnology,2012,(206),19-20,4202-4211.
MilenaBeshkova,JensBirch,MikaelSyväjärvi,RositsaYakimova,Sublimationepitaxyof3C-SiCgrownatSi-andC-richconditions,Vacuum,2012,(86),10,1595-1599.
AndersLundskog,JustinasPalisaitis,Chih-WeiHsu,MartinEriksson,LarsHultman,PerPersson,UrbanForsberg,Per-OlofHoltz,ErikJanzén,InGaNquantumdotformationmechanismonhexagonalGaN/InGaN/GaNpyramids,Nanotechnology,2012,(23),30,305708.
MikhailChubarov,HenrikPedersen,HansHögberg,JensJensen,AnneHenry,GrowthofHighQualityEpitaxialRhombohedralBoronNitride,CrystalGrowth&Design,2012,(12),6,3215-3220.
BjörnAlling,PeterSteneget,ChristopherTholander,FerencTasnádi,IvanPetrov,JosephEGreene,LarsHultman,ConfigurationaldisordereffectsonadatommobilitiesonTi1-xAlxN(001)surfacesfromfirstprinciples,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),24,245422.
PauloV.C.Medeiros,GueorguiKostovGueorguiev,SvenStafström,Benzene,coronene,andcircumcoroneneadsorbedongold,andagoldclusteradsorbedongraphene:Structuralandelectronicproperties,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),20,205423.
Lic:AurelijaMockutė,ThinFilmSynthesisandCharacterizationofNewMAXPhaseAlloys,2012.
ThierryCabioch,PerEklund,VincentMauchamp,MichelJaouen,StructuralinvestigationofsubstoichiometryandsolidsolutioneffectsinTi2Al(C-x,N1-x)(y)compounds,JournaloftheEuropeanCeramicSociety,2012,(32),8,1803-1811.
MartinMagnuson,MaurizioMattesini,NgoVanNong,PerEklund,LarsHultman,Electronic-structureoriginoftheanisotropicthermopowerofnanolaminatedTi3SiC2determinedbypolarizedx-rayspectroscopyandSeebeckmeasurements,PhysicalReviewBCondensedMatter,2012,(85),195134.
MartinMagnuson,MatildaAndersson,JunLu,LarsHultman,UlfJansson,ElectronicStructureandChemicalBondingofAmorphousChromiumCarbideThinFilms,JournalofPhysics,2012,(24),225004.
Lic:SimonOlsson,ApproximantPhasesinQuasicrystallineAlCuFeThinFilms,2012.
LarsJohnson,MattiasThuvander,KrystynaStiller,MagnusOdén,LarsHultman,SpinodaldecompositionofTi0.33Al0.67Nthinfilmsstudiedbyatomprobetomography,ThinSolidFilms,2012,(520),13,4362-4368.
DavideSangiovanni,ValeriuChirita,LarsHultman,ToughnessenhancementinTiAlN-basedquarternaryalloys,ThinSolidFilms,2012,(520),11,4080-4088.
KristinaBuchholt,PerEklund,JensJensen,JunLu,RGhandi,MDomeij,CMZetterling,GBehan,HZhang,AnitaLloydSpetz,LarsHultman,GrowthandcharacterizationofepitaxialTi3GeC2thinfilmson4H-SiC(0001),JournalofCrystalGrowth,2012,(343),1,133-137.
GrzegorzGreczynski,JunLu,MJohansson,JensJensen,IvanPetrov,JosephEGreene,LarsHultman,SelectionofmetalionirradiationforcontrollingTi1-xAlxNalloygrowthviahybridHIPIMS/magnetronco-sputtering,Vacuum,2012,(86),8,1036-1040.
LarsHultman,Editorial,Vacuum,2012,(86),8,1013-1013.
JonasLauridsen,PerEklund,JunLu,AKnutsson,AMAndersson,LarsHultman,MagnusOdén,MicrostructuralandChemicalAnalysisofAgICoatingsUsedasaSolidLubricantinElectricalSlidingContacts,Tribologyletters,2012,(46),2,187-193.
YiyuOu,ValdasJokubavicius,PhilipHens,MichlKaiser,PeterWellmann,RositsaYakimova,MikaelSyväjärvi,HaiyanOu,BroadbandandomnidirectionallightharvestingenhancementoffluorescentSiC,OpticsExpress,2012,(20),7,7575-7579.
AliKhatibi,JunLu,JensJensen,PerEklund,LarsHultman,Phasetransformationsinfacecenteredcubic(Al0.32Cr0.68)(2)O-3thinfilms,Surface&CoatingsTechnology,2012,(206),14,3216-3222.
Lic:AgnėŽukauskaitė,MetastableYAlNandScAlNthinfilms:growthandcharacterization,2012.
AgnėŽukauskaitė,GunillaWingqvist,JustinasPališaitis,JensJensen,PerO.Å.Persson,RaminMatloub,PaulMuralt,YunseokKim,JensBirch,LarsHultman,MicrostructureandDielectricPropertiesofPiezoelectricMagnetronSputteredw-Sc<sub>x</sub>Al<sub>1-x</sub>Nthinfilms,JournalofAppliedPhysics,2012,(111),9,093527.
TobiasMarten,BjörnAlling,EyvasIsaev,HansLind,FerencTasnadi,LarsHultman,IgorAbrikosov,First-principlesstudyoftheSiNx/TiN(001)interface,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),10,104106.
MichaelNaguib,OlhaMashtalir,JoshuaCarle,VolkerPresser,JunLu,LarsHultman,YuryGogotsi,MichelWBarsoum,Two-DimensionalTransitionMetalCarbides,ACSNano,2012,(6),2,1322-1331.
YiyuOu,ValdasJokubavicius,MargaretaLinnarsson,RositzaYakimova,MikaelSyväjärvi,HaiyanOu,Characterizationofdonor–acceptor-pairemissioninfluorescent6H-SiC,PhysicaScripta,2012,(T148),014003.
MikaelSyväjärvi,J.Müller,JianwuSun,VytautasGrivickas,YiyuOu,ValdasJokubavicius,PhilipHens,M.Kaisr,KanaparinAriyawong,K.Gulbinas,RickardLiljedahl,M.K.Linnarsson,S.Kamiyama,P.Wellmann,E.Spiecker,H.Ou,FluorescentSiCasanewmaterialforwhiteLEDs,Physicascripta.T,2012,(T148),014002.
Lic:SergeyKhromov,TheEffectofMgDopingonOpticalandStructuralPropertiesofGaN,2012.
SergeyKhromov,BoMonemar,V.Avrutin,XingLi,H.Morkoç,LarsHultman,GaliaPozina,Opticalandstructuralstudiesofhomoepitaxiallygrownm-planeGaN,AppliedPhysicsLetters,2012,(100),17,172108.
LinaRogström,JenniferUllbrand,J.Almer,LarsHultman,B.Jansson,MagnusOdén,StrainevolutionduringspinodaldecompositionofTiAlNthinfilms,ThinSolidFilms,2012,(520),17,5542-5549.
LinaRogström,NaureenGhafoor,MatsAhlgren,MagnusOdén,Auto-organizingZrAlN/ZrAlTiN/TiNmultilayers,ThinSolidFilms,2012,(520),21,6451-6454.
LinaRogström,MatsJohansson,NaureenGhafoor,LarsHultman,MagnusOdén,InfluenceofchemicalcompositionanddepositionconditionsonmicrostructureevolutionduringannealingofarcevaporatedZrAlNthinfilms,JournalofVacuumScience&Technology.A.Vacuum,Surfaces,andFilms,2012,(30),3,031504.
Lic:SusannSchmidt,CarbonbasedThinFilmsPreparedbyHiPIMSandDCMS,2012.
ChaoXia,SomsakulWatcharinyanon,AAZakharov,RositsaYakimova,LarsHultman,LeifIJohansson,ChariyaVirojanadara,Siintercalation/deintercalationofgrapheneon6H-SiC(0001),PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),4,045418.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 105
pU
Bli
ca
tiO
ns
& t
he
se
s
J.W.Sun,VolodymyrKhranovskyy,MMexis,MEriksson,MikaelSyväjärvi,ITsiaoussis,GholamrezaYazdi,HPeyre,SJuillaguet,JCamassel,Per-OlofHoltz,PederBergman,LarsHultman,RositsaYakimova,Comparativemicro-photoluminescenceinvestigationofZnOhexagonalnanopillarsandtheseedinglayergrownon4H-SiC,JournalofLuminescence,2012,(132),1,122-127.
JonasLauridsen,PerEklund,JensJensen,A.Furlan,A.Flink,A.M.Andersson,U.Jansson,LarsHultman,EffectsofA-elements(A=Si,GeorSn)onthestructureandelectricalcontactpropertiesofTi-A-C-Agnanocomposites,ThinSolidFilms,2012,(520),16,5128-5136.
MengyaoXie,FerencTasnadi,IgorAbrikosov,LarsHultman,VanyaDarakchieva,Elasticconstants,composition,andpiezolectricpolarizationinInxAl1-xN:FromabinitiocalculationstoexperimentalimplicationsfortheapplicabilityofVegardsrule,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),15,155310.
