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DataCite Services: Promoting Open Science Data データサイトサービス: オープンサイエンスデータの推進 By Kristian Garza Open Science Data Promotion Workshop, Kyoto 2018

Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

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Page 1: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

DataCite Services: Promoting Open Science Dataデータサイトサービス: オープンサイエンスデータの推進 By Kristian GarzaOpen Science Data Promotion Workshop, Kyoto 2018

Page 2: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Before... Now..

データを価値あるものにする

Page 3: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Agenda発表内容

1. DataCite Introduction データサイトの紹介

2. Services and a Framework for Crosslinking Data,

Authors and Publications データ・著者・論文の相互

リンクのためのサービス及びフレームワーク

3. Services to Globally Identify Data Authors

データ作成者をグローバルに特定するサービス

4. Guidelines for Research Data Metrics 研究データメ

トリックのためのガイドライン

Page 4: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit
Page 5: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit
Page 6: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit
Page 7: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

DataCite a quick snapshot

● Not-for-profit Global initiative since 2009

● > 60 Members worldwide (Large institutions)

● > 1300 Datacenters

● >13,000,000 DOIs registered

● > 6,000,000 resolutions per month

Page 8: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

DataCite’s growth

Proportional Area Chart for DOI registrations by 2012 superposed on total of number of DOI Registrations by 2018

Proportional Area Chart for datacenters with DataCite by 2012 superposed on total of number of datacenters with DataCite by 2018

Page 9: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Persistent Identifier Systems 永続的 ID システム

Persistent Uniform Resource Locator (PURL) 永続的 URL

Life Science Identifier (LSID)

ライフサイエンス ID

Digital Object Identifier (DOI)

デジタルオブジェクトID

Handles ハンドラ

Archival Resource Key (ARK) アーカイブ資源キー

Page 10: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit
Page 11: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit
Page 12: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit
Page 13: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit
Page 14: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

The benefits can be enjoyed worldwide

Page 15: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit
Page 16: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Agenda発表内容 1. DataCite Introduction

2. Services and a Framework for Crosslinking

Data, Authors and Publications データ・著者

・論文の相互リンクのためのサービス及びフ

レームワーク

3. Services to Globally Identify Data Authors

4. Guidelines for Research Data Metrics

Page 17: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

データ・著者・論文を相互にリンクするためのサービス及びフレームワークServices and a Framework for Crosslinking Data, Authors and Publications

Page 18: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

PIDs Cross-linking PIDの相互リンク

Cross-linking refers to the explicit relationship between two or more PIDs. We

worked on identifying the best practices to link different types of identifiers and

data types in the context the services that provide the PID, whether this be

connecting data to publications, to researchers, to organizations, to funders, or

some combination thereof.

https://project-thor.eu/the-thor-mission/

Page 19: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Benefits of Cross-linking Data and Publications

● Increased visibility, discovery and retrieval of both literature and data

● Facilitating reuse, reproducibility and transparency of research

● Enabling better attribution of credit for published data, providing an

additional incentive for researchers to share their data.

https://doi.org/10.1101/097196

Page 20: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Using Related-Identifier field in the Metadata メタデータの関係するIDフィールドを利用

「派生源」確認ハンドラ

「新しいバージョンのDOIか?」確認ハンドラ

「Crossref DOI で引用されているか?」確認ハンドラ

「arXiv により文書化されているか?」確認ハンドラ

「URLで補足されているか?」確認ハンドラ

https://schema.datacite.org

Page 21: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Discovery of Links between Data and Scholarly Articles

https://eventdata.datacite.org

Dataset Publication

Page 22: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Discovery of Links between Data and Scholarly Articles

https://eventdata.datacite.org

Page 23: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Improving support for Data Citation in Data Repositories

https://doi.org/10.1101/097196

Page 24: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Providing services for crosslinking and embedding metadata in landing pages

Page 25: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Using Content-Negotiation

$(document).ready(function() { var identifier = $("meta[name='DC.identifier']").attr("content"); if (identifier === undefined) { return; } var doi = new URL(identifier); var url = $('#site-title').attr('data-conneg'); url += '/application/vnd.schemaorg.ld+json/' + doi.pathname;

$.ajax({ url: url, dataType: 'text', // don't convert JSON to Javascript object success: function(data) { $('<script>') .attr('type', 'application/ld+json') .text(data) .appendTo('head'); }, error: function (error) { console.log(error.responseJSON); } });});

Page 26: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

DEMO デモhttps://doi.pangaea.de/10.1594/PANGAEA.760907

Page 27: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

How to embed metadata in web pages

DataCite exposes webpages with crawl-able structured data using schema.org markup.

