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Department of Molecular Biology and Genetics Membrane transporters in neuroscience and drug discovery – Nissen laboratory Section of Structural Biology Gustav Wieds Vej 10C Contact: Poul Nissen, [email protected] BACKGROUND/OVERVIEW The Nissen group investigates molecular mechanisms of membrane transport processes and biomembrane structure. Activities are mainly focused on cryo-electron microscopy (Cryo-EM), protein crystallography, biochemistry, electrophysiology, and include also small-angle X-ray scattering and cryo-electron tomography. Main subjects of research concern membrane transporters involved with neurological and psychiatric disorders, i.e. P-type ATPase (Na,K-ATPase, Ca-ATPases, lipid flippases) and Na + dependent transporters, but include also structure based drug discovery, protein engineering, and biomembrane suprastructures of neurons. Research Areas: Membrane proteins, Membrane transport, Electron microscopy, Crystallography, Biochemistry, Drug discovery, Tomography + Cloning Expression Bacteria Yeast Mammalian cells Purification Workflow Current research projects – incl. student projects Ca2+-ATPases Crystallography Sarco/Endoplasmic Reticulum Ca-ATPase (SERCA) Neutron crystallography Regulation by histidine rich protein Plasma membrane Ca-ATPase (PMCA) Structural and functional characterization of isoforms Regulation by lipids, autoinhibition & α-synuclein Calcium signalling Electron microscopy Neuronal ultrastructure CryoEM studies of membrane protein complexes from neurons (axon initial segment, dendritic spines, synapses) Characterization of the axon initial segment by tomography FRMD7 J Neurosci 2018, 38:2135 Na,K-ATPase AHC RDP CAPOS Structural and functional studies of mutations causing rare neurological disorders (A lternating h emiplegia of c hildhood, CAPOS) Structural characterization of isoforms Functional characterization Phospholipid flippases / P4- and P5-ATPases Lipid flippases Lysosomal defects Structural and functional characterization of yeast and mammalian pumps Substrate identification Mechanism of auto-inhibition Na-symporters Structure determination of Na-K-Cl cotransporters and Na/neurotransmitter symporters Na+ dependent transporters NKCC1, GlyT1 Drug discovery Drug discovery in neurological / neurodegenerative disorders Data processing/modelling 3.1 Å resolution cryo-EM structure Receptors, mechano-sensation Sodium-dependent phosphate transporters: functional and structural characterisation of dimerisation Disease mutant forms of pumps such as Na,K-ATPase and Ca2+-ATPases and interaction sites for toxic amyloids form potential targets for drug discovery than can be revealed by structural studies Compound screening for the potential treatment of Wilson’s disease (Cu- ATPase) 116kDa α 66 45 β 35 25 14 FXYD α1β1 α2β3 - Eluted fractions DANDRfTE - - NORD IC EMBL PARTNERSH IP FOR MO LECULAR MED ICINE - - - - Better lives through BRAINSTRUC new knowledge - Danish Research Institute of Translational Neuroscience Nord ic E MB L Partnership for l~olecular Medici ne -- A a,oa h~ ook --·-· ., .,,.,,~~, .. I ·" . "' '"=' . M, ,, •. .,_ PRO MEMC> CEN T SR FOR PROTEINS IN MEMORY NORDIC EMBL PARTNERSHIP FOR MOLECULAR MEDICINE """"'"" _, """"rue,= rn ""''"'~ _..,,, ..... """'"'' J; .,.,,., .. , ...-. ~"'"~ """'"' •· "'""' '~' ,r ,, ... .., ,,_,, _ ,, ,, ) '""' "'"' "' "' "" x ,.m ,- . "" ·' '"'"' - 0 ,4 AAR HUS UN I VERS I TY - www.dandrite.au.dk

Membrane transporters in neuroscience and drug discovery · 2020. 9. 2. · The Nissen group investigates molecular mechanisms of membrane transport processes and biomembrane structure

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  • Department of Molecular Biology and Genetics

    Membrane transporters in neuroscience and drug discovery – Nissen laboratory

    Section of Structural Biology Gustav Wieds Vej 10C Contact: Poul Nissen, [email protected]

    BACKGROUND/OVERVIEW The Nissen group investigates molecular mechanisms of membrane transport processes and biomembrane structure. Activities are mainly focused on cryo-electron microscopy (Cryo-EM), protein crystallography, biochemistry, electrophysiology, and include also small-angle X-ray scattering and cryo-electron tomography. Main subjects of research concern membrane transporters involved with neurological and psychiatric disorders, i.e. P-type ATPase (Na,K-ATPase, Ca-ATPases, lipid flippases) and Na+ dependent transporters, but include also structure based drug discovery, protein engineering, and biomembrane suprastructures of neurons. Research Areas: Membrane proteins, Membrane transport, Electron microscopy, Crystallography, Biochemistry, Drug discovery, Tomography

    +

    Cloning

    Expression

    Bacteria

    Yeast

    Mammalian cells

    Purification

    Workflow Current research projects – incl. student projects

    Ca2+-ATPases

    Crystallography

    Sarco/Endoplasmic Reticulum Ca-ATPase (SERCA) Neutron crystallography Regulation by histidine rich protein