MattiasSamuelsson,KostasSarakinos,HansHögberg,ErikLewin,UlfJansson,BengtWälivaara,HenrikLjungcrantz,UlfHelmersson,GrowthofTiC/a-C:Hnanocompositefilmsbyreactivehighpowerimpulsemagnetronsputteringunderindustrialconditions,Surface&CoatingsTechnology,2012,(206),8-9,2396-2402.
NiklasGunnarssonSarius,JonasLauridsen,E.Lewin,U.Jansson,HansHögberg,Å.Öberg,P.Leisner,PerEklund,LarsHultman,ContactresistanceofTi-Si-C-AgandTi-Si-C-Ag-Pdnanocompositecoatings,JournalofElectronicMaterials,2012,(41),3,560-567.
NiklasGunnarssonSarius,JonasLauridsen,E.Lewin,JunLu,HansHögberg,Å.Öberg,H.Ljungcrantz,P.Leisner,PerEklund,LarsHultman,NiandTidiffusionbarrierlayersbetweenTi-Si-C-AgnanocompositecoatingsandCu-basedsubstrates,Surface&CoatingsTechnology,2012,(206),8-9,2558-2565.
Lic:OlofTengstrand,Me-Si-C(Me=Nb,TiorZr):NanocompositeandAmorphousThinFilms,2012.
Other:OlofTengstrand,NilsNedfors,UlfJansson,AxelFlink,PerEklund,LarsHultman,IncorporationeffectsofSiinTiCxthinfilms,2012.
Other:OlofTengstrand,NilsNedfors,M.Andersson,JunLu,UlfJansson,AxelFlink,PerEklund,LarsHultman,Beam-inducedcrystallizationofMe-Si-C(Me=NborZr)thinfilmsduringtransmissionelectronmicroscopy,2012.
NinaJLane,MichaelNaguib,JunLu,PerEklund,LarsHultman,MichelWBarsoum,Commenton”Ti5Al2C3:ANewTernaryCarbideBelongingtoMAXPhasesintheTi-Al-CSystem”,JournalofTheAmericanCeramicSociety,2012,(95),10,3352-3354.
Ph.D.:JustinasPališaitis,ValenceElectronEnergyLossSpectroscopyofIII-NitrideSemiconductors,2012.
Other:Ching-LienHsiao,RogerMagnusson,JustinasPalisaitis,PerSandström,SergiyValyukh,PerPersson,LarsHultman,KennethJärrendahl,JensBirch,Curved-latticeepitaxialgrowthofchiralAlInNtwistednanorodsforopticalapplications,2012.
Other:JustinasPalisaitis,AndersLundskog,UrbanForsberg,ErikJanzén,JensBirch,LarsHultman,PerPersson,CharacterizationofInGaN/GaNquantumwellgrowthusingmonochromatedvalenceelectronenergylossspectroscopy,2012.
Other:JustinasPalisaitis,Ching-LienHsiao,LarsHultman,JensBirch,PerPersson,ThermalstabilityofAl1-xInxN(0001)throughoutthecompositionalrangeasinvestigatedduringin-situthermalannealinginascanningtransmissionelectronmicroscope,2012.
Other:JustinasPalisaitis,Ching-LienHsiao,LarsHultman,JensBirch,PerPersson,SpinodaldecompositionofAl0.3In0.7N(0001)layersfollowing in-situthermalannealingasinvestigatedbySTEM-VEELS,2012.
Lic:SitKerdsongpanya,ScandiumNitrideThinFilmsforThermoelectrics,2012.
Conference:KennethJärrendahl,JensBirch,RogerMagnusson,Ching-LienHsiao,PerSandström,TorunBerlind,JohanL.I.Gustafson,LiaFernándezdelRío,JanLandin,HansArwin,PolarizationofLightReflectedfromChiralStructures-CalculationsComparedwithMuellerMatrixEllipsometryMeasurementsonNaturalandSyntheticSamples,2012.
JianwuSun,ValdasJokubavicius,RickardLiljedahl,RositsaYakimova,S.Juillaguet,J.Camassel,S.Kamiyama,MikaelSyväjärvi,RoomtemperatureluminescencepropertiesoffluorescentSiCaswhitelightemittingdiodemedium,ThinSolidFilms,2012,(522),33-35.DavideSangiovanni,DanielEdström,LarsHultman,ValeriuChirita,IvanPetrov,JosephEGreene,DynamicsofTi,N,andTiNx(x=1-3)admoleculetransportonTiN(001)surfaces,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),15,155443.
Other:AndersEriksson,IgorZhirkov,MartinDahlqvist,JensJensen,LarsHultman,JohannaRosén,CharacterizationofPlasmaChemistryandIonEnergyinCathodicArcPlasmafromTi-SiCathodesofDifferentComposition,2012.
Other:AndersEriksson,JunLu,OlofTengstrand,JensJensen,PerEklund,JohannaRosén,LarsHultman,NanocolumnarEpitaxialTi1-xSixN(0≤x≤0.18)ThinFilmsGrownbyDualReactiveMagnetronSputteringonMgO(001),(011),and(111)Substrates,2012.
Other:AndersEriksson,S.Mráz,JensJensen,LarsHultman,J.M.Schneider,JohannaRosén,InfluenceofArandN2PressureonPlasmaChemistry,IonEnergy,andThinFilmCompositionduringFilteredArcDepositionfromTi3SiC2Cathodes,2012.
AndersEriksson,NaureenGhafoor,JensJensen,Lars-ÅkeNäslund,MatsJohansson,J.Sjölen,MagnusOdén,LarsHultman,JohannaRosén,ArcdepositionofTi–Si–C–Nthinfilmsfrombinaryandternarycathodes—ComparingsourcesofC,Surface&CoatingsTechnology,2012,(213),145-154.
HenrikPedersen,PetterLarsson,AsimAijaz,JensJensen,DanielLundin,Anovelhigh-powerpulsePECVDmethod,Surface&CoatingsTechnology,2012,(206),22,4562-4566.
Conference:HansArwin,TorunBerlind,JensBirch,LiaFernándezdelRío,JohanGustafson,JanLandin,RogerMagnusson,ChristinaÅkerlind,KennethJärrendahl,PolarizationeffectsinreflectionfromthecuticleofscarabbeetlesstudiedbyspectroscopicMueller-matrixellipsometry,AES2012,AdvancedElectromagneticsSymposium,2012.
Ching-LienHsiao,JustinasPalisaitis,MuhammadJunaid,PerOAPersson,JensJensen,QingxiangZhao,LarsHultman,Li-ChyongChen,Kuei-HsienChen,JensBirch,Room-temperatureheteroepitaxyofsingle-phaseAl1-xInxNfilmswithfullcompositionrangeonisostructuralwurtzitetemplates,ThinSolidFilms,2012,(524),113-120.KimleangKhun,ZafarHussainIbupoto,JunLu,M.S.AlSalhi,M.Atif,AneesA.Ansari,MagnusWillander,Potentiometricglucosesensorbasedontheglucoseoxidaseimmobilizedironferritemagneticparticle/chitosancompositemodifiedgoldcoatedglasselectrode,Sensorsandactuators.B,Chemical,2012,(173),698-703.
106 IFM actIvIty report 2012
NinaJ.Lane,SvenC.Vogel,GillesHug,AtsushiTogo,LaurentChaput,LarsHultman,MichelW.Barsoum,Neutrondiffractionmeasurementsandfirst-principlesstudyofthermalmotionofatomsinselectM(n+1)AX(n)andbinaryMXtransition-metalcarbidephases,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),21.
EstebanBroitman,LarsHultman,Adhesionimprovementofcarbon-basedcoatingsthroughahighionizationdepositiontechnique,JournalofPhysics,ConferenceSeries,2012,(370).
Conference:AliKhatibi,PhaseTransformationsinFaceCenteredCubic(Al,Cr)2O3ThinFilms,2012.
AliKhatibi,J.Sjolen,GrzegorzGreczynski,JensJensen,PerEklund,LarsHultman,StructuralandmechanicalpropertiesofCr-Al-O-Nthinfilmsgrownbycathodicarcdeposition,ActaMaterialia,2012,(60),19,6494-6507.
SitKerdsongpanya,BjörnAlling,PerEklund,EffectofpointdefectsontheelectronicdensityofstatesofScNstudiedbyfirst-principlescalculationsandimplicationsforthermoelectricproperties,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),19.
KuoChieh-Yi,GaliaPozina,FabricationandOpticalPropertiesofZnONanocrystal/GaNQuantumWellBasedHybridStructures,2012.
PeterCarlsson,PerEklund,MarcelaBilek,DavidMcKenzie,JohannaRosén,CombinatorialThinFilmSynthesisofCr2AlC;aComparisonofTwoSputteringMethods,2012.
