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Biopsy-Free Tests for Disease Diagnosis and Monitoring NeoLAB for Hematologic Diseases Cell-free DNA/RNA analysis on plasma

NeoLAB Liquid Biopsy for Hematologic Diseases · 2 • NeoGenomics Laboratories. Cell-free circulating tumor DNA/RNA analysis on plasma to reduce the need for bone marrow biopsy procedures

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Page 1: NeoLAB Liquid Biopsy for Hematologic Diseases · 2 • NeoGenomics Laboratories. Cell-free circulating tumor DNA/RNA analysis on plasma to reduce the need for bone marrow biopsy procedures

Biopsy-Free Tests for Disease Diagnosis and Monitoring

NeoLAB™ for Hematologic Diseases

Cell-free DNA/RNA analysis on plasma

Page 2: NeoLAB Liquid Biopsy for Hematologic Diseases · 2 • NeoGenomics Laboratories. Cell-free circulating tumor DNA/RNA analysis on plasma to reduce the need for bone marrow biopsy procedures

2 • NeoGenomics Laboratories

Cell-free circulating tumor DNA/RNA analysis on plasma to reduce the need for bone marrow biopsy procedures

NeoLAB Liquid Biopsy for Hematologic Diseases

Benefits of NeoLAB cell-free hematologic tumor analysis• Sensitive assessment of therapy effectiveness and disease progress

• Allows more frequent monitoring due to non-invasive collection method

• Removes potential for missing patchy disease in marrow collection;plasma is homogeneous

• Spares patients an invasive, uncomfortable, and expensive procedure

Test InformationNeoLAB™ cell-free plasma DNA/RNA testing for hematologic diseases provides a better testing alternative that doesn’t require bone marrow samples. Our scientists and others pioneered this work in hematologic disease over the past 10+ years, and now it is available for clinical use through a simple blood draw and routine shipping to our licensed, accredited molecular laboratory.

This line of testing is based on the principle that hematopoietic cells in bone marrow are immersed in blood. Since cancer cells have high turnover, they pour their DNA/RNA into circulation as cell-free DNA/RNA. Our new tests use proprietary methods to extract these circulating nucleic acids and analyze them using next generation sequencing and other advanced methods in order to evaluate molecular abnormalities present in hematological cancers.

Clinical Applications• Screening for diagnostic mutations in

suspected myeloid disorders to determineif bone marrow biopsy is absolutelynecessary

• Monitoring disease status andresponse to therapy

• Predicting early relapse• When bone marrow sample is inadequate

(dry tap, insufficient quantity) or unavailable• When bone marrow biopsy procedure is

contraindicated (especially with fragile andpediatric patients)

Page 3: NeoLAB Liquid Biopsy for Hematologic Diseases · 2 • NeoGenomics Laboratories. Cell-free circulating tumor DNA/RNA analysis on plasma to reduce the need for bone marrow biopsy procedures

NeoGenomics Laboratories • 3

Ordering InformationSpecimen options: Peripheral blood: 2 x 6 mL EDTA tubes (total 12 mL) or 10 mL in EDTA tube

Storage and transportation: Use cold pack for transport, making sure cold pack is not in direct contact with specimen. Ship same day as drawn whenever possible; specimens <72 hours old preferred.

Turnaround Time: 7-14 days. Varies by test.

