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OpenEHR
CLU.symptom_pain
CLU.symptom
CLU.issue CLU.event
SEC.vital_signs
CLU.inspection
CLU.exam
OBS.lab_test
CLU.specimen_preparation
OBS.story
EVAL.diagnosis
EVAL.problem
OBS.lab_test
CLU. specimen
OBS.imaging
OBS.story
Tentative mapping
representation
clinical finding
clinical history
image finding
clinical picture
vital sign
clinical history taking
preclinical finding
laboratory finding
symptom
bodily feature of a patient
sign
diagnosis
processual_entity
physical examination
Laboratorytest
OGMS
OGMS integration approaches
RMAM
1. OGMS - AM mappings (ambiguity,
incompleteness)
OpenEHROGMS
Blood PressurePregnancy
Body Temperature
Pulse Medication order
2. Including OGMS terms as RM classes
AMParticulararchetypes
Disease core
3. Defining a new AM layer
Translation from ADL to OWL
Observation
Event Series
Event_T
Item List
Element
Norton scale
Event Series
Status transition
List
General Physical Status
data
events
data
items
data
event
s
data
items
data
events
data
items
archetype definition
Terminology
Ontology bindings
The term_binding section stores bindings between a particular term
within the archetype and an equivalent concept in an ontology
Equivalence relationsBlood Pressure Arquetype Physiology ontology
By linking the classes through a Necesary & Suficient condition we allow a reasoner to check data correctness and data coherence while preserves the ontology modularity during its exploitation.
Enriched archetypes
The Systolic pressure concept, defined in the archetype, is enriched
with properties and attributes from the
equivalent class within the Physiology
ontology
Workflow(Translation+ Mapping + Inference)
ADL ArchetypeOntologizer
InstanceMapper
Inference
pat.data
riskdata
Reference Model
Archetype
data_norton_20080314.mdbdata_norton_20080314_result.mdb
1
2
3
SNOMED
Currently a module within the OpenEHR Java Reference Implementation Project
Conclusions The Archetype Model should be improved in order to
prevent concept overlapping. Existing archetypes cover several concepts of the OGMS
ontology, although some ambiguities have been revealed. Three mapping approaches were presented for the
integration of the OGMS ontology : AM – OGMS, direct mapping.
Definition of the OGMS as a part of the Reference Model
Creation of a Disease layer between the RM and the AM
The translation from ADL to OWL offers several advantages for reusability, coherence checks and navigability between archetypes and clinical ontologies.