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Minireview Multivoxel Magnetic Resonance Spectroscopy of Brain Tumors 1 Sarah J. Nelson 2 Magnetic Resonance Science Center, University of California San Francisco, San Francisco, California 94143-1290 Abstract Magnetic resonance spectroscopy (MRS) is becoming more widely available for clinical applications and is able to provide information about the metabolic properties of regions of normal and abnormal tissue morphology. A critical question for the clinical management of patients with brain tumors is whether multivoxel MRS is able to add new information to the high-quality anatomical data provided by conventional MR imaging techniques and whether this information is relevant for the diagnosis and clinical management of such patients. In this article, the state of the art for acquiring and analyzing multivoxel MRS data is reviewed and placed in context relative to imaging findings for metastatic and primary brain tumors. The MRS data are seen to provide unique information that when combined with high-quality anatomical MR images has implications for defining tumor type and grade, directing biopsy or surgical resection, planning focal radiation or biological therapies, and understanding the mechanisms of success and failure of new treatments. Introduction Although patients with brain tumors typically have a relatively poor prognosis, the time to progression and median survival can be mediated for selected subpopulations of patients by applying aggressive therapy (1–7). Selecting the treatment that is most appropriate for a specific patient and directing that therapy to the region of active tumor is crucial for achiev- ing the best possible outcome. Critical factors in evaluating prognosis are tumor type, grade, and volume (1, 5, 8, 9). Despite the excellent soft tissue contrast provided by MRI 3 , the sensitivity and specificity with which this modality defines tumor type and grade is limited. This is partly attributable to the existence of Gadolinium-enhanced necrosis that may be mistaken for tumor and partly to the difficulty in distinguish- ing between tumor, edema, and nonspecific treatment ef- fects in the region of hypointensity on T2-weighted images (10, 11). Overcoming these problems requires the development of new imaging modalities that highlight functional or metabolic properties of the tumor. Although there have been studies that have investigated positron emission tomography and single photon emission tomography as candidates for such analysis (12–15), there would be a considerable savings in cost and patient discomfort if similar information could be defined using an MR methodology. Two new imaging meth- ods that have been considered for this application are per- fusion-weighted and diffusion-weighted MRI (16 –23). These make use of echo planar pulse sequences to examine the tissue architecture and microvasculature in the lesion and surrounding brain parenchyma. Although they do provide information about physiological properties of the tumor that have been linked to cellularity, structural integrity, and an- giogenesis, they are not yet used routinely for clinical man- agement of patients. Single voxel proton MR spectroscopy has been applied for characterizing the metabolic signatures of brain tumors for some time (24 –32). There is strong evidence for a reduction in N-acetylaspartate and increase in choline containing com- pounds in tumor relative to normal brain parenchyma (28, 29). Also, for some metastatic lesions and for high-grade gliomas, typically, there are resonances corresponding to lactate or lipids (26, 27). Initial reports concerning the poten- tial for single voxel MRS in tumor grading gave varied results with a large variability in data quality between institutions (30). With the introduction of automated packages for per- forming single voxel proton MRI on clinical scanners, the quality and reproducibility of the data have been improved. Multivariate statistical analysis procedures have also been applied in an attempt to identify patterns that characterize specific tumor types and grades (31, 32). More recent studies have also included the acquisition of spectra with both short and long echo times so that levels of myo-inositol, glutamine, and glutamate can be included in the analysis and provide the potential for improved discrimination between different types of lesions (33, 34). Although single voxel proton MRS is a relatively rapid method for obtaining information about the metabolism in a 4 – 8-cc region within the lesion, it does not address spatial heterogeneity and is unable to contribute to defining the spatial extent of the lesion. These factors are particularly important for planning focal treatments such as radiation and surgical resection and for following response to therapy. To address these issues, it is necessary to consider multivoxel proton MRSI (1-H). In this article, we examine the limitations of conventional MRI for metastatic and primary brain tumors, Received 12/12/02; accepted 1/28/03. 1 Parts of this work were funded by NIH Grants CA79719 and CA59880. 2 To whom requests for reprints should be addressed, Magnetic Reso- nance Science Center, Box 1290, 1 Irving Street, University of California, San Francisco, CA 94143-1290. 3 The abbreviations used are: MRI, magnetic resonance imaging; MRS, magnetic resonance spectroscopy; MRSI, magnetic resonance spectro- scopic imaging; CNI, choline to N-acetylaspartate index; PRESS, point resolved acquisition mode. 497 Vol. 2, 497–507, May 2003 Molecular Cancer Therapeutics Research. on October 15, 2020. © 2003 American Association for Cancer mct.aacrjournals.org Downloaded from