    Plasma membrane Ca-ATPase (PMCA) Structural and functional characterization of isoforms Regulation by lipids, autoinhibition & α-synuclein Calcium signalling

    Electron microscopy

    Neuronal ultrastructure • CryoEM studies of membrane protein

    complexes from neurons (axon initial segment, dendritic spines, synapses)

    • Characterization of the axon initial segment by tomography

    • FRMD7

    J Neurosci 2018, 38:2135

    Na,K-ATPase

    AHC RDP CAPOS

    • Structural and functional studies of mutations causing rare neurological disorders (Alternating hemiplegia of childhood, CAPOS)

    • Structural characterization of isoforms

    Functional characterization

    Phospholipid flippases / P4- and P5-ATPases

    • Lipid flippases • Lysosomal defects • Structural and functional characterization

    of yeast and mammalian pumps • Substrate identification • Mechanism of auto-inhibition

    Na-symporters • Structure determination of Na-K-Cl

    cotransporters and • Na/neurotransmitter symporters

    Na+ dependent transporters • NKCC1, GlyT1

    Drug discovery

    • Drug discovery in neurological / neurodegenerative disorders

    Data processing/modelling

    3.1 Å resolution cryo-EM structure

    Receptors, mechano-sensation

    • Sodium-dependent phosphate transporters: functional and structural characterisation of dimerisation

    • Disease mutant forms of pumps such as Na,K-ATPase and Ca2+-ATPases and interaction sites for toxic amyloids form potential targets for drug discovery than can be revealed by structural studies

    • Compound screening for the potential treatment of Wilson’s disease (Cu-ATPase)

    116kDa α

    66 45 β35 25

    14 FXYD mM KCl

    α1β1 α2β3

    -

    Eluted fractions

    DANDRfTE

    -

    -

    NORDIC EMBL PARTNERSH IP FOR MOLECULAR MEDICINE

    - - - -

    Better lives through BRAINSTRUC new knowledge

    -

    Danish Research Institute of Translational Neuroscience Nord ic EMB L Partnership fo r l~olecular Medic ine

    - -

    A a,oa h~ook

    --·-· . ,.,,.,,~~, .. I ·" ."' '"=' . M, ,, •. .,_

    PRO MEMC> CEN TSR FO R PROTEINS IN MEMORY

    NORDIC EMBL PARTNERSHIP FOR MOLECULAR MEDICINE

    """"'"" _,

    """"rue,= rn""''"'~ _..,,, ..... """'"'' J;

    .,.,,., .. , ...-.~"'"~ ~ """'"' • ·"'""''~' ,r,, ... .., ,,_,,_,,,, ) '""' " '" '"' ~ "'"" x ,.m,-• . ""·''"'"'

    - 0 ,4

    AARHUS UNIVERSITY - www.dandrite.au.dk

    www.dandrite.au.dkmailto:[email protected]

  • □ □ □ □ ••• • •

    • • • • •••

    novo nordisk fonden

    lloehrfffger- ri'\geffie1m Fo'ncfsl Wfttilisr.f_dr meiftiihls.'ch:e ~ru.nd.la_geofom:huJJ,g ____ ...... --,"'"'"-

    /nnovationsfonden

    Structural neurobiology – Nissen group

    Professor Poul Nissen

    P4- and P5-ATPases Neuronal ultrastructure Lipid flippases, lysosomal function Axon initial segment, synapses, K2P

    Joseph Lyons Esben Quistgaard Ronja Driller Michael Clausen Milena Timcenko Josephine D. Nissen Thibaud Dieudonné Simon Rolighed Line Marie Christiansen

    Amalie B. Poulsen Michelle J. Laursen Ca2+-ATPases Carl Helmer PMCA/α-synuclein, SERCA, calcium signaling

    Na,K-ATPase Antoni Kowalski Alternating Hemiplegia of Childhood Sigrid T. Larsen

    Michael Habeck Sara Basse Hansen Mads Christiansen Samuel Hjort-Jensen Marlene Fruergaard Line C. Hansen Sabrina Krepel

    Na+ dependent transporters Receptors, mechanosensation NKCC1, DAT, GlyT1 InsR, sortilins, FRMD7/syndecan

    Caroline Neumann Sofia Trampari Jeppe A. Nielsen Azadeh Shahsavar Charlott Stock

    Rasmus K. Flygaard (Sep. 2020)

    Postdocs Senior researchers Graduate students Bsc students

    2021-22: recruiting 4 PhD students

    Deep learning image analysis (cryo-EM)

    Jonathan Juul

    Research assistants and technicians Anna Marie Nielsen Tanja Klymchuk Søren Brag

    Christine J. F. Nielsen Dorthe Strandbygaard Bente Andersen

    Administration and accounting Karen Bech-Pedersen Personal assistent

    Lene Høgenhof Kristensen Accounting

    Fellowships

    Slide Number 1Structural neurobiology – Nissen group