Using the dataset class from schema.org

Mapping from DataCite Schema (v4.0, 2016) ( which has only 6 mandatory fields )

Page 28: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Facilitating schema conversion and formatting.

http://www.github.com/datacite/bolognese

Page 29: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Uptake

Repositories with metadata embedded in Schema.org. Some examples:

● Dryad● Dataverse● Zenodo● And others…● Full list:

https://github.com/datacite/freya/blob/master/schema_org.csv

28

Page 30: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Cross-linking and the Scholix WG

A framework for exchanging information about the links between scholarly literature and data.

http://www.scholix.org/

Page 31: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Scholix Information Model

SourceObject

TargetObject

Link

Relationship

….

Providers

● Information about the two objects● Information about the nature of the link and the link package itself http://www.scholix.org/

Page 32: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Scholix Link Schema

● This schema represents the broad community consensus after two in-person workshops and lots of discussion

● The schema has intentionally very few required elements● Focus is on the link, only required properties for source and target object

are PID and type (either literature or dataset)● Optional metadata for objects where those are not available via PID● Small controlled vocabulary for relation type: isReferencedBy,

isSupplementTo, isRelatedTo

http://www.scholix.org/

Page 33: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Scholix Link Package

http://www.scholix.org/

Page 34: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Scholix Schema 3.0

http://www.scholix.org/

Page 35: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

データ作成者をグローバルに特定するためのサービスServices to Globally Identify Data Authors

Page 36: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit
Page 37: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Claiming Dataset to your ORCID record from DataCite Search

www.search.datacite.org https://search.datacite.org

Page 38: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Support datasets claiming in multiple workflows.

https://project-thor.eu/

Page 39: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Support datasets claiming in multiple workflows.

https://project-thor.eu/

Page 40: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

研究データメトリックのためのガイドラインGuidelines for Research Data Metrics

Page 41: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

There has been previous efforts on counting citations

but ● Does not include usage● How can we do metrics? ?

Page 42: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Therefore…

The implementation of a code of practice for data level metricsデータレベルメトリックのための実践規約の実装

https://makedatacount.org

Page 43: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

43

Dev

elop

New

Dat

a Le

vel M

etric

s H

ub

10111001101001101001010011100110100110

Data Citations

Repository Usage Metrics

Future Metrics

Leverage Existing Initiatives

Develop New Recommendation

Ser

ver L

og

Pro

cess

ing

Drive Adoption - Engage Communities

Display Data Metrics

https://makedatacount.org

Page 44: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Protocol for exchanging Data Metrics

SUSHI (Standardized Usage Statistics

Harvesting Initiative) protocol

(http://www.niso.org/workrooms/sushi/ )

has greatly facilitated the handling of large

volumes of usage data, and its

implementation by vendors allows the

automated retrieval of the COUNTER usage

reports into local systems, making this

process much less time consuming for the

librarian or library consortium administrator.

http://www.niso.org/workrooms/sushi/

Page 45: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

MDC Milestones 一里塚

2017 2018

June 2017MDC Project Started

February 2018CoP Release

March 2018Hub prototype

May 2018MVP

https://github.com/datacite/sashimi

Page 46: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

Get Involved 参加方法

Repositories – contact us if you would like to be an early adopter

Publishers – support data citations & ensure your citation data and metadata are open

Institutions- contact us if you would like to support in your institutional repositories and help us spread the word

Researchers- we are looking for beta testers for our front end development of data level metrics

Funders- if you are interested in supporting this initiative, please get in touch.

Follow us on Twitter @MakeDataCount

Join our mailing list at

https://makedatacount.org/contact/

https://makedatacount.org

Page 47: Promoting Open Science Data Open Science Data Promotion Workshop…wdc2.kugi.kyoto-u.ac.jp/openscws/ws5ppt/18030103_Garza.pdf · 2018-03-06 · DataCite a quick snapshot Not-for-profit

ご静聴ありがとうご

ざいました

Visit:www.datacite.org