Conference:RuthPearce,RositsaYakimova,JohanEriksson,LarsHultman,MikeAndersson,AnitaLloydSpetz,DevelopmentofFETsandresistivedevicesbasedonepitaxiallygrownsinglelayergrapheneonSiCforhighlysensitivegasdetection,MaterialsScienceForumVols717-720,2012.
RikardForsén,MatsJohansson,MagnusOdén,NaureenGhafoor,DecompositionandphasetransformationinTiCrAlNthincoatings,JournalofVacuumScience&Technology.A.Vacuum,Surfaces,andFilms,2012,(30),6.
E.F.deAlmeidaJunior,F.deBritoMota,C.M.C.deCastilho,AneliaKakanakova-Gueorgieva,GueorguiKostovGueorguiev,Defectsinhexagonal-AlNsheetsbyfirst-principlescalculations,EuropeanPhysicalJournalB,2012,(85),1,.
GrzegorzGreczynski,JunLu,JensJensen,IvanPetrov,JosephE.Greene,StephanBolz,WernerKoelker,ChristophSchiffers,OliverLemmer,LarsHultman,Metalversusrare-gasionirradiationduringTi1-xAlxNfilmgrowthbyhybridhighpowerpulsedmagnetron/dcmagnetronco-sputteringusingsynchronizedpulsedsubstratebias,JournalofVacuumScience&Technology.A.Vacuum,Surfaces,andFilms,2012,(30),6.
EstebanBroitman,CBojorge,FElhordoy,V.Kent,GZaniniGadioli,R.Marotti,HCanepa,Comparative study on the properties of ZnO nanowires and nanocrystalline thin films,SurfaceandCoatingsTechnology,2012,(213),59-64.
JDeBona,SLaino,VPettarin,EstebanBroitman,RDommarco,PFrontini,Differences in the Sliding Wear Track Patterns Between UHMWPE/Steel and UHMWPE/CNx Pairs,ProcediaMaterialsScience,2012,(1),329-336.
JMiller,TAshok,SLee,EstebanBroitman,Zinc oxide-based thin film functional layers for chemiresistive sensors,ThinSolidFilms,2012,(520),6669-6676.
MSoomro,IHussain,NBano,EstebanBroitman,ONur,MWillander,Nanoscale elastic modulus of single horizontal ZnO nanorod using nanoindentation experiment,NanoscaleResearchLetters,2012,(7),146-148.
AhmedZainelabdin,GulAmin,SiamaZaman,OmerNur,JunLu,LarsHultman,MagnusWillander,CuO/ZnONanocoralssynthesisviahydrothermaltechnique:growthmechanismandtheirapplicationasHumiditySensor,JournalofMaterialsChemistry,2012,(22),23,11583-11590.
LinaRogström,MatsAhlgren,J.Almer,LarsHultman,MagnusOdén,PhasetransformationsinnanocompositeZrAlNthinfilmsduringannealing,JournalofMaterialsResearch,2012,(27),13,1716-1724.
EstebanBroitman,AndrejFurlan,G.K.Geuorguiev,ZsoltCzigany,HansHögberg,LarsHultman,StructuralandMechanicalPropertiesofCNxandCPxThinSolidFilms,KeyEngineeringMaterials,2012,(488-489),581-584.
scIentIFIc brancH oFtHeory and ModelIng
bIoInForMatIcs ErikNordling,MirnaAbraham-Nordling,Colonicamyloidosis,computationalanalysisofthemajoramyloidogenicspecies,SerumAmyloidA,Computationalbiologyandchemistry(Print),2012,(39),29-34.
CeciliaAndrésen,SaraHelander,AlexanderLemak,ChristopheFares,VeronikaCsizmok,JonasCarlsson,LindaZPenn,JulieDForman-Kay,CherylHArrowsmith,PatrikLundström,MariaSunnerhagen,Transientstructureanddynamicsinthedisorderedc-MyctransactivationdomainaffectBin1binding,NucleicAcidsResearch,2012,(40),13,6353-6366.
DavidBzhalava,JohannaEkström,FredrikLysholm,EmilieHultin,HelenaFaust,BengtPersson,MattiLehtinen,Ethel-MicheledeVilliers,JoakimDillner,PhylogeneticallydiverseTTvirusviremiaamongpregnantwomen,Virology,2012,(432),2,427-434.
KristinaMelkersson,BengtPersson,Evidenceforanegativeassociationbetweenschizophreniaandapolymorphismintheinsulinreceptorsubstrate-3(IRS-3)gene,Neuro-endocrinologyletters,2012,(33),3,321-330.
UlrikeHenrion,JakobRenhorn,SaraBörjesson,ErinMNelson,ChristineSSchwaiger,ParBjelkmar,BjörnWallner,ErikLindahl,FredrikElinder,Trackingacompletevoltage-sensorcyclewithmetal-ionbridges,ProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica,2012,(109),22,8552-8557.
ChristineSSchwaiger,SaraBörjesson,BerkHess,BjörnWallner,FredrikElinder,ErikLindahl,TheFreeEnergyBarrierforArginineGatingChargeTranslationIsAlteredbyMutationsintheVoltageSensorDomain,PLoSONE,2012,(7),10,.
YvonneKallberg,ÅsaSegerstolpe,FredrikLackman,BengtPersson,LarsWieslander,EvolutionaryConservationoftheRibosomalBiogenesisFactorRbm19/Mrd1:ImplicationsforFunction,PLoSONE,2012,(7),9,.
FredrikLysholm,AnnaWetterbom,CeciliaLindau,HamidDarban,AnnelieBjerkner,KristinaFahlander,AMichaelLindberg,BengtPersson,TobiasAllander,BjornAndersson,CharacterizationoftheViralMicrobiomeinPatientswithSevereLowerRespiratoryTractInfections,UsingMetagenomicSequencing,PLoSONE,2012,(7),2.
pU
Bli
ca
tiO
ns
& t
he
se
s
IFM actIvIty report 2012 107
pU
Bli
ca
tiO
ns
& t
he
se
s
FredrikLysholm,Highlyimprovedhomopolymerawarenucleotideproteinalignmentswith454data,BMCBioinformatics,2012,(13),.
Chapter:JonasCarlsson,BengtPersson,Investigatingproteinvariantsusingstructuralcalculationtechniques,HomologyModeling,2012,313-330.
Chapter:ThabitAl-Absi,FredrikLysholm,BengtPersson,EfficientCharacterizationofShortAnellovirusesFragmentsFoundinMetagenomicSamples,2012,.
coMpUtatIonal pHysIcs BelenNieto-Ortega,FranciscoJRamirez,DavidBAmabilino,MathieuLinares,DavidBeljonne,JuanTLopezNavarrete,JuanCasado,Electronicandvibrationalcirculardichroismspectroscopiesfortheunderstandingofchiralorganizationinporphyrinaggregates,ChemicalCommunications,2012,(48),73,9147-9149.
CeciliaGoyenola,SvenStafström,LarsHultman,GueorguiKostovGueorguiev,StructuralPatternsArisingduringSyntheticGrowthofFullerene-LikeSulfocarbide,TheJournalofPhysicalChemistryC,2012,(116),39,21124-21131.
WAAl-Saidi,SanfordAAsher,PatrickNorman,ResonanceRamanSpectraofTNTandRDXUsingVibronicTheory,Excited-StateGradient,andComplexPolarizabilityApproximations,JournalofPhysicalChemistryA,2012,(116),30,7862-7872.
MariaAhrén,LinnéaSelegård,FredrikSöderlind,MathieuLinares,JoannaKauczor,PatrickNorman,Per-OlovKäll,KajsaUvdal,Asimplepolyol-freesynthesisroutetoGd2O3nanoparticlesforMRIapplications:anexperimentalandtheoreticalstudy,Journalofnanoparticleresearch,2012,(14),8.
ZhenSun,SvenStafström,Spin-dependentpolaronrecombinationinconjugatedpolymers,JournalofChemicalPhysics,2012,(136),24,244901.
MalinUppsten,BoDurbeej,Quantumchemicalcomparisonofvertical,adiabatic,and0-0excitationenergies:ThePYPandGFPchromophores,JournalofComputationalChemistry,2012,(33),23,1892-1901.
PauloV.C.Medeiros,GueorguiKostovGueorguiev,SvenStafström,Benzene,coronene,andcircumcoroneneadsorbedongold,andagoldclusteradsorbedongraphene:Structuralandelectronicproperties,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),20,205423.
JonasHådén,MathieuLinares,PatrickNorman,TheoreticalstudyoforientationsofbiofunctionalizedthiolatesonAu(111)surface,2012.
ElhamMozafari,SvenStafström,Polaronstabilityinmolecularcrystals,PhysicsLettersA,2012,(376),22,1807-1811.
GuominJi,YuqingXu,BinCui,Chang-fengFang,XiangruKong,DongmeiLi,DeshengLiu,RectifyingbehaviorsofanAu/(C-20)(2)/Aumoleculardeviceinducedbythedifferentpositionsofgatevoltage,RSCADVANCES,2012,(2),30,11349-11353.