Available NeoLAB Liquid Biopsy plasma-based testsMultiplex NeoLAB Profiles

AML Profile

ASXL1 BCOR BRAF

CEBPA CSF3R DNMT3A

ETV6 EZH2 FLT3

HRAS IDH1 IDH2

JAK2 V617F JAK2 Exon 12+14

KIT KMT2A (MLL) KRAS

NPM1 NRAS PDGFRA

PHF6 PTPN11 RUNX1

SETBP1 STAG2 TET2

TP53WT1

BTK Inhibitor Acquired Resistance Panel

BTK PLC-Gamma-2

MDS/CMML Profile

ASXL1 BCOR BCORL1 BRAF

CBL CEBPA CUX1 DNMT3A

ETV6 EZH2 FLT3 HRAS

IDH1 IDH2 JAK2 V617F JAK2 Exon 12+14

KIT KRAS NPM1 NRAS

PDGFRA PTEN PTPN11 RUNX1

SETBP1 SF3B1 SRSF2 STAG2

TET2 TP53 U2AF1 ZRSR2

Myeloid Disorders Profile

ABL1 ASXL1 ATRX BCOR BCORL1 BRAF

CALR CBL CBLB CBLC CDKN2A CEBPA

CSF3R CUX1 DNMT3A ETV6 EZH2 FBXW7

FLT3 GATA1 GATA2 GNAS HRAS IDH1

IDH2 IKZF1 JAK2 V617F JAK2 Exon 12+14 JAK3 KDM6A

KIT KRAS KMT2A(MLL) MPL MYD88 NOTCH1

NPM1 NRAS PDGFRA PHF6 PTEN PTPN11

RAD21 RUNX1 SETBP1 SF3B1 SMC1A SMC3

SRSF2 STAG2 TET2 TP53 U2AF1 WT1

ZRSR2

Single Gene NeoLABsFLT3 Mutation Analysis IDH1 Mutation AnalysisIDH2 Mutation Analysisinv(16), CBFB-MYH11 Translocation

KIT (c-KIT) Mutation AnalysisKRAS Mutation AnalysisNPM1 Mutation AnalysisNRAS Mutation Analysis

PML-RARA Translocation, t(15;17)RUNX1-RUNX1T1 (AML1-ETO) Translocation, t(8;21)

Note: These NeoLABs are provided for hematologic disease indications only. Please do not submit samples from patients with solid tumors.

Page 4: NeoLAB Liquid Biopsy for Hematologic Diseases · 2 • NeoGenomics Laboratories. Cell-free circulating tumor DNA/RNA analysis on plasma to reduce the need for bone marrow biopsy procedures

12701 Commonwealth Dr., Suite 9Fort Myers, FL 33913 Phone: 866.776.5907/ Fax: 239.690.4237 neogenomics.com© 2018 NeoGenomics Laboratories, Inc. All Rights Reserved. All other trademarks are the property of their respective owners.Rev. 022118

References1. Determining tumor load and biallelic mutation in patients with CALR mutation using peripheral blood plasma [abstract]. Diep K, Ma W,

Albitar F, De Dios I, Agersborg S, Thangavelu M, Brodie S, Albitar M. Blood. 2014;124(21):abstract 1818. 2. Deep sequencing of peripheral blood plasma DNA as a reliable test for confirming the diagnosis of myelodysplastic syndrome

[abstract]. Albitar F, Ma W, Diep K, De Dios I, Agersborg S, Thangavelu M, Brodie S, Albitar M. Blood. 2014;124(21):abstract 1909. 3. Minimal residual disease-based risk stratification in Chinese childhood acute lymphoblastic leukemia by f low cytometry and plasma

DNA quantitative polymerase chain reaction. Cheng SH, Lau KM, Li CK, et al. PLoS One. 2013;8(7):e69467. 4. MPL mutation profile in JAK2 mutation-negative patients with myeloproliferative disorders. Ma W, Zhang X, Wang X, Zhang Z, Yeh CH,

Uyeji J, Albitar M. Diagn Mol Pathol. 2011;20(1):34-9. 5. Increased integrity of circulating cell-free DNA in plasma of patients with acute leukemia. Gao YJ, He YJ, Yang ZL, et al. Clin Chem Lab

Med. 2010;48(11):1651-6. 6. JAK2 exon 14 deletion in patients with chronic myeloproliferative neoplasms. Ma W, Kantarjian H, Zhang X, Wang X, Zhang Z, Yeh CH,

O’Brien S, Giles F, Bruey JM, Albitar M. PLoS One. 2010;5(8):e12165. 7. Plasma levels of JAK2 mRNA in patients with chronic myeloproliferative diseases with and without V617F mutation: implications for

prognosis and disease biology. Ma W, Kantarjian H, Zhang X, Yeh CH, Zhang ZJ, Verstovsek S, O’Brien S, Giles F, Albitar M. Int J Lab Hematol. 2010;32(1 Pt 2):95-102.