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Page 1: Minireview - Home | Molecular Cancer Therapeutics · lesions within the brain influences the decision as to whether the most appropriate treatment is surgery, radiosurgery, or whole

Minireview

Multivoxel Magnetic Resonance Spectroscopy ofBrain Tumors1

Sarah J. Nelson2

Magnetic Resonance Science Center, University of California SanFrancisco, San Francisco, California 94143-1290

AbstractMagnetic resonance spectroscopy (MRS) is becomingmore widely available for clinical applications and isable to provide information about the metabolicproperties of regions of normal and abnormal tissuemorphology. A critical question for the clinicalmanagement of patients with brain tumors is whethermultivoxel MRS is able to add new information to thehigh-quality anatomical data provided by conventionalMR imaging techniques and whether this informationis relevant for the diagnosis and clinical managementof such patients. In this article, the state of the artfor acquiring and analyzing multivoxel MRS data isreviewed and placed in context relative to imagingfindings for metastatic and primary brain tumors. TheMRS data are seen to provide unique information thatwhen combined with high-quality anatomical MRimages has implications for defining tumor typeand grade, directing biopsy or surgical resection,planning focal radiation or biological therapies, andunderstanding the mechanisms of success and failureof new treatments.

IntroductionAlthough patients with brain tumors typically have a relativelypoor prognosis, the time to progression and median survivalcan be mediated for selected subpopulations of patients byapplying aggressive therapy (1–7). Selecting the treatmentthat is most appropriate for a specific patient and directingthat therapy to the region of active tumor is crucial for achiev-ing the best possible outcome. Critical factors in evaluatingprognosis are tumor type, grade, and volume (1, 5, 8, 9).Despite the excellent soft tissue contrast provided by MRI3,the sensitivity and specificity with which this modality definestumor type and grade is limited. This is partly attributable tothe existence of Gadolinium-enhanced necrosis that may bemistaken for tumor and partly to the difficulty in distinguish-

ing between tumor, edema, and nonspecific treatment ef-fects in the region of hypointensity on T2-weighted images(10, 11).

Overcoming these problems requires the development ofnew imaging modalities that highlight functional or metabolicproperties of the tumor. Although there have been studiesthat have investigated positron emission tomography andsingle photon emission tomography as candidates for suchanalysis (12–15), there would be a considerable savings incost and patient discomfort if similar information could bedefined using an MR methodology. Two new imaging meth-ods that have been considered for this application are per-fusion-weighted and diffusion-weighted MRI (16–23). Thesemake use of echo planar pulse sequences to examine thetissue architecture and microvasculature in the lesion andsurrounding brain parenchyma. Although they do provideinformation about physiological properties of the tumor thathave been linked to cellularity, structural integrity, and an-giogenesis, they are not yet used routinely for clinical man-agement of patients.

Single voxel proton MR spectroscopy has been applied forcharacterizing the metabolic signatures of brain tumors forsome time (24–32). There is strong evidence for a reductionin N-acetylaspartate and increase in choline containing com-pounds in tumor relative to normal brain parenchyma (28,29). Also, for some metastatic lesions and for high-gradegliomas, typically, there are resonances corresponding tolactate or lipids (26, 27). Initial reports concerning the poten-tial for single voxel MRS in tumor grading gave varied resultswith a large variability in data quality between institutions(30). With the introduction of automated packages for per-forming single voxel proton MRI on clinical scanners, thequality and reproducibility of the data have been improved.Multivariate statistical analysis procedures have also beenapplied in an attempt to identify patterns that characterizespecific tumor types and grades (31, 32). More recent studieshave also included the acquisition of spectra with both shortand long echo times so that levels of myo-inositol, glutamine,and glutamate can be included in the analysis and providethe potential for improved discrimination between differenttypes of lesions (33, 34).