MaijaHonkela,JonasBjörk,MatsPersson,ComputationalstudyoftheadsorptionanddissociationofphenolonPtandRhsurfaces,PhysicalChemistry,ChemicalPhysics-PCCP,2012,(14),16,5849-5854.
Yi-QiZhang,NenadKepčija,MartinKleinschrodt,KatharinaDiller,SybilleFischer,AnthoulaC.Papageorgiou,FrancescoAllegretti,JonasBjörk,SvetlanaKlyatskaya,FlorianKlappenberger,MarioRuben,JohannesV.Barth,Homo-couplingofterminalalkynesonanoblemetalsurface,NatureCommunications,2012,(3),
tHeoretIcal bIology FridaLögdberg,UnoWennergren,SpectralColor,SynchronyandExtinctionRisk,THEORETICALECOLOGY,2012,(5),4,545-554.
AnnaEklöf,LindaKaneryd,PeterMünger,Climatechangeinmetacommunities:dispersalgivesdouble-sidedeffectsonpersistence,PhilosphicalTransactionsoftheRoyalSocietyB,2012,(367),1605,2945-2954.
JennyFrossling,AnnaOhlson,CamillaBjorkman,NinaHåkansson,MariaNoremark,Applicationofnetworkanalysisparametersinrisk-basedsurveillance-ExamplesbasedoncattletradedataandbovineinfectionsinSweden,PreventiveVeterinaryMedicine,2012,(105),3,202-208.
TomLindström,SusannaSternbergLewerin,UnoWennergren,Influenceondiseasespreaddynamicsofherdcharacteristicsinastructuredlivestockindustry,JournaloftheRoyalSocietyInterface,2012,(9),71,1287-1294.
Ph.D.:MalinSetzer,ThedeclineofgreatArcticcharrinLakeVättern:empiricalandtheoreticalanalysesofsuggestedcauses,2012.
Ph.D.:NinaHåkansson,Networkanalysisandoptimizationofanimaltransports,2012.
JennyLennartsson,NinaHåkansson,UnoWennergren,A.Jonsson,SpecNet:aspatialnetworkalgorithmthatgeneratesawiderangeofspecificstructures,PLoSONE,2012,(7),8,.
SoniaCoriani,ThomasFransson,OveChristiansen,PatrickNorman,Asymmetric-Lanczos-Chain-DrivenImplementationofElectronicResonanceConvergentCoupled-ClusterLinearResponseTheory,JournalofChemicalTheoryandComputation,2012,(8),5,1616-1628.
ZsoltSzekrényes,KatalinKamarás,GyörgyTarczay,AnnaLlanes-Pallás,TomasMarangoni,MaurizioPrato,DavideBonifazi,JonasBjörk,FelixHanke,MatsPersson,MeltingofHydrogenBondsinUracilDerivativesProbedbyInfraredSpectroscopyandabInitioMolecularDynamics,TheJournalofPhysicalChemistryB,2012,(116),15,4626-4633.
PatrickNorman,HansJorgenAaJensen,Phosphorescenceparametersforplatinum(II)organometallicchromophores:Astudyatthenon-collinearfour-componentKohn-Shamleveloftheory,ChemicalPhysicsLetters,2012,(531),229-235.
DenisBucher,GregoryMSandala,BoDurbeej,LeoRadom,DavidMSmith,Theelusive5’-deoxyadenosylradicalincoenzyme-B12-mediatedreactions,JournaloftheAmericanChemicalSociety,2012,(134),3,1591-1599.
SoniaCoriani,OveChristiansen,ThomasFransson,PatrickNorman,Coupled-clusterresponsetheoryfornear-edgex-ray-absorptionfinestructureofatomsandmolecules,PhysicalReviewA.Atomic,Molecular,andOpticalPhysics,2012,(85),2,022507.
Lic:JonasSjöqvist,Luminescencepropertiesofflexibleconjugateddyes,2012.
CeciliaVahlberg,MathieuLinares,PatrickNorman,KajsaUvdal,PhenylboronicEster-andPhenylboronicAcid-TerminatedAlkanethiolsonGoldSurfaces,TheJournalofPhysicalChemistryC,2012,(116),1,796-806.
Ph.D.:MattiasJakobsson,MonteCarloStudiesofChargeTransportBelowtheMobilityEdge,2012.
MattiasJakobsson,MathieuLinares,SvenStafström,MonteCarlosimulationsofchargetransportinorganicsystemswithtrueoff-diagonaldisorder,JournalofChemicalPhysics,2012,(137),11,.
DavidSulzer,PatrickNorman,TrondSaue,AtomicC-6dispersioncoefficients:afour-componentrelativisticKohn-Shamstudy,MolecularPhysics,2012,(110),19-20,2535-2541.
FelixHanke,MatthewS.Dyer,JonasBjörk,MatsPersson,Structureandstabilityofweaklychemisorbedetheneadsorbedonlow-indexCusurfaces:performanceofdensityfunctionalswithvanderWaalsinteractions,JournalofPhysics,2012,(42),424217-424225.
108 IFM actIvIty report 2012
Ph.D.:LindaKaneryd,Dynamicsofecologicalcommunitiesinvariableenvironments:localandspatialprocesses,2012.
Ph.D.:FridaLögdberg,Populationdynamicsinvariableenvironments–impactsofnoisecolourandsynchrony,2012.
LindaKaneryd,CharlotteBorrvall,SofiaBerg,AlvaCurtsdotter,AnnaEklöf,CelineHauzy,TomasJonsson,PeterMünger,MalinSetzer,TorbjörnSäterberg,BoEbenman,Species-richecosystemsarevulnerabletocascadingextinctionsinanincreasinglyvariableworld,ECOLOGYANDEVOLUTION,2012,(2),4,858-874.
TomLindström,ScottA.Sisson,NinaHakansson,Karl-OlofBergman,UnoWennergren,AspectralandBayesianapproachforanalysisoffluctuationsandsynchronyinecologicaldatasets,MethodsinEcologyandEvolution,2012,(3),6,1019-1027.
tHeoretIcal pHysIcs AgnėŽukauskaitė,,ChristopherTholander,JustinasPališaitis,PerO.Å.Persson,VanyaDarakchieva,NebihaBenSedrine,FerencTasnádi,BjörnAlling,JensBirch,LarsHultman,YxAl1-xNThinFilms,JournalofPhysicsD,2012,(45),42,422001.
BoE.Sernelius,GrapheneasaStrictly2DSheetorasaFilmofSmallbutFiniteThickness,Graphene,2012,(1),2,21-25.
ARKarimov,MYYu,LennartStenflo,Largequasineutralelectronvelocityoscillationsinradialexpansionofanionizingplasma,PhysicsofPlasmas,2012,(19),9,092118.
Karl-FredrikBerggren,Slowphysics,Fysikaktuellt,2012,(),3,3-3.
AnnaEklöf,LindaKaneryd,PeterMünger,Climatechangeinmetacommunities:dispersalgivesdouble-sidedeffectsonpersistence,PhilosphicalTransactionsoftheRoyalSocietyB,2012,(367),1605,2945-2954.
PKShukla,BEliasson,LennartStenflo,Nonlinearpropagationofcoherentelectromagneticwavesinadensemagnetizedplasma,PhysicsofPlasmas,2012,(19),7,072302.
Conference:IrynaYakymenko,Karl-FredrikBerggren,Spinmagnetizationandelectronlocalizationinsemiconductorquantumwiresandquantumpointcontacts,2012.
BoSernelius,CassimirEffectsinGrapheneSystems:UnexpectedPowerLaws,InternationalJournalofModernPhysics:ConferenceSeries,2012,(14),1,531-540.
OMKrasilnikov,YuKhVekilov,IYuMosyagin,EyvasIsaev,NGBondarenko,Elasticphasetransitionsinmetalsathighpressures,JournalofPhysics,2012,(24),19,195402.
AVPonomareva,EyvasIsaev,YuKhVekilov,IgorAbrikosov,SitepreferenceandeffectofalloyingonelasticpropertiesofternaryB2NiAl-basedalloys,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),14,144117.
FerencTasnadi,MagnusOdén,IgorAbrikosov,AbinitioelastictensorofcubicTi0.5Al0.5Nalloys:Dependenceofelasticconstantsonsizeandshapeofthesupercellmodelandtheirconvergence,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),14,144112.
SABarannikova,AVPonomareva,LBZuev,YuKhVekilov,IgorAbrikosov,Significantcorrelationbetweenmacroscopicandmicroscopicparametersforthedescriptionoflocalizedplasticflowauto-wavesindeformingalloys,SolidStateCommunications,2012,(152),9,784-787.
MathiasBoström,BoSernelius,GustavoBaldissera,ClasPersson,BarryWNinham,Casimir-LifshitzinteractionbetweenZnOandSiO2nanorodsinbromobenzeneturnsrepulsiveatintermediateseparationsduetoretardationeffects,PhysicalReviewA.Atomic,Molecular,andOpticalPhysics,2012,(85),4,044702.
