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PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

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Page 1: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508
Page 2: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508
Page 3: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508
Page 4: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

O

O

N

O

CH3O

OCH3O

OCH3OCH3

OH

OH

N

Page 5: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Why are some plants poisonous ?

Page 6: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Why are some plants poisonous ?

Herbivory

Page 7: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Why are some plants poisonous ?

A. Herbivory

B. How do plants protect themselvesagainst herbivory?

Page 8: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

1. Physical Protection

(spines, thorns, leaf hairs)

Page 9: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

1. Physical Protection(spines, thorns, leaf hairs)

2. Chemical protection that affects taste,smell or other physiological damage.

Page 10: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Poison – any substance, particularly chemical, that causes injury, illness or death.

Page 11: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Poison – any substance, particularly chemical, that causes injury, illness or death.

“All substances are poisonous; there is none which is not a poison. The right dose differentiates a poison and a remedy”

Paracelsus (1493 – 1541)

Page 12: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Poison – any substance, particularly chemical, that causes injury, illness or death.

“All substances are poisonous; there is none which is not a poison. The right dose differentiates a poison and a remedy”

Paracelsus (1493 – 1541)

Page 13: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Toxicant

Xenobiotic

Natural toxin

Phytotoxin

Mycotoxin

Page 14: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

“All substances are poisons; there is none which is not a poison. The right dose differentiates a poison and a remedy”

Paracelsus (1493 – 1541)

Page 15: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

“All substances are poisons; there is none which is not a poison. The right dose differentiates a poison and a remedy”

Paracelsus (1493 – 1541)

1. What ?

Page 16: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

“All substances are poisons; there is none which is not a poison. The right dose differentiates a poison and a remedy”

Paracelsus (1493 – 1541)

1. What ?

2. How Much ?

Page 17: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Classes of Toxins

Page 18: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Classes of Toxins

Alkaloids

N

OCH2 O

O

O

HO CH2OH

N

OH

OH

HHO

N

N

N

N

HO

O

H

N

OH

OH

OCH3

OCH3

CH3OO

CH3O

O

N

O

O

Page 19: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Classes of Toxins

Alkaloids

N

OCH2 O

O

O

HO CH2OH

N

OH

OH

HHO

N

N

N

N

HO

O

H

N

OH

OH

OCH3

OCH3

CH3OO

CH3O

O

N

O

O

Page 20: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Classes of Toxins

Alkaloids

N

OCH2 O

O

O

HO CH2OH

N

OH

OH

HHO

N

N

N

N

OH

OH

OCH3

OCH3

CH3OO

CH3O

O

N

O

O

N

HO

O

H

Page 21: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Metal-binding Compounds

OH

OH

O

O

Ca2+

Page 22: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Metal-binding Compounds

O

O

O

OCa

Page 23: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Phenolic compounds

OH

Page 24: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Phenolic compounds

HO

HO

OHHO O

OH

OH

OHOHO

Page 25: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Sesquiterpene Lactones

OO

Page 26: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Physiological Effects

hepatotoxins

neurotoxins

myotoxins

Page 27: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Identification of Plant Toxins

Page 28: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Identification of Plant Toxins

A. Need an appropriate biological assay for testing toxicity.

Page 29: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Identification of Plant Toxins

A. Need an appropriate biological assay for testing toxicity.

1. Cell, enzyme, chemical based assay.

Page 30: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Identification of Plant Toxins

A. Need an appropriate biological assay for testing toxicity.

1. Cell, enzyme, chemical based assay.

2. Small Animal Assay (mouse, rat).

Page 31: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Identification of Plant Toxins

A. Need an appropriate biological assay for testing toxicity.

1. Cell, enzyme, chemical based assay.

2. Small Animal Assay (mouse, rat).

3. Large Animal Assay (sheep, cow).

Page 32: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Bioassay guided chemical fractionation.

Page 33: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Bioassay guided chemical fractionation.

1. Chemical Extraction of Plant material.

Page 34: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Bioassay guided chemical fractionation.

1. Chemical Extraction of Plant material.2. Test extracts or residue with appropriate

bioassay.

Page 35: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Bioassay guided chemical fractionation.

1. Chemical Extraction of Plant material.2. Test extracts or residue with appropriate

bioassay.3. Continue fractionation of positive materials.

Page 36: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Bioassay guided chemical fractionation.

1. Chemical Extraction of Plant material.2. Test extracts or residue with appropriate

bioassay.3. Continue fractionation of positive materials.4. Assay new fractions.

Page 37: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Bioassay guided chemical fractionation.