Although single voxel proton MRS is a relatively rapidmethod for obtaining information about the metabolism in a4–8-cc region within the lesion, it does not address spatialheterogeneity and is unable to contribute to defining thespatial extent of the lesion. These factors are particularlyimportant for planning focal treatments such as radiation andsurgical resection and for following response to therapy. Toaddress these issues, it is necessary to consider multivoxelproton MRSI (1-H). In this article, we examine the limitationsof conventional MRI for metastatic and primary brain tumors,

Received 12/12/02; accepted 1/28/03.1 Parts of this work were funded by NIH Grants CA79719 and CA59880.2 To whom requests for reprints should be addressed, Magnetic Reso-nance Science Center, Box 1290, 1 Irving Street, University of California,San Francisco, CA 94143-1290.3 The abbreviations used are: MRI, magnetic resonance imaging; MRS,magnetic resonance spectroscopy; MRSI, magnetic resonance spectro-scopic imaging; CNI, choline to N-acetylaspartate index; PRESS, pointresolved acquisition mode.

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discuss techniques for obtaining 1-H MRSI of brain tumors,and present examples of situations in which the informationthat is obtained differs from conventional MRI. The objectivewill be to highlight situations where the 1-H MRSI has thepotential for changing the clinical management of the patientand thereby make a significant contribution to improving theoutcome. We will focus on the application to adult braintumors as the types of lesions that occur in pediatric patientsand prognosis are quite different.

MRI of Metastatic LesionsFor these lesions, the volume of Gadolinium enhancement onT1-weighted spin echo or gradient echo images is thought toencompass all of the active tumor. In many cases, there arealso central regions of hypointensity within the enhancinglesion that correspond to necrosis. The region of hypointen-sity on the T1-weighted image and corresponding hyperin-tensity on T2-weighted images that typically surrounds theenhancing volume is thought to correspond to edema ornonspecific treatment effects rather than to infiltrative tumor.Detection of small lesions and improved visualization oflarger enhancing lesions is possible using double or tripledoses of Gadolinium (35). The number and size of metastatic

lesions within the brain influences the decision as to whetherthe most appropriate treatment is surgery, radiosurgery, orwhole brain radiation therapy (5–7). Other factors taken intoaccount are the status of the primary lesion and metastasesin other organs.

Fig. 1 gives three examples of Gadolinium-enhancedT1-weighted and T2-weighted images from patients withbrain metastases. The first patient had a metastasis frommelanoma. Even at this time, the lesion had a small centralregion of hyperintensity corresponding to necrosis. It grewrapidly and survival was only for an additional 2 months.The second patient had a large region of central necrosisat the time of presentation for this scan. The primary lesionwas from lung and was stable at this time. Despite treat-ment with gamma knife radiosurgery, the lesion did notrespond, and the patient survived an additional 3 months.The third patient also had a primary lung lesion and hadreceived prior radiation therapy for the metastasis on theleft side of the brain. The enhancing lesion in the vermiswas seen as a new lesion on a follow-up imaging study.Treatment at this time was by gamma knife radiosurgery toboth the original and the new lesion. After radiosurgery,there was a significant reduction in the size of the newer

Fig. 1. Post-Gadolinium T1-weighted and T2-weighted MR images from 3 patients with brain metastases. The patient on the left has a metastasis froma melanoma, the patient in the center has a lung metastasis, and the patient on the right has two lung metastases.

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lesion and the patient survived an additional 33 monthswith no additional treatment.

MRI of Primary Brain TumorsGadolinium-enhanced T1-weighted MR images from 12 pa-tients with gliomas are seen in Fig. 2. These are the mostcommon types of primary brain tumor in adults and areextremely heterogeneous in terms of imaging appearanceand in their response to therapy. They are infiltrative lesionswith poorly defined margins on both T1- and T2-weightedimages (36–39). The prognosis varies significantly with tumorgrade, ranging from a median survival of 7–10 years for grade2 lesions, 2–4 years for grade 3 lesions, and � 1 year forgrade 4 lesions (1, 2). Definition of grade is based uponhistological analysis of tissue samples obtained by biopsy orduring surgical resection (8, 9). Because it is common forthere to be regions of different tumor grade within the samelesion, directing the surgeon to the region that is likely to beof highest grade is critical to obtain representative samplesfor histological analysis. Although a tumor is known to beoutside the lesion as well, the enhancing lesion is widelyused as the target for surgery resection or for planning ra-diation therapy (11).