PeterSteneteg,BjörnAlling,IgorAbrikosov,EquationofstateofparamagneticCrNfromabinitiomoleculardynamics,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),14,144404.
OlleHellman,NVSkorodumova,SergeySimak,ChargeRedistributionMechanismsofCeriaReduction,PhysicalReviewLetters,2012,(108),13,135504.
GBrodin,LennartStenflo,Three-wavecouplingcoefficientsforamagnetizedplasma,PhysicaScripta,2012,(85),3,035504.
TobiasMarten,BjörnAlling,EyvasIsaev,HansLind,FerencTasnadi,LarsHultman,IgorAbrikosov,First-principlesstudyoftheSiNx/TiN(001)interface,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),10,104106.
ILoa,EyvasIsaev,MIMcMahon,DYKim,BJohansson,ABosak,MKrisch,LatticeDynamicsandSuperconductivityinCeriumatHighPressure,PhysicalReviewLetters,2012,(108),4,045502.
OGOnishchenko,OAPokhotelov,LennartStenflo,PKShukla,Stabilizationofmagneticcurvature-drivenRayleigh-Taylorinstabilities,JournalofPlasmaPhysics,2012,(78),93-97.
Conference:IrynaI.Yakymenko,Karl-FredrikBerggren,Boundstatesandelectronlocalizationinlow-dimensionalsemiconductorquantumpointcontacts,2012.
MathiasBoström,SimenA.Ellingsen,IverBrevik,DrewF.Parsons,BoSernelius,SignoftheCasimir-Polderinteractionbetweenatomsandoil-waterinterfaces:Subtledependenceondielectricproperties,PhysicalReviewA.Atomic,Molecular,andOpticalPhysics,2012,(85),6,064501.
PeterJason,MagnusJohansson,KatarinaKirr,QuantumsignaturesofanoscillatoryinstabilityintheBose-Hubbardtrimer,PhysicalReviewE.Statistical,Nonlinear,andSoftMatterPhysics,2012,(86),1,016214.
MathiasBostrom,IverBrevik,BoSernelius,MaofengDou,ClasPersson,BarryW.Ninham,Enlargedmoleculesfromexcitedatomsinnanochannels,PhysicalReviewA.Atomic,Molecular,andOpticalPhysics,2012,(86),1,014701.
MathiasBostrom,BarryW.Ninham,IverBrevik,ClasPersson,DrewF.Parsons,BoSernelius,Ultrathinmetalliccoatingscaninducequantumlevitationbetweennanosurfaces,AppliedPhysicsLetters,2012,(100),25,253104.
PKShukla,BEliasson,LennartStenflo,Stimulatedscatteringofelectromagneticwavescarryingorbitalangularmomentuminquantumplasmas,PhysicalReviewE.Statistical,Nonlinear,andSoftMatterPhysics,2012,(86),1,016403.
Chapter:Karl-FredrikBerggren,Fysik,Naturvetarguiden,2012,.
Other:Karl-FredrikBerggren,Fortsattförtroende-Fysikaktuelltnr1,2012.
Other:Karl-FredrikBerggren,Parallellavärldar-Fysikaktuelltnr2,2012.
Ph.D.:PeterSteneteg,Developmentofmoleculardynamicsmethodologyforsimulationsofhardmaterials,2012.
BjörnAlling,PeterSteneget,ChristopherTholander,FerencTasnádi,IvanPetrov,JosephEGreene,LarsHultman,ConfigurationaldisordereffectsonadatommobilitiesonTi1-xAlxN(001)surfacesfromfirstprinciples,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),24,245422.Ph.D.:MarcusEkholm,TheoreticalDescriptionsofComplexMagnetisminTransitionMetalsandTheirAlloys,2012.
Ph.D.:OlleHellman,Thermalpropertiesofmaterialsfromfirstprinciples,2012.
BoESernelius,Retardedinteractionsingraphenesystems,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(85),19,195427.
IFM actIvIty report 2012 109
JanBeyer,YuttapoomPuttisong,IrinaBuyanova,S.Suraprapapich,C.W.Tu,WeiminChen,TemperaturedependenceofdynamicnuclearpolarizationanditseffectonelectronspinrelaxationanddephasinginInAs/GaAsquantumdots,AppliedPhysicsLetters,2012,(100),14,143105.
Other:JanBeyer,IrinaBuyanova,BoE.Sernelius,SSuraprapapich,C.W.Tu,WeiminChen,StrongsuppressionofspingenerationataFanoresonanceinasemiconductornanostructure,2012.
PavelAKorzhavyi,InnaLSoroka,EyvasIsaev,ChristinaLilja,BorjeJohansson,Exploringmonovalentcoppercompoundswithoxygenandhydrogen,ProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica,2012,(109),3,686-689.
MathiasBoström,BoSernelius,RepulsivevanderWaalsforcesduetohydrogenexposureonbilayergraphene,PhysicalReviewA.Atomic,Molecular,andOpticalPhysics,2012,(85),1,012508.
MathiasBoström,BoSernelius,IverBrevik,BarryWNinham,RetardationturnsthevanderWaalsattractionintoaCasimirrepulsionascloseas3nm,PhysicalReviewA.Atomic,Molecular,andOpticalPhysics,2012,(85),1,010701.
PeterJason,MagnusJohansson,ExactlocalizedeigenstatesforanextendedBose-Hubbardmodelwithpair-correlatedhopping,PhysicalReviewA.Atomic,Molecular,andOpticalPhysics,2012,(85),1,016603(R).
MengyaoXie,FerencTasnadi,IgorAbrikosov,LarsHultman,VanyaDarakchieva,Elasticconstants,composition,andpiezolectricpolarizationinInxAl1-xN:FromabinitiocalculationstoexperimentalimplicationsfortheapplicabilityofVegardsrule,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),15,155310.
Conference:PadmaKantShukla,BengtEliasson,LennartStenflo,Hydromagneticsolitaryandshockwavesinamagnetoplasma,2012.
Conference:GertBrodin,LennartStenflo,Three-wavecouplingcoefficientsforamagnetizedplasma,2012.Karl-FredrikBerggren,Åsikterominfrastruktursatsningarna,Fysikaktuellt,2012,(),3,5-5.
Karl-FredrikBerggren,Signerat:Nyakraftervidrodret,Fysikaktuellt,2012,(),4,3-3.
OlgaVekilova,SergeySimak,AVPonomareva,IgorAbrikosov,InfluenceofNionthelatticestabilityofFe-Nialloysatmultimegabarpressures,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),22,224107.
MathiasBoström,ClasPersson,BoE.Sernelius,CasimirForcebetweenAtomicallyThinGoldFilms,EuropeanPhysicalJournalB,2012,(),.
JaroslawE.Prilepsky,AlexeyV.Yulin,MagnusJohansson,StanislavA.Derevyanko,Discretesolitonsincoupledactivelasingcavities,OpticsLetters,2012,(37),22,4600-4602.
PKShukla,LennartStenflo,Acousticgravitytornadoesintheatmosphere,PhysicaScripta,2012,(86),6,.
MathiasBoström,SimenÅdnöjEllingsen,IverBrevik,M.F.Dou,ClasPersson,BoE.Sernelius,Casimirattractive–repulsivetransitioninMEMS,EuropeanPhysicalJournalB,2012,(85),11,377.
Chapter:Karl-FredrikBerggren,OlofHallonsten,Timelineofmajorevents,Inpursuitofapromise,2012,21-30.
Chapter:Karl-FredrikBerggren,AleksandarMatic,ScienceattheESS:abriefoutline,InPursuitofaPromise,2012,31-47.
LindaKaneryd,CharlotteBorrvall,SofiaBerg,AlvaCurtsdotter,AnnaEklöf,CelineHauzy,TomasJonsson,PeterMünger,MalinSetzer,TorbjörnSäterberg,BoEbenman,Species-richecosystemsarevulnerabletocascadingextinctionsinanincreasinglyvariableworld,ECOLOGYANDEVOLUTION,2012,(2),4,858-874.
IgorAbrikosov,MarcusEkholm,AlenaV.Ponomareva,SvetlanaA.Barannikova,ImportanceofThermallyInducedMagneticExcitationsinFirst-principlesSimulationsofElasticPropertiesofTransitionMetalAlloys,SolidStatePhenomena,2012,(190),291-294.
SitKerdsongpanya,BjörnAlling,PerEklund,EffectofpointdefectsontheelectronicdensityofstatesofScNstudiedbyfirst-principlescalculationsandimplicationsforthermoelectricproperties,PhysicalReviewB.CondensedMatterandMaterialsPhysics,2012,(86),19,.
Chapter:PadmaKantShukla,BengtEliasson,LennartStenflo,AlfvénicSolitaryandShockWavesinPlasmas,Multi-scaleDynamicalProcessesinSpaceandAstrophysicalPlasmas,2012,129-141.
Conference:PeterJason,QuantumCompactonsinanextendedBose-Hubbardmodel,2012.
Conference:MagnusJohansson,PeterJason,KatarinaKirr,QuantumsignaturesofanoscillatoryinstabilityintheBose-Hubbardtrimer,2012.
