NSU HPD NLM Update NSU HPD NLM Update based on presentations Originally Presented at based on presentations Originally Presented at

the MLA Annual Meetingthe MLA Annual MeetingMay 2007May 2007

by NLMby NLM

David Gillikin, Online Update David Gillikin, Online Update

Joyce Backus, MedlinePlusJoyce Backus, MedlinePlus

Maria Collins, DOCLINEMaria Collins, DOCLINE

Modified and updated by Todd J. PuccioModified and updated by Todd J. PuccioAugust 24, 2007August 24, 2007

PubMed / Medline IndexingPubMed / Medline Indexing► FY2006FY2006

629,000 indexed citations added to MEDLINE.629,000 indexed citations added to MEDLINE. Highest ever indexing rate (last year was 606,596 Highest ever indexing rate (last year was 606,596

indexed citations).indexed citations). 46,918 gene indexing links created (4% increase 46,918 gene indexing links created (4% increase

from last year).from last year).

► FY2007FY2007 175,177 citations indexed in during the 2175,177 citations indexed in during the 2ndnd

quarter, at a rate of over 700,000 articles per quarter, at a rate of over 700,000 articles per year.year.

More than 85% of MEDLINE citations now supplied More than 85% of MEDLINE citations now supplied electronically by publishers.electronically by publishers.

IndexingIndexing►Electronic Journal IndexingElectronic Journal Indexing

120 online-only journals indexed for 120 online-only journals indexed for MEDLINE, an increase from 107 a year MEDLINE, an increase from 107 a year ago.ago.

276 additional journals - the online 276 additional journals - the online version is indexed instead of the print version is indexed instead of the print version.version.

Bioethics Information Bioethics Information ResourcesResources

►Web resource developed to provide Web resource developed to provide additional support to the subject of additional support to the subject of bioethics.bioethics.

► www.nlm.nih.gov/bsd/bioethics.htmlwww.nlm.nih.gov/bsd/bioethics.html►Main links on: Main links on:

PubMed Special Queries page.PubMed Special Queries page. List of NLM Databases and Resources on List of NLM Databases and Resources on

the NLM Home page.the NLM Home page.

OLDMEDLINEOLDMEDLINE►Mapping OLDMEDLINE Keywords to Mapping OLDMEDLINE Keywords to

current MeSH:current MeSH: 76% of citations mapped completely (over 76% of citations mapped completely (over

1.34 million citations).1.34 million citations). These completed records are now converted These completed records are now converted

to the status [PubMed – Indexed for MEDLINE].to the status [PubMed – Indexed for MEDLINE]. Work continues on mapping the additional Work continues on mapping the additional

keywords.keywords.►Conversion of the citations from the 1949 Conversion of the citations from the 1949

Current List of Medical Literature (CLML)Current List of Medical Literature (CLML) has begun.has begun.

PubMedPubMed

►PubMed – surpassed 17 million PubMed – surpassed 17 million records records

►MEDLINE – over 15.8 million MEDLINE – over 15.8 million (93%)(93%)

► In Process records – over 252,000 In Process records – over 252,000 (1.5%)(1.5%)

►OLDMEDLINE – over 420,000 OLDMEDLINE – over 420,000 (2.5%)(2.5%)

►PubMed-only records – over 524,000 PubMed-only records – over 524,000 (3%)(3%)

PubMed EnhancementsPubMed Enhancements

►New version of the Entrez system New version of the Entrez system being developed.being developed.

►Beta version made available for review Beta version made available for review this spring.this spring.

►New system to be coming online soon.New system to be coming online soon.►Foundation for the next generation of Foundation for the next generation of

features and capabilities on Entrez features and capabilities on Entrez databases, including PubMed.databases, including PubMed.

PubMed EnhancementsPubMed Enhancements► AbstractPlus viewAbstractPlus view

New default viewNew default view Single citation display – customizable selection using My Single citation display – customizable selection using My

NCBINCBI Library iconsLibrary icons

►New system version displays a single library icon in New system version displays a single library icon in upper right hand corner – different size (100 pixels x upper right hand corner – different size (100 pixels x 25 pixels)25 pixels)

►If users activate more than one icon, the icon displayed If users activate more than one icon, the icon displayed at the top will be selected according to the following at the top will be selected according to the following priority:priority:

Library LinkOut full text icon Library LinkOut full text icon Library LinkOut print icon Library LinkOut print icon Outside Tool icon Outside Tool icon

AbstractPlusAbstractPlus

PMC Scanning ProjectPMC Scanning Project

► Journal Back Issues loaded to PubMed.Journal Back Issues loaded to PubMed. 39 Completed Journals and growing.39 Completed Journals and growing. 70,231 total citations added.70,231 total citations added. From journals such as PNAS, Plant From journals such as PNAS, Plant

Physiology, Journal of Physiology, Journal of Physiology, Journal of Physiology, Journal of Clinical Pathology, and Journal of AnatomyClinical Pathology, and Journal of Anatomy

►Next step, adding abstracts found in Next step, adding abstracts found in PMC citations not found in PubMed PMC citations not found in PubMed Citations.Citations.