As can be seen in Fig. 2, grade 2 gliomas are typicallynonenhancing after injection of Gadolinium. They are iden-tified as a region of hypointensity on T1-weighted imagesand hyperintensity on T2-weighted lesions. Grade 3 glio-mas have large regions of hypointensity on T1-weightedimages but may also have regions in which the blood brainbarrier is compromised and which therefore appear brighton postcontrast T1-weighted images. Although grade 4gliomas may also be nonenhancing, it is more common forthem to have substantial regions of Gadolinium enhance-ment with a central area of hypointensity that correspondsto necrosis. Higher doses of Gadolinium do improve thevisibility of the enhancing lesion and heavily T2-weightedfluid attenuated inversion recovery images contribute todistinguishing regions of edema and nonenhancing tumorfrom cerebrospinal fluid and cysts (36 –39). Despite thewidespread use of MRI for assessment of gliomas, thereare many circumstances where the data are ambiguous interms of defining tumor margins and in distinguishingtreatment-induced necrosis from recurrent tumor. It is withthese difficulties in mind that 1-H MRSI has been pro-posed as a technique that can add to the evaluation andcharacterization of these lesions (40 –51).

Fig. 2. Post-Gadolinium T1-weighted images from patients with newly diagnosed gliomas. The top row are grade 2 lesions, the middle row are grade 3lesions, and the bottom row are grade 4.

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Methods for Obtaining Multivoxel 1-H MRSIThe most straightforward method for generalizing singlevoxel MR spectroscopy is to select a larger volume of inter-est and then apply phase encoding to obtain localization toa one-, two-, or three-dimensional array of voxels (52).PRESS or stimulated echo acquisition mode (STEAM) are thetwo most common methods used for volume selection, withPRESS being preferred when the echo time allows becauseof its intrinsically higher signal to noise ratio. An advantage ofthis approach is that the volume can be selected to eliminateas much of the s.c. lipids as possible and to avoid regionslikely to cause large variations in susceptibility such as thesinuses. This permits improved shimming and providesspectra with narrower peaks and higher signal to noise (46–51). The advantage of obtaining a two-dimensional or three-dimensional array of spectra is that it is possible to observenot only heterogeneity within the lesion but to examine sur-rounding tissue that may appear normal on MRI. This pro-vides a reference for comparing metabolite levels in thetumor and makes it possible to identify regions of abnormalmetabolism outside the morphological lesion (47–50). Fortreatment planning and long-term follow-up, it is necessaryto evaluate tumor progression, and it is critical to obtainthree-dimensional coverage of a large volume of interest.

Most of the studies that have been performed to date haveused echo times of 144 or 270 ms, which provide spectradominated by five different metabolite peaks: choline; crea-tine; N-acetylasparatate; lactate; and lipid (46, 47). The cho-line peak includes a number of different choline-containingcompounds and reflects membrane synthesis and turnover.Creatine is important in cellular energetics, whereas N-acety-laspartate is a neuronal marker. Lactate reflects anaerobicmetabolism, and lipids are observed in regions of cellularbreakdown caused by necrosis. Fig. 3 shows examples ofspectra from normal brain tissue, necrosis, and regions fromdifferent types of brain tumors. The normal brain has N-acetylaspartate that is approximately twice the intensity ofcholine and creatine. Tumor generally has decreased N-

acetylaspartate and increased choline and variable levels ofcreatine. Peaks corresponding to lactate and lipid may bepresent in regions of necrosis for both metastatic and pri-mary brain tumors (47). Because the nominal voxel size for avolume head coil at 1.5 T is 1 cc, individual voxels maycontain a mixture of tumor, necrosis, and normal brain tissue.

Although it possible to obtain three-dimensional 1-H MRSIdata with chemical shift selective water suppression andconventional volume selection radiofrequency pulses, thereare many circumstances where the water and lipid suppres-sion are inadequate and compromise the quality of the dataobtained. This is especially true for patients who have hadsurgical resection and can be a severe problem for patientsthat are treated by brachytherapy using permanent radioac-tive seeds. To improve the quality of water suppression, it ispossible to implement alternative radiofrequency pulses thatare able to provide improved spatial and frequency selection(53, 54). Another critical tool for obtaining full coverage of thelesion and for sharpening the edges of the selected volumehas been the implementation of very spatially selective sat-uration bands (55). These have a very sharp transition bandand can be applied parallel to the edges of the selectivevolume to make it more cubic in shape or at an obliqueorientation to conform the volume to the anatomy.

