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Microscope components and diffraction

Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

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Page 1: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Microscope components and diffraction

Page 2: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

• Last class• Imaging• Absorption• Reflection

• This class• Components of a microscope• Diffraction

Page 3: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Anti-reflection coatings

Even at normal incidence, glass reflects ~4% of light

Apply coating with n in between air and glass

One coat of proper index takes reflection 4% -> 2%Set thickness = λ/4

Page 4: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Real world anti-reflective coatings

Page 5: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Microscope components

Page 6: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Parts of a microscope

Light source

Collector Condenser

Objective

Eyepiece

Image

Camera

Page 7: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Objectives are the most expensive, therefore most important component

Primary image forming opticSet resolution limits downstreamRequired to be small

Metrics for objectives:- Numerical Aperture- Magnification- Field number- Immersion medium- Aberration correction- Working distance- Depth of focus- Transmission

All of these things will contribute to image quality

Objective CFI S Fluor20Xremove

Image

Type Super Fluor

Primary Technique Brightfield

Price $$$$

Immersion Air

Magnification 20X

Numerical Aperture 0.75

Working Distance 1

Cover Glass Thickness 0.17

Page 8: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Condensers

Concentrate light into a cone that can be adjusted with an iris

Brighter, higher resolution Dimmer, higher contrast

Page 9: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Eye pieces

• Typically come in 10-20x• Don’t believe that things can

get to 1200x magnification, high mag, just blurry

Eye pieces look at an image formed in the microscope

More money gets you slightly better eyepieces

Page 10: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Cameras – two flavors

• CCD vs CMOS

Page 11: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Inverted vs upright

Trans vs epi illumination

Page 12: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Diffraction – Yet another property of waves

Page 13: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Diffraction

Page 14: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Single slit diffraction

Page 15: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Multi-slit diffraction

Light needs to recombine to form image

Page 16: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

Physical basis for diffraction• Hyugen’s principle• A plane wave is made

up of interfering spherical waves

Page 17: Microscope components and diffractionjokr7175/docs/Lesson 6.pdf · Microscope components and diffraction • Last class • Imaging • Absorption • Reflection • This class •

On to Matlab…