PMC Scanning ProjectPMC Scanning Project

►From the 38 completed PMC back From the 38 completed PMC back issue scanned titles:issue scanned titles: 40,640 new abstracts added from 23 40,640 new abstracts added from 23

titles.titles. 15 titles did not have new abstracts to 15 titles did not have new abstracts to

add.add.

►Process now part of standard workflow Process now part of standard workflow for PMC scanned citations to be for PMC scanned citations to be included in MEDLINE/PubMed.included in MEDLINE/PubMed.

33rdrd Party Back Issue Citations Party Back Issue Citations► Publisher requests to include their retrospective Publisher requests to include their retrospective

data.data.► Goal: Goal:

Load citations for journal issues not previously Load citations for journal issues not previously included in MEDLINE/PubMed.included in MEDLINE/PubMed.

New citations published from 1966 and up will be put New citations published from 1966 and up will be put into MEDLINE format.into MEDLINE format.

These citations will not be indexed with MeSH.These citations will not be indexed with MeSH. Also, add abstracts from Publisher citations that are Also, add abstracts from Publisher citations that are

not found in MEDLINE citations.not found in MEDLINE citations.

► Slow process, dependent upon QA testing and Slow process, dependent upon QA testing and review.review.

NCBI / Genetic Alliance Web NCBI / Genetic Alliance Web ResourceResource

►New Web site feature on New Web site feature on www.geneticalliance.orgwww.geneticalliance.org site. site.

►Accessed through the “Disease Accessed through the “Disease InfoSearch” feature.InfoSearch” feature.

►Designed to help patients, care givers, Designed to help patients, care givers, and health professionals easily locate & and health professionals easily locate & navigate information on genetic navigate information on genetic disorders.disorders.

NCBI / Genetic Alliance Web NCBI / Genetic Alliance Web ResourceResource

TrainingTraining► NLM TheaterNLM Theater

http://www.nlm.nih.gov/pubs/techbull/mj07/mj07_mla_theater_ppt.htmlhttp://www.nlm.nih.gov/pubs/techbull/mj07/mj07_mla_theater_ppt.html

Over 14 NLM products and services are being discussed Over 14 NLM products and services are being discussed and demonstrated.and demonstrated.

Experimenting with recording the theater presentations Experimenting with recording the theater presentations with Adobe Connect, and posting them on the NLM Web with Adobe Connect, and posting them on the NLM Web site along with the PowerPoint slides.site along with the PowerPoint slides.

► Working with NTCC to develop live online clinics Working with NTCC to develop live online clinics on using NLM products and serviceson using NLM products and services Beginning in August – brief session on searching for Beginning in August – brief session on searching for

chemicals and drugs in PubMedchemicals and drugs in PubMed

DailyMedDailyMed

►http://http://dailymed.nlm.nih.govdailymed.nlm.nih.gov//►Provides high quality information Provides high quality information

about marketed drugs. about marketed drugs. ► Includes FDA approved labels Includes FDA approved labels

(package inserts).(package inserts).►2,629 approved prescription drugs 2,629 approved prescription drugs

included in the database.included in the database.

Specialized Information Services (SIS)Specialized Information Services (SIS)► TOXLINE Unified TOXLINE Unified - Search results from TOXLINE Core & TOXLINE - Search results from TOXLINE Core & TOXLINE

Special merged. Subset of MedlineSpecial merged. Subset of Medline► TOXNET TOXNET http://toxnet.nlm.nih.gov/ including Household ProductDatabasehttp://toxnet.nlm.nih.gov/ including Household ProductDatabase

► TOX MAP: TOX MAP: Enhanced, more accurate map presentations.Enhanced, more accurate map presentations. Improved location data using enhanced data from EPA.Improved location data using enhanced data from EPA. Includes 2005 Toxics Release Inventory (TRI) data.Includes 2005 Toxics Release Inventory (TRI) data.

► ToxMysteryToxMystery launched – interactive learning site for 7–10 launched – interactive learning site for 7–10 year olds.year olds.

► ToxTownToxTown – – Toxicology learning resource for childrenToxicology learning resource for children► WISER 2.3 WISER 2.3 Hazardous material resource for First Hazardous material resource for First

Responders.Responders.► ToxSeekToxSeek http://toxseek.nlm.nih.gov/http://toxseek.nlm.nih.gov/ updated with an enhanced updated with an enhanced

meta-search engine and clustering tool.meta-search engine and clustering tool.