Other approaches for obtaining volumetric coverage of thelesion are to use multislice and multiple echo time techniquesfor providing spatial localization in a time effective fashion(56–58). In this case, lipid suppression has typically beenprovided by spatial and frequency selective pulses, inversionrecovery, and spatial saturation pulses. These techniqueshave the advantage of obtaining complete in plane coveragebut may be limited close to the sinuses or surgery cavitiesbecause of susceptibility artifacts. For multislice acquisi-tions, it is necessary to have a slice gap to avoid cross-talk,and two acquisitions are required to provide complete cov-erage of the lesion. Another strategy for obtaining volumetriccoverage of the brain with a reasonable acquisition time is touse echo planar spectroscopic imaging with either oscillating

Fig. 3. Spectra from normalbrain tissue, brain metastases,necrosis, and gliomas of differ-ent grades. These spectra areselected from arrays of three-dimensional 1-H MRSI datasetswith a nominal spatial resolutionof 1 cc, echo time TE � 144 ms,repetition time TR � 1 s, andtotal acquisition time for the spa-tial array of spectra was 17 min.

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gradients in one spatial dimension or spiral sampling within agiven plane (59–61). This has been shown to provide gooddata quality for normal volunteers and patients with neuro-degenerative diseases but may be limited for patients withbrain tumors once they have undergone surgical resection.Future studies are expected to use a hybrid PRESS-echoplanar spectroscopic imaging technique with spatially selec-tive saturation bands that allow greater k-space coveragebut eliminate signals from regions that are likely to causesusceptibility artifacts.

Reconstruction and Postprocessing of 1-HMRSI DataThe reconstruction of 1-H MRSI data and analysis of theresulting arrays of spectra combines fourier transforms andapodization with automated methods of spectral processingto provide data that can be interpreted by visual inspection orquantified to generate maps of the spatial distribution ofdifferent metabolites (62). The first step is to apply an apo-dization function to the k-space-free induction decays andperform a fourier transform to produce k-space spectra. Thenext step is to reconstruct the spatial dependence of thedata. For spiral or irregular k-space sampling, the approachis to first re-grid the k-space data onto a rectangular array(59–61). For conventional phase encoding, this step is un-necessary. To center the data at the most appropriate spatiallocation, it is possible to phase-weight the k-space array withthe appropriate voxel shift. This is followed by applying anyrequired spatial apodization and then performing the spatialfourier transformations. The resulting array of spectra willtypically have spatially dependent frequency and phase er-rors that need to be corrected, as well as baseline variationsbecause of residual water.

Numerous methods for estimating frequency, phase, andbaseline corrections for spectral data have been reported inthe literature (63–69). Characteristics of the 1-H MRSI datathat guide the choice of methodology are the larger numberof spectra that need to be considered, and the need forwhatever method is chosen to be robust to differences insignal to noise and peak configurations corresponding todifferent tissue types. One approach is to acquire a separatedataset with no water suppression (64). This is time consum-ing, but the high signal to noise of the water resonanceallows for an accurate estimate of frequency and phaseparameters. Provided that the data acquisition window istimed correctly, there should be no need for frequency-dependent phase correction, and the phase of the water ineach voxel should be the same as for the other metabolites.

An alternative to acquiring a separate water referencedataset is to deliberately limit the water suppression to leavebehind a relatively large water peak in the spectrum. Theaccuracy of this approach depends upon the quality of thevolume selection and out of voxel suppression because in-complete suppression of water outside the excited volumemay cause spurious peaks with different frequency andphase to be folded into the selected volume. Another strat-egy is to make use of prior knowledge of possible peaklocations (69), obtain estimates of corrections from metab-olite peaks in voxels that have sufficient signal to noise, and

then apply spatial interpolation to fill in corrections for voxelswith low signal to noise (62). This provides arrays of phasedand frequency referenced spectra for visual correlation withthe anatomy as shown in Figs. 4–7.

More quantitative analysis of the data requires the estima-tion of peak locations, heights, and areas. Prior knowledge ofrelative peak locations is valuable for performing this analysisand provides the basis for a robust method that identifiesstatistically significant peaks, determines peak heights, andcalculates peak areas by integration within a defined range offrequencies for each metabolite. Additionally, more sophis-ticated fitting algorithms can be applied to spectra that havesufficient signal to noise for the optimization routines to bereliable (e.g., 69). The output of the analysis is a number ofspatial maps of metabolite parameters that can be applied toidentify regions of normal and abnormal metabolism. Asindicated in a previous publication (62), additional correc-tions for spatial variations in intensity caused by the dataacquisition procedures may also be required if comparingrelative intensities of metabolites such as choline, creatine,N-acetylaspartate, lactate, and lipid.

