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PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

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Page 1: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

PTAGIS System Review and Roadmapfor the

2013 PIT Tag Steering Committee Annual Meeting

Page 2: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Summary of PTAGIS Data Processing for 2012

2.8 million

PIT-taggedfish

released

27 organizations

336release

locations

Page 3: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Summary of PTAGIS Data Processing for 2012

14+ million

observations

1.06 millionunique

tags

177interrogation

sites

Page 4: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2012 Field Data Systems Update

• P3: current version 1.5.1• Removed Tag Manufacturer's Code Validation per PTSC request• Support for Biomark HPR+ Portable Transceiver

• MiniMon: current version 1.7.0• Removed Tag Manufacturer's Code Validation per PTSC request• Support for Biomark FS-2020 Adult Transceiver

• M4: current version 1.5.1• SbyC features implemented and lab tested• Live fish test at GOJ confirmed lab testing• Site evaluation at GOJ, B2J, and BCC in June• High-availability features implemented and tested• Deployed to all PTAGIS-maintained sites for 2013 season

Page 5: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

M4 Deployment for 2013 Evaluation (no SbyC)

Page 6: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

M4 Deployment for SbyC 2013 Evaluation

Page 7: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

New PTAGIS Website (Beta)

• May 2012: Internal Release to Focus Group• October 2012: Public Release• January 2013: Update

Page 8: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website: Content Management System as Foundation

• Manages online content such as documents, photos and videos• Manages users accounts and roles (tag coordinator, data steward, etc.)• Searching: tagged-based and full-text • Web page templates (support for mobile devices)• Newsletter creation, subscription and distribution• Email campaigns

Page 9: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: Community Forums

Page 10: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: Interrogation Site Maps

Page 11: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Web Site Features: News and Announcements

Page 12: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Web Site Features: PTSC Contacts and Charter

Page 13: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: Document Library

Page 14: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Web Site Features: Updated Online Tour

Page 15: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: Services

Page 16: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: Request New Validation Code

Page 17: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: SbyC Project Request Service

Page 18: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: Data Dictionary

Page 19: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: Quick Reports

Page 20: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: Advanced Reports

Page 21: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Advanced Report Features: Standard Report Types

Page 22: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Advanced Report Features: QueryBuilder 2

Page 23: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Advanced Report: Tutorials, Documentation and Webinars

Page 24: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

PTAGIS4 Data File Extracts

• File-based replica of the entire PTAGIS dataset• Replacement for TMT and Telnet features from PTAGIS3• Primarily for large data consumers such as FPC and DART• Files are downloaded and merged into another database• Updated nightly• Partitioned by periods of time, such as changes occurring• Yesterday• Last week• Last month• Last year

Page 25: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Website Features: Analytics (Oct. 24th 2012 to Today)

Page 26: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Summary of QueryBuilder2 Web Report Usage (October 24th 2012 to Today)

144usersran

at least onereport

225millionrows

returned

8,879

jobsrun

Page 27: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Summary of QueryBuilder1 Web Report Usage (October 24th 2012 to Today)

228usersran

at least onequery

3,167

queriesrun

674millionrows

returned

Page 28: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2013 Roadmap Introduction

PTAGIS3 Server and related components disabled by Oct. 2013• Ingres Database (license agreement requires uninstall)• Legacy Website and QueryBuilder• IDL and FDVL field data processing • O&M reports and tools (PTOC central)• Telnet and TMT files• Tag Distribution System

Requires complete transition to PTAGIS4 server

Page 29: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2013 Roadmap: Interrogation Data Processing and O&M Reporting

Before 2013 Field Season (March 1): • All interrogation data to be processed in PTAGIS4 server• Disable any PTAGIS3 interrogation data source in PTAGIS4 reporting• PTAGIS3 interrogation data and reports will be used for reference only

• Requires the following tasks to be completed:• Transform and load MiniMon data into PTAGIS4 for sites not running M4• Complete transceiver diagnostic data extraction for O&M reporting• Disable interrogation data sync from PTAGIS3• Consolidate PTAGIS4 data model• Complete remaining O&M reports and tools:

• Diversion Gate Efficiency (DGE) for SbyC operations• TASS enunciator tool

Page 30: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

PTAGIS4 Field Interrogation Data Processing for 2013 Evaluation

PTAGIS Maintained Sites

M4(PRIMARY)

PTAGIS4Server

PTAGIS3Server

MultiMon(Backup)

MiniMon(Backup)