Specialized Information Services (SIS)Specialized Information Services (SIS)

► Genetics Home Reference Genetics Home Reference http://ghr.nlm.nih.gov/http://ghr.nlm.nih.gov/

► OMIM (Online Mendelian Inheritance in Man) OMIM (Online Mendelian Inheritance in Man) http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIMhttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM

► ChemIDPlus ChemIDPlus http://chem2.sis.nlm.nih.gov/chemidplus/chemidlite.jsphttp://chem2.sis.nlm.nih.gov/chemidplus/chemidlite.jsp

► List of NLMList of NLM Databases and Resources Databases and Resources

MedlinePlus UpdateMedlinePlus Update

►Where in the world is MedlinePlus?Where in the world is MedlinePlus?►What’s new? – health topic pagesWhat’s new? – health topic pages►NIHSeniorHealth - new topics and NIHSeniorHealth - new topics and

videosvideos►What’s coming? – RSS and searchWhat’s coming? – RSS and search

MedlinePlusMedlinePlus Today TodayHealth topics:

740 English (19,000 links)

704 Spanish (5,500 links)

Drug database and herbals & supplements database: approx 1000 monographs

Encyclopedia: approx 3700 articles; 2300 images

Health news: Approx 15-20 stories per day

Directories: Over 100 directories of doctors, hospitals, clinics and libraries.

GoLocal: 21 sites

Interactive tutorials: 175

Links to ClinicalTrials.gov 776

NIHSeniorhealth:

31 topics

Surgeries: 148 videos

Email lists: 11 daily & weekly

One weekly podcast

Magazine:4 issues

Dictionary

MedlinePlusMedlinePlus en españolen español

Health topics:

740 English (19,000 links)

704 Spanish (5,500 links)

Drug database and herbals & supplements database: approx 1000 monographs

Encyclopedia: approx 3700 articles; 2300 images

Health news: Approx 15-20 stories per day

Interactive tutorials: 175

Surgeries

Email lists: daily & weekly

Health Topics Homepage – 1998Health Topics Homepage – 1998

Health topics page - 1999Health topics page - 1999

Health topics page - 2001Health topics page - 2001

Health topic page – 2000Health topic page – 2000

Health topic page - 2001Health topic page - 2001

• Long list of links with lots of scrolling

• Another click to get to “real” information

• Lots of words and links but no pictures and little white space

NIHSeniorHealth UpdateNIHSeniorHealth Update

►Flash VideoFlash Video►New topicsNew topics►New home pageNew home page

Play starts and pauses the video

Restarts video from the beginning

Closes the video window

Volume slider

Status bar indicates total length of video and current progress

Transcript opens the captioning text in a separate window

Slider for fast forwarding and rewinding

New banner

New Topics (Since May 2006)New Topics (Since May 2006)

►Five new topics (32 total):Five new topics (32 total): Heart Attack (NHLBI)Heart Attack (NHLBI) Paget's Disease of Bone (NIAMS)Paget's Disease of Bone (NIAMS) High Blood Pressure (NHLBI)High Blood Pressure (NHLBI) Falls and Older Adults (NIA)Falls and Older Adults (NIA) Depression (NIMH)Depression (NIMH) Skin Cancer (NCI)Skin Cancer (NCI)

NIHSeniorHealth HomepageNIHSeniorHealth Homepage

or

►NIH Radio NIH Radio http://www.nih.gov/news/radio/index.hthttp://www.nih.gov/news/radio/index.htmm

►NIH PodCasts NIH PodCasts http://www.nih.gov/news/radio/nihpodchttp://www.nih.gov/news/radio/nihpodcast.htmast.htm

RSS feeds & PodCastsRSS feeds & PodCasts

RSS feeds & PodCastsRSS feeds & PodCasts►NLM RSS & PodcastsNLM RSS & Podcasts

http://www.nlm.nih.gov/listserv/rss_podcasts.hthttp://www.nlm.nih.gov/listserv/rss_podcasts.htmlml

► MedlinePlus: NLM Director's Comments MedlinePlus: NLM Director's Comments podcastpodcast

RSS feeds & PodCastsRSS feeds & PodCasts

NLM DatabasesNLM Databases

►NLM Databases & Electronic NLM Databases & Electronic Resources :Resources : Complete List Complete List http://www.nlm.nih.gov/databases/http://www.nlm.nih.gov/databases/

►NLM Gateway NLM Gateway

Combined Federated Search of the NLM Combined Federated Search of the NLM Databases Databases

http://gateway.nlm.nih.gov/gw/Cmdhttp://gateway.nlm.nih.gov/gw/Cmd