110 IFM actIvIty report 2012
Theses
doctoral theses
lÖgdberg, FrIda: Populationdynam-icsinvariableenvironments–impactsofnoisecolourandsynchronyDissertation No 1416 (13 January 2012)
wIrÉn, anders:Correlatedselectionresponsesinanimaldomestication:thebehaviouraleffectsofagrowthQTLinchickensDissertation No 1413 (20 January 2012)
andersson, vIKtor:Electrontomog-raphyandopticalmodellingfororganicsolarcellsDissertation No 1414 (3 February 2012)
JaKobsson, MattIas:MonteCarlostudiesofchargetransportbelowthemobilityedgeDissertation No 1425 (9 March 2012)
rogstrÖM, lIna: HightemperaturebehaviourofarcevaporatedZrAINandTiAINthinfilmsDissertation No 1428 (22 March 2012)
beyer, Jan:SpinpropertiesinInAs/GaAsquantumdotbasednanostructuresDissertation No 1426 (2 April 2012)
Kaneryd, lInda:Dynamicsofecologi-calcommunitiesinvariableenvironments–localandspatialprocessesDissertation No 1431 (4 April 2012)
HÅKansson, nIna:NetworkanalysisandoptimizationofanimaltransportsDissertation No 1434 (26 April 2012)
lennartsson, Jenny:Networksandepidemics–impactofnetworkstructureondiseasetransmissionDissertation No 1433 (27 April 2012)
sandgren, veronIca:DesignandSynthesisofInhibitorsTargetingBACE-1,anAsparticProteaseInvolvedinthePathogenesisofAlzheimer´sDiseaseDissertation No 1436 (27 April 2012)
vasIlIaUsKas, reMIgIJUs:SublimationGrowthandPerformanceofCubicSiliconCarbideDissertation No 1435 (3 May 2012)
Fyrner, tIMMy:SynthesisofOrthogo-nallyFunctionalizedOligosaccharidesforSelf-assembledMonolayersandasMulti-modalToolsinChemicalBiologyDissertation No 1442 (11 May 2012)
HUng-HsUn lee: StructuralStudiesofOligo(ethyleneglycol)–ContainingAs-sembliesonGoldDissertation No 1446 (31 May 2012)
setzer, MalIn:ThedeclineofgreatArc-ticcharrinLakeVättern–empiricalandtheoreticalanalysesofsuggestedcausesDissertation No 1447 (1 June 2012)
steneteg, peter:DevelopmentofmoleculardynamicsmethodologyforsimulationsofhardmaterialsDissertation No 1454 (8 June 2012)
eKHolM, MarcUs:Theoreticaldescrip-tionsofcomplexmagnetismintransitionmetalsandtheiralloysDissertation No 1452 (14 June 2012)
HellMan, oloF: ThermalpropertiesofmaterialsfromfirstprinciplesDissertation No 1453 (15 June 2012)
saMUelsson, MattIas:Fundamen-talaspectsofHiPIMSunderindustrialconditionsDissertation No 1461 (16August 2012)
wennerstrand, patrIcIa:BiophysicalCharacterizationofThiopurineS-MethyltransferaseDissertation No 1462 (7 September 2012)
lUndsKog, anders: ControlledgrowthofhexagonalGaNpyramidsandINGaNQDsDissertation No 1464 (20 September 2012)
seHatI, parIsa: Influenceofintermo-lecularorderattheinterfacesDissertation No 1468 (27 September 2012)
gabrIelsson, roger: ElectroactiveConjugatedPolyelectrolytesBasedonEDOTFromsynthesistoOrganicElectronicsDissertation No 1470 (28 September 2012)
lÄttMan, HÅKan: StudiesonspatialandtemporaldistributionsofepiphyticlichensDissertation No 1471 (22 October 2012)
JoHnson, lars:InsideTheMiscibilityGap–NanostructuringandPhaseTrans-formationsinHardNitrideCoatingsDissertation No 1472 (19 October 2012)
IQbal, zaFar: OpticalSensingWithanOrdinaryMobilePhoneDissertation No 1473 (26 September 2012)
KnUtsson, axel: ThermalstabilityandmechanicalpropertiesofTiA1N-basedmultilayerandmonolithiccoatings
Dissertation No 1474 (16 November 2012)
JUnaId, MUHaMMad:MagnetronSputterEpitaxyofGaN:EpilayersandNanorodsDissertation No 1482 (5 November 2012)
xIe, Mengyao: StructuralandelasticpropertiesofInNandInAINwithdiffer-entsurfaceorientationsanddopingDissertation No 1485 (12 December 2012)
palIsaItIs, JUstInas:ValenceElectronEnergyLossSpectroscopyofIII-NitrideSemiconductorsDissertation No 1488 (14 December 2012)
licentiate theses
bergstrÖM, gunnar: ExploringtheSPRmethodologyformonitoringofcriticalattributesintoxicitytestingandbiopro-ductionThesis No 1517 LiU-TEK-LIC-2012:2
KHroMov, sergey: TheeffectofMgdopingonopticalandstructuralproper-tiesofGaNThesis No 1520 LiU-TEK-LIC-2012:5
scHMIdt, sUsann: CarbonbasedthinfilmspreparedbyHiPIMSandDCMSThesis No 1521 LiU-TEK-LIC-2012:6
sJÖQvIst, Jonas: Luminecenceproper-tiesofflexibleconjugateddyesThesis No 1522 LiU-TEK-LIC-2012:7
zUKaUsKaIte, agne:MetastableYAINandScAINthinfilms:growthandcharac-terizationThesis No 1524 LiU-TEK-LIC-2012:9
gÖransson, anna-lena:TheAlzheimerABPeptide:IdentificationofPropertiesDistinctiveforToxicPrefibrillarSpeciesThesis No 1526 LiU-TEK-LIC-2012:11
pUttIsong, yUttapooM: Spin-dependentrecombinationinGa(In)NAsalloysThesis No 1533 LiU-TEK-LIC-2012:18
cHen, sHUla:ExcitoniceffectsinZnOThesis No 1534 LiU-TEK-LIC-2012:19
olsson, sIMon:ApproximantPhasesinQuasicrystallineAlCuFeThinFilmsThesis No 1536 LiU-TEK-LIC-2012-21
aIJaz, azIM:HiPIMS-basedNovelDepo-sitionProcessesforThinFilmsThesis No 1537 LiU-TEK-2012:22
MocKUte aUrelIJa:ThinFilmSyn-thesisandCharacterizationofNewMAXPhaseAlloysThesis No 1538 LiU-TEK-LIC-2012:23
IFM actIvIty report 2012 111
norrby, nIKlas:HighpressureandhightemperaturebehaviosofTiA1NThesis No 1540 LiU-TEK-LIC-2012:25
Fager, Hanna: GrowthandCharac-terizationofAmorphousTiA1SiNandHfA1SiNThinFilmsThesis No 1542 LiU-TEK-LIC-2012:27
Ullbrand, JennIFer: Phasefieldmod-elingofSpinodaldecompositioninTiA1NThesis No 1545 LiU-TEK-LIC-2012:30
ForsÉn, rIKard: Mechanicalproper-tiesandthermalstabilityofreactivearcevaporatedTi-Cr-A1-NcoatingsThesis No 1546 LiU-TEK-LIC-2012:31
sÖnderby, steFFen:PhysicalvapordepositionofYttria-stabilizedZirconiaandGadolinia-dopedceriathinfilmsforfuelcellapplicationsThesis No 1552 LiU-TEK-LIC-2012:37
darMastUtI, zHaFIra: SiCFETgassensors:theory,development,andapplica-tionstofluegascleaningprocessesinpowerplantsThesis No 1554 LiU-TEK-LIC-2012:39
Kerdsongpanya, sIt: ScandiumNi-trideThinFilmsforThermoelectricsThesis No 1559 LiU-TEK-LIC-2012:44
tengstrand, oloF: Me-Si-C(Me=Nb,TiorZr)NanocompositeandAmorphousThinFilmsThesis No 1561 LiU-TEK-LIC-2012:46
Under- graduate Theses
Mathematicaland natural sciences programme
Ex-2570 KleMedsson, sHIcarra: FlocculationofnaturalorganicmatterinSwedishlakes
Ex-2571 enQvIst, erIK:Synthesisandcharacterisationofnon-evaporablegetterfilmsbasedonTi,ZrandV
Ex-2572daHl, MadeleIne: Microorgan-ismsinDieselFuel–Whataretheyandhowdowecombatthem?