Our studies have indicated that the relative increase incholine and decrease in N-aceylasparate is critical for defin-ing the spatial extent of the metabolic abnormality corre-sponding to active tumor. We have developed an index forclinical applications, termed the CNI, that describes thisquantity and can be derived automatically from a given 1-HMRSI dataset without reference to the anatomical images(70). The CNI is a statistical quantity that is normalized by therange of metabolite levels in normal tissue and can be usedto infer the probability of each voxel that is abnormal. Notethat this analysis cannot guarantee that the abnormality isattributable to tumor in a randomly selected population be-cause other pathologies may also result in increased cholineand decreased N-acetylasparate. However, it does providean objective method for highlighting regions that have spec-tral characteristics consistent with tumor. The differences inCNI with tumor grade and correlation with histology aresummarized in recent publications (70–73).4 Similar indicescan be defined to represent the regions with abnormal cho-line relative to creatine and abnormal creatine relative toN-acetylaspartate.

Differences in MRI and Metabolic LesionsA critical question for using 1-H MRSI for evaluation of braintumors is whether the spatial extent of the metabolic lesionis different from the Gadolinium-enhancing region and hy-perintensity on T2-weighted images (47). If there is no dis-tinction between these lesions, there may be no added valuefor the 1-H MRSI data over and above conventional MRimages. For metastases, the focus is on whether it is possibleto distinguish between regions of tumor and enhancing ne-crosis. In practice, it is difficult to get definitive evidencebecause it is rare for such lesions to be biopsied. Evaluation

4 I. Catalaa, R. G. Henry, W. P. Dillon, E. Graves, T. McKnight, Y. Lu, D. B.Vigneron, and S. J. Nelson. Perfusion, diffusion and spectroscopy valuesin newly diagnosed cerebral gliomas, submitted for publication.

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of whether a lesion corresponds to active tumor is typicallybased on whether it subsequently gets larger on Gadolinium-enhanced MRI. Another complication is that as the lesiongets larger, it forms central necrosis and, with a voxel size of1–2 cc, it is difficult to obtain spectra free from partial vol-uming of tumor and necrosis. In a study of 18 patients withbrain metastases that were treated with gamma knife radio-surgery, we found that all but two of the lesions had de-creased N-acetylasparate, as well as a peak correspondingto lactate or lipid. Of the lesions that were followed aftertreatment, all lesions that showed decreases in the volume ofthe enhancing lesion also showed reduction in lactate, lipid,and choline peaks. There were also three lesions thatshowed reduced metabolism but had stable or slightly in-creasing volume. Lesions that showed increased enhance-ment on long-term follow-up also had a corresponding in-crease in choline and lactate or lipid peaks (47). From thisstudy, it appears that the MRSI can provide additional con-fidence in as to whether lesions are responding to therapyand in some cases may give information that is not presentin anatomical images.

The situation is more complex for patients with gliomas asthere is the need to separate tumor from necrosis and todistinguish nonenhancing tumor from edema and treatmenteffects. To evaluate the feasibility of using 1-H MRSI in this

manner, we have looked at the differences in anatomical andmetabolic lesions in patients with newly diagnosed gliomaswho had been scanned before surgical resection (50, 51,71–73)4. The goal was to determine how many of theselesions were enhancing and had the voxel with most abnor-mal metabolic signature (maximum CNI) outside the enhanc-ing volume. Of 46 grade 2 lesions, 13% were enhancing and95% had their maximum CNI in the nonenhancing region ofthe T2 lesion. The mean and the median of the maximum CNIin each lesion were both 6.9. It was much more common forthe grade 3 lesions to be enhancing than for the grade 2lesions, with 23% considered as weakly enhancing and 38%fully enhancing. The location of the maximum CNI was innonenhancing tissue for 83% of the lesions, the medianmaximum CNI was 7.1 and the mean maximum CNI was 8.0.For the 31 grade 4 patients that were studied, 75% hadvisible regions of macroscopic necrosis and all of them hadenhancing regions. There was a large variation in the maxi-mum CNI within each lesion and, although the median valuewas 6.9, there were some lesions with very high CNIs so thatthe mean value was 9.4. Fig. 5 shows examples of grades 2,3 and 4 gliomas with regions having abnormal CNI highlighted.It is clear from these types of studies that the Gadoliniumenhancement does not usually correspond to the region withhighest choline. Another interesting finding was that the region