1. Chemical Extraction of Plant material.2. Test extracts or residue with appropriate

bioassay.3. Continue fractionation of positive materials.4. Assay new fractions.5. Identification of chemical components in active

fractions.

Page 38: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Bioassay guided chemical fractionation.

1. Chemical Extraction of Plant material.2. Test extracts or residue with appropriate

bioassay.3. Continue fractionation of positive materials.4. Assay new fractions.5. Identification of chemical components in active

fractions.6. Assay of individual components.

Page 39: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Bioassay guided chemical fractionation.

1. Chemical Extraction of Plant material.2. Test extracts or residue with appropriate

bioassay.3. Continue fractionation of positive materials.4. Assay new fractions.5. Identification of chemical components in active

fractions.6. Assay of individual components.7. Confirmation of toxic compound in large

animal.

Page 40: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Bioassay guided chemical fractionation.

Page 41: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Analysis of Plant Toxins

Page 42: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Analysis of Plant Toxins

A. Plant Toxicity

Page 43: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Analysis of Plant Toxins

A. Plant Toxicity1. Concentration of toxin in the plant can be

measured.

% dry weight, mg/g, ppm, ppb

Page 44: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Analysis of Plant Toxins

A. Plant Toxicity and Toxic Dose.

1. Concentration of toxin in the plant can be measured.

2. Dose = Amount of plant material consumed

Page 45: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Analysis of Plant Toxins

A. Plant Toxicity and Toxic Dose.

1. Concentration of toxin in the plant can be measured.

2. Dose = Amount of plant material consumed

3. Toxic Dose = mg/kg of toxin required to induce the clinical signs of toxicity

Page 46: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Analysis of Plant Toxins

A. Plant Toxicity and Toxic Dose.

1. Concentration of toxin in the plant can be measured.

2. Dose = Amount of plant material consumed

3. Toxic Dose = mg/kg of toxin required to induce the clinical signs of toxicity.

4. Plant poisonings occur when 1 +2 > 3

Page 47: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Metabolic Fate of Toxins in Animal

Page 48: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

Rumen

oxidation

reductase

ICA, Acetyl-ICA, Succinyl-ICA

Liver Detected

Metabolites

CH2OH

CO2H

CH2OH

CO2H

CO2H

O

OH

CO2H

O

OH

CO2H

O

OH

Blood Serum

Circulatorysystem

esterase

1

4

CO2H

O

OH2CO2H

O

OH 3

2

3(soluble enzyme

oxidation)

5

Figure 9. Summary of proposed metabolism of isocupressic acid after ingestion by cattle. ICA (1) isocupressic acid; (2) agathic acid;(3) dihydroagathic acid; (4) imbricatoloic acid; (5) tetrahydroagathic acid. Bold arrows indicate proposed major pathway. Dashed arrows indicate pathway as proposed by Lin et al. (1998) with ICA oxidized to 2 and then reduced to 3.

Page 49: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Metabolic Fate of Toxins in Animal

1. Target compounds for diagnostics.

*

**

*

(13R)

(13S)

(13R)

(13S)RIC: m/z 397tetrahydroagathic acid

RIC: m/z 395dihydroagathic acid

TIC

2 4 6 8 10 12 14 16 18

Time (minutes)

Page 50: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

B. Metabolic Fate of Toxins in Animal

1. Target compounds for diagnostics.

2. Mechanism of toxicity.

Page 51: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

C. Diagnosis of Poisonous Plant Intoxications.

Page 52: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508
Page 53: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508
Page 54: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508
Page 55: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

D. Plant Taxonomy = Chemotaxonomy.

300 350 400 450 500 550 600 650 700 750 800

m/z

683

508

536468 578494404 627552346 726

508

683446 552 578482404346 538 711669

508

482468454 578552536 683372 627

683

697

578564494 669 739465 593360 436395

D. barbeyi(groups A&B)

D. occidentale(group C)

barbeyi x occidentale(group E)

D. glaucum(group D)

414

Page 56: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

D. Plant Taxonomy = Chemotaxonomy.

Page 57: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508
Page 58: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

The Whys and Wherefores of Quadrupole Ion Trap Mass Spectrometry

Page 59: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

The Whys and Wherefores of Quadrupole Ion Trap Mass Spectrometry

Page 60: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508
Page 61: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508
Page 62: PowerPoint Presentation - ars.usda.gov · PDF fileD. Plant Taxonomy = Chemotaxonomy. 300 350 400 450 500 550 600 650 700 750 800 m/z 683 508 536 346 404 468 494 552 578 627 726 508

qz = 4eV/mr2w2