Ex-2573 carlsson, peter: Combinato-rialthinfilmsynthesisofCr2AlC;acom-parisonoftwosputteringmethods
Ex-2574 saMUelsson, caMIlla:TheinfluenceofdifferentstressfactorsonthelagphaseandgeneticexpressionofListerinamonocytogenesincoldsmokedsalmon
Ex-2575 pIlstÅl, robert K:Probingpro-teinshapeandinteractionsusingSmallAngleX-rayScattering
Ex-2576 HÅdÉn, Jonas:TheoreticalstudyoforientationsofbiofunctionalizedthiolatesonAu(III)surface
Ex-2577HÖcKerdal, HenrIK:Electro-chemicalmeasurementsofsalivaryalpha-amylaseactivity
Ex-2578 svensson, davId:Synthesisandcharacterisationofpolyelectrolytesbasedonpolymersofdiallyldimethylammoniumchlorideandpoly(styrene-co—butadiene)
Ex-2579arJa, KatrIann:Synthesisofporphyrin-oligothiopheneconjugatesaspotentialphotodynamictherapyagents
Ex-2580 Matrood, IKHlas: Prepara-tionsoffluorinederivativesfrombis(2,4-dimethoxyphenyl)-4-nitrophenylmethanolandbis(2,4-dimethoxyphenyl)-4-fluoro-phenylmethanolexploringthreealter-nativemethodsfordemethylationandcyclization
Ex-2581 MÅnsson, sanna: SynthesisandCharacterizationofTryptamineandCathinoneBasedDesignerDrugs
Ex-2582 strId, elIn:TheinfluenceofHostGeneticsonJVCandEBVAntibodyLevelseinMultipleSclerosisPatientsandControls
Ex-2583 gUstaFson, robert: Bio-physicalcharacterizationofthe*5proteinvariantofhumanthiopurinemethyltrans-ferasebyNMRspectroscopy
Ex-2584 carlsson, cecIlIa: StudiesofunspecificinteractionbetweentheAβan-tibody6E10andbloodcoagulationproteinfactorX
Ex-2585 Karlsson, sandra:Försegling-segenskaperhospappersförpackningarmedkonventionellplasatochbioplast
Ex-2586 oloFsson, lInda:SurfaceplasmonresonancebasedquantificationofTau,amarkerofneurodegenaration
Ex-2587 MÅrtensson, toMas:Applica-tionofenzymesforpre-treatmentofwoodchipsforenergyefficientthermomechani-calpulping
Ex-2588 wallenHaMMar, aMÉlIe:TheRo52/TRIM21E3ubiquitinligaseandtheroleofintsconservedB-boxinubiquitina-tion
Ex-2589 zIMdaHl, anna:Doantibiot-icsaffecttheTPMTenzymeactivityinleukemiccells?
Ex-2590eKHolM, osKar: ReducingIn-hibitoryEffectsinSurfaceWaterSamplesbyComparingDNAExtractionKits
Ex-2591 Kronander, bJÖrn: Quantifi-cationofalpha-synucleinincerebrospinalfluid
Ex-2592 tUneK, HennIng: DevelopmentofAlurepeatassayasatoolfornormaliza-tionofgeneexpressionusingRT-qPCR
Ex-2593 vÅHlIn, lIsa: Newmethodforexploringproteinstability-effectsofran-dommutations
Ex-2595 elIasson, MIKaela: Sekretessbelagtt.o.m.2017-09-27
Ex-2596andersson, per ocH en-Myren, carolIne:Metodutvecklingförspåranlysavlaktospåförhistoriskkeramik
Ex-2597byHeden, caMIlla:Metodu-tvecklingochvalideringföranalysavsvavelochklormeED-XRF
Ex-2598dovberg, MarcUs: Utvecklingavanalysmetodförkadmiumochjärnifastfasmedröntgenfluorescensspektro-metri
Ex-2599 erIKsson wenstrÖM, Jacob ocH lIndgren, MattIas: Testavexperimentellbestämningavdekloreringisvenskskogsjord
Ex-2600HedlUnd, JoseFIn: Utvärder-ingavdirektfällningmedpolymerdoser-ingsomdelreningsstrategividSlotts-hagensreningsverk
Ex-2601 Jensen, ann-soFIe:Metod-utvecklingföranalysavDeoxynivalenolispannmålmedELISA
Ex-2602 JoHansson, alexandra:MetodutvecklingföranalysavmetalleripannvattenmedICP-OES
Ex-2603JoHansson, eMIl ocH wallgren, JaKob: Implementeringavanalysmetoderförkvalitativanalysavkolhydrater
Ex-2604 JoHansson, eMMa : Framtag-ningavanalysmetodikföruppslutningavkemiskaprodukter
112 IFM actIvIty report 2012
pU
Bli
ca
tiO
ns
& t
he
se
s
Ex-2605 JoHsson, JoHanna: Studyofthermalproteinstabilitywiththehelpoffluorescenceandlightscatteringtech-niques
Ex-2606 KoMorowsKa, Marta: Luft-provtagningsamtanalysavmono-ochdiisacyanater
Ex-2608 adolFsson, dan ocH sMaJIlovIc, sanela:Utvecklingochoptimeringavprotokollföruttryckochreningavcalmodulin-Tr2CE140Q
Ex-2609 bergKvIst, lIza: Characteriza-tionofAβusingsizeexclusionchroma-tographyandwesternblot
Ex-2610 JoHansson, MarIa:Cholecys-tokinin-likeconcentrationintheratbrain:Acomparisonoftwodifferentradioim-munoassays
Ex-2611 lepenIca, aIda:Aminoacidselectiveunlabelingoftheproteinthio-purinemethyltransferaseforresonanceassignmentsofNMRspectra
Ex-2612 MolIn, ottIlIa: Ureastabil-itystudyofamonomericvariantoftransthyretinatdifferenttemperaturesusingintrinsictryptophanfluorescencespectroscopy
Ex-2613Fransson, MarcUs: Stabilitystudyoftransthyretinatdifferenttem-peraturesusingureadenaturationandtryptophanfluorescencespectroscopy
Ex-2614 pettersson, ÄMMa ocH rapp, eMMa:Synthesisof1-DL-1-O-α-D-Galactopyranosyl-myo-Inositiland1.DL-1-O-α-D-Glucopyranosyl-myo-Inositol
Ex-2615 JoHansson, MalIn: Investiga-tionofhPin1mediatedphosphyrolationdependencyindegradiationcontrolofc-Myconcoprotein
Ex-2616 sIgvardsson, Jonas: Synthe-sisandstudyofmesoporous,highsurfacearea,zirconiaandyttria-stabilizedzirconia
Ex-2617 zetterstrÖM, sUsanna: Iso-lationandsynthesisofcurcumin
Ex-2618Kalered, eMIl: Quantumchemicalstudiesofthechloride-basedCVDprocessforSiliconCarbide
Ex-2619lIn, cHIng-cHI: QuantumchemicalstudiesonTitaniumCarbideformationinaChemicalVaporDeposi-tionprocess
Ex-2620aKoto, brenda:Isspringburningaviablemanagementtoolforspecies-richgrasslands?
Ex-2621 baHraMpoUr, sHaHrzad: Identifyingnovelregulatorygenesaffect-ingcellspecificationandproliferationintheApterousclusteroftheDrosophilamelanogasterembryoniccentralnervoussystem
Ex-2623dUtta, ravI KUMar:MutationandcopynumbervariationanalysisofNotch1andNotch2geneinChronicLym-phocyticLeukemia
Ex-2624MoHaMMed, ebraHIzIM zIaUddIn Javed:Broodpatchmor-phologyandhormonalcorrelatesduringnaturalincubationinRedJunglefowlGallusgallus
Ex-2625 FallaHsHaHroUdI, aMIr: DomesticationrelatedgenotypeonADRA2C-adeterminantoffearresponseinchickens?
Ex-2626HUQ, Md. nazMUl:Thege-neticbasisofadomesticationtraitinthechicken:mappingquantitativetraitlociforplumagecolour
Ex-2627KIM, sUngHee: Olfactorydis-criminationabilityofSouthAfricanfurseals(Arctocephaluspusillus)
Ex-2629 MatHew, bInU:Tregulatorycells(Tregs)frominterferongamma(IFN-y)deficientmicecontributetoareductionintheformationofauto-antibodiesinmiceexposedtomercurychloride
Ex-2630 MUsa, naJIHaH:Usingsexpheromoneandamulti-scaleapproachtopredictthedistributionofararesaprox-ylicbeetle
Ex-2631 nygÅrds, soFIa: Importanceofhabitatqualityandlandscapefactorsforamonophagousshieldbugonararehostplant
Ex-2632 odHaMMar, anna M e:Olfac-torysensitivityofspidermonkeys(Atelesgeoffroyi)forpredatorodours
Ex-2633palIvela, santosH KUMar: ImmunogenicityofEndocineTMadju-vantedInfluenzaAsplitvirusvaccineadministeredviaintranasalandsublin-gualroutes
Ex-2634persson, MIa: Effectsofstressandbalanceofoptionsondecision-mak-ingandassociatedphysiologicalrespons-esinlayinghens
Ex-2635 racHaMadUgU, sHIva KrIsHna: Characterizationofspecificvolatilesofpigbloodwiththepotentialaspredatorchemoattractantsandaspreywarningsignals
Ex-2636 raMan, aMItHa:Heterologousexpressionofnon-specificlipidtransferproteins(nsLPTs)fromPhyscomitrellapatensinyeastPichiapastoris
Ex-2637 raMesH, gIrIsH:Effectsofchronichypoxiaoncardiacwallthicknessandcardiomyocytesizeinfetalbroilerchickens
Ex-2638ravIcHandran, pravIn:IsthevasodilatoryeffectofnitricoxideonthebroodpatchmicrocirculationenhancedduringbroodinessinRedJunglefowl(Gal-lusgallus)andZebraFinch(Taeniopygiaguttata)?