Fig. 4. Correlation of 3-D 1-H MRSI data with the anatomy as depicted by a post-Gadolinium T1-weighted image with superimposed grid correspondingto the spectral array. These data are from a patient with a melanoma metastasis and show two axial slices from the dataset. The nominal spatial resolutionof the data were 1cc, echo time TE � 144 ms, repetition time TR � 1 s and total acquisition time was 17 min.

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with abnormal CNI was typically only a subset of the T2 lesion.In some cases this was because of low metabolite levels andpresumably represented necrosis, in others it was because ofnormal appearing spectra being within the T2 lesion (73). Thesefindings support the hypothesis that 1-H MRSI is able to definethe spatial extent of active tumor for patients with gliomas andimplies that 1-H MRSI is likely to be critical for directing biopsiesor surgical resection, planning focal therapy, and evaluatingtumor burden.

Potential for Tumor GradingGiven the differences in spatial extent of metabolic and an-atomical lesions, the question arises as to whether the met-abolic data are able to contribute to defining tumor type andgrade. In a study that used two-dimensional 1-H MRSI, Preulet al. (34) found an excellent classification of patients using amultivariate pattern recognition analysis of peaks corre-sponding to choline, creatine, N-acetylasparate, lactate,lipid, and alanine. From looking at the metabolite levels ineach class, it was clear that meningiomas were distinguishedas they were the only lesions that had alanine. Grade 2gliomas tended to have low lactate and lipid, some N-acety-laspartate, and some creatine. Grade 3 gliomas tended tohave low lactate and lipid, less N-acetylaspartate and crea-

tine, with higher choline. Grade 4 gliomas tended towardhigh lactate and lipid, with very low N-acetylaspartate. Al-though these results were very promising, there has not yetbeen a prospective study using the statistical classificationthat these authors derived.

One of the complications in analyzing data obtained with amultivoxel data acquisition technique is in determining whichspectrum to consider for each lesion. Suggestions that havebeen made include using the most abnormal voxel and theaverage of all voxels within the lesion. Both of these ap-proaches involve a subjective decision that takes the ana-tomical appearance of the lesion into account. For example,does the lesion include the entire T2 abnormality or is itrestricted to the enhancing volume. As seen in Fig. 5, thespectral characteristics of these regions may be quite differ-ent (72). The same issue is present with single voxel analysis,but in that case, the decision is made implicitly at the time ofdata acquisition by the choice of the selected volume. Ourstudies have suggested that although it may be possible todetect mean differences between populations of gliomaswith different grades based upon metabolite levels, there isconsiderable overlap, both for mean metabolite levels or forthe most abnormal voxels within the T2 lesion (72).4 Becausethere are such large variations in anatomical appearance, it

Fig. 5. Arrays of spectra from grade 2 (left), grade 3 (middle), and grade 4 (right) gliomas. The acquisition parameters were as in Fig. 4. Note theheterogeneity of the spectral patterns in these lesions. Spectra that have metabolic abnormalities are shaded, and those with peaks corresponding to lactateor lipid are marked with a “�”.

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seems likely that both anatomical and metabolic patterns arerelevant for classification and that which ever procedure isconsidered should ensure that the influence of both types ofdata are explicitly considered in the analysis. Informationsuch as relative cerebral blood volume or apparent diffusioncoefficient may also help in grading tumors and in distin-guishing between tumors and other types of mass lesions.4

Potential for Evaluating Response to TherapyAnother potentially important clinical role for 1-H MRSI is theability to make an early evaluation of whether a lesion hasresponded to therapy. If this were possible, it would allowtailoring therapy to each individual patient and modifying anineffective treatment strategy before the lesion shows a largeincrease in volume. It would also be possible to avoid givingunnecessary treatment in the case that an increase in en-hancing volume is attributable to formation of treatment-induced necrosis as opposed to recurrent or residual tumor.For 1-H MRSI to be included in the clinical management ofthe patient in this manner, it is important to map out both thetemporal and spatial distribution of metabolite changes inresponse to the therapy of interest. This requires the use ofthree-dimensional 1-H MRSI and is most easily achieved forthe case of focal therapies such as surgery or radiation (74).Registration of the MR images and 1-H MRSI data are criticalfor correlating data from such sequential examinations.