8. Detection of nucleophosmin gene mutations in plasma from patients with acute myeloid leukemia: clinical significance and implications. Ma W, Kantarjian H, Zhang X, Jilani I, Sheikholeslami MR, Donahue AC, Ravandi F, Estey E, O’Brien S, Keating M, Giles FJ, Albitar M. Cancer Biomark. 2009;5(1):51-8.

9. Plasma-based detection of clonality in lymphoid malignancies. Yeh CH, Tseng R, Albitar M. Eur J Haematol. 2009;82(6):450-3. 10. Quantification of free total plasma DNA and minimal residual disease detection in the plasma of children with acute lymphoblastic

leukemia. Schwarz AK, Stanulla M, Cario G, et al. Ann Hematol. 2009;88(9):897-905. 11. Higher detection rate of JAK2 mutation using plasma. Ma W, Kantarjian H, Zhang X, Sun W, Buller AM, Jilani I, Schwar tz JG, Giles F,

Albitar M. Blood. 2008;111(7):3906-7. 12. Plasma-based testing as a new paradigm for clinical testing in hematologic diseases. Giles FJ, Albitar M. Exper t Rev Mol Diagn.

2007;7(5):615-23. 13. Plasma RNA as an alternative to cells for monitoring molecular response in patients with chronic myeloid leukemia. Ma W, Tseng R,

Gorre M, Jilani I, Keating M, Kantarjian H, Cor tes J, O’Brien S, Giles F, Albitar M. Haematologica. 2007;92(2):170-5. 14. Heterogeneity in detecting Abl kinase mutations and bet ter sensitivity using circulating plasma RNA. Ma W, Kantarjian H, Jilani I, Gorre

M, Bhalla K, Ot tmann O, Giles F, Albitar M. Leukemia. 2006;20(11):1989-91. 15. Hemizygous/homozygous and heterozygous JAK2 mutation detected in plasma of patients with myeloproliferative diseases: correlation

with clinical behaviour. Ma W, Kantarjian H, Verstovsek S, Jilani I, Gorre M, Giles F, Cor tes J, O’Brien S, Keating M, Albitar M. Br J Haematol. 2006;134(3):341-3.

16. Plasma as a source of mRNA for determining IgV(H) mutation status in patients with chronic lymphocytic leukaemia. Ma W, Jilani I, Gorre M, Keating M, Chan H, Tseng R, Kantarjian H, O’Brien S, Giles FJ, Albitar M. Br J Haematol. 2006;133(6):690-2.

17. Relative increase in leukemia-specific DNA in peripheral blood plasma from patients with acute myeloid leukemia and myelodysplasia. Rogers A, Joe Y, Manshouri T, Dey A, Jilani I, Giles F, Estey E, Freireich E, Keating M, Kantarjian H, Albitar M. Blood. 2004;103(7): 2799-801.

18. Use of plasma DNA in detection of loss of heterozygosity in patients with multiple myeloma. Ahmed M, Giles F, Joe Y, Weber DM, Jilani I, Manshouri T, Giralt S, De Lima M, Keating M, Albitar M. Eur J Haematol. 2003;71(3):174-8.

19. Bet ter detection of FLT3 internal tandem duplication using peripheral blood plasma DNA. Jilani I, Estey E, Manshuri T, Caligiuri M, Keating M, Giles F, Thomas D, Kantarjian H, Albitar M. Leukemia. 2003;17(1):114-9.

NeoGenomics Laboratories is a specialized oncology reference laboratory providing the latest technologies, testing partnership opportunities, and interactive education to the oncology and pathology communities. We offer the complete spectrum of diagnostic services in molecular testing, FISH, cytogenetics, flow cytometry, and immunohistochemistry through our nation-wide network of CAP-accredited, CLIA-certified laboratories.

Committed to research as the means to improve patient care, we provide Pharma Services for pharmaceutical companies, in vitro diagnostic manufacturers, and academic scientist-clinicians. We promote joint publications with our client physicians. NeoGenomics welcomes your inquiries for collaborations. Please contact us for more information.