Ex-2639 rIzvanovIc, alIsa: Olfactorydiscriminationperformanceandlong-termodermemoryinAsianelephants(Elephasmaximus)
Ex-2640 sUbedI, yUba raJ: Theresponseofecosystemstoanincreasinglyvariableclimate
Ex-2641 sveMer, FrIda: AmutationintheTSHRgene-howdoesitaffectsocialandfearrelatedbehavioursinchickens?
Ex-2642tHernstrÖM, taIna:Maxi-mumpricepaidincaptiveBushdogs(Speothosvenaticus)
Ex-2643 UrIo, Florence: EBVimmor-talizationandcharacterizationofmalariaspecificBcellsfromimmunedonors
Ex-2646eKstrÖM, andreas:Metabolicimplicationsofhavingasmallheart:In-dicationsofhypometabolismandgeneticalterationsinglycolyticmetabolismintheOrnateTinamou,Nothoproctaornata
Ex-2647 gasparInI, Isabella: Cardi-orespiratoryresponsesuponincreasedmetabolismintheOrnateTinamou,Nothoproctaornata
Ex-2648MaHadevan, lavanya:En-chancedimmunogenicityconferredbyTNFRsuperfamilymembersligationinvivo
Ex-2649 sarraFcHI, aMIr: Equinestereotypicbehaviorasrelatedtohorsewelfare:Areview
Ex-2652 bergner, adaM:Studieravhabitatvalochrevirstrukturerhosvassån-gare(Locustellaluscinioides)iTåkern
Ex-2653 bergvall, carolIne: Thedomesticationeffectsonsocialsupportinchickens(Gallusgallus)
Ex-2655blIxt, torbJÖrn: Thebe-haviouralresponseofmicetopredatorodours
Ex-2656 persdotter elIasson, Moa:UseofspaceincaptiveSiberiantigers
Ex-2657FogelHolM, Jesper: Geneticanalysisofpotatoonion(Alliumcepavarsolanium)
IFM actIvIty report 2012 113
pU
Bli
ca
tiO
ns
& t
he
se
s
Ex-2658HalldÉn, lIse-lotte:Fjäderfä-näringenIÖstergötland–enöverblick
Ex-2659HIdIng, caMIlla:Deversityofbirdsinrelationtoarea,vegetationstruc-tureandconnectivityinurbangreenareasinLaPaz,Bolivia
Ex-2662JÖnsson, JoHan: Theeffectofropeandanactivationballontheperfor-manceofharmfulsocialbehaviorsinpigs
Ex-2663 KataJaMaa, rebecca:Effectsofdomesticationonsocialsupportinchick-ens(Gallusgallus)
Ex-2664 lIndbloM, eMelIe:Traitsandbehaviouraffectingsocialstatusinredjunglefowl(Gallusgallus)hens
Ex-2665lUndberg, MalIn:Habitatpref-erenserhostjockskaligmalarmussla(Uniocrassus)medavseendepavattend-jupochbeskuggning
Ex-2666MolIn, JoHan:PredationpåevertebraterundertidigvårisjönTåkern
Ex-2668nIlsson, eMMa: Theeffectsofanactivityballandropesonpigs’behav-iours
Ex-2669 nIlsson, sara:UseofspaceincaptiveSiberiantigers
Ex-2670nIlsson, soFIa:Effectsofstressonfowlandtheirneedforsocialsupport
Ex-2671KUo, cHIeH-yI: FabricationandOpticalPropertiesofZnONanocrystal/GaNQuantumWellBasedHybridStruc-tures
Ex-2672EKtarawong, annop:Growthandcharacterizationofgrapheneon4H-SiC(0001)
Ex-2673 pettersson, elIn:Vilkenpref-erenshartjockskaligmålarmussla(Uniocrassus)förbottensubstratochvatten-hastighetiStorån,Östergötland?
Ex-2675sonelIn, saraH:EffekteravluftföroreningarpålavarochgrönalgerpålindiNorrköpingskommun
Ex-2677vennerHolM, lInn: Ontog-enyofpersonalityinredjunglefowlchicks
Ex-2678weddFelt, erIKa: Recyclingpotentialofphosphorusinfood–asubstanceflowanalysisofmunicipali-ties
Ex-2679le MoIne, rebecKa: Thelandusecoverchangesfrom1992to2011inKarbiAnglong,Assam,India
Ex-2680 sarraFcHI, aMIr: Olfactorysensitivityofhumansubjectsforsixpredatorodorants
Ex-2681scHarIs, Inger:Cross-fosteringinGreywolves(CanisLupus)Ex-2682lUndberg, gUstaF: CoreLevelBindingEnergyShiftsinarandomAgPdalloyusingtheExactMuffin-TinOrbitalmethod
Ex-2683norell, Jesper: elasticconstantsandsoundvelocitiesofFe0.87Mn0.13randomalloyfromfirstprinciples
Ex-2684 vastesson, alexander: Micro-StructuringofNewMaterialsCombinedwithElectronicPolymersforInterfaceswithCells
Ex-2685edberg, Jesper: Sekretessbel-agdt.o.m.2017-06-14
Ex-2686 sandÉn, caMIlla: Nanostruc-turesonaVector–EnzymaticOligoProductionforDNANanotechnology
Ex-2687del rÍo, lÍa Fernández:AnInvestigationofthePolarizingProper-tiesandStructuralCharacteristicsintheCuticlesoftheScarabBeetlesChrysinagloriosaandCetoniaaurata
Ex-2688 Hedborg, JUlIa: APrintedBiosensorBasedonanOrganicElectro-chemicalTransistorwithMediatedGateElectrode
Ex-2689 HUang, Ho-HsUan:CubicSili-conCarbideSublimationGrowthusing1.2degoff-axissubstrates
Ex-2690tsUng, cHang cHe: Investiga-tiononachangeinresponsedirectionofGadopedZnOnanoparticlesresistivesensorsonexposuretoNO
Ex-2692blanK, JennIe:Tillverkn-ingsstrategiförmedicintekniskaproduk-ter
Ex-2694arUMsKog, pÄr:Acombinato-rialchemistryapproachtotheamorphousAl-In-Xn-Otransparentoxidesemicon-ductorsystem
Ex-2695 erIKsson, nIcKlas:Metodu-tvecklingförkvantitativanalysavnickelochkoboltifastmatrismedXRF
Ex-2696 Fors, JonatHan: ModelingandOpenFOAMsimulationofstreamersintransformeroil
Ex-2697 broMan, eva: PrintableBiosen-sorsbasedonOrganicElectrochemi-calTransistorswithaPlatinizedGateElectrode
Ex-2698 lIndMaa, Alexander:SupercellTreatmentsofDirsorderedMagnetisminChromiumNitride
Ex-2699taponen, robIn:Massspec-trometrymethodologyforevaluationofcomponentsineffluentsfromabioreac-torculture
Ex-2700 bIlal, syed MUHaMMad:ThermalStabilityofArcEvoporatedZrCrAIN
Ex-2702 laxvIK, carolIne: Adenovi-rusharvestprocess:UseofhollowfibermicrofiltrationforPER.C6@CLARIFICA-TION
Ex-2703nworaH, nnaMdI FelIx:FabricationandcharacterizationofindividuallyadressablePolypyroleTrilayerMicroactuators
Ex-2704 raza, MoHsIn: Synthesisofhydrogenatedamorphouscarbon(a-C:H)thinfilmsbyHiPIMS-basedprocesses
Ex-2705 antony, aswatHI anto:SmartLabel-FreeTroponinBasedIm-munosensorfortheEarlyDiagnosticsofMyocardialInfarction
Ex-2706 paUlsson, dan:Acolarimetry-basedcontrolofspecificgrowthrateinanEscherichiaColifed-batchcultureusingasequentialfiltrationapproachforincreasedrobustness
Ex-2709 Jonsson, JoseFIne:EffectofvoluntaryexerciseonBDNF/TrkBgeneexpressionandalcoholintake
Ex-2710JoensUU, Jenny: PraktikutfördpåBillerudSkärblackaAB(Praktikrap-port)
about this publication
Editor: Lejla Kronbäck, IFM, Linköping University.
Print: LiU-Tryck
Production: Markus Reklambyrå AB IFM Activity Reports are also availableat www.ifm.liu.se/ar/
Read more at
www.ifm.liu.se
AC
TIVITY R
EPOR
T • DEPARTM
ENT O
F PHYSIC
S, CH
EMISTRY AN
D BIO
LOG
Y • JANU
ARY - DEC
EMBER 2012