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OpenEHR CLU.symptom_pain CLU.symptom CLU.issue CLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis EVAL.problem OBS.lab_test CLU. specimen OBS.imaging OBS.story Tentative mapping representation clinical finding clinical history image finding clinical picture vital sign clinical history taking preclinical finding laboratory finding symptom bodily feature of a patient sign diagnosis processual_entity physical examination Laboratory test OGMS

OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

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Page 1: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

OpenEHR

CLU.symptom_pain

CLU.symptom

CLU.issue CLU.event

SEC.vital_signs

CLU.inspection

CLU.exam

OBS.lab_test

CLU.specimen_preparation

OBS.story

EVAL.diagnosis

EVAL.problem

OBS.lab_test

CLU. specimen

OBS.imaging

OBS.story

Tentative mapping

representation

clinical finding

clinical history

image finding

clinical picture

vital sign

clinical history taking

preclinical finding

laboratory finding

symptom

bodily feature of a patient

sign

diagnosis

processual_entity

physical examination

Laboratorytest

OGMS

Page 2: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

OGMS integration approaches

RMAM

1. OGMS - AM mappings (ambiguity,

incompleteness)

OpenEHROGMS

Blood PressurePregnancy

Body Temperature

Pulse Medication order

2. Including OGMS terms as RM classes

AMParticulararchetypes

Disease core

3. Defining a new AM layer

Page 3: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

Translation from ADL to OWL

Observation

Event Series

Event_T

Item List

Element

Norton scale

Event Series

Status transition

List

General Physical Status

data

events

data

items

data

event

s

data

items

data

events

data

items

archetype definition

Terminology

Page 4: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

Ontology bindings

The term_binding section stores bindings between a particular term

within the archetype and an equivalent concept in an ontology

Page 5: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

Equivalence relationsBlood Pressure Arquetype Physiology ontology

By linking the classes through a Necesary & Suficient condition we allow a reasoner to check data correctness and data coherence while preserves the ontology modularity during its exploitation.

Page 6: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

Enriched archetypes

The Systolic pressure concept, defined in the archetype, is enriched

with properties and attributes from the

equivalent class within the Physiology

ontology

Page 7: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

Workflow(Translation+ Mapping + Inference)

ADL ArchetypeOntologizer

InstanceMapper

Inference

pat.data

riskdata

Reference Model

Archetype

data_norton_20080314.mdbdata_norton_20080314_result.mdb

1

2

3

SNOMED

Page 8: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

Currently a module within the OpenEHR Java Reference Implementation Project

Page 9: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis

Conclusions The Archetype Model should be improved in order to

prevent concept overlapping. Existing archetypes cover several concepts of the OGMS

ontology, although some ambiguities have been revealed. Three mapping approaches were presented for the

integration of the OGMS ontology : AM – OGMS, direct mapping.

Definition of the OGMS as a part of the Reference Model

Creation of a Disease layer between the RM and the AM

The translation from ADL to OWL offers several advantages for reusability, coherence checks and navigability between archetypes and clinical ontologies.

Page 10: OpenEHR CLU.symptom_pain CLU.symptom CLU.issueCLU.event SEC.vital_signs CLU.inspection CLU.exam OBS.lab_test CLU.specimen_preparation OBS.story EVAL.diagnosis