We have already presented some of our results for gammaknife radiosurgery of metastatic lesions. To study this appli-cation for gliomas requires a consideration of whether thetreatment volume covered the metabolic lesion, as well ashow the lesion responded to therapy. It is clear from ouranalysis of data from 36 patients with recurrent gliomas thatthe Gadolinium-enhancing lesion is not an adequate targetfor gamma knife radiosurgery in at least 50% of the recurrentgrade 3 and grade 4 lesions that were considered (48, 49).Patients for whom the metabolic lesion extended outside thegamma knife target had a larger increase in enhancing vol-ume 6 months after therapy, shorter time to additional treat-ment and worse survival than patients with either no meta-bolic lesion or a with a metabolic lesion contained within thetarget (48). Fig. 6 shows an example of the time course ofresponse to gamma knife radiosurgery for a patient who hada relatively small initial lesion that was inside the target. Theanatomical and metabolic lesion shrunk by the first follow-upscan at 2 months after therapy and shrunk additionally by 8months after treatment. The changes in the metabolic lesionwere a reduction in choline and increase in N-acetylaspar-tate. The latter was interpreted as being because of thereturn of normal brain tissue into the voxel as the tumorshrunk.

Fig. 7 shows an example of a patient who had a muchlarger metabolic than anatomical lesion before radiosurgery.

Fig. 6. Sequential changes in spectra for a patient with a recurrent grade 3 glioma, which was treated with gamma knife radiosurgery to the enhancingvolume. In this case, the metabolic lesion was restricted to the treated volume. The examinations were obtained before treatment, 2 and 8 months aftertreatment. Note the reduction in volume of the anatomical lesion and of choline in the treated voxels.

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The target addressed only a few abnormal voxels in thecenter of the metabolic lesion. Two months after therapy, thecholine had not changed significantly inside the target, butthere was an increase in a resonance corresponding to lac-tate or lipid. The voxels outside the irradiated region did notchange. Three months after therapy, the choline had de-creased inside the target and the lactate/lipid had increasedadditionally. The Gadolinium-enhancing region increased involume at both time points, and hence, the treatment wasconsidered to have failed. If we had used the metabolitelevels as indicators of response, the treatment would havebeen classified as having some effect within the target re-gion. Similar findings were observed in patients being treatedwith brachytherapy (46). For fractionated radiation therapy,where the treated volume is much larger and the dose dis-tribution more variable, it is necessary to take into accountchanges in the normal appearing brain tissue caused byintermediate doses of radiation, as well as the changeswithin the tumor (74).

ConclusionsFrom the studies that have been performed thus far, it is clearthat 1-H MRSI is an important adjunct to anatomical imagingfor evaluation of tumor type and grade, as well as for target-

ing and evaluating response to therapy. Although the prog-nostic value of this technique is still under investigation, thereis every reason to expect that it will provide information thatwill be relevant for choosing the most appropriate therapy forindividual patients and for understanding the mechanisms ofsuccess and failure of new treatments. This is particularlycritical for screening therapies based upon the biologicalproperties of the tumor, where it is important to knowwhether the lack of response was because of the agent beingunable to access the tumor or to the lesion being insensitiveto that particular approach. Possibilities for improving thesensitivity and specificity of the 1-H MRSI data include theuse of shorter echo times, the application of radiofrequencycoils with improved signal to noise and of magnets withhigher field strength.

AcknowledgmentsI thank Tracy McKnight, Edward Graves, Andrea Prizkall, Xiaojuan Li,Isabelle Catalaa, and Daniel Vigneron for their contributions to the workpresented here.

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Fig. 7. Sequential changes in spectra for a patient with a recurrent grade 4 glioma, which was treated with gamma knife radiosurgery to the enhancingvolume. The examinations were obtained before treatment, 2 and 3 months after treatment. In this case, there were numerous voxels outside the target thathad abnormal metabolism. Note the reduction of choline in the treated voxels but stable or slightly increasing choline outside the target volume. Althoughthe enhancing volume dose increased after therapy, it is still smaller than the metabolic lesion.

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