PTAGIS4 Advanced Reports PTAGIS3 QueryBuilder

Page 31: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

PTAGIS4 Field Interrogation Data Processing for 2013 Evaluation

PTAGIS Maintained Sites

M4(PRIMARY)

PTAGIS4Server

PTAGIS3Server

MultiMon(Backup)

MiniMon(Backup)

Other Interrogation Sites

MiniMon PIFF(data logger)

PTAGIS4 Advanced Reports PTAGIS3 QueryBuilder

Page 32: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

PTAGIS4 Field Interrogation Data Processing for 2013 Evaluation

PTAGIS Maintained Sites

M4(PRIMARY)

PTAGIS4Server

PTAGIS3Server

MultiMon(Backup)

MiniMon(Backup)

Other Interrogation Sites

MiniMon PIFF(data logger)

PTAGIS4 Advanced Reports PTAGIS3 QueryBuilder

Patch Manager

Page 33: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Patch Manager Utility

• Patch gaps in data between systems• Source can be M4 or MiniMon• Update PTAGIS3 or PTAGIS4 systems

Page 34: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Observation Detail Comparison Between Systems

Page 35: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

Tag Code Validation on PTAGIS4 Server

Each tag code processed as an observation is validated against a list of known tag masks, for example:

3D9.1BF1, 3D9.1C2C, …If tag code doesn’t match:

1. Observation event marked ‘INVALID’ 2. Observation is Processed into reporting datamart3. Steward is notified

Causes of an ‘INVALID’ tag may be: • Spurious Read • Unapproved Vendor

‘INVALID’ tag events do not appear in reports by default

Need to create approval process for new vendors and tag types

Tag Validation for Mark, Recapture, Mort Data to be added later

Page 36: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2013 Roadmap: New System Evaluation

Evaluation tasks during the 2013 out-migration season:

• Monitor M4 systems – update as needed

• Continue manual and automated data audits to evaluate PTAGIS4 transition

• Monitor field data processing in PTAGIS4 – update as needed

• Maintain both platforms for SbyC operations (M4 and MultiMon)

• Evaluate new O&M reports and tools – update as needed

Page 37: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2013 Roadmap: Promote PTAGIS4 Website into ProductionPromote Beta Website as Production End of March 2013

• Notify users of this change via email in February

• May be able to demote current site as legacy

• www.ptoccentral.org to remain operational for O&M report evaluation

• ftp.ptagis.org will transition later (TBD)• To avoid changing field data collection systems• New FTP server is ptagisftp.ptagis.org

Page 38: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2013 Roadmap: Mark Data Processed via Sync into PTAGIS4

PTAGIS4Server

PTAGIS3Server

P3

PTAGIS4 Advanced Reports PTAGIS3 QueryBuilder

Sync

Page 39: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2013 Roadmap: Process Mark Data Directly into PTAGIS4

PTAGIS4Server

PTAGIS3Server

P3

PTAGIS4 Advanced Reports PTAGIS3 QueryBuilder

Sync

• Scheduled in Summer 2013• Use New Tag Coordinator Features in PTAGIS4• Complete decoupling from PTAGIS3• Extend Tag Code Validation

Page 40: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2013 Roadmap: Potential DeliverablesThese features and tasks may be accomplished in 2013 as time and resource allow:

• Develop a replacement Tag Distribution System• Based upon Scoping Process

• Additional Web Content:• Existing Interrogation Site Metadata• Complete Image Library• Add Tagging/Interrogation Videos Resources

• Additional web-enabled workflow services:• New interrogation site requests• Additional metadata

Page 41: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2013 Roadmap: Potential Deliverables ContinuedThese features and tasks may be accomplished in 2013 as time and resource allow:

• Metadata Analysis and Refinement• Refine Data Dictionary• Revise Spec-Doc• Scope next tagging software P4• Enhance M4 interrogation data

• Interrogation Site Steward Web Portal• Stewards to manage interrogation data and metadata• Web-enabled PIFF for non-standard data submissions

• Consolidate raw data file repository

Page 42: PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

2013 Roadmap: Conditions for Delivery

• No Contingency Planning • Systems Failures• Budget Shortfalls

• Limit Ad-Hoc Requests • Includes Technical Coordination and Review

• Use Remaining Resources Wisely• Synergetics Subcontract for PTAGIS3 (Doug Clough) Limited to ~300 hours• Limited Subcontracts for PTAGIS4 Development• Limited Travel and Training

• Retain Talent and Morale